Multiple sequence alignment - TraesCS1A01G441800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G441800 chr1A 100.000 5620 0 0 1 5620 590546602 590552221 0.000000e+00 10379.0
1 TraesCS1A01G441800 chr1A 95.506 89 4 0 225 313 590006325 590006237 5.870000e-30 143.0
2 TraesCS1A01G441800 chr1A 93.878 49 3 0 2481 2529 569382952 569383000 2.170000e-09 75.0
3 TraesCS1A01G441800 chr1D 93.118 2688 146 7 2703 5370 492406920 492409588 0.000000e+00 3903.0
4 TraesCS1A01G441800 chr1D 91.839 772 29 21 1108 1870 492404564 492405310 0.000000e+00 1046.0
5 TraesCS1A01G441800 chr1D 84.225 729 61 29 509 1218 492404029 492404722 0.000000e+00 660.0
6 TraesCS1A01G441800 chr1D 96.319 326 7 1 5210 5530 492409549 492409874 1.070000e-146 531.0
7 TraesCS1A01G441800 chr1D 95.222 293 13 1 1910 2201 492405883 492406175 3.970000e-126 462.0
8 TraesCS1A01G441800 chr1D 85.459 447 18 14 85 494 492403543 492403979 6.730000e-114 422.0
9 TraesCS1A01G441800 chr1D 95.804 143 4 1 2514 2654 492406526 492406668 4.380000e-56 230.0
10 TraesCS1A01G441800 chr1D 94.595 148 7 1 2322 2469 492406311 492406457 1.580000e-55 228.0
11 TraesCS1A01G441800 chr1D 96.040 101 4 0 5520 5620 492410300 492410400 1.250000e-36 165.0
12 TraesCS1A01G441800 chr1D 100.000 34 0 0 2653 2686 492406838 492406871 4.700000e-06 63.9
13 TraesCS1A01G441800 chr1D 92.105 38 3 0 1756 1793 419986655 419986692 3.000000e-03 54.7
14 TraesCS1A01G441800 chr2A 86.158 419 48 4 1912 2322 650593482 650593066 1.440000e-120 444.0
15 TraesCS1A01G441800 chr2A 92.958 71 4 1 2465 2534 650592805 650592735 9.960000e-18 102.0
16 TraesCS1A01G441800 chr2A 91.837 49 4 0 2481 2529 758505548 758505500 1.010000e-07 69.4
17 TraesCS1A01G441800 chr4B 91.333 150 11 2 2321 2469 594264127 594263979 2.650000e-48 204.0
18 TraesCS1A01G441800 chr6B 90.909 88 8 0 2235 2322 655079012 655079099 9.890000e-23 119.0
19 TraesCS1A01G441800 chr6B 89.552 67 5 2 2465 2530 655079358 655079423 3.610000e-12 84.2
20 TraesCS1A01G441800 chr7A 90.476 84 5 2 1793 1873 275835847 275835930 2.140000e-19 108.0
21 TraesCS1A01G441800 chr7A 88.333 60 5 2 2475 2533 275836813 275836871 2.810000e-08 71.3
22 TraesCS1A01G441800 chr1B 88.750 80 6 2 1794 1870 503546799 503546878 1.670000e-15 95.3
23 TraesCS1A01G441800 chr1B 91.549 71 3 3 2465 2533 503575294 503575363 1.670000e-15 95.3
24 TraesCS1A01G441800 chr1B 92.308 39 3 0 1755 1793 566979614 566979652 7.870000e-04 56.5
25 TraesCS1A01G441800 chr5A 88.000 75 7 2 2465 2537 48185407 48185333 2.790000e-13 87.9
26 TraesCS1A01G441800 chr5A 87.838 74 8 1 2465 2537 673510165 673510092 1.000000e-12 86.1
27 TraesCS1A01G441800 chr2B 85.333 75 8 3 2465 2538 369779021 369779093 2.170000e-09 75.0
28 TraesCS1A01G441800 chr7D 82.895 76 7 3 5310 5379 566783800 566783725 4.700000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G441800 chr1A 590546602 590552221 5619 False 10379.00 10379 100.0000 1 5620 1 chr1A.!!$F2 5619
1 TraesCS1A01G441800 chr1D 492403543 492410400 6857 False 771.09 3903 93.2621 85 5620 10 chr1D.!!$F2 5535
2 TraesCS1A01G441800 chr2A 650592735 650593482 747 True 273.00 444 89.5580 1912 2534 2 chr2A.!!$R2 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
