Multiple sequence alignment - TraesCS1A01G444000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G444000 chr1A 100.000 2735 0 0 1 2735 592093538 592090804 0.000000e+00 5051.0
1 TraesCS1A01G444000 chr1A 86.641 262 28 5 449 707 56606678 56606935 1.600000e-72 283.0
2 TraesCS1A01G444000 chr1A 99.180 122 1 0 1978 2099 592091521 592091400 1.270000e-53 220.0
3 TraesCS1A01G444000 chr1A 99.180 122 1 0 2018 2139 592091561 592091440 1.270000e-53 220.0
4 TraesCS1A01G444000 chr1A 98.780 82 1 0 1978 2059 592091481 592091400 2.190000e-31 147.0
5 TraesCS1A01G444000 chr1A 98.780 82 1 0 2058 2139 592091561 592091480 2.190000e-31 147.0
6 TraesCS1A01G444000 chr1A 97.619 42 1 0 1978 2019 592091441 592091400 3.780000e-09 73.1
7 TraesCS1A01G444000 chr1A 97.619 42 1 0 2098 2139 592091561 592091520 3.780000e-09 73.1
8 TraesCS1A01G444000 chr1B 87.837 1225 63 28 723 1905 686846832 686845652 0.000000e+00 1358.0
9 TraesCS1A01G444000 chr1B 91.111 630 26 14 2112 2735 686844206 686843601 0.000000e+00 826.0
10 TraesCS1A01G444000 chr1D 87.593 1209 51 38 723 1905 493773345 493772210 0.000000e+00 1310.0
11 TraesCS1A01G444000 chr1D 88.621 457 23 10 2266 2719 493769282 493768852 1.870000e-146 529.0
12 TraesCS1A01G444000 chr1D 91.603 131 6 4 2112 2237 493769750 493769620 2.800000e-40 176.0
13 TraesCS1A01G444000 chr7D 88.620 413 45 1 34 446 289267399 289266989 4.070000e-138 501.0
14 TraesCS1A01G444000 chr7B 88.020 409 47 2 34 441 712833653 712833246 1.470000e-132 483.0
15 TraesCS1A01G444000 chr7A 87.317 410 50 1 34 443 330422995 330423402 4.120000e-128 468.0
16 TraesCS1A01G444000 chr7A 86.641 262 28 5 449 707 2005596 2005339 1.600000e-72 283.0
17 TraesCS1A01G444000 chr7A 85.328 259 28 9 449 702 24757168 24756915 2.700000e-65 259.0
18 TraesCS1A01G444000 chr4A 96.512 258 9 0 449 706 141393289 141393546 7.000000e-116 427.0
19 TraesCS1A01G444000 chr4A 85.806 310 35 5 135 443 51378670 51378971 1.220000e-83 320.0
20 TraesCS1A01G444000 chr4A 83.721 172 28 0 218 389 708233173 708233002 2.180000e-36 163.0
21 TraesCS1A01G444000 chr6A 84.058 414 64 2 34 446 501882879 501883291 5.490000e-107 398.0
22 TraesCS1A01G444000 chr3A 85.603 257 27 9 455 707 556350117 556349867 7.510000e-66 261.0
23 TraesCS1A01G444000 chr3A 85.603 257 27 9 455 707 556350746 556350496 7.510000e-66 261.0
24 TraesCS1A01G444000 chr3A 85.214 257 28 9 455 707 556351375 556351125 3.490000e-64 255.0
25 TraesCS1A01G444000 chr3A 85.057 261 28 10 455 711 556352006 556351753 3.490000e-64 255.0
26 TraesCS1A01G444000 chr3A 83.333 270 31 12 449 710 530902869 530902606 1.270000e-58 237.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G444000 chr1A 592090804 592093538 2734 True 847.314286 5051 98.736857 1 2735 7 chr1A.!!$R1 2734
1 TraesCS1A01G444000 chr1B 686843601 686846832 3231 True 1092.000000 1358 89.474000 723 2735 2 chr1B.!!$R1 2012
2 TraesCS1A01G444000 chr1D 493768852 493773345 4493 True 671.666667 1310 89.272333 723 2719 3 chr1D.!!$R1 1996
3 TraesCS1A01G444000 chr3A 556349867 556352006 2139 True 258.000000 261 85.369250 455 711 4 chr3A.!!$R2 256

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
560 561 0.027586 GGATGTAACATTGCCGTCGC 59.972 55.0 0.0 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2273 6460 0.178961 AAGGTTGGTTCCCTTGCCTC 60.179 55.0 0.0 0.0 40.79 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.618019 AATGGCTATCAACTATCTACCTTCA 57.382 36.000 0.00 0.00 0.00 3.02
26 27 6.656632 TGGCTATCAACTATCTACCTTCAG 57.343 41.667 0.00 0.00 0.00 3.02
27 28 5.540337 TGGCTATCAACTATCTACCTTCAGG 59.460 44.000 0.00 0.00 42.17 3.86
28 29 5.775701 GGCTATCAACTATCTACCTTCAGGA 59.224 44.000 0.00 0.00 38.94 3.86
29 30 6.071616 GGCTATCAACTATCTACCTTCAGGAG 60.072 46.154 0.00 0.00 38.94 3.69
42 43 4.764172 CCTTCAGGAGGTATCTTCTGTTG 58.236 47.826 11.24 5.43 44.99 3.33
43 44 4.223923 CCTTCAGGAGGTATCTTCTGTTGT 59.776 45.833 11.24 0.00 44.99 3.32
44 45 4.808414 TCAGGAGGTATCTTCTGTTGTG 57.192 45.455 11.24 0.00 44.99 3.33
45 46 4.416516 TCAGGAGGTATCTTCTGTTGTGA 58.583 43.478 11.24 0.00 44.99 3.58
46 47 4.464244 TCAGGAGGTATCTTCTGTTGTGAG 59.536 45.833 11.24 0.00 44.99 3.51
47 48 4.221703 CAGGAGGTATCTTCTGTTGTGAGT 59.778 45.833 2.73 0.00 40.87 3.41
48 49 4.221703 AGGAGGTATCTTCTGTTGTGAGTG 59.778 45.833 0.00 0.00 0.00 3.51
49 50 4.220821 GGAGGTATCTTCTGTTGTGAGTGA 59.779 45.833 0.00 0.00 0.00 3.41
50 51 5.105146 GGAGGTATCTTCTGTTGTGAGTGAT 60.105 44.000 0.00 0.00 0.00 3.06
51 52 5.728471 AGGTATCTTCTGTTGTGAGTGATG 58.272 41.667 0.00 0.00 0.00 3.07
52 53 5.247110 AGGTATCTTCTGTTGTGAGTGATGT 59.753 40.000 0.00 0.00 0.00 3.06
53 54 6.437477 AGGTATCTTCTGTTGTGAGTGATGTA 59.563 38.462 0.00 0.00 0.00 2.29
54 55 7.039011 AGGTATCTTCTGTTGTGAGTGATGTAA 60.039 37.037 0.00 0.00 0.00 2.41
55 56 7.063544 GGTATCTTCTGTTGTGAGTGATGTAAC 59.936 40.741 0.00 0.00 0.00 2.50
56 57 5.297547 TCTTCTGTTGTGAGTGATGTAACC 58.702 41.667 0.00 0.00 0.00 2.85
57 58 4.955811 TCTGTTGTGAGTGATGTAACCT 57.044 40.909 0.00 0.00 0.00 3.50
58 59 4.631131 TCTGTTGTGAGTGATGTAACCTG 58.369 43.478 0.00 0.00 0.00 4.00
59 60 3.738982 TGTTGTGAGTGATGTAACCTGG 58.261 45.455 0.00 0.00 0.00 4.45
60 61 3.074412 GTTGTGAGTGATGTAACCTGGG 58.926 50.000 0.00 0.00 0.00 4.45
61 62 2.615391 TGTGAGTGATGTAACCTGGGA 58.385 47.619 0.00 0.00 0.00 4.37
62 63 3.181329 TGTGAGTGATGTAACCTGGGAT 58.819 45.455 0.00 0.00 0.00 3.85
63 64 3.587061 TGTGAGTGATGTAACCTGGGATT 59.413 43.478 0.00 0.00 0.00 3.01
64 65 4.042809 TGTGAGTGATGTAACCTGGGATTT 59.957 41.667 0.00 0.00 0.00 2.17
65 66 4.636206 GTGAGTGATGTAACCTGGGATTTC 59.364 45.833 0.00 0.00 0.00 2.17
66 67 4.536090 TGAGTGATGTAACCTGGGATTTCT 59.464 41.667 0.00 0.00 0.00 2.52
67 68 5.724370 TGAGTGATGTAACCTGGGATTTCTA 59.276 40.000 0.00 0.00 0.00 2.10
68 69 6.386927 TGAGTGATGTAACCTGGGATTTCTAT 59.613 38.462 0.00 0.00 0.00 1.98
69 70 6.595682 AGTGATGTAACCTGGGATTTCTATG 58.404 40.000 0.00 0.00 0.00 2.23
70 71 5.765182 GTGATGTAACCTGGGATTTCTATGG 59.235 44.000 0.00 0.00 0.00 2.74
71 72 5.431731 TGATGTAACCTGGGATTTCTATGGT 59.568 40.000 0.00 0.00 0.00 3.55
72 73 5.110814 TGTAACCTGGGATTTCTATGGTG 57.889 43.478 0.00 0.00 0.00 4.17
73 74 4.538490 TGTAACCTGGGATTTCTATGGTGT 59.462 41.667 0.00 0.00 0.00 4.16
74 75 3.933861 ACCTGGGATTTCTATGGTGTC 57.066 47.619 0.00 0.00 0.00 3.67
75 76 3.189606 ACCTGGGATTTCTATGGTGTCA 58.810 45.455 0.00 0.00 0.00 3.58
76 77 3.200825 ACCTGGGATTTCTATGGTGTCAG 59.799 47.826 0.00 0.00 0.00 3.51
77 78 3.200825 CCTGGGATTTCTATGGTGTCAGT 59.799 47.826 0.00 0.00 0.00 3.41
78 79 4.446371 CTGGGATTTCTATGGTGTCAGTC 58.554 47.826 0.00 0.00 0.00 3.51
79 80 3.843619 TGGGATTTCTATGGTGTCAGTCA 59.156 43.478 0.00 0.00 0.00 3.41
80 81 4.080919 TGGGATTTCTATGGTGTCAGTCAG 60.081 45.833 0.00 0.00 0.00 3.51
81 82 4.446371 GGATTTCTATGGTGTCAGTCAGG 58.554 47.826 0.00 0.00 0.00 3.86
82 83 4.162320 GGATTTCTATGGTGTCAGTCAGGA 59.838 45.833 0.00 0.00 0.00 3.86
83 84 5.338381 GGATTTCTATGGTGTCAGTCAGGAA 60.338 44.000 0.00 0.00 0.00 3.36
84 85 4.808414 TTCTATGGTGTCAGTCAGGAAG 57.192 45.455 0.00 0.00 0.00 3.46
85 86 2.497675 TCTATGGTGTCAGTCAGGAAGC 59.502 50.000 0.00 0.00 0.00 3.86
86 87 0.326264 ATGGTGTCAGTCAGGAAGCC 59.674 55.000 0.00 0.00 0.00 4.35
87 88 1.374758 GGTGTCAGTCAGGAAGCCG 60.375 63.158 0.00 0.00 0.00 5.52
88 89 1.666011 GTGTCAGTCAGGAAGCCGA 59.334 57.895 0.00 0.00 0.00 5.54
89 90 0.389166 GTGTCAGTCAGGAAGCCGAG 60.389 60.000 0.00 0.00 0.00 4.63
90 91 0.539669 TGTCAGTCAGGAAGCCGAGA 60.540 55.000 0.00 0.00 0.00 4.04
91 92 0.603569 GTCAGTCAGGAAGCCGAGAA 59.396 55.000 0.00 0.00 0.00 2.87
92 93 0.603569 TCAGTCAGGAAGCCGAGAAC 59.396 55.000 0.00 0.00 0.00 3.01
93 94 0.390472 CAGTCAGGAAGCCGAGAACC 60.390 60.000 0.00 0.00 0.00 3.62
94 95 0.543174 AGTCAGGAAGCCGAGAACCT 60.543 55.000 0.00 0.00 0.00 3.50
95 96 0.108567 GTCAGGAAGCCGAGAACCTC 60.109 60.000 0.00 0.00 0.00 3.85
96 97 0.541998 TCAGGAAGCCGAGAACCTCA 60.542 55.000 0.00 0.00 0.00 3.86
97 98 0.390472 CAGGAAGCCGAGAACCTCAC 60.390 60.000 0.00 0.00 0.00 3.51
98 99 1.079057 GGAAGCCGAGAACCTCACC 60.079 63.158 0.00 0.00 0.00 4.02
99 100 1.079057 GAAGCCGAGAACCTCACCC 60.079 63.158 0.00 0.00 0.00 4.61
100 101 1.827399 GAAGCCGAGAACCTCACCCA 61.827 60.000 0.00 0.00 0.00 4.51
101 102 1.415672 AAGCCGAGAACCTCACCCAA 61.416 55.000 0.00 0.00 0.00 4.12
102 103 1.072505 GCCGAGAACCTCACCCAAA 59.927 57.895 0.00 0.00 0.00 3.28
103 104 0.322546 GCCGAGAACCTCACCCAAAT 60.323 55.000 0.00 0.00 0.00 2.32
104 105 1.886655 GCCGAGAACCTCACCCAAATT 60.887 52.381 0.00 0.00 0.00 1.82
105 106 2.514803 CCGAGAACCTCACCCAAATTT 58.485 47.619 0.00 0.00 0.00 1.82
106 107 2.488153 CCGAGAACCTCACCCAAATTTC 59.512 50.000 0.00 0.00 0.00 2.17
107 108 3.412386 CGAGAACCTCACCCAAATTTCT 58.588 45.455 0.00 0.00 0.00 2.52
108 109 3.821033 CGAGAACCTCACCCAAATTTCTT 59.179 43.478 0.00 0.00 0.00 2.52
109 110 4.278419 CGAGAACCTCACCCAAATTTCTTT 59.722 41.667 0.00 0.00 0.00 2.52
110 111 5.532557 GAGAACCTCACCCAAATTTCTTTG 58.467 41.667 0.00 0.00 41.22 2.77
111 112 5.208121 AGAACCTCACCCAAATTTCTTTGA 58.792 37.500 0.00 0.00 43.71 2.69
112 113 5.840693 AGAACCTCACCCAAATTTCTTTGAT 59.159 36.000 0.00 0.00 43.71 2.57
113 114 6.327365 AGAACCTCACCCAAATTTCTTTGATT 59.673 34.615 0.00 0.00 43.71 2.57
114 115 5.857268 ACCTCACCCAAATTTCTTTGATTG 58.143 37.500 0.00 0.00 43.71 2.67
115 116 4.692155 CCTCACCCAAATTTCTTTGATTGC 59.308 41.667 0.00 0.00 43.71 3.56
116 117 5.287674 TCACCCAAATTTCTTTGATTGCA 57.712 34.783 0.00 0.00 43.71 4.08
117 118 5.678583 TCACCCAAATTTCTTTGATTGCAA 58.321 33.333 0.00 0.00 43.71 4.08
118 119 5.526846 TCACCCAAATTTCTTTGATTGCAAC 59.473 36.000 0.00 0.00 43.71 4.17
119 120 5.528320 CACCCAAATTTCTTTGATTGCAACT 59.472 36.000 0.00 0.00 43.71 3.16
120 121 5.528320 ACCCAAATTTCTTTGATTGCAACTG 59.472 36.000 0.00 0.00 43.71 3.16
121 122 5.759273 CCCAAATTTCTTTGATTGCAACTGA 59.241 36.000 0.00 0.00 43.71 3.41
122 123 6.428771 CCCAAATTTCTTTGATTGCAACTGAT 59.571 34.615 0.00 0.00 43.71 2.90
123 124 7.295201 CCAAATTTCTTTGATTGCAACTGATG 58.705 34.615 0.00 0.00 43.71 3.07
135 136 2.439409 CAACTGATGCAATCTGGACCA 58.561 47.619 0.00 0.00 45.41 4.02
136 137 3.021695 CAACTGATGCAATCTGGACCAT 58.978 45.455 0.00 0.00 45.41 3.55
137 138 4.201657 CAACTGATGCAATCTGGACCATA 58.798 43.478 0.00 0.00 45.41 2.74
138 139 4.082665 ACTGATGCAATCTGGACCATAG 57.917 45.455 0.00 0.00 45.41 2.23