571 643 0.035915 GGCTCAAGAGGTGACCCTTC 60.036 60.0 0.0 0.0 42.86 3.46 F
2151 2800 0.183492 GCCATGCCCTGTCCTGATAA 59.817 55.0 0.0 0.0 0.00 1.75 F
2206 2855 0.107410 ACCTTGTTGAAGCCGTGTGA 60.107 50.0 0.0 0.0 0.00 3.58 F
2221 2870 0.246360 TGTGAGATGTGGTAGCCGTG 59.754 55.0 0.0 0.0 0.00 4.94 F
3122 4197 0.036952 AGAGGTGTTGGCTCGTGATG 60.037 55.0 0.0 0.0 0.00 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2202 2851 0.246360 CACGGCTACCACATCTCACA 59.754 55.000 0.00 0.0 0.00 3.58 R
3104 4179 0.037326 TCATCACGAGCCAACACCTC 60.037 55.000 0.00 0.0 0.00 3.85 R
3105 4180 0.320771 GTCATCACGAGCCAACACCT 60.321 55.000 0.00 0.0 0.00 4.00 R
3423 4498 1.180907 TCTGCATTGCGCCCAAATAA 58.819 45.000 4.18 0.0 41.33 1.40 R
5057 6150 1.008327 TGGATGGGGAGAGACTTAGCA 59.992 52.381 0.00 0.0 0.00 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.674068 AGTAAATCAAAGGTAGGATTCTCTTTC 57.326 33.333 0.00 0.00 32.81 2.62
27 28 7.617041 AAATCAAAGGTAGGATTCTCTTTCG 57.383 36.000 0.00 0.00 32.81 3.46
28 29 4.504858 TCAAAGGTAGGATTCTCTTTCGC 58.495 43.478 0.00 0.00 0.00 4.70
29 30 4.223032 TCAAAGGTAGGATTCTCTTTCGCT 59.777 41.667 0.00 0.00 0.00 4.93
30 31 4.828072 AAGGTAGGATTCTCTTTCGCTT 57.172 40.909 0.00 0.00 0.00 4.68
31 32 4.394439 AGGTAGGATTCTCTTTCGCTTC 57.606 45.455 0.00 0.00 0.00 3.86
32 33 4.027437 AGGTAGGATTCTCTTTCGCTTCT 58.973 43.478 0.00 0.00 0.00 2.85
33 34 4.468153 AGGTAGGATTCTCTTTCGCTTCTT 59.532 41.667 0.00 0.00 0.00 2.52
34 35 5.046231 AGGTAGGATTCTCTTTCGCTTCTTT 60.046 40.000 0.00 0.00 0.00 2.52
35 36 5.644206 GGTAGGATTCTCTTTCGCTTCTTTT 59.356 40.000 0.00 0.00 0.00 2.27
36 37 6.149640 GGTAGGATTCTCTTTCGCTTCTTTTT 59.850 38.462 0.00 0.00 0.00 1.94
65 66 7.895582 TTACTTACGAACGAAAACAAATTGG 57.104 32.000 0.14 0.00 0.00 3.16
66 67 5.882553 ACTTACGAACGAAAACAAATTGGT 58.117 33.333 0.14 0.00 0.00 3.67
67 68 5.740099 ACTTACGAACGAAAACAAATTGGTG 59.260 36.000 0.14 0.00 0.00 4.17
68 69 2.855370 ACGAACGAAAACAAATTGGTGC 59.145 40.909 0.14 0.00 0.00 5.01
69 70 2.217620 CGAACGAAAACAAATTGGTGCC 59.782 45.455 0.00 0.00 0.00 5.01
70 71 2.232756 ACGAAAACAAATTGGTGCCC 57.767 45.000 0.00 0.00 0.00 5.36
71 72 1.202592 ACGAAAACAAATTGGTGCCCC 60.203 47.619 0.00 0.00 0.00 5.80
72 73 1.202580 CGAAAACAAATTGGTGCCCCA 60.203 47.619 0.00 0.00 39.65 4.96
73 74 2.217750 GAAAACAAATTGGTGCCCCAC 58.782 47.619 0.00 0.00 41.67 4.61
128 133 5.105917 TGGCGGTGAATAAAAGGATTCTTTC 60.106 40.000 0.00 0.00 41.92 2.62
177 182 0.249489 CCCTAATTACGCGCAGAGCT 60.249 55.000 5.73 0.00 45.59 4.09
187 192 1.662438 GCGCAGAGCTAGTCAGGACT 61.662 60.000 0.30 7.18 44.04 3.85
277 296 1.573376 AGAGTGAGGGCTCCTACTGAT 59.427 52.381 0.00 0.00 36.20 2.90
278 297 2.023501 AGAGTGAGGGCTCCTACTGATT 60.024 50.000 0.00 0.00 36.20 2.57
279 298 2.364002 GAGTGAGGGCTCCTACTGATTC 59.636 54.545 0.00 0.00 31.76 2.52
280 299 2.111384 GTGAGGGCTCCTACTGATTCA 58.889 52.381 0.00 0.00 31.76 2.57
281 300 2.102252 GTGAGGGCTCCTACTGATTCAG 59.898 54.545 12.17 12.17 31.76 3.02
282 301 1.069978 GAGGGCTCCTACTGATTCAGC 59.930 57.143 13.64 0.00 31.42 4.26
283 302 1.127343 GGGCTCCTACTGATTCAGCT 58.873 55.000 13.64 4.11 34.37 4.24
284 303 1.202627 GGGCTCCTACTGATTCAGCTG 60.203 57.143 13.64 7.63 34.37 4.24