139 140 3.181447 ACTGATGCAATCTGGACCATAGG 60.181 47.826 0.00 0.00 45.41 2.57
140 141 2.157738 GATGCAATCTGGACCATAGGC 58.842 52.381 0.00 0.00 41.17 3.93
141 142 0.918258 TGCAATCTGGACCATAGGCA 59.082 50.000 0.00 0.00 0.00 4.75
142 143 1.496001 TGCAATCTGGACCATAGGCAT 59.504 47.619 0.00 0.00 0.00 4.40
143 144 2.157738 GCAATCTGGACCATAGGCATC 58.842 52.381 0.00 0.00 0.00 3.91
144 145 2.224719 GCAATCTGGACCATAGGCATCT 60.225 50.000 0.00 0.00 0.00 2.90
145 146 3.008375 GCAATCTGGACCATAGGCATCTA 59.992 47.826 0.00 0.00 0.00 1.98
146 147 4.324099 GCAATCTGGACCATAGGCATCTAT 60.324 45.833 0.00 0.00 36.68 1.98
147 148 5.426504 CAATCTGGACCATAGGCATCTATC 58.573 45.833 0.00 0.00 34.16 2.08
148 149 3.445008 TCTGGACCATAGGCATCTATCC 58.555 50.000 0.00 0.00 34.16 2.59
149 150 3.176411 CTGGACCATAGGCATCTATCCA 58.824 50.000 0.00 0.00 34.16 3.41
150 151 3.779183 CTGGACCATAGGCATCTATCCAT 59.221 47.826 0.00 0.00 33.88 3.41
151 152 4.959080 TGGACCATAGGCATCTATCCATA 58.041 43.478 0.00 0.00 34.16 2.74
152 153 5.541775 TGGACCATAGGCATCTATCCATAT 58.458 41.667 0.00 0.00 34.16 1.78
153 154 5.367644 TGGACCATAGGCATCTATCCATATG 59.632 44.000 0.00 0.00 34.16 1.78
154 155 5.604231 GGACCATAGGCATCTATCCATATGA 59.396 44.000 3.65 0.00 34.16 2.15
155 156 6.271857 GGACCATAGGCATCTATCCATATGAT 59.728 42.308 3.65 0.00 34.16 2.45
156 157 7.075851 ACCATAGGCATCTATCCATATGATG 57.924 40.000 3.65 0.52 40.16 3.07
164 165 7.114866 CATCTATCCATATGATGCAGAGTCT 57.885 40.000 3.65 0.00 34.76 3.24
165 166 6.527057 TCTATCCATATGATGCAGAGTCTG 57.473 41.667 16.21 16.21 34.76 3.51
166 167 6.251471 TCTATCCATATGATGCAGAGTCTGA 58.749 40.000 24.55 9.35 34.76 3.27
167 168 5.820404 ATCCATATGATGCAGAGTCTGAA 57.180 39.130 24.55 14.69 32.44 3.02
168 169 5.820404 TCCATATGATGCAGAGTCTGAAT 57.180 39.130 24.55 19.41 31.37 2.57
169 170 5.548406 TCCATATGATGCAGAGTCTGAATG 58.452 41.667 24.55 14.28 28.32 2.67
170 171 4.154375 CCATATGATGCAGAGTCTGAATGC 59.846 45.833 24.55 12.81 40.40 3.56
171 172 3.562343 ATGATGCAGAGTCTGAATGCT 57.438 42.857 24.55 5.31 40.62 3.79
172 173 3.345508 TGATGCAGAGTCTGAATGCTT 57.654 42.857 24.55 7.24 40.62 3.91
173 174 3.682696 TGATGCAGAGTCTGAATGCTTT 58.317 40.909 24.55 0.00 40.62 3.51
174 175 3.439129 TGATGCAGAGTCTGAATGCTTTG 59.561 43.478 24.55 0.00 40.62 2.77
175 176 3.130280 TGCAGAGTCTGAATGCTTTGA 57.870 42.857 24.55 0.00 40.62 2.69
176 177 3.072211 TGCAGAGTCTGAATGCTTTGAG 58.928 45.455 24.55 0.00 40.62 3.02
177 178 3.072944 GCAGAGTCTGAATGCTTTGAGT 58.927 45.455 24.55 0.00 37.00 3.41
178 179 3.501445 GCAGAGTCTGAATGCTTTGAGTT 59.499 43.478 24.55 0.00 37.00 3.01
179 180 4.023365 GCAGAGTCTGAATGCTTTGAGTTT 60.023 41.667 24.55 0.00 37.00 2.66
180 181 5.450171 CAGAGTCTGAATGCTTTGAGTTTG 58.550 41.667 15.46 0.00 32.44 2.93
181 182 5.237996 CAGAGTCTGAATGCTTTGAGTTTGA 59.762 40.000 15.46 0.00 32.44 2.69
182 183 6.002704 AGAGTCTGAATGCTTTGAGTTTGAT 58.997 36.000 0.00 0.00 0.00 2.57
183 184 6.010294 AGTCTGAATGCTTTGAGTTTGATG 57.990 37.500 0.00 0.00 0.00 3.07
184 185 5.533903 AGTCTGAATGCTTTGAGTTTGATGT 59.466 36.000 0.00 0.00 0.00 3.06
185 186 5.628193 GTCTGAATGCTTTGAGTTTGATGTG 59.372 40.000 0.00 0.00 0.00 3.21
186 187 5.300034 TCTGAATGCTTTGAGTTTGATGTGT 59.700 36.000 0.00 0.00 0.00 3.72
187 188 5.904941 TGAATGCTTTGAGTTTGATGTGTT 58.095 33.333 0.00 0.00 0.00 3.32
188 189 5.978919 TGAATGCTTTGAGTTTGATGTGTTC 59.021 36.000 0.00 0.00 0.00 3.18
189 190 4.305989 TGCTTTGAGTTTGATGTGTTCC 57.694 40.909 0.00 0.00 0.00 3.62
190 191 3.243035 TGCTTTGAGTTTGATGTGTTCCG 60.243 43.478 0.00 0.00 0.00 4.30
191 192 3.243068 GCTTTGAGTTTGATGTGTTCCGT 60.243 43.478 0.00 0.00 0.00 4.69
192 193 3.961477 TTGAGTTTGATGTGTTCCGTG 57.039 42.857 0.00 0.00 0.00 4.94
193 194 2.217750 TGAGTTTGATGTGTTCCGTGG 58.782 47.619 0.00 0.00 0.00 4.94
194 195 2.218603 GAGTTTGATGTGTTCCGTGGT 58.781 47.619 0.00 0.00 0.00 4.16
195 196 2.616842 GAGTTTGATGTGTTCCGTGGTT 59.383 45.455 0.00 0.00 0.00 3.67
196 197 3.020984 AGTTTGATGTGTTCCGTGGTTT 58.979 40.909 0.00 0.00 0.00 3.27
197 198 3.066203 AGTTTGATGTGTTCCGTGGTTTC 59.934 43.478 0.00 0.00 0.00 2.78
198 199 2.631160 TGATGTGTTCCGTGGTTTCT 57.369 45.000 0.00 0.00 0.00 2.52
199 200 2.217750 TGATGTGTTCCGTGGTTTCTG 58.782 47.619 0.00 0.00 0.00 3.02
200 201 0.951558 ATGTGTTCCGTGGTTTCTGC 59.048 50.000 0.00 0.00 0.00 4.26
201 202 1.098712 TGTGTTCCGTGGTTTCTGCC 61.099 55.000 0.00 0.00 0.00 4.85
202 203 1.527380 TGTTCCGTGGTTTCTGCCC 60.527 57.895 0.00 0.00 0.00 5.36
203 204 1.527380 GTTCCGTGGTTTCTGCCCA 60.527 57.895 0.00 0.00 0.00 5.36
204 205 0.893727 GTTCCGTGGTTTCTGCCCAT 60.894 55.000 0.00 0.00 33.76 4.00
205 206 0.608035 TTCCGTGGTTTCTGCCCATC 60.608 55.000 0.00 0.00 33.76 3.51
206 207 1.002134 CCGTGGTTTCTGCCCATCT 60.002 57.895 0.00 0.00 33.76 2.90
207 208 1.308069 CCGTGGTTTCTGCCCATCTG 61.308 60.000 0.00 0.00 33.76 2.90
208 209 0.321564 CGTGGTTTCTGCCCATCTGA 60.322 55.000 0.00 0.00 33.76 3.27
209 210 1.457346 GTGGTTTCTGCCCATCTGAG 58.543 55.000 0.00 0.00 33.76 3.35
210 211 0.329261 TGGTTTCTGCCCATCTGAGG 59.671 55.000 0.00 0.00 0.00 3.86
211 212 0.620556 GGTTTCTGCCCATCTGAGGA 59.379 55.000 0.00 0.00 0.00 3.71
212 213 1.213926 GGTTTCTGCCCATCTGAGGAT 59.786 52.381 0.00 0.00 0.00 3.24
213 214 2.439507 GGTTTCTGCCCATCTGAGGATA 59.560 50.000 0.00 0.00 0.00 2.59
214 215 3.117888 GGTTTCTGCCCATCTGAGGATAA 60.118 47.826 0.00 0.00 0.00 1.75
215 216 3.845781 TTCTGCCCATCTGAGGATAAC 57.154 47.619 0.00 0.00 0.00 1.89
216 217 2.763039 TCTGCCCATCTGAGGATAACA 58.237 47.619 0.00 0.00 0.00 2.41
217 218 3.114606 TCTGCCCATCTGAGGATAACAA 58.885 45.455 0.00 0.00 0.00 2.83
218 219 3.135348 TCTGCCCATCTGAGGATAACAAG 59.865 47.826 0.00 0.00 0.00 3.16
219 220 2.173356 TGCCCATCTGAGGATAACAAGG 59.827 50.000 0.00 0.00 0.00 3.61
220 221 2.439507 GCCCATCTGAGGATAACAAGGA 59.560 50.000 0.00 0.00 0.00 3.36
221 222 3.745797 GCCCATCTGAGGATAACAAGGAC 60.746 52.174 0.00 0.00 0.00 3.85
222 223 3.455910 CCCATCTGAGGATAACAAGGACA 59.544 47.826 0.00 0.00 0.00 4.02
223 224 4.080356 CCCATCTGAGGATAACAAGGACAA 60.080 45.833 0.00 0.00 0.00 3.18
224 225 4.878397 CCATCTGAGGATAACAAGGACAAC 59.122 45.833 0.00 0.00 0.00 3.32
225 226 5.338708 CCATCTGAGGATAACAAGGACAACT 60.339 44.000 0.00 0.00 0.00 3.16
226 227 5.152623 TCTGAGGATAACAAGGACAACTG 57.847 43.478 0.00 0.00 0.00 3.16
227 228 3.674997 TGAGGATAACAAGGACAACTGC 58.325 45.455 0.00 0.00 0.00 4.40
228 229 2.673368 GAGGATAACAAGGACAACTGCG 59.327 50.000 0.00 0.00 0.00 5.18
229 230 1.737793 GGATAACAAGGACAACTGCGG 59.262 52.381 0.00 0.00 0.00 5.69
230 231 1.130561 GATAACAAGGACAACTGCGGC 59.869 52.381 0.00 0.00 0.00 6.53
231 232 1.225376 TAACAAGGACAACTGCGGCG 61.225 55.000 0.51 0.51 0.00 6.46
232 233 4.389576 CAAGGACAACTGCGGCGC 62.390 66.667 27.44 27.44 0.00 6.53
233 234 4.927782 AAGGACAACTGCGGCGCA 62.928 61.111 34.06 34.06 36.92 6.09
234 235 4.927782 AGGACAACTGCGGCGCAA 62.928 61.111 35.41 19.05 38.41 4.85
235 236 4.389576 GGACAACTGCGGCGCAAG 62.390 66.667 35.41 28.34 38.41 4.01
247 248 3.711842 CGCAAGCCGCTTTGACGA 61.712 61.111 1.86 0.00 39.08 4.20
248 249 2.870372 GCAAGCCGCTTTGACGAT 59.130 55.556 1.86 0.00 37.77 3.73
249 250 1.512734 GCAAGCCGCTTTGACGATG 60.513 57.895 1.86 0.00 37.77 3.84
250 251 1.911293 GCAAGCCGCTTTGACGATGA 61.911 55.000 1.86 0.00 37.77 2.92
251 252 0.516877 CAAGCCGCTTTGACGATGAA 59.483 50.000 1.86 0.00 34.06 2.57
252 253 0.798776 AAGCCGCTTTGACGATGAAG 59.201 50.000 0.00 0.00 34.06 3.02
253 254 0.037326 AGCCGCTTTGACGATGAAGA 60.037 50.000 0.00 0.00 34.06 2.87
254 255 0.095417 GCCGCTTTGACGATGAAGAC 59.905 55.000 0.00 0.00 34.06 3.01
255 256 1.714794 CCGCTTTGACGATGAAGACT 58.285 50.000 0.00 0.00 34.06 3.24
256 257 2.069273 CCGCTTTGACGATGAAGACTT 58.931 47.619 0.00 0.00 34.06 3.01
257 258 2.092838 CCGCTTTGACGATGAAGACTTC 59.907 50.000 8.34 8.34 34.06 3.01
258 259 2.092838 CGCTTTGACGATGAAGACTTCC 59.907 50.000 12.66 0.00 34.06 3.46
259 260 3.330267 GCTTTGACGATGAAGACTTCCT 58.670 45.455 12.66 2.51 0.00 3.36
260 261 3.369451 GCTTTGACGATGAAGACTTCCTC 59.631 47.826 12.66 11.05 0.00 3.71
261 262 4.815269 CTTTGACGATGAAGACTTCCTCT 58.185 43.478 12.66 3.12 0.00 3.69
262 263 4.873746 TTGACGATGAAGACTTCCTCTT 57.126 40.909 12.66 6.01 42.40 2.85
269 270 3.125698 GAAGACTTCCTCTTCGACGAG 57.874 52.381 11.80 11.80 44.40 4.18
270 271 2.476126 AGACTTCCTCTTCGACGAGA 57.524 50.000 19.69 3.49 32.74 4.04
271 272 2.780714 AGACTTCCTCTTCGACGAGAA 58.219 47.619 19.69 10.92 37.31 2.87
272 273 3.349022 AGACTTCCTCTTCGACGAGAAT 58.651 45.455 19.69 2.65 38.34 2.40
273 274 3.127895 AGACTTCCTCTTCGACGAGAATG 59.872 47.826 19.69 5.05 38.34 2.67
274 275 3.082548 ACTTCCTCTTCGACGAGAATGA 58.917 45.455 19.69 6.40 38.34 2.57
275 276 3.119779 ACTTCCTCTTCGACGAGAATGAC 60.120 47.826 19.69 0.00 38.34 3.06
276 277 2.712709 TCCTCTTCGACGAGAATGACT 58.287 47.619 19.69 0.00 38.34 3.41
277 278 2.420372 TCCTCTTCGACGAGAATGACTG 59.580 50.000 19.69 2.04 38.34 3.51
278 279 2.420372 CCTCTTCGACGAGAATGACTGA 59.580 50.000 19.69 0.00 38.34 3.41
279 280 3.119814 CCTCTTCGACGAGAATGACTGAA 60.120 47.826 19.69 0.00 38.34 3.02
280 281 4.476862 CTCTTCGACGAGAATGACTGAAA 58.523 43.478 13.38 0.00 38.34 2.69
281 282 4.227538 TCTTCGACGAGAATGACTGAAAC 58.772 43.478 0.00 0.00 38.34 2.78
282 283 3.917329 TCGACGAGAATGACTGAAACT 57.083 42.857 0.00 0.00 0.00 2.66
283 284 4.238761 TCGACGAGAATGACTGAAACTT 57.761 40.909 0.00 0.00 0.00 2.66
284 285 4.227538 TCGACGAGAATGACTGAAACTTC 58.772 43.478 0.00 0.00 0.00 3.01
285 286 3.981416 CGACGAGAATGACTGAAACTTCA 59.019 43.478 0.00 0.00 35.57 3.02
286 287 7.490549 TTCGACGAGAATGACTGAAACTTCAG 61.491 42.308 16.21 16.21 45.59 3.02
297 298 3.884895 TGAAACTTCAGGCACAAGAAGA 58.115 40.909 8.95 0.00 42.59 2.87
298 299 4.269183 TGAAACTTCAGGCACAAGAAGAA 58.731 39.130 8.95 0.00 42.59 2.52
299 300 4.704540 TGAAACTTCAGGCACAAGAAGAAA 59.295 37.500 8.95 0.00 42.59 2.52
300 301 5.360714 TGAAACTTCAGGCACAAGAAGAAAT 59.639 36.000 8.95 0.00 42.59 2.17
301 302 5.859205 AACTTCAGGCACAAGAAGAAATT 57.141 34.783 8.95 0.00 42.59 1.82
302 303 5.192327 ACTTCAGGCACAAGAAGAAATTG 57.808 39.130 8.95 0.00 42.59 2.32
303 304 4.889409 ACTTCAGGCACAAGAAGAAATTGA 59.111 37.500 8.95 0.00 42.59 2.57
304 305 5.009410 ACTTCAGGCACAAGAAGAAATTGAG 59.991 40.000 8.95 0.00 42.59 3.02
305 306 3.822735 TCAGGCACAAGAAGAAATTGAGG 59.177 43.478 0.00 0.00 0.00 3.86
306 307 2.560105 AGGCACAAGAAGAAATTGAGGC 59.440 45.455 2.33 2.33 41.77 4.70
307 308 2.353109 GGCACAAGAAGAAATTGAGGCC 60.353 50.000 0.00 0.00 41.05 5.19
308 309 2.353109 GCACAAGAAGAAATTGAGGCCC 60.353 50.000 0.00 0.00 0.00 5.80
309 310 3.160269 CACAAGAAGAAATTGAGGCCCT 58.840 45.455 0.00 0.00 0.00 5.19
310 311 3.575687 CACAAGAAGAAATTGAGGCCCTT 59.424 43.478 0.00 0.00 0.00 3.95
311 312 4.039609 CACAAGAAGAAATTGAGGCCCTTT 59.960 41.667 0.00 0.00 0.00 3.11
312 313 4.655649 ACAAGAAGAAATTGAGGCCCTTTT 59.344 37.500 0.00 0.00 0.00 2.27
313 314 4.879197 AGAAGAAATTGAGGCCCTTTTG 57.121 40.909 0.00 0.00 0.00 2.44
314 315 3.580022 AGAAGAAATTGAGGCCCTTTTGG 59.420 43.478 0.00 0.00 39.97 3.28
315 316 2.976440 AGAAATTGAGGCCCTTTTGGT 58.024 42.857 0.00 0.00 38.10 3.67
316 317 3.317406 AGAAATTGAGGCCCTTTTGGTT 58.683 40.909 0.00 0.00 38.10 3.67
317 318 3.716353 AGAAATTGAGGCCCTTTTGGTTT 59.284 39.130 0.00 0.00 38.10 3.27
318 319 4.904853 AGAAATTGAGGCCCTTTTGGTTTA 59.095 37.500 0.00 0.00 38.10 2.01
319 320 4.890158 AATTGAGGCCCTTTTGGTTTAG 57.110 40.909 0.00 0.00 38.10 1.85
320 321 1.627864 TGAGGCCCTTTTGGTTTAGC 58.372 50.000 0.00 0.00 38.10 3.09
321 322 1.133325 TGAGGCCCTTTTGGTTTAGCA 60.133 47.619 0.00 0.00 38.10 3.49
322 323 1.546029 GAGGCCCTTTTGGTTTAGCAG 59.454 52.381 0.00 0.00 38.10 4.24
323 324 0.037326 GGCCCTTTTGGTTTAGCAGC 60.037 55.000 0.00 0.00 38.10 5.25
324 325 0.678950 GCCCTTTTGGTTTAGCAGCA 59.321 50.000 0.00 0.00 38.10 4.41
325 326 1.069978 GCCCTTTTGGTTTAGCAGCAA 59.930 47.619 0.00 0.00 41.25 3.91
326 327 2.867647 GCCCTTTTGGTTTAGCAGCAAG 60.868 50.000 0.00 0.00 43.73 4.01
327 328 2.407090 CCTTTTGGTTTAGCAGCAAGC 58.593 47.619 0.00 0.00 43.73 4.01
328 329 2.036346 CCTTTTGGTTTAGCAGCAAGCT 59.964 45.455 8.76 8.76 43.73 3.74
329 330 3.493176 CCTTTTGGTTTAGCAGCAAGCTT 60.493 43.478 9.03 0.00 43.73 3.74
330 331 4.979268 CCTTTTGGTTTAGCAGCAAGCTTT 60.979 41.667 9.03 0.00 43.73 3.51
331 332 6.978457 CCTTTTGGTTTAGCAGCAAGCTTTG 61.978 44.000 9.03 0.00 43.73 2.77
345 346 1.264288 AGCTTTGCTTAAGTGTCGTGC 59.736 47.619 4.02 2.33 33.89 5.34
346 347 1.264288 GCTTTGCTTAAGTGTCGTGCT 59.736 47.619 4.02 0.00 36.19 4.40
347 348 2.287009 GCTTTGCTTAAGTGTCGTGCTT 60.287 45.455 4.02 0.00 36.19 3.91
348 349 3.059188 GCTTTGCTTAAGTGTCGTGCTTA 60.059 43.478 4.02 0.00 36.19 3.09
349 350 4.702392 CTTTGCTTAAGTGTCGTGCTTAG 58.298 43.478 4.02 0.00 31.13 2.18
350 351 2.066262 TGCTTAAGTGTCGTGCTTAGC 58.934 47.619 4.02 0.00 31.13 3.09
351 352 2.288825 TGCTTAAGTGTCGTGCTTAGCT 60.289 45.455 5.60 0.00 31.13 3.32
352 353 2.737252 GCTTAAGTGTCGTGCTTAGCTT 59.263 45.455 5.60 0.00 31.13 3.74
353 354 3.186613 GCTTAAGTGTCGTGCTTAGCTTT 59.813 43.478 5.60 0.00 31.13 3.51
354 355 4.702392 CTTAAGTGTCGTGCTTAGCTTTG 58.298 43.478 5.60 0.00 31.13 2.77
355 356 1.512926 AGTGTCGTGCTTAGCTTTGG 58.487 50.000 5.60 0.00 0.00 3.28
356 357 1.202651 AGTGTCGTGCTTAGCTTTGGT 60.203 47.619 5.60 0.00 0.00 3.67
357 358 1.069906 GTGTCGTGCTTAGCTTTGGTG 60.070 52.381 5.60 0.00 0.00 4.17
358 359 0.110192 GTCGTGCTTAGCTTTGGTGC 60.110 55.000 5.60 0.00 0.00 5.01
359 360 1.210155 CGTGCTTAGCTTTGGTGCC 59.790 57.895 5.60 0.00 0.00 5.01
360 361 1.237285 CGTGCTTAGCTTTGGTGCCT 61.237 55.000 5.60 0.00 0.00 4.75
361 362 0.523519 GTGCTTAGCTTTGGTGCCTC 59.476 55.000 5.60 0.00 0.00 4.70
362 363 0.401738 TGCTTAGCTTTGGTGCCTCT 59.598 50.000 5.60 0.00 0.00 3.69
363 364 1.628340 TGCTTAGCTTTGGTGCCTCTA 59.372 47.619 5.60 0.00 0.00 2.43
364 365 2.239654 TGCTTAGCTTTGGTGCCTCTAT 59.760 45.455 5.60 0.00 0.00 1.98
365 366 3.282885 GCTTAGCTTTGGTGCCTCTATT 58.717 45.455 0.00 0.00 0.00 1.73
366 367 4.080582 TGCTTAGCTTTGGTGCCTCTATTA 60.081 41.667 5.60 0.00 0.00 0.98
367 368 4.881850 GCTTAGCTTTGGTGCCTCTATTAA 59.118 41.667 0.00 0.00 0.00 1.40
368 369 5.357032 GCTTAGCTTTGGTGCCTCTATTAAA 59.643 40.000 0.00 0.00 0.00 1.52
369 370 6.458888 GCTTAGCTTTGGTGCCTCTATTAAAG 60.459 42.308 0.00 0.00 0.00 1.85
370 371 4.923415 AGCTTTGGTGCCTCTATTAAAGT 58.077 39.130 0.00 0.00 0.00 2.66
371 372 4.702131 AGCTTTGGTGCCTCTATTAAAGTG 59.298 41.667 0.00 0.00 0.00 3.16
372 373 4.459337 GCTTTGGTGCCTCTATTAAAGTGT 59.541 41.667 0.00 0.00 0.00 3.55
373 374 5.048013 GCTTTGGTGCCTCTATTAAAGTGTT 60.048 40.000 0.00 0.00 0.00 3.32
374 375 6.150474 GCTTTGGTGCCTCTATTAAAGTGTTA 59.850 38.462 0.00 0.00 0.00 2.41
375 376 7.148069 GCTTTGGTGCCTCTATTAAAGTGTTAT 60.148 37.037 0.00 0.00 0.00 1.89
376 377 8.644374 TTTGGTGCCTCTATTAAAGTGTTATT 57.356 30.769 0.00 0.00 0.00 1.40
377 378 9.742144 TTTGGTGCCTCTATTAAAGTGTTATTA 57.258 29.630 0.00 0.00 0.00 0.98
378 379 9.742144 TTGGTGCCTCTATTAAAGTGTTATTAA 57.258 29.630 0.00 0.00 0.00 1.40
379 380 9.914834 TGGTGCCTCTATTAAAGTGTTATTAAT 57.085 29.630 0.00 0.00 36.96 1.40
403 404 3.903876 CAGTATGCGCATGTCCAAC 57.096 52.632 32.48 21.39 0.00 3.77
404 405 1.372582 CAGTATGCGCATGTCCAACT 58.627 50.000 32.48 23.29 0.00 3.16
405 406 1.739466 CAGTATGCGCATGTCCAACTT 59.261 47.619 32.48 6.35 0.00 2.66
406 407 2.162208 CAGTATGCGCATGTCCAACTTT 59.838 45.455 32.48 5.52 0.00 2.66
407 408 3.373748 CAGTATGCGCATGTCCAACTTTA 59.626 43.478 32.48 5.53 0.00 1.85
408 409 3.623060 AGTATGCGCATGTCCAACTTTAG 59.377 43.478 32.48 0.00 0.00 1.85
409 410 1.890876 TGCGCATGTCCAACTTTAGT 58.109 45.000 5.66 0.00 0.00 2.24
410 411 1.535028 TGCGCATGTCCAACTTTAGTG 59.465 47.619 5.66 0.00 0.00 2.74
411 412 1.535462 GCGCATGTCCAACTTTAGTGT 59.465 47.619 0.30 0.00 0.00 3.55
412 413 2.739913 GCGCATGTCCAACTTTAGTGTA 59.260 45.455 0.30 0.00 0.00 2.90
413 414 3.187637 GCGCATGTCCAACTTTAGTGTAA 59.812 43.478 0.30 0.00 0.00 2.41
414 415 4.319911 GCGCATGTCCAACTTTAGTGTAAA 60.320 41.667 0.30 0.00 0.00 2.01
415 416 5.619086 GCGCATGTCCAACTTTAGTGTAAAT 60.619 40.000 0.30 0.00 0.00 1.40
416 417 6.378582 CGCATGTCCAACTTTAGTGTAAATT 58.621 36.000 0.00 0.00 0.00 1.82
417 418 7.523219 CGCATGTCCAACTTTAGTGTAAATTA 58.477 34.615 0.00 0.00 0.00 1.40
418 419 8.181573 CGCATGTCCAACTTTAGTGTAAATTAT 58.818 33.333 0.00 0.00 0.00 1.28
419 420 9.855021 GCATGTCCAACTTTAGTGTAAATTATT 57.145 29.630 0.00 0.00 0.00 1.40
452 453 8.774586 CAGTACTATGAACCAGTATTATTTGGC 58.225 37.037 0.00 0.00 38.03 4.52
453 454 8.491134 AGTACTATGAACCAGTATTATTTGGCA 58.509 33.333 0.00 0.00 38.03 4.92
460 461 6.515272 ACCAGTATTATTTGGCAAGACAAG 57.485 37.500 0.00 0.00 38.03 3.16
497 498 2.712057 AGCTTTTGAAGATTGCGTGG 57.288 45.000 0.00 0.00 0.00 4.94
502 503 2.270352 TTGAAGATTGCGTGGGAGTT 57.730 45.000 0.00 0.00 0.00 3.01
504 505 2.151202 TGAAGATTGCGTGGGAGTTTC 58.849 47.619 0.00 0.00 0.00 2.78
505 506 2.151202 GAAGATTGCGTGGGAGTTTCA 58.849 47.619 0.00 0.00 0.00 2.69
506 507 2.496899 AGATTGCGTGGGAGTTTCAT 57.503 45.000 0.00 0.00 0.00 2.57
507 508 2.086869 AGATTGCGTGGGAGTTTCATG 58.913 47.619 0.00 0.00 0.00 3.07
508 509 2.083774 GATTGCGTGGGAGTTTCATGA 58.916 47.619 0.00 0.00 0.00 3.07
509 510 2.198827 TTGCGTGGGAGTTTCATGAT 57.801 45.000 0.00 0.00 0.00 2.45
510 511 2.198827 TGCGTGGGAGTTTCATGATT 57.801 45.000 0.00 0.00 0.00 2.57
511 512 3.342377 TGCGTGGGAGTTTCATGATTA 57.658 42.857 0.00 0.00 0.00 1.75
512 513 3.270027 TGCGTGGGAGTTTCATGATTAG 58.730 45.455 0.00 0.00 0.00 1.73
513 514 2.032178 GCGTGGGAGTTTCATGATTAGC 59.968 50.000 0.00 0.00 0.00 3.09
514 515 3.535561 CGTGGGAGTTTCATGATTAGCT 58.464 45.455 0.00 0.00 0.00 3.32
515 516 4.693283 CGTGGGAGTTTCATGATTAGCTA 58.307 43.478 0.00 0.00 0.00 3.32
516 517 5.116180 CGTGGGAGTTTCATGATTAGCTAA 58.884 41.667 8.99 8.99 0.00 3.09
517 518 5.235186 CGTGGGAGTTTCATGATTAGCTAAG 59.765 44.000 12.54 0.00 0.00 2.18
518 519 6.349300 GTGGGAGTTTCATGATTAGCTAAGA 58.651 40.000 12.54 0.63 0.00 2.10
519 520 6.258947 GTGGGAGTTTCATGATTAGCTAAGAC 59.741 42.308 12.54 9.08 0.00 3.01
520 521 6.156949 TGGGAGTTTCATGATTAGCTAAGACT 59.843 38.462 12.54 6.77 0.00 3.24
521 522 7.051000 GGGAGTTTCATGATTAGCTAAGACTT 58.949 38.462 12.54 4.52 0.00 3.01
523 524 7.984617 GGAGTTTCATGATTAGCTAAGACTTCT 59.015 37.037 12.54 3.20 0.00 2.85
530 531 6.987386 TGATTAGCTAAGACTTCTAGATGGC 58.013 40.000 12.54 6.96 0.00 4.40
535 536 3.540314 AAGACTTCTAGATGGCTGCTG 57.460 47.619 14.44 0.00 0.00 4.41
537 538 2.836981 AGACTTCTAGATGGCTGCTGTT 59.163 45.455 13.06 0.00 0.00 3.16
549 550 3.243704 TGGCTGCTGTTTTTGGATGTAAC 60.244 43.478 0.00 0.00 0.00 2.50
557 558 4.202161 TGTTTTTGGATGTAACATTGCCGT 60.202 37.500 0.00 0.00 0.00 5.68
560 561 0.027586 GGATGTAACATTGCCGTCGC 59.972 55.000 0.00 0.00 0.00 5.19
571 1202 2.851104 CCGTCGCGTTTGAACCTC 59.149 61.111 5.77 0.00 0.00 3.85
577 1208 1.498865 CGCGTTTGAACCTCTGCAGT 61.499 55.000 14.67 0.00 0.00 4.40
582 1213 3.695816 GTTTGAACCTCTGCAGTGTTTC 58.304 45.455 20.08 18.37 0.00 2.78
583 1214 2.708216 TGAACCTCTGCAGTGTTTCA 57.292 45.000 20.58 20.58 0.00 2.69
585 1216 1.265365 GAACCTCTGCAGTGTTTCAGC 59.735 52.381 17.89 6.80 0.00 4.26
586 1217 0.471617 ACCTCTGCAGTGTTTCAGCT 59.528 50.000 14.67 0.00 0.00 4.24
587 1218 0.873054 CCTCTGCAGTGTTTCAGCTG 59.127 55.000 14.67 7.63 35.93 4.24
592 1223 1.571460 CAGTGTTTCAGCTGACGGC 59.429 57.895 18.03 10.05 42.19 5.68
609 1240 1.588082 GCCGTGGTCCGAACTCTTA 59.412 57.895 0.00 0.00 39.56 2.10
611 1242 1.992170 CCGTGGTCCGAACTCTTAAG 58.008 55.000 0.00 0.00 39.56 1.85
612 1243 1.271656 CCGTGGTCCGAACTCTTAAGT 59.728 52.381 1.63 0.00 39.56 2.24
622 1257 6.479331 GTCCGAACTCTTAAGTTTCTGTCTTT 59.521 38.462 1.63 0.00 45.80 2.52
637 1272 5.717119 TCTGTCTTTAGTTGTATCCCGTTC 58.283 41.667 0.00 0.00 0.00 3.95
697 1960 1.270068 GCTTCTAGCGTCTTCGTTCC 58.730 55.000 0.00 0.00 39.49 3.62
721 1984 2.507339 AAAAACAAGACGCCCATGTG 57.493 45.000 0.00 0.00 0.00 3.21
771 2034 1.002502 GTCCTTAGTTTGCCGGGCT 60.003 57.895 21.46 1.61 0.00 5.19
780 2043 3.551496 TTGCCGGGCTCACAGGAAG 62.551 63.158 21.46 0.00 36.40 3.46
824 2107 0.107017 AGCATCCAATTCTGGGGACG 60.107 55.000 0.00 0.00 43.71 4.79
825 2108 0.394352 GCATCCAATTCTGGGGACGT 60.394 55.000 0.00 0.00 43.71 4.34
826 2109 1.134220 GCATCCAATTCTGGGGACGTA 60.134 52.381 0.00 0.00 43.71 3.57
827 2110 2.561569 CATCCAATTCTGGGGACGTAC 58.438 52.381 0.00 0.00 43.71 3.67
967 2263 2.732094 CGCAGCAAGCAAGGCAAC 60.732 61.111 0.00 0.00 46.13 4.17
968 2264 2.356673 GCAGCAAGCAAGGCAACC 60.357 61.111 0.00 0.00 44.79 3.77
970 2266 1.442567 CAGCAAGCAAGGCAACCAA 59.557 52.632 0.00 0.00 37.17 3.67
972 2268 0.105408 AGCAAGCAAGGCAACCAAAG 59.895 50.000 0.00 0.00 37.17 2.77