285 304 1.759445 GGCTCCTACTGATTCAGCTGA 59.241 52.381 13.74 13.74 34.37 4.26
286 305 2.169352 GGCTCCTACTGATTCAGCTGAA 59.831 50.000 30.23 30.23 38.56 3.02
287 306 3.181456 GGCTCCTACTGATTCAGCTGAAT 60.181 47.826 36.15 36.15 46.54 2.57
288 307 3.808726 GCTCCTACTGATTCAGCTGAATG 59.191 47.826 39.54 29.02 44.14 2.67
289 308 3.801698 TCCTACTGATTCAGCTGAATGC 58.198 45.455 39.54 29.41 44.14 3.56
290 309 2.877168 CCTACTGATTCAGCTGAATGCC 59.123 50.000 39.54 27.70 44.14 4.40
291 310 2.803030 ACTGATTCAGCTGAATGCCT 57.197 45.000 39.54 21.81 44.14 4.75
293 312 1.676529 CTGATTCAGCTGAATGCCTGG 59.323 52.381 39.54 21.97 44.14 4.45
294 313 0.384669 GATTCAGCTGAATGCCTGGC 59.615 55.000 39.54 23.18 44.14 4.85
295 314 1.041447 ATTCAGCTGAATGCCTGGCC 61.041 55.000 35.32 0.00 42.66 5.36
296 315 3.515286 CAGCTGAATGCCTGGCCG 61.515 66.667 17.53 0.49 44.23 6.13
297 316 4.039092 AGCTGAATGCCTGGCCGT 62.039 61.111 17.53 3.12 44.23 5.68
298 317 2.124736 GCTGAATGCCTGGCCGTA 60.125 61.111 17.53 0.00 35.15 4.02
307 339 4.737855 ATGCCTGGCCGTACTATATAAG 57.262 45.455 17.53 0.00 0.00 1.73
393 425 1.154654 CCGAGCTCGCGAAAACAAC 60.155 57.895 30.49 0.95 38.18 3.32
442 474 3.386237 GGCGTCTGCAGGACCTCT 61.386 66.667 15.13 0.00 45.35 3.69
447 479 1.336440 CGTCTGCAGGACCTCTATCTG 59.664 57.143 15.13 0.00 41.64 2.90
450 482 1.365633 GCAGGACCTCTATCTGCCG 59.634 63.158 0.00 0.00 45.67 5.69
452 484 1.834822 AGGACCTCTATCTGCCGGC 60.835 63.158 22.73 22.73 0.00 6.13
453 485 1.834822 GGACCTCTATCTGCCGGCT 60.835 63.158 29.70 10.43 0.00 5.52
454 486 1.403687 GGACCTCTATCTGCCGGCTT 61.404 60.000 29.70 15.01 0.00 4.35
455 487 0.249657 GACCTCTATCTGCCGGCTTG 60.250 60.000 29.70 20.24 0.00 4.01
456 488 1.070445 CCTCTATCTGCCGGCTTGG 59.930 63.158 29.70 17.48 42.50 3.61
484 521 4.101448 ACCATGGTGAGGCGAGGC 62.101 66.667 18.99 0.00 0.00 4.70
499 536 4.459089 GGCGAGGCGAGGCTCTTT 62.459 66.667 21.53 0.00 0.00 2.52
500 537 2.435059 GCGAGGCGAGGCTCTTTT 60.435 61.111 21.53 0.00 0.00 2.27
501 538 2.035442 GCGAGGCGAGGCTCTTTTT 61.035 57.895 21.53 0.00 0.00 1.94
503 540 0.951040 CGAGGCGAGGCTCTTTTTGT 60.951 55.000 21.53 0.00 0.00 2.83
504 541 1.671850 CGAGGCGAGGCTCTTTTTGTA 60.672 52.381 21.53 0.00 0.00 2.41
507 544 2.027192 AGGCGAGGCTCTTTTTGTATCA 60.027 45.455 13.50 0.00 0.00 2.15
509 546 3.002759 GGCGAGGCTCTTTTTGTATCATC 59.997 47.826 13.50 0.00 0.00 2.92
510 547 3.002759 GCGAGGCTCTTTTTGTATCATCC 59.997 47.826 13.50 0.00 0.00 3.51
532 604 3.826157 CTGGGGACTAACTGAATTTTGCA 59.174 43.478 0.00 0.00 0.00 4.08
544 616 7.223260 ACTGAATTTTGCATCTTCAGATTGA 57.777 32.000 26.98 0.60 45.57 2.57
562 634 0.750911 GATTGGCCTGGCTCAAGAGG 60.751 60.000 19.68 0.00 0.00 3.69
569 641 1.152030 TGGCTCAAGAGGTGACCCT 60.152 57.895 0.00 0.00 46.66 4.34
570 642 0.768221 TGGCTCAAGAGGTGACCCTT 60.768 55.000 0.00 0.00 42.86 3.95
571 643 0.035915 GGCTCAAGAGGTGACCCTTC 60.036 60.000 0.00 0.00 42.86 3.46
572 644 0.035915 GCTCAAGAGGTGACCCTTCC 60.036 60.000 0.00 0.00 42.86 3.46
587 659 2.295885 CCTTCCATCCATCTTGCTGTC 58.704 52.381 0.00 0.00 0.00 3.51
592 664 2.205074 CATCCATCTTGCTGTCGGTAC 58.795 52.381 0.00 0.00 0.00 3.34
622 694 1.202533 GGGAAGGCTCGAATCGATTCA 60.203 52.381 31.57 19.84 36.61 2.57