976 2272 0.540923 AGCAAGGCAACCAAAGCAAA 59.459 45.000 0.00 0.00 37.17 3.68
978 2274 0.939419 CAAGGCAACCAAAGCAAAGC 59.061 50.000 0.00 0.00 37.17 3.51
979 2275 0.540923 AAGGCAACCAAAGCAAAGCA 59.459 45.000 0.00 0.00 37.17 3.91
990 2286 4.400251 CCAAAGCAAAGCAAGGAGATCATA 59.600 41.667 0.00 0.00 0.00 2.15
991 2287 5.068723 CCAAAGCAAAGCAAGGAGATCATAT 59.931 40.000 0.00 0.00 0.00 1.78
992 2288 6.207213 CAAAGCAAAGCAAGGAGATCATATC 58.793 40.000 0.00 0.00 0.00 1.63
993 2289 5.045012 AGCAAAGCAAGGAGATCATATCA 57.955 39.130 0.00 0.00 0.00 2.15
1041 2337 2.430610 CCTCGGCCTCCTTCTCCTG 61.431 68.421 0.00 0.00 0.00 3.86
1138 2437 1.843992 CAACAAGCACAAGGACAAGC 58.156 50.000 0.00 0.00 0.00 4.01
1139 2438 1.134753 CAACAAGCACAAGGACAAGCA 59.865 47.619 0.00 0.00 0.00 3.91
1140 2439 1.027357 ACAAGCACAAGGACAAGCAG 58.973 50.000 0.00 0.00 0.00 4.24
1158 2463 0.528470 AGTCTTCTTCCTCGCCTTCG 59.472 55.000 0.00 0.00 0.00 3.79
1266 2586 1.153349 GGATTTCTTCGCGGAGGCT 60.153 57.895 15.94 0.00 36.88 4.58
1344 2664 2.125512 GAGTTCCTGGACGCGCAT 60.126 61.111 5.73 0.00 0.00 4.73
1485 2805 2.101770 CCCTACGGCGAGAACGTC 59.898 66.667 16.62 0.00 44.37 4.34
1608 2928 2.029844 GGTCTGCGAGCACTTCACC 61.030 63.158 0.00 0.00 0.00 4.02
1740 3060 2.084546 GTGCCGCTCACCTAATTCTTT 58.915 47.619 0.00 0.00 39.79 2.52
1741 3061 2.096013 GTGCCGCTCACCTAATTCTTTC 59.904 50.000 0.00 0.00 39.79 2.62
1743 3063 3.010420 GCCGCTCACCTAATTCTTTCTT 58.990 45.455 0.00 0.00 0.00 2.52
1744 3064 3.440522 GCCGCTCACCTAATTCTTTCTTT 59.559 43.478 0.00 0.00 0.00 2.52
1747 3067 5.858581 CCGCTCACCTAATTCTTTCTTTTTG 59.141 40.000 0.00 0.00 0.00 2.44
1748 3068 6.438763 CGCTCACCTAATTCTTTCTTTTTGT 58.561 36.000 0.00 0.00 0.00 2.83
1751 3071 9.744468 GCTCACCTAATTCTTTCTTTTTGTTAA 57.256 29.630 0.00 0.00 0.00 2.01
1829 3150 0.904865 CTGGGCTGGACTACACCTCA 60.905 60.000 0.00 0.00 0.00 3.86
1831 3152 0.250513 GGGCTGGACTACACCTCAAG 59.749 60.000 0.00 0.00 0.00 3.02
1864 3188 5.974108 TCTTTTATTAGCGGACTAGCTTGT 58.026 37.500 0.00 0.00 46.80 3.16
1865 3189 6.040878 TCTTTTATTAGCGGACTAGCTTGTC 58.959 40.000 18.55 18.55 46.80 3.18
1866 3190 5.593679 TTTATTAGCGGACTAGCTTGTCT 57.406 39.130 24.24 10.32 46.80 3.41
1956 5827 7.566760 TTGAGCAACAAGACAAAAAGATAGA 57.433 32.000 0.00 0.00 34.20 1.98
1957 5828 6.959361 TGAGCAACAAGACAAAAAGATAGAC 58.041 36.000 0.00 0.00 0.00 2.59
1976 5847 1.541147 ACATTTCATGGTTCCAGCACG 59.459 47.619 0.00 0.00 33.60 5.34
1977 5848 0.527565 ATTTCATGGTTCCAGCACGC 59.472 50.000 0.00 0.00 0.00 5.34
1978 5849 0.821301 TTTCATGGTTCCAGCACGCA 60.821 50.000 0.00 0.00 0.00 5.24
1980 5851 2.672996 ATGGTTCCAGCACGCACC 60.673 61.111 0.00 0.00 0.00 5.01
1982 5853 2.904866 GGTTCCAGCACGCACCAA 60.905 61.111 0.00 0.00 0.00 3.67
1986 5857 1.472480 GTTCCAGCACGCACCAATAAT 59.528 47.619 0.00 0.00 0.00 1.28
1987 5858 1.832883 TCCAGCACGCACCAATAATT 58.167 45.000 0.00 0.00 0.00 1.40
1988 5859 1.742831 TCCAGCACGCACCAATAATTC 59.257 47.619 0.00 0.00 0.00 2.17
1991 5862 1.133025 AGCACGCACCAATAATTCAGC 59.867 47.619 0.00 0.00 0.00 4.26
1993 5864 2.670789 GCACGCACCAATAATTCAGCAA 60.671 45.455 0.00 0.00 0.00 3.91
1996 5867 3.173599 CGCACCAATAATTCAGCAACAG 58.826 45.455 0.00 0.00 0.00 3.16
1998 5869 4.418392 GCACCAATAATTCAGCAACAGAG 58.582 43.478 0.00 0.00 0.00 3.35
2001 5872 6.088824 CACCAATAATTCAGCAACAGAGTTC 58.911 40.000 0.00 0.00 0.00 3.01
2005 5876 7.487189 CCAATAATTCAGCAACAGAGTTCATTC 59.513 37.037 0.00 0.00 0.00 2.67
2007 5878 5.624344 ATTCAGCAACAGAGTTCATTCAG 57.376 39.130 0.00 0.00 0.00 3.02
2008 5879 2.810274 TCAGCAACAGAGTTCATTCAGC 59.190 45.455 0.00 0.00 0.00 4.26
2009 5880 2.551032 CAGCAACAGAGTTCATTCAGCA 59.449 45.455 0.00 0.00 0.00 4.41
2012 5883 3.608707 GCAACAGAGTTCATTCAGCACAG 60.609 47.826 0.00 0.00 0.00 3.66
2013 5884 3.758755 ACAGAGTTCATTCAGCACAGA 57.241 42.857 0.00 0.00 0.00 3.41
2014 5885 3.661944 ACAGAGTTCATTCAGCACAGAG 58.338 45.455 0.00 0.00 0.00 3.35
2020 5891 3.257469 TCATTCAGCACAGAGATCACC 57.743 47.619 0.00 0.00 0.00 4.02
2025 5896 4.824479 TCAGCACAGAGATCACCAATAA 57.176 40.909 0.00 0.00 0.00 1.40
2028 5899 5.819379 TCAGCACAGAGATCACCAATAATTC 59.181 40.000 0.00 0.00 0.00 2.17
2031 5902 5.505324 GCACAGAGATCACCAATAATTCAGC 60.505 44.000 0.00 0.00 0.00 4.26
2032 5903 5.587443 CACAGAGATCACCAATAATTCAGCA 59.413 40.000 0.00 0.00 0.00 4.41
2033 5904 6.094464 CACAGAGATCACCAATAATTCAGCAA 59.906 38.462 0.00 0.00 0.00 3.91
2034 5905 6.094603 ACAGAGATCACCAATAATTCAGCAAC 59.905 38.462 0.00 0.00 0.00 4.17
2035 5906 6.094464 CAGAGATCACCAATAATTCAGCAACA 59.906 38.462 0.00 0.00 0.00 3.33
2036 5907 6.318144 AGAGATCACCAATAATTCAGCAACAG 59.682 38.462 0.00 0.00 0.00 3.16
2037 5908 6.182627 AGATCACCAATAATTCAGCAACAGA 58.817 36.000 0.00 0.00 0.00 3.41
2038 5909 5.885230 TCACCAATAATTCAGCAACAGAG 57.115 39.130 0.00 0.00 0.00 3.35
2041 5912 6.072508 TCACCAATAATTCAGCAACAGAGTTC 60.073 38.462 0.00 0.00 0.00 3.01
2043 5914 6.435277 ACCAATAATTCAGCAACAGAGTTCAT 59.565 34.615 0.00 0.00 0.00 2.57
2045 5916 7.487189 CCAATAATTCAGCAACAGAGTTCATTC 59.513 37.037 0.00 0.00 0.00 2.67
2046 5917 7.692460 ATAATTCAGCAACAGAGTTCATTCA 57.308 32.000 0.00 0.00 0.00 2.57
2047 5918 5.624344 ATTCAGCAACAGAGTTCATTCAG 57.376 39.130 0.00 0.00 0.00 3.02
2050 5921 2.551459 AGCAACAGAGTTCATTCAGCAC 59.449 45.455 0.00 0.00 0.00 4.40
2052 5923 3.608707 GCAACAGAGTTCATTCAGCACAG 60.609 47.826 0.00 0.00 0.00 3.66
2053 5924 3.758755 ACAGAGTTCATTCAGCACAGA 57.241 42.857 0.00 0.00 0.00 3.41
2054 5925 3.661944 ACAGAGTTCATTCAGCACAGAG 58.338 45.455 0.00 0.00 0.00 3.35
2055 5926 3.323115 ACAGAGTTCATTCAGCACAGAGA 59.677 43.478 0.00 0.00 0.00 3.10
2056 5927 4.020396 ACAGAGTTCATTCAGCACAGAGAT 60.020 41.667 0.00 0.00 0.00 2.75
2057 5928 4.567558 CAGAGTTCATTCAGCACAGAGATC 59.432 45.833 0.00 0.00 0.00 2.75
2058 5929 4.222366 AGAGTTCATTCAGCACAGAGATCA 59.778 41.667 0.00 0.00 0.00 2.92
2059 5930 4.252073 AGTTCATTCAGCACAGAGATCAC 58.748 43.478 0.00 0.00 0.00 3.06
2063 5934 3.708403 TTCAGCACAGAGATCACCAAT 57.292 42.857 0.00 0.00 0.00 3.16
2064 5935 4.824479 TTCAGCACAGAGATCACCAATA 57.176 40.909 0.00 0.00 0.00 1.90
2065 5936 4.824479 TCAGCACAGAGATCACCAATAA 57.176 40.909 0.00 0.00 0.00 1.40
2067 5938 5.748402 TCAGCACAGAGATCACCAATAATT 58.252 37.500 0.00 0.00 0.00 1.40
2069 5940 5.587443 CAGCACAGAGATCACCAATAATTCA 59.413 40.000 0.00 0.00 0.00 2.57
2070 5941 5.821470 AGCACAGAGATCACCAATAATTCAG 59.179 40.000 0.00 0.00 0.00 3.02
2071 5942 5.505324 GCACAGAGATCACCAATAATTCAGC 60.505 44.000 0.00 0.00 0.00 4.26
2072 5943 5.587443 CACAGAGATCACCAATAATTCAGCA 59.413 40.000 0.00 0.00 0.00 4.41
2073 5944 6.094464 CACAGAGATCACCAATAATTCAGCAA 59.906 38.462 0.00 0.00 0.00 3.91
2074 5945 6.094603 ACAGAGATCACCAATAATTCAGCAAC 59.905 38.462 0.00 0.00 0.00 4.17
2075 5946 6.094464 CAGAGATCACCAATAATTCAGCAACA 59.906 38.462 0.00 0.00 0.00 3.33
2076 5947 6.318144 AGAGATCACCAATAATTCAGCAACAG 59.682 38.462 0.00 0.00 0.00 3.16
2079 5950 5.316167 TCACCAATAATTCAGCAACAGAGT 58.684 37.500 0.00 0.00 0.00 3.24
2080 5951 5.769662 TCACCAATAATTCAGCAACAGAGTT 59.230 36.000 0.00 0.00 0.00 3.01
2081 5952 6.072508 TCACCAATAATTCAGCAACAGAGTTC 60.073 38.462 0.00 0.00 0.00 3.01
2083 5954 6.435277 ACCAATAATTCAGCAACAGAGTTCAT 59.565 34.615 0.00 0.00 0.00 2.57
2084 5955 7.039504 ACCAATAATTCAGCAACAGAGTTCATT 60.040 33.333 0.00 0.00 0.00 2.57
2085 5956 7.487189 CCAATAATTCAGCAACAGAGTTCATTC 59.513 37.037 0.00 0.00 0.00 2.67
2086 5957 7.692460 ATAATTCAGCAACAGAGTTCATTCA 57.308 32.000 0.00 0.00 0.00 2.57
2087 5958 5.624344 ATTCAGCAACAGAGTTCATTCAG 57.376 39.130 0.00 0.00 0.00 3.02
2088 5959 2.810274 TCAGCAACAGAGTTCATTCAGC 59.190 45.455 0.00 0.00 0.00 4.26
2089 5960 2.551032 CAGCAACAGAGTTCATTCAGCA 59.449 45.455 0.00 0.00 0.00 4.41
2090 5961 2.551459 AGCAACAGAGTTCATTCAGCAC 59.449 45.455 0.00 0.00 0.00 4.40
2091 5962 2.291465 GCAACAGAGTTCATTCAGCACA 59.709 45.455 0.00 0.00 0.00 4.57
2092 5963 3.608707 GCAACAGAGTTCATTCAGCACAG 60.609 47.826 0.00 0.00 0.00 3.66
2094 5965 3.661944 ACAGAGTTCATTCAGCACAGAG 58.338 45.455 0.00 0.00 0.00 3.35
2096 5967 4.020396 ACAGAGTTCATTCAGCACAGAGAT 60.020 41.667 0.00 0.00 0.00 2.75
2098 5969 4.222366 AGAGTTCATTCAGCACAGAGATCA 59.778 41.667 0.00 0.00 0.00 2.92
2099 5970 4.252073 AGTTCATTCAGCACAGAGATCAC 58.748 43.478 0.00 0.00 0.00 3.06
2100 5971 3.257469 TCATTCAGCACAGAGATCACC 57.743 47.619 0.00 0.00 0.00 4.02
2101 5972 2.568509 TCATTCAGCACAGAGATCACCA 59.431 45.455 0.00 0.00 0.00 4.17
2102 5973 3.008266 TCATTCAGCACAGAGATCACCAA 59.992 43.478 0.00 0.00 0.00 3.67
2103 5974 3.708403 TTCAGCACAGAGATCACCAAT 57.292 42.857 0.00 0.00 0.00 3.16
2104 5975 4.824479 TTCAGCACAGAGATCACCAATA 57.176 40.909 0.00 0.00 0.00 1.90
2105 5976 4.824479 TCAGCACAGAGATCACCAATAA 57.176 40.909 0.00 0.00 0.00 1.40
2107 5978 5.748402 TCAGCACAGAGATCACCAATAATT 58.252 37.500 0.00 0.00 0.00 1.40
2110 5981 5.821470 AGCACAGAGATCACCAATAATTCAG 59.179 40.000 0.00 0.00 0.00 3.02
2118 5989 5.885230 TCACCAATAATTCAGCAACAGAG 57.115 39.130 0.00 0.00 0.00 3.35
2172 6043 3.010420 GCCAATTCAACTCAGGGTAGAC 58.990 50.000 0.00 0.00 0.00 2.59
2390 6581 1.271926 TGGATCCGACTCACTCACTCA 60.272 52.381 7.39 0.00 0.00 3.41
2611 6804 2.026641 CCATACTTGGCCCTGTTCATG 58.973 52.381 0.00 0.81 35.85 3.07
2625 6818 5.220989 CCCTGTTCATGTTCATCACATCATC 60.221 44.000 0.00 0.00 43.17 2.92
2626 6819 5.355910 CCTGTTCATGTTCATCACATCATCA 59.644 40.000 0.00 0.00 43.17 3.07
2627 6820 6.039382 CCTGTTCATGTTCATCACATCATCAT 59.961 38.462 0.00 0.00 43.17 2.45
2628 6821 7.399245 TGTTCATGTTCATCACATCATCATT 57.601 32.000 0.00 0.00 43.17 2.57
2631 6824 7.399245 TCATGTTCATCACATCATCATTGTT 57.601 32.000 0.00 0.00 43.17 2.83
2635 6828 9.744468 ATGTTCATCACATCATCATTGTTATTG 57.256 29.630 0.00 0.00 43.17 1.90
2648 6841 9.153721 CATCATTGTTATTGTTATTGCCTTGTT 57.846 29.630 0.00 0.00 0.00 2.83
2654 6847 9.988815 TGTTATTGTTATTGCCTTGTTATTGTT 57.011 25.926 0.00 0.00 0.00 2.83
2697 6890 5.467063 ACAACCAAACTCTCGAGAAAAGATC 59.533 40.000 17.36 0.00 0.00 2.75
2705 6898 6.626302 ACTCTCGAGAAAAGATCCAACTTAG 58.374 40.000 17.36 1.15 0.00 2.18
2720 6913 5.652891 TCCAACTTAGTAGCAACCAAAACAA 59.347 36.000 0.00 0.00 0.00 2.83
2721 6914 5.746721 CCAACTTAGTAGCAACCAAAACAAC 59.253 40.000 0.00 0.00 0.00 3.32
2722 6915 6.326375 CAACTTAGTAGCAACCAAAACAACA 58.674 36.000 0.00 0.00 0.00 3.33
2723 6916 6.518208 ACTTAGTAGCAACCAAAACAACAA 57.482 33.333 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.034313 TGAAGGTAGATAGTTGATAGCCATTT 57.966 34.615 0.00 0.00 0.00 2.32
1 2 7.256475 CCTGAAGGTAGATAGTTGATAGCCATT 60.256 40.741 0.00 0.00 0.00 3.16
2 3 6.212388 CCTGAAGGTAGATAGTTGATAGCCAT 59.788 42.308 0.00 0.00 0.00 4.40
3 4 5.540337 CCTGAAGGTAGATAGTTGATAGCCA 59.460 44.000 0.00 0.00 0.00 4.75
4 5 5.775701 TCCTGAAGGTAGATAGTTGATAGCC 59.224 44.000 0.00 0.00 36.34 3.93
5 6 6.071616 CCTCCTGAAGGTAGATAGTTGATAGC 60.072 46.154 0.00 0.00 40.67 2.97
6 7 7.461182 CCTCCTGAAGGTAGATAGTTGATAG 57.539 44.000 0.00 0.00 40.67 2.08
21 22 5.047021 TCACAACAGAAGATACCTCCTGAAG 60.047 44.000 0.00 0.00 0.00 3.02
22 23 4.838423 TCACAACAGAAGATACCTCCTGAA 59.162 41.667 0.00 0.00 0.00 3.02
23 24 4.416516 TCACAACAGAAGATACCTCCTGA 58.583 43.478 0.00 0.00 0.00 3.86
24 25 4.221703 ACTCACAACAGAAGATACCTCCTG 59.778 45.833 0.00 0.00 0.00 3.86
25 26 4.221703 CACTCACAACAGAAGATACCTCCT 59.778 45.833 0.00 0.00 0.00 3.69
26 27 4.220821 TCACTCACAACAGAAGATACCTCC 59.779 45.833 0.00 0.00 0.00 4.30
27 28 5.392767 TCACTCACAACAGAAGATACCTC 57.607 43.478 0.00 0.00 0.00 3.85
28 29 5.247110 ACATCACTCACAACAGAAGATACCT 59.753 40.000 0.00 0.00 0.00 3.08
29 30 5.482908 ACATCACTCACAACAGAAGATACC 58.517 41.667 0.00 0.00 0.00 2.73
30 31 7.063544 GGTTACATCACTCACAACAGAAGATAC 59.936 40.741 0.00 0.00 0.00 2.24
31 32 7.039011 AGGTTACATCACTCACAACAGAAGATA 60.039 37.037 0.00 0.00 0.00 1.98
32 33 5.934625 GGTTACATCACTCACAACAGAAGAT 59.065 40.000 0.00 0.00 0.00 2.40
33 34 5.070446 AGGTTACATCACTCACAACAGAAGA 59.930 40.000 0.00 0.00 0.00 2.87
34 35 5.178252 CAGGTTACATCACTCACAACAGAAG 59.822 44.000 0.00 0.00 0.00 2.85
35 36 5.056480 CAGGTTACATCACTCACAACAGAA 58.944 41.667 0.00 0.00 0.00 3.02
36 37 4.503123 CCAGGTTACATCACTCACAACAGA 60.503 45.833 0.00 0.00 0.00 3.41
37 38 3.748048 CCAGGTTACATCACTCACAACAG 59.252 47.826 0.00 0.00 0.00 3.16
38 39 3.495983 CCCAGGTTACATCACTCACAACA 60.496 47.826 0.00 0.00 0.00 3.33
39 40 3.074412 CCCAGGTTACATCACTCACAAC 58.926 50.000 0.00 0.00 0.00 3.32
40 41 2.976185 TCCCAGGTTACATCACTCACAA 59.024 45.455 0.00 0.00 0.00 3.33
41 42 2.615391 TCCCAGGTTACATCACTCACA 58.385 47.619 0.00 0.00 0.00 3.58
42 43 3.914426 ATCCCAGGTTACATCACTCAC 57.086 47.619 0.00 0.00 0.00 3.51
43 44 4.536090 AGAAATCCCAGGTTACATCACTCA 59.464 41.667 0.00 0.00 0.00 3.41
44 45 5.104259 AGAAATCCCAGGTTACATCACTC 57.896 43.478 0.00 0.00 0.00 3.51
45 46 6.409695 CCATAGAAATCCCAGGTTACATCACT 60.410 42.308 0.00 0.00 0.00 3.41
46 47 5.765182 CCATAGAAATCCCAGGTTACATCAC 59.235 44.000 0.00 0.00 0.00 3.06
47 48 5.431731 ACCATAGAAATCCCAGGTTACATCA 59.568 40.000 0.00 0.00 0.00 3.07
48 49 5.765182 CACCATAGAAATCCCAGGTTACATC 59.235 44.000 0.00 0.00 0.00 3.06
49 50 5.193728 ACACCATAGAAATCCCAGGTTACAT 59.806 40.000 0.00 0.00 0.00 2.29
50 51 4.538490 ACACCATAGAAATCCCAGGTTACA 59.462 41.667 0.00 0.00 0.00 2.41
51 52 5.112129 ACACCATAGAAATCCCAGGTTAC 57.888 43.478 0.00 0.00 0.00 2.50
52 53 4.785914 TGACACCATAGAAATCCCAGGTTA 59.214 41.667 0.00 0.00 0.00 2.85
53 54 3.591527 TGACACCATAGAAATCCCAGGTT 59.408 43.478 0.00 0.00 0.00 3.50
54 55 3.189606 TGACACCATAGAAATCCCAGGT 58.810 45.455 0.00 0.00 0.00 4.00
55 56 3.200825 ACTGACACCATAGAAATCCCAGG 59.799 47.826 0.00 0.00 0.00 4.45
56 57 4.080919 TGACTGACACCATAGAAATCCCAG 60.081 45.833 0.00 0.00 0.00 4.45
57 58 3.843619 TGACTGACACCATAGAAATCCCA 59.156 43.478 0.00 0.00 0.00 4.37
58 59 4.446371 CTGACTGACACCATAGAAATCCC 58.554 47.826 0.00 0.00 0.00 3.85
59 60 4.162320 TCCTGACTGACACCATAGAAATCC 59.838 45.833 0.00 0.00 0.00 3.01
60 61 5.344743 TCCTGACTGACACCATAGAAATC 57.655 43.478 0.00 0.00 0.00 2.17
61 62 5.738909 CTTCCTGACTGACACCATAGAAAT 58.261 41.667 0.00 0.00 0.00 2.17
62 63 4.563580 GCTTCCTGACTGACACCATAGAAA 60.564 45.833 0.00 0.00 0.00 2.52
63 64 3.055819 GCTTCCTGACTGACACCATAGAA 60.056 47.826 0.00 0.00 0.00 2.10
64 65 2.497675 GCTTCCTGACTGACACCATAGA 59.502 50.000 0.00 0.00 0.00 1.98
65 66 2.419297 GGCTTCCTGACTGACACCATAG 60.419 54.545 0.00 0.00 0.00 2.23
66 67 1.555075 GGCTTCCTGACTGACACCATA 59.445 52.381 0.00 0.00 0.00 2.74
67 68 0.326264 GGCTTCCTGACTGACACCAT 59.674 55.000 0.00 0.00 0.00 3.55
68 69 1.754745 GGCTTCCTGACTGACACCA 59.245 57.895 0.00 0.00 0.00 4.17
69 70 1.374758 CGGCTTCCTGACTGACACC 60.375 63.158 0.00 0.00 0.00 4.16
70 71 0.389166 CTCGGCTTCCTGACTGACAC 60.389 60.000 0.00 0.00 0.00 3.67
71 72 0.539669 TCTCGGCTTCCTGACTGACA 60.540 55.000 0.00 0.00 0.00 3.58
72 73 0.603569 TTCTCGGCTTCCTGACTGAC 59.396 55.000 0.00 0.00 0.00 3.51
73 74 0.603569 GTTCTCGGCTTCCTGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
74 75 0.390472 GGTTCTCGGCTTCCTGACTG 60.390 60.000 0.00 0.00 0.00 3.51
75 76 0.543174 AGGTTCTCGGCTTCCTGACT 60.543 55.000 0.00 0.00 0.00 3.41
76 77 0.108567 GAGGTTCTCGGCTTCCTGAC 60.109 60.000 0.00 0.00 0.00 3.51
77 78 0.541998 TGAGGTTCTCGGCTTCCTGA 60.542 55.000 0.00 0.00 32.35 3.86
78 79 0.390472 GTGAGGTTCTCGGCTTCCTG 60.390 60.000 0.00 0.00 32.35 3.86
79 80 1.545706 GGTGAGGTTCTCGGCTTCCT 61.546 60.000 0.00 0.00 32.35 3.36
80 81 1.079057 GGTGAGGTTCTCGGCTTCC 60.079 63.158 0.00 0.00 32.35 3.46
81 82 1.079057 GGGTGAGGTTCTCGGCTTC 60.079 63.158 0.00 0.00 32.35 3.86
82 83 1.415672 TTGGGTGAGGTTCTCGGCTT 61.416 55.000 0.00 0.00 32.35 4.35
83 84 1.415672 TTTGGGTGAGGTTCTCGGCT 61.416 55.000 0.00 0.00 32.35 5.52
84 85 0.322546 ATTTGGGTGAGGTTCTCGGC 60.323 55.000 0.00 0.00 32.35 5.54
85 86 2.200373 AATTTGGGTGAGGTTCTCGG 57.800 50.000 0.00 0.00 32.35 4.63
86 87 3.412386 AGAAATTTGGGTGAGGTTCTCG 58.588 45.455 0.00 0.00 32.35 4.04
87 88 5.301805 TCAAAGAAATTTGGGTGAGGTTCTC 59.698 40.000 0.00 0.00 32.99 2.87
88 89 5.208121 TCAAAGAAATTTGGGTGAGGTTCT 58.792 37.500 0.00 0.00 32.99 3.01
89 90 5.529581 TCAAAGAAATTTGGGTGAGGTTC 57.470 39.130 0.00 0.00 32.99 3.62
90 91 6.290605 CAATCAAAGAAATTTGGGTGAGGTT 58.709 36.000 0.00 0.00 32.99 3.50
91 92 5.742838 GCAATCAAAGAAATTTGGGTGAGGT 60.743 40.000 0.00 0.00 32.99 3.85
92 93 4.692155 GCAATCAAAGAAATTTGGGTGAGG 59.308 41.667 0.00 0.00 32.99 3.86
93 94 5.299148 TGCAATCAAAGAAATTTGGGTGAG 58.701 37.500 0.00 0.00 32.99 3.51
94 95 5.287674 TGCAATCAAAGAAATTTGGGTGA 57.712 34.783 0.00 0.00 32.99 4.02
95 96 5.528320 AGTTGCAATCAAAGAAATTTGGGTG 59.472 36.000 0.59 1.83 33.37 4.61
96 97 5.528320 CAGTTGCAATCAAAGAAATTTGGGT 59.472 36.000 0.59 0.00 33.37 4.51
97 98 5.759273 TCAGTTGCAATCAAAGAAATTTGGG 59.241 36.000 0.59 0.00 33.37 4.12
98 99 6.847956 TCAGTTGCAATCAAAGAAATTTGG 57.152 33.333 0.59 0.00 33.37 3.28
115 116 2.439409 TGGTCCAGATTGCATCAGTTG 58.561 47.619 0.00 0.00 0.00 3.16
116 117 2.885135 TGGTCCAGATTGCATCAGTT 57.115 45.000 0.00 0.00 0.00 3.16
117 118 3.181447 CCTATGGTCCAGATTGCATCAGT 60.181 47.826 0.00 0.00 0.00 3.41
118 119 3.409570 CCTATGGTCCAGATTGCATCAG 58.590 50.000 0.00 0.00 0.00 2.90
119 120 2.487805 GCCTATGGTCCAGATTGCATCA 60.488 50.000 0.00 0.00 0.00 3.07
120 121 2.157738 GCCTATGGTCCAGATTGCATC 58.842 52.381 0.00 0.00 0.00 3.91
121 122 1.496001 TGCCTATGGTCCAGATTGCAT 59.504 47.619 6.73 0.00 0.00 3.96
122 123 0.918258 TGCCTATGGTCCAGATTGCA 59.082 50.000 6.73 6.73 0.00 4.08
123 124 2.157738 GATGCCTATGGTCCAGATTGC 58.842 52.381 0.00 0.00 0.00 3.56
124 125 3.784511 AGATGCCTATGGTCCAGATTG 57.215 47.619 0.00 0.00 0.00 2.67
125 126 4.472833 GGATAGATGCCTATGGTCCAGATT 59.527 45.833 0.00 0.00 35.81 2.40
126 127 4.036518 GGATAGATGCCTATGGTCCAGAT 58.963 47.826 0.00 0.00 35.81 2.90
127 128 3.181407 TGGATAGATGCCTATGGTCCAGA 60.181 47.826 0.00 0.00 35.81 3.86
128 129 3.176411 TGGATAGATGCCTATGGTCCAG 58.824 50.000 0.00 0.00 35.81 3.86
129 130 3.274281 TGGATAGATGCCTATGGTCCA 57.726 47.619 0.00 0.00 35.81 4.02
130 131 5.604231 TCATATGGATAGATGCCTATGGTCC 59.396 44.000 2.13 0.00 35.81 4.46
131 132 6.737720 TCATATGGATAGATGCCTATGGTC 57.262 41.667 2.13 0.00 35.81 4.02
132 133 7.075851 CATCATATGGATAGATGCCTATGGT 57.924 40.000 2.13 0.00 35.81 3.55
140 141 6.981559 CAGACTCTGCATCATATGGATAGATG 59.018 42.308 2.13 0.00 41.50 2.90
141 142 6.896307 TCAGACTCTGCATCATATGGATAGAT 59.104 38.462 2.13 0.00 33.95 1.98
142 143 6.251471 TCAGACTCTGCATCATATGGATAGA 58.749 40.000 2.13 1.93 33.95 1.98
143 144 6.527057 TCAGACTCTGCATCATATGGATAG 57.473 41.667 2.13 0.00 33.95 2.08
144 145 6.923199 TTCAGACTCTGCATCATATGGATA 57.077 37.500 2.13 0.00 33.95 2.59
145 146 5.820404 TTCAGACTCTGCATCATATGGAT 57.180 39.130 2.13 0.00 36.39 3.41
146 147 5.548406 CATTCAGACTCTGCATCATATGGA 58.452 41.667 2.13 0.00 0.00 3.41
147 148 4.154375 GCATTCAGACTCTGCATCATATGG 59.846 45.833 2.13 0.00 35.96 2.74
148 149 4.998033 AGCATTCAGACTCTGCATCATATG 59.002 41.667 0.62 0.00 38.37 1.78
149 150 5.230323 AGCATTCAGACTCTGCATCATAT 57.770 39.130 0.62 0.00 38.37 1.78
150 151 4.684484 AGCATTCAGACTCTGCATCATA 57.316 40.909 0.62 0.00 38.37 2.15
151 152 3.562343 AGCATTCAGACTCTGCATCAT 57.438 42.857 0.62 0.00 38.37 2.45
152 153 3.345508 AAGCATTCAGACTCTGCATCA 57.654 42.857 0.62 0.00 38.37 3.07
153 154 3.688185 TCAAAGCATTCAGACTCTGCATC 59.312 43.478 0.62 0.00 38.37 3.91
154 155 3.682696 TCAAAGCATTCAGACTCTGCAT 58.317 40.909 0.62 0.00 38.37 3.96
155 156 3.072211 CTCAAAGCATTCAGACTCTGCA 58.928 45.455 0.62 0.00 38.37 4.41
156 157 3.072944 ACTCAAAGCATTCAGACTCTGC 58.927 45.455 0.62 0.00 36.15 4.26
157 158 5.237996 TCAAACTCAAAGCATTCAGACTCTG 59.762 40.000 0.00 0.00 0.00 3.35
158 159 5.371526 TCAAACTCAAAGCATTCAGACTCT 58.628 37.500 0.00 0.00 0.00 3.24
159 160 5.679734 TCAAACTCAAAGCATTCAGACTC 57.320 39.130 0.00 0.00 0.00 3.36
160 161 5.533903 ACATCAAACTCAAAGCATTCAGACT 59.466 36.000 0.00 0.00 0.00 3.24
161 162 5.628193 CACATCAAACTCAAAGCATTCAGAC 59.372 40.000 0.00 0.00 0.00 3.51
162 163 5.300034 ACACATCAAACTCAAAGCATTCAGA 59.700 36.000 0.00 0.00 0.00 3.27
163 164 5.526115 ACACATCAAACTCAAAGCATTCAG 58.474 37.500 0.00 0.00 0.00 3.02
164 165 5.518848 ACACATCAAACTCAAAGCATTCA 57.481 34.783 0.00 0.00 0.00 2.57
165 166 5.403466 GGAACACATCAAACTCAAAGCATTC 59.597 40.000 0.00 0.00 0.00 2.67
166 167 5.291971 GGAACACATCAAACTCAAAGCATT 58.708 37.500 0.00 0.00 0.00 3.56
167 168 4.557296 CGGAACACATCAAACTCAAAGCAT 60.557 41.667 0.00 0.00 0.00 3.79
168 169 3.243035 CGGAACACATCAAACTCAAAGCA 60.243 43.478 0.00 0.00 0.00 3.91
169 170 3.243068 ACGGAACACATCAAACTCAAAGC 60.243 43.478 0.00 0.00 0.00 3.51