623 695 2.550978 GGAAGGCTCGAATCGATTCAA 58.449 47.619 31.57 17.65 36.61 2.69
624 696 2.936498 GGAAGGCTCGAATCGATTCAAA 59.064 45.455 31.57 20.30 36.61 2.69
625 697 3.374058 GGAAGGCTCGAATCGATTCAAAA 59.626 43.478 31.57 18.17 36.61 2.44
629 701 5.954335 AGGCTCGAATCGATTCAAAATTTT 58.046 33.333 31.57 12.22 36.61 1.82
631 703 6.308766 AGGCTCGAATCGATTCAAAATTTTTG 59.691 34.615 31.57 14.41 36.61 2.44
632 704 6.089417 GGCTCGAATCGATTCAAAATTTTTGT 59.911 34.615 31.57 3.65 36.61 2.83
633 705 7.359181 GGCTCGAATCGATTCAAAATTTTTGTT 60.359 33.333 31.57 9.82 36.61 2.83
634 706 7.472186 GCTCGAATCGATTCAAAATTTTTGTTG 59.528 33.333 31.57 14.48 36.61 3.33
635 707 7.782242 TCGAATCGATTCAAAATTTTTGTTGG 58.218 30.769 31.57 14.11 36.61 3.77
637 709 7.526850 CGAATCGATTCAAAATTTTTGTTGGTG 59.473 33.333 31.57 10.25 36.61 4.17
638 710 7.784633 ATCGATTCAAAATTTTTGTTGGTGT 57.215 28.000 18.69 3.69 0.00 4.16
639 711 7.602517 TCGATTCAAAATTTTTGTTGGTGTT 57.397 28.000 18.69 1.44 0.00 3.32
640 712 8.034058 TCGATTCAAAATTTTTGTTGGTGTTT 57.966 26.923 18.69 0.60 0.00 2.83
641 713 9.151471 TCGATTCAAAATTTTTGTTGGTGTTTA 57.849 25.926 18.69 0.00 0.00 2.01
642 714 9.204792 CGATTCAAAATTTTTGTTGGTGTTTAC 57.795 29.630 18.69 3.37 0.00 2.01
645 717 9.884465 TTCAAAATTTTTGTTGGTGTTTACTTG 57.116 25.926 18.69 0.00 0.00 3.16
646 718 9.273016 TCAAAATTTTTGTTGGTGTTTACTTGA 57.727 25.926 18.69 0.00 0.00 3.02
649 721 8.785329 AATTTTTGTTGGTGTTTACTTGATGT 57.215 26.923 0.00 0.00 0.00 3.06
650 722 9.877178 AATTTTTGTTGGTGTTTACTTGATGTA 57.123 25.926 0.00 0.00 0.00 2.29
654 726 8.864069 TTGTTGGTGTTTACTTGATGTATTTG 57.136 30.769 0.00 0.00 0.00 2.32
662 734 9.685276 TGTTTACTTGATGTATTTGGATCTGAT 57.315 29.630 0.00 0.00 0.00 2.90
670 742 5.748402 TGTATTTGGATCTGATGAGTGCTT 58.252 37.500 0.00 0.00 0.00 3.91
686 770 1.202879 TGCTTGTTCGTTCCCCATCTT 60.203 47.619 0.00 0.00 0.00 2.40
691 775 4.137116 TGTTCGTTCCCCATCTTATCTG 57.863 45.455 0.00 0.00 0.00 2.90
692 776 3.772572 TGTTCGTTCCCCATCTTATCTGA 59.227 43.478 0.00 0.00 0.00 3.27
693 777 4.224147 TGTTCGTTCCCCATCTTATCTGAA 59.776 41.667 0.00 0.00 0.00 3.02
696 780 5.611374 TCGTTCCCCATCTTATCTGAATTC 58.389 41.667 0.00 0.00 0.00 2.17
698 782 6.058183 CGTTCCCCATCTTATCTGAATTCTT 58.942 40.000 7.05 0.00 0.00 2.52
729 813 9.973661 TTTTTGAAGGTATCCTATCTGAATTCA 57.026 29.630 8.12 8.12 31.13 2.57
730 814 9.618890 TTTTGAAGGTATCCTATCTGAATTCAG 57.381 33.333 26.56 26.56 38.11 3.02
731 815 8.553085 TTGAAGGTATCCTATCTGAATTCAGA 57.447 34.615 34.14 34.14 44.77 3.27
732 816 7.957002 TGAAGGTATCCTATCTGAATTCAGAC 58.043 38.462 34.61 22.04 44.01 3.51
733 817 7.565029 TGAAGGTATCCTATCTGAATTCAGACA 59.435 37.037 34.61 25.47 44.01 3.41
734 818 7.731054 AAGGTATCCTATCTGAATTCAGACAC 58.269 38.462 34.61 23.65 44.01 3.67
742 826 3.049912 CTGAATTCAGACACACGACGAA 58.950 45.455 28.13 0.00 46.59 3.85
743 827 3.649073 TGAATTCAGACACACGACGAAT 58.351 40.909 3.38 0.00 0.00 3.34
760 844 0.517755 AATCGTCGGAGATCGGATCG 59.482 55.000 12.08 2.00 40.67 3.69
762 846 1.082692 CGTCGGAGATCGGATCGTG 60.083 63.158 12.08 6.59 40.67 4.35
763 847 1.496403 CGTCGGAGATCGGATCGTGA 61.496 60.000 12.08 8.65 40.67 4.35
821 912 4.473520 CCCGTTGGAGGCGCTGAT 62.474 66.667 7.64 0.00 0.00 2.90
822 913 3.197790 CCGTTGGAGGCGCTGATG 61.198 66.667 7.64 0.00 0.00 3.07
823 914 3.869272 CGTTGGAGGCGCTGATGC 61.869 66.667 7.64 0.00 0.00 3.91
846 937 1.766864 TCCAACTGGACCGACCCAA 60.767 57.895 0.00 0.00 39.78 4.12
847 938 1.302511 CCAACTGGACCGACCCAAG 60.303 63.158 0.00 0.00 35.47 3.61
848 939 1.302511 CAACTGGACCGACCCAAGG 60.303 63.158 0.00 0.00 35.47 3.61
849 940 3.192103 AACTGGACCGACCCAAGGC 62.192 63.158 0.00 0.00 35.47 4.35
850 941 4.760047 CTGGACCGACCCAAGGCG 62.760 72.222 0.00 0.00 35.47 5.52
917 1020 2.258591 GCTCAGAGTCGCAACCGA 59.741 61.111 0.00 0.00 42.01 4.69
970 1073 2.939103 CTCTCCATTGCTAGGGTTTTCG 59.061 50.000 0.00 0.00 0.00 3.46
999 1102 1.609072 CATCGCGAATCCTACCTCTCA 59.391 52.381 15.24 0.00 0.00 3.27
1207 1310 3.087253 CCCATGCCCGAGGGTACA 61.087 66.667 10.26 0.29 40.34 2.90
1208 1311 2.189521 CCATGCCCGAGGGTACAC 59.810 66.667 10.26 0.00 37.65 2.90
1209 1312 2.189521 CATGCCCGAGGGTACACC 59.810 66.667 10.26 0.00 37.65 4.16
1210 1313 2.285069 ATGCCCGAGGGTACACCA 60.285 61.111 10.26 0.00 43.89 4.17
1211 1314 2.367202 ATGCCCGAGGGTACACCAG 61.367 63.158 10.26 0.00 43.89 4.00
1212 1315 4.468689 GCCCGAGGGTACACCAGC 62.469 72.222 10.26 0.00 43.89 4.85
1213 1316 4.143333 CCCGAGGGTACACCAGCG 62.143 72.222 0.00 3.20 43.89 5.18
1214 1317 3.066190 CCGAGGGTACACCAGCGA 61.066 66.667 12.05 0.00 43.89 4.93
1215 1318 2.490217 CGAGGGTACACCAGCGAG 59.510 66.667 0.00 0.00 43.89 5.03
1216 1319 2.893398 GAGGGTACACCAGCGAGG 59.107 66.667 0.00 0.00 43.89 4.63
1217 1320 2.683933 AGGGTACACCAGCGAGGG 60.684 66.667 0.00 0.00 43.89 4.30
1218 1321 4.468689 GGGTACACCAGCGAGGGC 62.469 72.222 0.00 0.00 43.89 5.19
1219 1322 4.814294 GGTACACCAGCGAGGGCG 62.814 72.222 0.00 0.00 46.35 6.13
1220 1323 4.814294 GTACACCAGCGAGGGCGG 62.814 72.222 3.26 0.00 46.35 6.13
1283 1386 1.227380 CCGGCGAGGGATTCTCTTG 60.227 63.158 9.30 0.00 40.30 3.02
1311 1414 3.562973 GGTACTCGATATCTCCACGTTCA 59.437 47.826 0.34 0.00 0.00 3.18
1326 1429 3.021355 CGTTCACGTCGATTTGATTCC 57.979 47.619 0.00 0.00 34.11 3.01
1327 1430 2.410392 CGTTCACGTCGATTTGATTCCA 59.590 45.455 0.00 0.00 34.11 3.53
1328 1431 3.481951 CGTTCACGTCGATTTGATTCCAG 60.482 47.826 0.00 0.00 34.11 3.86
1329 1432 3.586100 TCACGTCGATTTGATTCCAGA 57.414 42.857 0.00 0.00 0.00 3.86
1335 1438 3.249559 GTCGATTTGATTCCAGATCCTGC 59.750 47.826 0.00 0.00 32.09 4.85
1350 1453 2.398588 TCCTGCTTTCCCGATCTGTAT 58.601 47.619 0.00 0.00 0.00 2.29
1377 1482 2.083774 GAACTGATCCCGAAATGTGCA 58.916 47.619 0.00 0.00 0.00 4.57
1410 1515 4.785453 GGAAGCACCAGGCCCGAG 62.785 72.222 0.00 0.00 46.50 4.63
1515 1620 0.591170 CCAACGCCAACTCAAATCGT 59.409 50.000 0.00 0.00 34.63 3.73
1571 1677 3.653835 AAAAGTCTTATCTCCCCCAGC 57.346 47.619 0.00 0.00 0.00 4.85
1607 1714 1.325355 TCTTCTCGTGACCCGACTTT 58.675 50.000 0.00 0.00 41.60 2.66
1620 1727 5.079689 ACCCGACTTTGTTGAAAAATTGT 57.920 34.783 0.00 0.00 0.00 2.71
1691 1798 5.786311 ACATGGTCACTTTGATCAAAATGG 58.214 37.500 24.81 15.00 41.38 3.16
1708 1815 7.765307 TCAAAATGGATTAATCTTCTCTGCAC 58.235 34.615 14.95 0.00 0.00 4.57
1712 1819 6.798427 TGGATTAATCTTCTCTGCACTACT 57.202 37.500 14.95 0.00 0.00 2.57