170 171 4.282068 CACGGAACACATCAAACTCAAAG 58.718 43.478 0.00 0.00 0.00 2.77
171 172 3.066064 CCACGGAACACATCAAACTCAAA 59.934 43.478 0.00 0.00 0.00 2.69
172 173 2.616376 CCACGGAACACATCAAACTCAA 59.384 45.455 0.00 0.00 0.00 3.02
173 174 2.217750 CCACGGAACACATCAAACTCA 58.782 47.619 0.00 0.00 0.00 3.41
174 175 2.218603 ACCACGGAACACATCAAACTC 58.781 47.619 0.00 0.00 0.00 3.01
175 176 2.341846 ACCACGGAACACATCAAACT 57.658 45.000 0.00 0.00 0.00 2.66
176 177 3.066203 AGAAACCACGGAACACATCAAAC 59.934 43.478 0.00 0.00 0.00 2.93
177 178 3.066064 CAGAAACCACGGAACACATCAAA 59.934 43.478 0.00 0.00 0.00 2.69
178 179 2.616376 CAGAAACCACGGAACACATCAA 59.384 45.455 0.00 0.00 0.00 2.57
179 180 2.217750 CAGAAACCACGGAACACATCA 58.782 47.619 0.00 0.00 0.00 3.07
180 181 1.069227 GCAGAAACCACGGAACACATC 60.069 52.381 0.00 0.00 0.00 3.06
181 182 0.951558 GCAGAAACCACGGAACACAT 59.048 50.000 0.00 0.00 0.00 3.21
182 183 1.098712 GGCAGAAACCACGGAACACA 61.099 55.000 0.00 0.00 0.00 3.72
183 184 1.652563 GGCAGAAACCACGGAACAC 59.347 57.895 0.00 0.00 0.00 3.32
184 185 1.527380 GGGCAGAAACCACGGAACA 60.527 57.895 0.00 0.00 0.00 3.18
185 186 0.893727 ATGGGCAGAAACCACGGAAC 60.894 55.000 0.00 0.00 41.58 3.62
186 187 0.608035 GATGGGCAGAAACCACGGAA 60.608 55.000 0.00 0.00 41.58 4.30
187 188 1.002624 GATGGGCAGAAACCACGGA 60.003 57.895 0.00 0.00 41.58 4.69
188 189 1.002134 AGATGGGCAGAAACCACGG 60.002 57.895 0.00 0.00 41.58 4.94
189 190 0.321564 TCAGATGGGCAGAAACCACG 60.322 55.000 0.00 0.00 41.58 4.94
190 191 1.457346 CTCAGATGGGCAGAAACCAC 58.543 55.000 0.00 0.00 41.58 4.16
191 192 0.329261 CCTCAGATGGGCAGAAACCA 59.671 55.000 0.00 0.00 43.22 3.67
192 193 0.620556 TCCTCAGATGGGCAGAAACC 59.379 55.000 0.00 0.00 0.00 3.27
193 194 2.725221 ATCCTCAGATGGGCAGAAAC 57.275 50.000 0.00 0.00 0.00 2.78
194 195 3.523157 TGTTATCCTCAGATGGGCAGAAA 59.477 43.478 0.00 0.00 33.67 2.52
195 196 3.114606 TGTTATCCTCAGATGGGCAGAA 58.885 45.455 0.00 0.00 33.67 3.02
196 197 2.763039 TGTTATCCTCAGATGGGCAGA 58.237 47.619 0.00 0.00 33.67 4.26
197 198 3.474600 CTTGTTATCCTCAGATGGGCAG 58.525 50.000 0.00 0.00 33.67 4.85
198 199 2.173356 CCTTGTTATCCTCAGATGGGCA 59.827 50.000 0.00 0.00 33.67 5.36
199 200 2.439507 TCCTTGTTATCCTCAGATGGGC 59.560 50.000 0.00 0.00 33.67 5.36
200 201 3.455910 TGTCCTTGTTATCCTCAGATGGG 59.544 47.826 0.00 0.00 33.67 4.00
201 202 4.760530 TGTCCTTGTTATCCTCAGATGG 57.239 45.455 0.00 0.00 33.67 3.51
202 203 5.583854 CAGTTGTCCTTGTTATCCTCAGATG 59.416 44.000 0.00 0.00 33.67 2.90
203 204 5.738909 CAGTTGTCCTTGTTATCCTCAGAT 58.261 41.667 0.00 0.00 36.44 2.90
204 205 4.563580 GCAGTTGTCCTTGTTATCCTCAGA 60.564 45.833 0.00 0.00 0.00 3.27
205 206 3.686726 GCAGTTGTCCTTGTTATCCTCAG 59.313 47.826 0.00 0.00 0.00 3.35
206 207 3.674997 GCAGTTGTCCTTGTTATCCTCA 58.325 45.455 0.00 0.00 0.00 3.86
207 208 2.673368 CGCAGTTGTCCTTGTTATCCTC 59.327 50.000 0.00 0.00 0.00 3.71
208 209 2.615493 CCGCAGTTGTCCTTGTTATCCT 60.615 50.000 0.00 0.00 0.00 3.24
209 210 1.737793 CCGCAGTTGTCCTTGTTATCC 59.262 52.381 0.00 0.00 0.00 2.59
210 211 1.130561 GCCGCAGTTGTCCTTGTTATC 59.869 52.381 0.00 0.00 0.00 1.75
211 212 1.165270 GCCGCAGTTGTCCTTGTTAT 58.835 50.000 0.00 0.00 0.00 1.89
212 213 1.225376 CGCCGCAGTTGTCCTTGTTA 61.225 55.000 0.00 0.00 0.00 2.41
213 214 2.542907 CGCCGCAGTTGTCCTTGTT 61.543 57.895 0.00 0.00 0.00 2.83
214 215 2.972505 CGCCGCAGTTGTCCTTGT 60.973 61.111 0.00 0.00 0.00 3.16
215 216 4.389576 GCGCCGCAGTTGTCCTTG 62.390 66.667 3.15 0.00 0.00 3.61
216 217 4.927782 TGCGCCGCAGTTGTCCTT 62.928 61.111 8.16 0.00 33.32 3.36
217 218 4.927782 TTGCGCCGCAGTTGTCCT 62.928 61.111 13.13 0.00 40.61 3.85
218 219 4.389576 CTTGCGCCGCAGTTGTCC 62.390 66.667 13.13 0.00 40.61 4.02
231 232 1.512734 CATCGTCAAAGCGGCTTGC 60.513 57.895 17.16 8.85 46.98 4.01
232 233 0.516877 TTCATCGTCAAAGCGGCTTG 59.483 50.000 17.16 10.54 0.00 4.01
233 234 0.798776 CTTCATCGTCAAAGCGGCTT 59.201 50.000 9.94 9.94 0.00 4.35
234 235 0.037326 TCTTCATCGTCAAAGCGGCT 60.037 50.000 0.00 0.00 0.00 5.52
235 236 0.095417 GTCTTCATCGTCAAAGCGGC 59.905 55.000 0.00 0.00 0.00 6.53
236 237 1.714794 AGTCTTCATCGTCAAAGCGG 58.285 50.000 0.00 0.00 0.00 5.52
237 238 2.092838 GGAAGTCTTCATCGTCAAAGCG 59.907 50.000 14.49 0.00 0.00 4.68
238 239 3.330267 AGGAAGTCTTCATCGTCAAAGC 58.670 45.455 14.49 0.00 0.00 3.51
239 240 4.815269 AGAGGAAGTCTTCATCGTCAAAG 58.185 43.478 18.76 0.00 44.60 2.77
240 241 4.873746 AGAGGAAGTCTTCATCGTCAAA 57.126 40.909 18.76 0.00 44.60 2.69
241 242 4.873746 AAGAGGAAGTCTTCATCGTCAA 57.126 40.909 18.76 0.00 42.26 3.18
257 258 2.420372 TCAGTCATTCTCGTCGAAGAGG 59.580 50.000 25.01 11.69 44.69 3.69
258 259 3.748868 TCAGTCATTCTCGTCGAAGAG 57.251 47.619 20.68 20.68 36.95 2.85
259 260 4.023107 AGTTTCAGTCATTCTCGTCGAAGA 60.023 41.667 0.03 0.03 34.56 2.87
260 261 4.230657 AGTTTCAGTCATTCTCGTCGAAG 58.769 43.478 0.00 0.00 34.56 3.79
261 262 4.238761 AGTTTCAGTCATTCTCGTCGAA 57.761 40.909 0.00 0.00 35.78 3.71
262 263 3.917329 AGTTTCAGTCATTCTCGTCGA 57.083 42.857 0.00 0.00 0.00 4.20
263 264 3.981416 TGAAGTTTCAGTCATTCTCGTCG 59.019 43.478 0.00 0.00 32.50 5.12
276 277 3.884895 TCTTCTTGTGCCTGAAGTTTCA 58.115 40.909 0.00 0.00 40.20 2.69
277 278 4.900635 TTCTTCTTGTGCCTGAAGTTTC 57.099 40.909 0.00 0.00 40.20 2.78
278 279 5.859205 ATTTCTTCTTGTGCCTGAAGTTT 57.141 34.783 0.00 0.00 40.20 2.66
279 280 5.360714 TCAATTTCTTCTTGTGCCTGAAGTT 59.639 36.000 0.00 0.00 40.20 2.66
280 281 4.889409 TCAATTTCTTCTTGTGCCTGAAGT 59.111 37.500 0.00 0.00 40.20 3.01
281 282 5.443185 TCAATTTCTTCTTGTGCCTGAAG 57.557 39.130 0.00 0.00 40.53 3.02
282 283 4.279169 CCTCAATTTCTTCTTGTGCCTGAA 59.721 41.667 0.00 0.00 0.00 3.02
283 284 3.822735 CCTCAATTTCTTCTTGTGCCTGA 59.177 43.478 0.00 0.00 0.00 3.86
284 285 3.613432 GCCTCAATTTCTTCTTGTGCCTG 60.613 47.826 0.00 0.00 0.00 4.85
285 286 2.560105 GCCTCAATTTCTTCTTGTGCCT 59.440 45.455 0.00 0.00 0.00 4.75
286 287 2.353109 GGCCTCAATTTCTTCTTGTGCC 60.353 50.000 0.00 0.00 36.35 5.01
287 288 2.353109 GGGCCTCAATTTCTTCTTGTGC 60.353 50.000 0.84 0.00 0.00 4.57
288 289 3.160269 AGGGCCTCAATTTCTTCTTGTG 58.840 45.455 0.00 0.00 0.00 3.33
289 290 3.532641 AGGGCCTCAATTTCTTCTTGT 57.467 42.857 0.00 0.00 0.00 3.16
290 291 4.879197 AAAGGGCCTCAATTTCTTCTTG 57.121 40.909 6.46 0.00 0.00 3.02
291 292 4.040829 CCAAAAGGGCCTCAATTTCTTCTT 59.959 41.667 6.46 0.00 0.00 2.52
292 293 3.580022 CCAAAAGGGCCTCAATTTCTTCT 59.420 43.478 6.46 0.00 0.00 2.85
293 294 3.324846 ACCAAAAGGGCCTCAATTTCTTC 59.675 43.478 6.46 0.00 42.05 2.87
294 295 3.317406 ACCAAAAGGGCCTCAATTTCTT 58.683 40.909 6.46 0.00 42.05 2.52
295 296 2.976440 ACCAAAAGGGCCTCAATTTCT 58.024 42.857 6.46 0.00 42.05 2.52
296 297 3.769739 AACCAAAAGGGCCTCAATTTC 57.230 42.857 6.46 0.00 42.05 2.17
297 298 4.504864 GCTAAACCAAAAGGGCCTCAATTT 60.505 41.667 6.46 0.03 42.05 1.82
298 299 3.007940 GCTAAACCAAAAGGGCCTCAATT 59.992 43.478 6.46 0.00 42.05 2.32
299 300 2.567169 GCTAAACCAAAAGGGCCTCAAT 59.433 45.455 6.46 0.00 42.05 2.57
300 301 1.967779 GCTAAACCAAAAGGGCCTCAA 59.032 47.619 6.46 0.00 42.05 3.02
301 302 1.133325 TGCTAAACCAAAAGGGCCTCA 60.133 47.619 6.46 0.00 42.05 3.86
302 303 1.546029 CTGCTAAACCAAAAGGGCCTC 59.454 52.381 6.46 0.00 42.05 4.70
303 304 1.632589 CTGCTAAACCAAAAGGGCCT 58.367 50.000 0.00 0.00 42.05 5.19
304 305 0.037326 GCTGCTAAACCAAAAGGGCC 60.037 55.000 0.00 0.00 42.05 5.80
305 306 0.678950 TGCTGCTAAACCAAAAGGGC 59.321 50.000 0.00 0.00 42.05 5.19
306 307 2.867647 GCTTGCTGCTAAACCAAAAGGG 60.868 50.000 0.00 0.00 39.97 3.95
307 308 2.407090 GCTTGCTGCTAAACCAAAAGG 58.593 47.619 0.00 0.00 38.95 3.11
325 326 1.264288 GCACGACACTTAAGCAAAGCT 59.736 47.619 1.29 0.00 42.56 3.74
326 327 1.264288 AGCACGACACTTAAGCAAAGC 59.736 47.619 1.29 0.00 38.93 3.51
327 328 3.609103 AAGCACGACACTTAAGCAAAG 57.391 42.857 1.29 0.00 41.33 2.77
328 329 3.059188 GCTAAGCACGACACTTAAGCAAA 60.059 43.478 1.29 0.00 0.00 3.68
329 330 2.478894 GCTAAGCACGACACTTAAGCAA 59.521 45.455 1.29 0.00 0.00 3.91
330 331 2.066262 GCTAAGCACGACACTTAAGCA 58.934 47.619 1.29 0.00 0.00 3.91
331 332 2.338500 AGCTAAGCACGACACTTAAGC 58.662 47.619 1.29 0.68 0.00 3.09
332 333 4.377431 CCAAAGCTAAGCACGACACTTAAG 60.377 45.833 0.00 0.00 0.00 1.85
333 334 3.496884 CCAAAGCTAAGCACGACACTTAA 59.503 43.478 0.00 0.00 0.00 1.85
334 335 3.064207 CCAAAGCTAAGCACGACACTTA 58.936 45.455 0.00 0.00 0.00 2.24
335 336 1.873591 CCAAAGCTAAGCACGACACTT 59.126 47.619 0.00 0.00 0.00 3.16
336 337 1.202651 ACCAAAGCTAAGCACGACACT 60.203 47.619 0.00 0.00 0.00 3.55
337 338 1.069906 CACCAAAGCTAAGCACGACAC 60.070 52.381 0.00 0.00 0.00 3.67
338 339 1.225855 CACCAAAGCTAAGCACGACA 58.774 50.000 0.00 0.00 0.00 4.35
339 340 0.110192 GCACCAAAGCTAAGCACGAC 60.110 55.000 0.00 0.00 0.00 4.34
340 341 1.234615 GGCACCAAAGCTAAGCACGA 61.235 55.000 0.00 0.00 34.17 4.35
341 342 1.210155 GGCACCAAAGCTAAGCACG 59.790 57.895 0.00 0.00 34.17 5.34
342 343 0.523519 GAGGCACCAAAGCTAAGCAC 59.476 55.000 0.00 0.00 34.17 4.40
343 344 0.401738 AGAGGCACCAAAGCTAAGCA 59.598 50.000 0.00 0.00 34.17 3.91
344 345 2.403252 TAGAGGCACCAAAGCTAAGC 57.597 50.000 0.00 0.00 34.17 3.09
345 346 6.599638 ACTTTAATAGAGGCACCAAAGCTAAG 59.400 38.462 0.00 0.00 34.17 2.18
346 347 6.374333 CACTTTAATAGAGGCACCAAAGCTAA 59.626 38.462 0.00 0.00 34.17 3.09
347 348 5.880332 CACTTTAATAGAGGCACCAAAGCTA 59.120 40.000 0.00 0.00 34.17 3.32
348 349 4.702131 CACTTTAATAGAGGCACCAAAGCT 59.298 41.667 0.00 0.00 34.17 3.74
349 350 4.459337 ACACTTTAATAGAGGCACCAAAGC 59.541 41.667 0.00 0.00 0.00 3.51
350 351 6.575162 AACACTTTAATAGAGGCACCAAAG 57.425 37.500 0.00 0.00 0.00 2.77
351 352 8.644374 AATAACACTTTAATAGAGGCACCAAA 57.356 30.769 0.00 0.00 0.00 3.28
352 353 9.742144 TTAATAACACTTTAATAGAGGCACCAA 57.258 29.630 0.00 0.00 0.00 3.67
353 354 9.914834 ATTAATAACACTTTAATAGAGGCACCA 57.085 29.630 0.00 0.00 29.67 4.17
367 368 8.335356 CGCATACTGCACTAATTAATAACACTT 58.665 33.333 0.00 0.00 45.36 3.16
368 369 7.518370 GCGCATACTGCACTAATTAATAACACT 60.518 37.037 0.30 0.00 45.36 3.55
369 370 6.573725 GCGCATACTGCACTAATTAATAACAC 59.426 38.462 0.30 0.00 45.36 3.32
370 371 6.258947 TGCGCATACTGCACTAATTAATAACA 59.741 34.615 5.66 0.00 45.36 2.41
371 372 6.655062 TGCGCATACTGCACTAATTAATAAC 58.345 36.000 5.66 0.00 45.36 1.89
372 373 6.852858 TGCGCATACTGCACTAATTAATAA 57.147 33.333 5.66 0.00 45.36 1.40
373 374 6.426633 ACATGCGCATACTGCACTAATTAATA 59.573 34.615 24.84 0.00 46.57 0.98