1715 1822 7.561722 TGGATTAATCTTCTCTGCACTACTACT 59.438 37.037 14.95 0.00 0.00 2.57
1733 1840 9.007901 ACTACTACTACTTCGTAATGTCACTTT 57.992 33.333 0.00 0.00 0.00 2.66
1736 1843 8.355169 ACTACTACTTCGTAATGTCACTTTTCA 58.645 33.333 0.00 0.00 0.00 2.69
1836 1943 6.183360 ACACTGCGTTAAAATTTTGTTCCCTA 60.183 34.615 13.76 0.00 0.00 3.53
1881 2376 5.104151 TCCTTATGTAACATCATTGAGGCCA 60.104 40.000 5.01 0.00 33.71 5.36
1888 2383 1.960689 CATCATTGAGGCCATGCATGA 59.039 47.619 28.31 7.14 0.00 3.07
1889 2384 2.375014 TCATTGAGGCCATGCATGAT 57.625 45.000 28.31 13.17 0.00 2.45
1890 2385 2.235891 TCATTGAGGCCATGCATGATC 58.764 47.619 28.31 20.72 0.00 2.92
1891 2386 1.272490 CATTGAGGCCATGCATGATCC 59.728 52.381 28.31 24.95 0.00 3.36
1893 2388 0.554305 TGAGGCCATGCATGATCCTT 59.446 50.000 29.06 18.64 33.07 3.36
1897 2392 3.830755 GAGGCCATGCATGATCCTTATTT 59.169 43.478 29.06 15.16 33.07 1.40
1898 2393 4.228824 AGGCCATGCATGATCCTTATTTT 58.771 39.130 28.31 8.46 30.18 1.82
1899 2394 4.657039 AGGCCATGCATGATCCTTATTTTT 59.343 37.500 28.31 7.81 30.18 1.94
1901 2396 5.221581 GGCCATGCATGATCCTTATTTTTCT 60.222 40.000 28.31 0.00 0.00 2.52
1903 2398 6.423001 GCCATGCATGATCCTTATTTTTCTTC 59.577 38.462 28.31 0.00 0.00 2.87
1904 2399 7.494211 CCATGCATGATCCTTATTTTTCTTCA 58.506 34.615 28.31 0.00 0.00 3.02
1905 2400 8.148351 CCATGCATGATCCTTATTTTTCTTCAT 58.852 33.333 28.31 0.00 0.00 2.57
1906 2401 8.978539 CATGCATGATCCTTATTTTTCTTCATG 58.021 33.333 22.59 0.00 41.03 3.07
1907 2402 8.296211 TGCATGATCCTTATTTTTCTTCATGA 57.704 30.769 12.71 0.00 40.73 3.07
1909 2404 9.590451 GCATGATCCTTATTTTTCTTCATGAAA 57.410 29.630 9.88 0.00 40.73 2.69
1961 2602 8.635765 TTCAGCAAATAACTTAGTTTGGATCT 57.364 30.769 1.94 0.00 36.19 2.75
2015 2656 3.499918 AGCTAGACAAAGTTGTGCATGAC 59.500 43.478 0.42 0.00 42.43 3.06
2100 2749 1.807142 GTGTGAGCCTTAACCTTCAGC 59.193 52.381 0.00 0.00 0.00 4.26
2130 2779 1.306482 TAGCTGAGGCCAAGGAGCT 60.306 57.895 18.33 18.33 44.05 4.09
2151 2800 0.183492 GCCATGCCCTGTCCTGATAA 59.817 55.000 0.00 0.00 0.00 1.75
2186 2835 1.447643 GCCGAGTATCCAGCCACAT 59.552 57.895 0.00 0.00 0.00 3.21
2196 2845 1.702401 TCCAGCCACATACCTTGTTGA 59.298 47.619 0.00 0.00 36.00 3.18
2197 2846 2.107378 TCCAGCCACATACCTTGTTGAA 59.893 45.455 0.00 0.00 36.00 2.69
2198 2847 2.489329 CCAGCCACATACCTTGTTGAAG 59.511 50.000 0.00 0.00 36.00 3.02
2199 2848 2.095059 CAGCCACATACCTTGTTGAAGC 60.095 50.000 0.00 0.00 36.00 3.86
2200 2849 1.202348 GCCACATACCTTGTTGAAGCC 59.798 52.381 0.00 0.00 36.00 4.35
2201 2850 1.468520 CCACATACCTTGTTGAAGCCG 59.531 52.381 0.00 0.00 36.00 5.52
2202 2851 2.151202 CACATACCTTGTTGAAGCCGT 58.849 47.619 0.00 0.00 36.00 5.68
2203 2852 2.095768 CACATACCTTGTTGAAGCCGTG 60.096 50.000 0.00 0.00 36.00 4.94
2204 2853 2.151202 CATACCTTGTTGAAGCCGTGT 58.849 47.619 0.00 0.00 0.00 4.49
2205 2854 1.588674 TACCTTGTTGAAGCCGTGTG 58.411 50.000 0.00 0.00 0.00 3.82
2206 2855 0.107410 ACCTTGTTGAAGCCGTGTGA 60.107 50.000 0.00 0.00 0.00 3.58
2207 2856 0.588252 CCTTGTTGAAGCCGTGTGAG 59.412 55.000 0.00 0.00 0.00 3.51
2208 2857 1.581934 CTTGTTGAAGCCGTGTGAGA 58.418 50.000 0.00 0.00 0.00 3.27
2209 2858 2.146342 CTTGTTGAAGCCGTGTGAGAT 58.854 47.619 0.00 0.00 0.00 2.75
2210 2859 1.511850 TGTTGAAGCCGTGTGAGATG 58.488 50.000 0.00 0.00 0.00 2.90
2211 2860 1.202639 TGTTGAAGCCGTGTGAGATGT 60.203 47.619 0.00 0.00 0.00 3.06
2212 2861 1.195448 GTTGAAGCCGTGTGAGATGTG 59.805 52.381 0.00 0.00 0.00 3.21
2213 2862 0.320683 TGAAGCCGTGTGAGATGTGG 60.321 55.000 0.00 0.00 0.00 4.17
2214 2863 0.320771 GAAGCCGTGTGAGATGTGGT 60.321 55.000 0.00 0.00 0.00 4.16
2215 2864 0.973632 AAGCCGTGTGAGATGTGGTA 59.026 50.000 0.00 0.00 0.00 3.25
2216 2865 0.532573 AGCCGTGTGAGATGTGGTAG 59.467 55.000 0.00 0.00 0.00 3.18
2217 2866 1.084370 GCCGTGTGAGATGTGGTAGC 61.084 60.000 0.00 0.00 0.00 3.58
2218 2867 0.460284 CCGTGTGAGATGTGGTAGCC 60.460 60.000 0.00 0.00 0.00 3.93
2219 2868 0.802222 CGTGTGAGATGTGGTAGCCG 60.802 60.000 0.00 0.00 0.00 5.52
2220 2869 0.246635 GTGTGAGATGTGGTAGCCGT 59.753 55.000 0.00 0.00 0.00 5.68
2221 2870 0.246360 TGTGAGATGTGGTAGCCGTG 59.754 55.000 0.00 0.00 0.00 4.94
2222 2871 1.084370 GTGAGATGTGGTAGCCGTGC 61.084 60.000 0.00 0.00 0.00 5.34
2223 2872 1.521681 GAGATGTGGTAGCCGTGCC 60.522 63.158 0.00 0.00 0.00 5.01
2224 2873 2.513897 GATGTGGTAGCCGTGCCC 60.514 66.667 0.00 0.00 0.00 5.36
2225 2874 3.009115 ATGTGGTAGCCGTGCCCT 61.009 61.111 0.00 0.00 0.00 5.19
2226 2875 2.925162 GATGTGGTAGCCGTGCCCTC 62.925 65.000 0.00 0.00 0.00 4.30
2227 2876 4.814294 GTGGTAGCCGTGCCCTCG 62.814 72.222 0.00 0.00 0.00 4.63
2229 2878 4.509737 GGTAGCCGTGCCCTCGTC 62.510 72.222 0.00 0.00 0.00 4.20
2230 2879 4.509737 GTAGCCGTGCCCTCGTCC 62.510 72.222 0.00 0.00 0.00 4.79
2253 2947 2.348888 CCTCCGTAGCCAGACCGTT 61.349 63.158 0.00 0.00 0.00 4.44
2256 2950 2.813908 CGTAGCCAGACCGTTGCC 60.814 66.667 0.00 0.00 0.00 4.52
2263 2957 3.231736 AGACCGTTGCCGTCCACT 61.232 61.111 0.00 0.00 0.00 4.00
2269 2963 1.965930 GTTGCCGTCCACTGCATCA 60.966 57.895 0.00 0.00 36.04 3.07
2309 3003 4.335647 CTGCAGCCCCTTCACGGT 62.336 66.667 0.00 0.00 0.00 4.83
2351 3168 0.673956 GAAGAAAGACAGGGACGGGC 60.674 60.000 0.00 0.00 0.00 6.13
2585 3457 9.809096 TGCTGTATATTATATTCTTGAGCTAGC 57.191 33.333 6.62 6.62 0.00 3.42
2743 3818 5.357878 CAGGGCTGAGCTGTATCAATTTAAA 59.642 40.000 3.72 0.00 0.00 1.52
2746 3821 6.753744 GGGCTGAGCTGTATCAATTTAAAAAG 59.246 38.462 3.72 0.00 0.00 2.27
2773 3848 3.831323 TGATGACCTTTTGAAAGAGGCA 58.169 40.909 5.09 4.42 38.28 4.75
2780 3855 3.387397 CTTTTGAAAGAGGCAAGGCTTG 58.613 45.455 22.75 22.75 38.28 4.01
2781 3856 2.363306 TTGAAAGAGGCAAGGCTTGA 57.637 45.000 30.45 4.07 0.00 3.02
2791 3866 1.268079 GCAAGGCTTGAGTTGAAGACC 59.732 52.381 30.45 4.96 30.32 3.85
2796 3871 1.528129 CTTGAGTTGAAGACCCCTGC 58.472 55.000 0.00 0.00 0.00 4.85
2800 3875 0.689623 AGTTGAAGACCCCTGCTGAG 59.310 55.000 0.00 0.00 0.00 3.35
2806 3881 1.366319 AGACCCCTGCTGAGTTTGAT 58.634 50.000 0.00 0.00 0.00 2.57
2808 3883 2.503356 AGACCCCTGCTGAGTTTGATAG 59.497 50.000 0.00 0.00 0.00 2.08
2825 3900 9.314321 AGTTTGATAGTAATATTTCTGTGACCG 57.686 33.333 4.95 0.00 0.00 4.79
2852 3927 4.085876 CCTGGCAGGGTGTTCTTG 57.914 61.111 26.34 0.00 0.00 3.02
2854 3929 0.400213 CCTGGCAGGGTGTTCTTGTA 59.600 55.000 26.34 0.00 0.00 2.41
2857 3932 2.955660 CTGGCAGGGTGTTCTTGTAAAA 59.044 45.455 6.61 0.00 0.00 1.52
2883 3958 2.033407 CGATTGCCTTTGCGTCTATGAG 60.033 50.000 0.00 0.00 41.78 2.90