374 375 5.239306 ACATGCGCATACTGCACTAATTAAT 59.761 36.000 24.84 0.00 46.57 1.40
375 376 4.574421 ACATGCGCATACTGCACTAATTAA 59.426 37.500 24.84 0.00 46.57 1.40
376 377 4.126437 ACATGCGCATACTGCACTAATTA 58.874 39.130 24.84 0.00 46.57 1.40
377 378 2.945008 ACATGCGCATACTGCACTAATT 59.055 40.909 24.84 0.00 46.57 1.40
378 379 2.545526 GACATGCGCATACTGCACTAAT 59.454 45.455 24.84 0.00 46.57 1.73
379 380 1.933181 GACATGCGCATACTGCACTAA 59.067 47.619 24.84 0.00 46.57 2.24
380 381 1.570813 GACATGCGCATACTGCACTA 58.429 50.000 24.84 0.00 46.57 2.74
381 382 1.091771 GGACATGCGCATACTGCACT 61.092 55.000 24.84 0.00 46.57 4.40
382 383 1.353103 GGACATGCGCATACTGCAC 59.647 57.895 24.84 10.28 46.57 4.57
383 384 0.676151 TTGGACATGCGCATACTGCA 60.676 50.000 24.84 18.95 45.36 4.41
384 385 0.248215 GTTGGACATGCGCATACTGC 60.248 55.000 24.84 16.49 40.69 4.40
385 386 1.372582 AGTTGGACATGCGCATACTG 58.627 50.000 24.84 15.72 0.00 2.74
386 387 2.113860 AAGTTGGACATGCGCATACT 57.886 45.000 24.84 19.37 0.00 2.12
387 388 2.919666 AAAGTTGGACATGCGCATAC 57.080 45.000 24.84 17.25 0.00 2.39
388 389 3.373748 CACTAAAGTTGGACATGCGCATA 59.626 43.478 24.84 4.13 0.00 3.14
389 390 2.162208 CACTAAAGTTGGACATGCGCAT 59.838 45.455 19.28 19.28 0.00 4.73
390 391 1.535028 CACTAAAGTTGGACATGCGCA 59.465 47.619 14.96 14.96 0.00 6.09
391 392 1.535462 ACACTAAAGTTGGACATGCGC 59.465 47.619 0.00 0.00 0.00 6.09
392 393 5.351233 TTTACACTAAAGTTGGACATGCG 57.649 39.130 0.00 0.00 0.00 4.73
393 394 9.855021 AATAATTTACACTAAAGTTGGACATGC 57.145 29.630 0.00 0.00 0.00 4.06
426 427 8.774586 GCCAAATAATACTGGTTCATAGTACTG 58.225 37.037 5.39 0.00 33.80 2.74
427 428 8.491134 TGCCAAATAATACTGGTTCATAGTACT 58.509 33.333 0.00 0.00 33.80 2.73
428 429 8.671384 TGCCAAATAATACTGGTTCATAGTAC 57.329 34.615 0.00 0.00 33.80 2.73
429 430 9.337396 CTTGCCAAATAATACTGGTTCATAGTA 57.663 33.333 0.00 0.00 34.97 1.82
430 431 8.052748 TCTTGCCAAATAATACTGGTTCATAGT 58.947 33.333 0.00 0.00 34.97 2.12
431 432 8.345565 GTCTTGCCAAATAATACTGGTTCATAG 58.654 37.037 0.00 0.00 34.97 2.23
432 433 7.831690 TGTCTTGCCAAATAATACTGGTTCATA 59.168 33.333 0.00 0.00 34.97 2.15
433 434 6.663093 TGTCTTGCCAAATAATACTGGTTCAT 59.337 34.615 0.00 0.00 34.97 2.57
434 435 6.007076 TGTCTTGCCAAATAATACTGGTTCA 58.993 36.000 0.00 0.00 34.97 3.18
435 436 6.509418 TGTCTTGCCAAATAATACTGGTTC 57.491 37.500 0.00 0.00 34.97 3.62
436 437 6.572314 GCTTGTCTTGCCAAATAATACTGGTT 60.572 38.462 0.00 0.00 34.97 3.67
437 438 5.105756 GCTTGTCTTGCCAAATAATACTGGT 60.106 40.000 0.00 0.00 34.97 4.00
438 439 5.126061 AGCTTGTCTTGCCAAATAATACTGG 59.874 40.000 0.00 0.00 35.67 4.00
439 440 6.199937 AGCTTGTCTTGCCAAATAATACTG 57.800 37.500 0.00 0.00 0.00 2.74
440 441 5.358160 GGAGCTTGTCTTGCCAAATAATACT 59.642 40.000 0.00 0.00 0.00 2.12
441 442 5.582550 GGAGCTTGTCTTGCCAAATAATAC 58.417 41.667 0.00 0.00 0.00 1.89
442 443 4.335315 CGGAGCTTGTCTTGCCAAATAATA 59.665 41.667 0.00 0.00 0.00 0.98
443 444 3.129287 CGGAGCTTGTCTTGCCAAATAAT 59.871 43.478 0.00 0.00 0.00 1.28
444 445 2.487762 CGGAGCTTGTCTTGCCAAATAA 59.512 45.455 0.00 0.00 0.00 1.40
445 446 2.083774 CGGAGCTTGTCTTGCCAAATA 58.916 47.619 0.00 0.00 0.00 1.40
446 447 0.883833 CGGAGCTTGTCTTGCCAAAT 59.116 50.000 0.00 0.00 0.00 2.32
447 448 2.330254 CGGAGCTTGTCTTGCCAAA 58.670 52.632 0.00 0.00 0.00 3.28
448 449 4.063529 CGGAGCTTGTCTTGCCAA 57.936 55.556 0.00 0.00 0.00 4.52
486 487 2.270352 TGAAACTCCCACGCAATCTT 57.730 45.000 0.00 0.00 0.00 2.40
492 493 2.032178 GCTAATCATGAAACTCCCACGC 59.968 50.000 0.00 0.00 0.00 5.34
497 498 7.984617 AGAAGTCTTAGCTAATCATGAAACTCC 59.015 37.037 6.64 0.00 0.00 3.85
504 505 7.545265 GCCATCTAGAAGTCTTAGCTAATCATG 59.455 40.741 6.64 2.42 0.00 3.07
505 506 7.454380 AGCCATCTAGAAGTCTTAGCTAATCAT 59.546 37.037 6.64 0.00 0.00 2.45
506 507 6.780031 AGCCATCTAGAAGTCTTAGCTAATCA 59.220 38.462 6.64 0.00 0.00 2.57
507 508 7.090173 CAGCCATCTAGAAGTCTTAGCTAATC 58.910 42.308 6.64 1.52 0.00 1.75
508 509 6.518200 GCAGCCATCTAGAAGTCTTAGCTAAT 60.518 42.308 6.64 0.00 0.00 1.73
509 510 5.221342 GCAGCCATCTAGAAGTCTTAGCTAA 60.221 44.000 5.94 5.94 0.00 3.09
510 511 4.279671 GCAGCCATCTAGAAGTCTTAGCTA 59.720 45.833 0.00 0.00 0.00 3.32
511 512 3.069443 GCAGCCATCTAGAAGTCTTAGCT 59.931 47.826 0.00 0.00 0.00 3.32
512 513 3.069443 AGCAGCCATCTAGAAGTCTTAGC 59.931 47.826 0.00 0.00 0.00 3.09
513 514 4.099266 ACAGCAGCCATCTAGAAGTCTTAG 59.901 45.833 0.00 0.00 0.00 2.18
514 515 4.026744 ACAGCAGCCATCTAGAAGTCTTA 58.973 43.478 0.00 0.00 0.00 2.10
515 516 2.836981 ACAGCAGCCATCTAGAAGTCTT 59.163 45.455 0.00 0.00 0.00 3.01
516 517 2.465813 ACAGCAGCCATCTAGAAGTCT 58.534 47.619 0.00 0.00 0.00 3.24
517 518 2.977772 ACAGCAGCCATCTAGAAGTC 57.022 50.000 0.00 0.00 0.00 3.01
518 519 3.710209 AAACAGCAGCCATCTAGAAGT 57.290 42.857 0.00 0.00 0.00 3.01
519 520 4.380233 CCAAAAACAGCAGCCATCTAGAAG 60.380 45.833 0.00 0.00 0.00 2.85
520 521 3.507233 CCAAAAACAGCAGCCATCTAGAA 59.493 43.478 0.00 0.00 0.00 2.10
521 522 3.084039 CCAAAAACAGCAGCCATCTAGA 58.916 45.455 0.00 0.00 0.00 2.43
523 524 3.153369 TCCAAAAACAGCAGCCATCTA 57.847 42.857 0.00 0.00 0.00 1.98
524 525 1.999648 TCCAAAAACAGCAGCCATCT 58.000 45.000 0.00 0.00 0.00 2.90
530 531 5.107375 GCAATGTTACATCCAAAAACAGCAG 60.107 40.000 0.00 0.00 36.62 4.24
535 536 4.303282 ACGGCAATGTTACATCCAAAAAC 58.697 39.130 0.00 0.00 0.00 2.43
537 538 3.365465 CGACGGCAATGTTACATCCAAAA 60.365 43.478 0.00 0.00 0.00 2.44
549 550 1.082431 TTCAAACGCGACGGCAATG 60.082 52.632 15.93 0.47 39.92 2.82
557 558 1.221466 CTGCAGAGGTTCAAACGCGA 61.221 55.000 15.93 0.00 0.00 5.87
560 561 1.299541 ACACTGCAGAGGTTCAAACG 58.700 50.000 23.35 0.00 0.00 3.60
571 1202 0.234106 CGTCAGCTGAAACACTGCAG 59.766 55.000 20.19 13.48 44.13 4.41
592 1223 1.271656 ACTTAAGAGTTCGGACCACGG 59.728 52.381 10.09 0.00 44.45 4.94
598 1229 5.786264 AGACAGAAACTTAAGAGTTCGGA 57.214 39.130 21.02 0.00 45.18 4.55
609 1240 6.649557 CGGGATACAACTAAAGACAGAAACTT 59.350 38.462 0.00 0.00 39.74 2.66
611 1242 5.930569 ACGGGATACAACTAAAGACAGAAAC 59.069 40.000 0.00 0.00 39.74 2.78
612 1243 6.105397 ACGGGATACAACTAAAGACAGAAA 57.895 37.500 0.00 0.00 39.74 2.52
622 1257 3.091545 AGGTTCGAACGGGATACAACTA 58.908 45.455 21.34 0.00 39.74 2.24
637 1272 1.153289 CCCTCAGGCATCAGGTTCG 60.153 63.158 0.00 0.00 0.00 3.95
707 1970 0.448990 CACATCACATGGGCGTCTTG 59.551 55.000 0.00 0.00 33.60 3.02
708 1971 0.324614 TCACATCACATGGGCGTCTT 59.675 50.000 0.00 0.00 32.41 3.01
709 1972 0.543277 ATCACATCACATGGGCGTCT 59.457 50.000 0.00 0.00 32.41 4.18
710 1973 0.659427 CATCACATCACATGGGCGTC 59.341 55.000 0.00 0.00 32.41 5.19
711 1974 0.252761 TCATCACATCACATGGGCGT 59.747 50.000 0.00 0.00 32.41 5.68
712 1975 1.601166 ATCATCACATCACATGGGCG 58.399 50.000 0.00 0.00 32.41 6.13
713 1976 2.953648 TCAATCATCACATCACATGGGC 59.046 45.455 0.00 0.00 32.41 5.36
714 1977 3.317149 GGTCAATCATCACATCACATGGG 59.683 47.826 0.00 0.00 34.11 4.00
715 1978 3.002965 CGGTCAATCATCACATCACATGG 59.997 47.826 0.00 0.00 33.60 3.66
716 1979 3.002965 CCGGTCAATCATCACATCACATG 59.997 47.826 0.00 0.00 0.00 3.21
717 1980 3.208594 CCGGTCAATCATCACATCACAT 58.791 45.455 0.00 0.00 0.00 3.21
718 1981 2.027285 ACCGGTCAATCATCACATCACA 60.027 45.455 0.00 0.00 0.00 3.58
719 1982 2.609459 GACCGGTCAATCATCACATCAC 59.391 50.000 29.75 0.00 0.00 3.06
720 1983 2.235898 TGACCGGTCAATCATCACATCA 59.764 45.455 34.60 7.29 36.53 3.07
721 1984 2.905075 TGACCGGTCAATCATCACATC 58.095 47.619 34.60 4.31 36.53 3.06
780 2043 1.966762 CACCACCCAGCCAAATCAC 59.033 57.895 0.00 0.00 0.00 3.06
882 2165 6.263168 ACTTACTTGTCTTAAACTTGCATGCT 59.737 34.615 20.33 0.00 0.00 3.79
964 2260 2.101249 TCTCCTTGCTTTGCTTTGGTTG 59.899 45.455 0.00 0.00 0.00 3.77
965 2261 2.387757 TCTCCTTGCTTTGCTTTGGTT 58.612 42.857 0.00 0.00 0.00 3.67
967 2263 2.559668 TGATCTCCTTGCTTTGCTTTGG 59.440 45.455 0.00 0.00 0.00 3.28
968 2264 3.928727 TGATCTCCTTGCTTTGCTTTG 57.071 42.857 0.00 0.00 0.00 2.77
970 2266 5.443283 TGATATGATCTCCTTGCTTTGCTT 58.557 37.500 0.00 0.00 0.00 3.91
972 2268 5.472478 TGATGATATGATCTCCTTGCTTTGC 59.528 40.000 3.75 0.00 0.00 3.68
976 2272 7.017319 TGAATGATGATATGATCTCCTTGCT 57.983 36.000 3.75 0.00 0.00 3.91
978 2274 7.201741 GCCATGAATGATGATATGATCTCCTTG 60.202 40.741 3.75 2.32 33.31 3.61
979 2275 6.829298 GCCATGAATGATGATATGATCTCCTT 59.171 38.462 3.75 0.00 33.31 3.36
990 2286 1.239296 CGGGCGCCATGAATGATGAT 61.239 55.000 30.85 0.00 33.31 2.45
991 2287 1.893335 CGGGCGCCATGAATGATGA 60.893 57.895 30.85 0.00 33.31 2.92
992 2288 2.640989 CGGGCGCCATGAATGATG 59.359 61.111 30.85 1.52 0.00 3.07
993 2289 2.595463 CCGGGCGCCATGAATGAT 60.595 61.111 30.85 0.00 0.00 2.45
1015 2311 2.435059 GAGGCCGAGGAGCACAAC 60.435 66.667 0.00 0.00 0.00 3.32
1116 2412 1.363807 GTCCTTGTGCTTGTTGCCC 59.636 57.895 0.00 0.00 42.00 5.36
1138 2437 1.734047 CGAAGGCGAGGAAGAAGACTG 60.734 57.143 0.00 0.00 40.82 3.51
1139 2438 0.528470 CGAAGGCGAGGAAGAAGACT 59.472 55.000 0.00 0.00 40.82 3.24
1140 2439 0.244178 ACGAAGGCGAGGAAGAAGAC 59.756 55.000 0.00 0.00 41.64 3.01
1192 2506 5.372373 CTTCTTGTCCTTCTTCTCCTTGTT 58.628 41.667 0.00 0.00 0.00 2.83
1193 2507 4.202409 CCTTCTTGTCCTTCTTCTCCTTGT 60.202 45.833 0.00 0.00 0.00 3.16
1194 2508 4.040952 TCCTTCTTGTCCTTCTTCTCCTTG 59.959 45.833 0.00 0.00 0.00 3.61
1195 2509 4.235372 TCCTTCTTGTCCTTCTTCTCCTT 58.765 43.478 0.00 0.00 0.00 3.36
1196 2510 3.837731 CTCCTTCTTGTCCTTCTTCTCCT 59.162 47.826 0.00 0.00 0.00 3.69
1197 2511 3.835395 TCTCCTTCTTGTCCTTCTTCTCC 59.165 47.826 0.00 0.00 0.00 3.71
1198 2512 5.476091 TTCTCCTTCTTGTCCTTCTTCTC 57.524 43.478 0.00 0.00 0.00 2.87
1199 2513 4.262851 GCTTCTCCTTCTTGTCCTTCTTCT 60.263 45.833 0.00 0.00 0.00 2.85
1200 2514 4.000325 GCTTCTCCTTCTTGTCCTTCTTC 59.000 47.826 0.00 0.00 0.00 2.87
1344 2664 3.561120 CTTGGCCCGCACCTGGTTA 62.561 63.158 0.00 0.00 0.00 2.85
1485 2805 4.722700 CACCCGGTGCCCCAGAAG 62.723 72.222 4.16 0.00 0.00 2.85
1743 3063 8.736244 GGGCTACTACTGAATGAATTAACAAAA 58.264 33.333 0.00 0.00 0.00 2.44
1744 3064 7.885922 TGGGCTACTACTGAATGAATTAACAAA 59.114 33.333 0.00 0.00 0.00 2.83
1747 3067 8.451908 AATGGGCTACTACTGAATGAATTAAC 57.548 34.615 0.00 0.00 0.00 2.01
1748 3068 8.902806 CAAATGGGCTACTACTGAATGAATTAA 58.097 33.333 0.00 0.00 0.00 1.40
1751 3071 5.300286 GCAAATGGGCTACTACTGAATGAAT 59.700 40.000 0.00 0.00 0.00 2.57
1753 3073 4.199310 GCAAATGGGCTACTACTGAATGA 58.801 43.478 0.00 0.00 0.00 2.57
1754 3074 3.316308 GGCAAATGGGCTACTACTGAATG 59.684 47.826 0.00 0.00 39.42 2.67
1756 3076 2.999331 GGCAAATGGGCTACTACTGAA 58.001 47.619 0.00 0.00 39.42 3.02
1757 3077 2.710096 GGCAAATGGGCTACTACTGA 57.290 50.000 0.00 0.00 39.42 3.41
1805 3125 2.688666 TAGTCCAGCCCAGCCCAG 60.689 66.667 0.00 0.00 0.00 4.45
1806 3126 3.009115 GTAGTCCAGCCCAGCCCA 61.009 66.667 0.00 0.00 0.00 5.36
1807 3127 3.009115 TGTAGTCCAGCCCAGCCC 61.009 66.667 0.00 0.00 0.00 5.19
1808 3128 2.269241 GTGTAGTCCAGCCCAGCC 59.731 66.667 0.00 0.00 0.00 4.85
1809 3129 2.245438 GAGGTGTAGTCCAGCCCAGC 62.245 65.000 0.00 0.00 42.69 4.85
1810 3130 0.904865 TGAGGTGTAGTCCAGCCCAG 60.905 60.000 0.00 0.00 42.69 4.45
1811 3131 0.472925 TTGAGGTGTAGTCCAGCCCA 60.473 55.000 0.00 0.00 42.69 5.36
1812 3132 0.250513 CTTGAGGTGTAGTCCAGCCC 59.749 60.000 0.00 0.00 42.69 5.19
1813 3133 0.977395 ACTTGAGGTGTAGTCCAGCC 59.023 55.000 0.00 0.00 42.69 4.85
1814 3134 2.841442 AACTTGAGGTGTAGTCCAGC 57.159 50.000 0.00 0.00 42.00 4.85
1829 3150 9.974980 TCCGCTAATAAAAGAAAATGAAAACTT 57.025 25.926 0.00 0.00 0.00 2.66
1831 3152 9.406828 AGTCCGCTAATAAAAGAAAATGAAAAC 57.593 29.630 0.00 0.00 0.00 2.43
1847 3168 3.702045 AGAAGACAAGCTAGTCCGCTAAT 59.298 43.478 0.00 0.00 39.86 1.73
1854 3178 8.800031 CGAGTAAATTAAGAAGACAAGCTAGTC 58.200 37.037 0.00 0.00 38.81 2.59
1905 3229 4.511454 GCACCGAGCATAGTTCATATTTGA 59.489 41.667 0.00 0.00 44.79 2.69
1906 3230 4.776743 GCACCGAGCATAGTTCATATTTG 58.223 43.478 0.00 0.00 44.79 2.32
1943 5814 9.346725 GAACCATGAAATGTCTATCTTTTTGTC 57.653 33.333 0.00 0.00 44.81 3.18
1954 5825 2.821969 GTGCTGGAACCATGAAATGTCT 59.178 45.455 0.00 0.00 44.81 3.41
1955 5826 2.414559 CGTGCTGGAACCATGAAATGTC 60.415 50.000 0.00 0.00 44.81 3.06
1956 5827 1.541147 CGTGCTGGAACCATGAAATGT 59.459 47.619 0.00 0.00 44.81 2.71
1957 5828 1.733389 GCGTGCTGGAACCATGAAATG 60.733 52.381 0.00 0.00 46.21 2.32
1976 5847 4.082571 ACTCTGTTGCTGAATTATTGGTGC 60.083 41.667 0.00 0.00 0.00 5.01
1977 5848 5.633830 ACTCTGTTGCTGAATTATTGGTG 57.366 39.130 0.00 0.00 0.00 4.17
1978 5849 5.769662 TGAACTCTGTTGCTGAATTATTGGT 59.230 36.000 0.00 0.00 0.00 3.67
1980 5851 8.024865 TGAATGAACTCTGTTGCTGAATTATTG 58.975 33.333 0.00 0.00 0.00 1.90
1982 5853 7.627939 GCTGAATGAACTCTGTTGCTGAATTAT 60.628 37.037 0.00 0.00 0.00 1.28
1986 5857 3.251729 GCTGAATGAACTCTGTTGCTGAA 59.748 43.478 0.00 0.00 0.00 3.02
1987 5858 2.810274 GCTGAATGAACTCTGTTGCTGA 59.190 45.455 0.00 0.00 0.00 4.26
1988 5859 2.551032 TGCTGAATGAACTCTGTTGCTG 59.449 45.455 0.00 0.00 0.00 4.41
1991 5862 3.811497 TCTGTGCTGAATGAACTCTGTTG 59.189 43.478 0.00 0.00 0.00 3.33
1993 5864 3.323115 TCTCTGTGCTGAATGAACTCTGT 59.677 43.478 0.00 0.00 0.00 3.41
1996 5867 4.329528 GTGATCTCTGTGCTGAATGAACTC 59.670 45.833 0.00 0.00 0.00 3.01
1998 5869 3.373439 GGTGATCTCTGTGCTGAATGAAC 59.627 47.826 0.00 0.00 0.00 3.18
2001 5872 2.981898 TGGTGATCTCTGTGCTGAATG 58.018 47.619 0.00 0.00 0.00 2.67
2005 5876 5.587443 TGAATTATTGGTGATCTCTGTGCTG 59.413 40.000 0.00 0.00 0.00 4.41
2007 5878 5.505324 GCTGAATTATTGGTGATCTCTGTGC 60.505 44.000 0.00 0.00 0.00 4.57
2008 5879 5.587443 TGCTGAATTATTGGTGATCTCTGTG 59.413 40.000 0.00 0.00 0.00 3.66
2009 5880 5.748402 TGCTGAATTATTGGTGATCTCTGT 58.252 37.500 0.00 0.00 0.00 3.41
2012 5883 6.317140 TCTGTTGCTGAATTATTGGTGATCTC 59.683 38.462 0.00 0.00 0.00 2.75
2013 5884 6.182627 TCTGTTGCTGAATTATTGGTGATCT 58.817 36.000 0.00 0.00 0.00 2.75
2014 5885 6.094603 ACTCTGTTGCTGAATTATTGGTGATC 59.905 38.462 0.00 0.00 0.00 2.92
2020 5891 8.024865 TGAATGAACTCTGTTGCTGAATTATTG 58.975 33.333 0.00 0.00 0.00 1.90
2025 5896 4.082895 GCTGAATGAACTCTGTTGCTGAAT 60.083 41.667 0.00 0.00 0.00 2.57
2028 5899 2.551032 TGCTGAATGAACTCTGTTGCTG 59.449 45.455 0.00 0.00 0.00 4.41
2031 5902 3.811497 TCTGTGCTGAATGAACTCTGTTG 59.189 43.478 0.00 0.00 0.00 3.33
2032 5903 4.063689 CTCTGTGCTGAATGAACTCTGTT 58.936 43.478 0.00 0.00 0.00 3.16
2033 5904 3.323115 TCTCTGTGCTGAATGAACTCTGT 59.677 43.478 0.00 0.00 0.00 3.41
2034 5905 3.922910 TCTCTGTGCTGAATGAACTCTG 58.077 45.455 0.00 0.00 0.00 3.35
2035 5906 4.222366 TGATCTCTGTGCTGAATGAACTCT 59.778 41.667 0.00 0.00 0.00 3.24
2036 5907 4.329528 GTGATCTCTGTGCTGAATGAACTC 59.670 45.833 0.00 0.00 0.00 3.01
2037 5908 4.252073 GTGATCTCTGTGCTGAATGAACT 58.748 43.478 0.00 0.00 0.00 3.01
2038 5909 3.373439 GGTGATCTCTGTGCTGAATGAAC 59.627 47.826 0.00 0.00 0.00 3.18
2041 5912 2.981898 TGGTGATCTCTGTGCTGAATG 58.018 47.619 0.00 0.00 0.00 2.67
2043 5914 3.708403 ATTGGTGATCTCTGTGCTGAA 57.292 42.857 0.00 0.00 0.00 3.02
2045 5916 5.587443 TGAATTATTGGTGATCTCTGTGCTG 59.413 40.000 0.00 0.00 0.00 4.41
2046 5917 5.748402 TGAATTATTGGTGATCTCTGTGCT 58.252 37.500 0.00 0.00 0.00 4.40
2047 5918 5.505324 GCTGAATTATTGGTGATCTCTGTGC 60.505 44.000 0.00 0.00 0.00 4.57
2050 5921 6.094464 TGTTGCTGAATTATTGGTGATCTCTG 59.906 38.462 0.00 0.00 0.00 3.35
2052 5923 6.317140 TCTGTTGCTGAATTATTGGTGATCTC 59.683 38.462 0.00 0.00 0.00 2.75
2053 5924 6.182627 TCTGTTGCTGAATTATTGGTGATCT 58.817 36.000 0.00 0.00 0.00 2.75
2054 5925 6.094603 ACTCTGTTGCTGAATTATTGGTGATC 59.905 38.462 0.00 0.00 0.00 2.92
2055 5926 5.948162 ACTCTGTTGCTGAATTATTGGTGAT 59.052 36.000 0.00 0.00 0.00 3.06
2056 5927 5.316167 ACTCTGTTGCTGAATTATTGGTGA 58.684 37.500 0.00 0.00 0.00 4.02
2057 5928 5.633830 ACTCTGTTGCTGAATTATTGGTG 57.366 39.130 0.00 0.00 0.00 4.17
2058 5929 5.769662 TGAACTCTGTTGCTGAATTATTGGT 59.230 36.000 0.00 0.00 0.00 3.67
2059 5930 6.258230 TGAACTCTGTTGCTGAATTATTGG 57.742 37.500 0.00 0.00 0.00 3.16
2063 5934 6.348786 GCTGAATGAACTCTGTTGCTGAATTA 60.349 38.462 0.00 0.00 0.00 1.40
2064 5935 5.564259 GCTGAATGAACTCTGTTGCTGAATT 60.564 40.000 0.00 0.00 0.00 2.17
2065 5936 4.082895 GCTGAATGAACTCTGTTGCTGAAT 60.083 41.667 0.00 0.00 0.00 2.57
2067 5938 2.810274 GCTGAATGAACTCTGTTGCTGA 59.190 45.455 0.00 0.00 0.00 4.26
2069 5940 2.551459 GTGCTGAATGAACTCTGTTGCT 59.449 45.455 0.00 0.00 0.00 3.91
2070 5941 2.291465 TGTGCTGAATGAACTCTGTTGC 59.709 45.455 0.00 0.00 0.00 4.17
2071 5942 3.811497 TCTGTGCTGAATGAACTCTGTTG 59.189 43.478 0.00 0.00 0.00 3.33
2072 5943 4.063689 CTCTGTGCTGAATGAACTCTGTT 58.936 43.478 0.00 0.00 0.00 3.16
2073 5944 3.323115 TCTCTGTGCTGAATGAACTCTGT 59.677 43.478 0.00 0.00 0.00 3.41
2074 5945 3.922910 TCTCTGTGCTGAATGAACTCTG 58.077 45.455 0.00 0.00 0.00 3.35
2075 5946 4.222366 TGATCTCTGTGCTGAATGAACTCT 59.778 41.667 0.00 0.00 0.00 3.24
2076 5947 4.329528 GTGATCTCTGTGCTGAATGAACTC 59.670 45.833 0.00 0.00 0.00 3.01
2079 5950 3.008266 TGGTGATCTCTGTGCTGAATGAA 59.992 43.478 0.00 0.00 0.00 2.57
2080 5951 2.568509 TGGTGATCTCTGTGCTGAATGA 59.431 45.455 0.00 0.00 0.00 2.57
2081 5952 2.981898 TGGTGATCTCTGTGCTGAATG 58.018 47.619 0.00 0.00 0.00 2.67
2083 5954 3.708403 ATTGGTGATCTCTGTGCTGAA 57.292 42.857 0.00 0.00 0.00 3.02
2084 5955 4.824479 TTATTGGTGATCTCTGTGCTGA 57.176 40.909 0.00 0.00 0.00 4.26
2085 5956 5.587443 TGAATTATTGGTGATCTCTGTGCTG 59.413 40.000 0.00 0.00 0.00 4.41
2086 5957 5.748402 TGAATTATTGGTGATCTCTGTGCT 58.252 37.500 0.00 0.00 0.00 4.40
2087 5958 5.505324 GCTGAATTATTGGTGATCTCTGTGC 60.505 44.000 0.00 0.00 0.00 4.57
2088 5959 5.587443 TGCTGAATTATTGGTGATCTCTGTG 59.413 40.000 0.00 0.00 0.00 3.66
2089 5960 5.748402 TGCTGAATTATTGGTGATCTCTGT 58.252 37.500 0.00 0.00 0.00 3.41
2090 5961 6.094464 TGTTGCTGAATTATTGGTGATCTCTG 59.906 38.462 0.00 0.00 0.00 3.35
2091 5962 6.182627 TGTTGCTGAATTATTGGTGATCTCT 58.817 36.000 0.00 0.00 0.00 3.10
2092 5963 6.317140 TCTGTTGCTGAATTATTGGTGATCTC 59.683 38.462 0.00 0.00 0.00 2.75
2094 5965 6.094603 ACTCTGTTGCTGAATTATTGGTGATC 59.905 38.462 0.00 0.00 0.00 2.92
2096 5967 5.316167 ACTCTGTTGCTGAATTATTGGTGA 58.684 37.500 0.00 0.00 0.00 4.02
2098 5969 5.769662 TGAACTCTGTTGCTGAATTATTGGT 59.230 36.000 0.00 0.00 0.00 3.67
2099 5970 6.258230 TGAACTCTGTTGCTGAATTATTGG 57.742 37.500 0.00 0.00 0.00 3.16
2100 5971 8.024865 TGAATGAACTCTGTTGCTGAATTATTG 58.975 33.333 0.00 0.00 0.00 1.90
2101 5972 8.114331 TGAATGAACTCTGTTGCTGAATTATT 57.886 30.769 0.00 0.00 0.00 1.40
2102 5973 7.627939 GCTGAATGAACTCTGTTGCTGAATTAT 60.628 37.037 0.00 0.00 0.00 1.28
2103 5974 6.348786 GCTGAATGAACTCTGTTGCTGAATTA 60.349 38.462 0.00 0.00 0.00 1.40
2104 5975 5.564259 GCTGAATGAACTCTGTTGCTGAATT 60.564 40.000 0.00 0.00 0.00 2.17
2105 5976 4.082895 GCTGAATGAACTCTGTTGCTGAAT 60.083 41.667 0.00 0.00 0.00 2.57
2107 5978 2.810274 GCTGAATGAACTCTGTTGCTGA 59.190 45.455 0.00 0.00 0.00 4.26
2110 5981 2.291465 TGTGCTGAATGAACTCTGTTGC 59.709 45.455 0.00 0.00 0.00 4.17
2118 5989 2.771089 TGGTCTCTGTGCTGAATGAAC 58.229 47.619 0.00 0.00 0.00 3.18
2172 6043 6.293027 GCTTGGTTCATTTTGTTGATTCTTGG 60.293 38.462 0.00 0.00 0.00 3.61
2261 6139 7.018550 TGGTTCCCTTGCCTCATAGAAATATAT 59.981 37.037 0.00 0.00 0.00 0.86
2262 6140 6.331572 TGGTTCCCTTGCCTCATAGAAATATA 59.668 38.462 0.00 0.00 0.00 0.86
2263 6141 5.134339 TGGTTCCCTTGCCTCATAGAAATAT 59.866 40.000 0.00 0.00 0.00 1.28
2272 6459 1.152830 GGTTGGTTCCCTTGCCTCA 59.847 57.895 0.00 0.00 0.00 3.86
2273 6460 0.178961 AAGGTTGGTTCCCTTGCCTC 60.179 55.000 0.00 0.00 40.79 4.70
2318 6509 6.443792 TCGCGTTAGAAAGCTAATCATATCA 58.556 36.000 5.77 0.00 38.74 2.15
2390 6581 7.072708 AGACTACTACTGATGTGTATAGGGAGT 59.927 40.741 0.00 0.00 0.00 3.85
2611 6804 9.577110 AACAATAACAATGATGATGTGATGAAC 57.423 29.630 0.00 0.00 0.00 3.18
2627 6820 9.988815 ACAATAACAAGGCAATAACAATAACAA 57.011 25.926 0.00 0.00 0.00 2.83
2628 6821 9.988815 AACAATAACAAGGCAATAACAATAACA 57.011 25.926 0.00 0.00 0.00 2.41
2648 6841 8.898761 GTGATGGATGGTGTAACAATAACAATA 58.101 33.333 0.00 0.00 39.98 1.90
2649 6842 7.395772 TGTGATGGATGGTGTAACAATAACAAT 59.604 33.333 0.00 0.00 39.98 2.71
2651 6844 6.241645 TGTGATGGATGGTGTAACAATAACA 58.758 36.000 0.00 0.00 39.98 2.41
2652 6845 6.751514 TGTGATGGATGGTGTAACAATAAC 57.248 37.500 0.00 0.00 39.98 1.89
2654 6847 5.650266 GGTTGTGATGGATGGTGTAACAATA 59.350 40.000 0.00 0.00 39.98 1.90
2655 6848 4.462483 GGTTGTGATGGATGGTGTAACAAT 59.538 41.667 0.00 0.00 39.98 2.71
2656 6849 3.823873 GGTTGTGATGGATGGTGTAACAA 59.176 43.478 0.00 0.00 39.98 2.83
2697 6890 5.508200 TGTTTTGGTTGCTACTAAGTTGG 57.492 39.130 0.00 0.00 0.00 3.77
2705 6898 5.407502 ACTCTTTGTTGTTTTGGTTGCTAC 58.592 37.500 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.