2893 3968 1.359475 GTCTATGAGACGACCGGGC 59.641 63.158 6.32 0.00 35.28 6.13
2921 3996 0.827507 AATGCGGTGGAAACTTGGCT 60.828 50.000 0.00 0.00 0.00 4.75
2938 4013 1.610522 GGCTTCACTGCTGTTGATGTT 59.389 47.619 0.00 0.00 0.00 2.71
2939 4014 2.035066 GGCTTCACTGCTGTTGATGTTT 59.965 45.455 0.00 0.00 0.00 2.83
2940 4015 3.253188 GGCTTCACTGCTGTTGATGTTTA 59.747 43.478 0.00 0.00 0.00 2.01
2941 4016 4.082571 GGCTTCACTGCTGTTGATGTTTAT 60.083 41.667 0.00 0.00 0.00 1.40
2947 4022 7.056006 TCACTGCTGTTGATGTTTATATGGAT 58.944 34.615 0.00 0.00 0.00 3.41
2997 4072 9.754382 TGTTAGATTACTTAACGAGTTCACTTT 57.246 29.630 0.00 0.00 39.86 2.66
3007 4082 9.746711 CTTAACGAGTTCACTTTCAATATGAAG 57.253 33.333 0.00 0.00 37.70 3.02
3008 4083 7.730364 AACGAGTTCACTTTCAATATGAAGT 57.270 32.000 0.00 0.00 37.70 3.01
3011 4086 7.116948 ACGAGTTCACTTTCAATATGAAGTCTG 59.883 37.037 15.39 12.12 44.94 3.51
3013 4088 9.424319 GAGTTCACTTTCAATATGAAGTCTGTA 57.576 33.333 11.87 0.00 44.25 2.74
3019 4094 9.429359 ACTTTCAATATGAAGTCTGTAGTTGAG 57.571 33.333 0.00 0.00 37.70 3.02
3020 4095 9.429359 CTTTCAATATGAAGTCTGTAGTTGAGT 57.571 33.333 0.00 0.00 37.70 3.41
3031 4106 4.333095 TCTGTAGTTGAGTATGCTCGAGAC 59.667 45.833 18.75 5.52 44.48 3.36
3032 4107 3.377485 TGTAGTTGAGTATGCTCGAGACC 59.623 47.826 18.75 0.00 44.48 3.85
3034 4109 2.164624 AGTTGAGTATGCTCGAGACCAC 59.835 50.000 18.75 9.55 44.48 4.16
3035 4110 1.834188 TGAGTATGCTCGAGACCACA 58.166 50.000 18.75 4.56 44.48 4.17
3043 4118 4.200838 TGCTCGAGACCACAATGAAATA 57.799 40.909 18.75 0.00 0.00 1.40
3044 4119 4.574892 TGCTCGAGACCACAATGAAATAA 58.425 39.130 18.75 0.00 0.00 1.40
3048 4123 5.789521 TCGAGACCACAATGAAATAACTGA 58.210 37.500 0.00 0.00 0.00 3.41
3054 4129 8.464404 AGACCACAATGAAATAACTGATGAATG 58.536 33.333 0.00 0.00 0.00 2.67
3055 4130 8.125978 ACCACAATGAAATAACTGATGAATGT 57.874 30.769 0.00 0.00 0.00 2.71
3059 4134 7.758076 ACAATGAAATAACTGATGAATGTGCTG 59.242 33.333 0.00 0.00 0.00 4.41
3060 4135 6.822667 TGAAATAACTGATGAATGTGCTGT 57.177 33.333 0.00 0.00 0.00 4.40
3062 4137 7.085746 TGAAATAACTGATGAATGTGCTGTTG 58.914 34.615 0.00 0.00 0.00 3.33
3075 4150 2.982470 GTGCTGTTGAGTTGCTAAATGC 59.018 45.455 0.00 0.00 43.25 3.56
3088 4163 2.223135 GCTAAATGCGCTGAGGAAGTTC 60.223 50.000 9.73 0.00 0.00 3.01
3104 4179 5.043248 GGAAGTTCCACACAAATGTTTCAG 58.957 41.667 17.44 0.00 36.72 3.02
3105 4180 5.163561 GGAAGTTCCACACAAATGTTTCAGA 60.164 40.000 17.44 0.00 36.72 3.27
3122 4197 0.036952 AGAGGTGTTGGCTCGTGATG 60.037 55.000 0.00 0.00 0.00 3.07
3123 4198 0.037326 GAGGTGTTGGCTCGTGATGA 60.037 55.000 0.00 0.00 0.00 2.92
3127 4202 0.392706 TGTTGGCTCGTGATGACAGT 59.607 50.000 0.00 0.00 0.00 3.55
3156 4231 0.097674 GAGGCAATGCAACAGCTACG 59.902 55.000 7.79 0.00 0.00 3.51
3166 4241 3.066064 TGCAACAGCTACGTGAAAATGTT 59.934 39.130 0.00 0.00 0.00 2.71
3177 4252 4.275936 ACGTGAAAATGTTTCCTCTCTTGG 59.724 41.667 0.00 0.00 0.00 3.61
3187 4262 5.221925 TGTTTCCTCTCTTGGTGATAAGCTT 60.222 40.000 3.48 3.48 0.00 3.74
3204 4279 3.917988 AGCTTTTATCTTTTGGCAGTGC 58.082 40.909 6.55 6.55 0.00 4.40
3205 4280 3.321682 AGCTTTTATCTTTTGGCAGTGCA 59.678 39.130 18.61 0.00 0.00 4.57
3240 4315 7.868906 TTAATAGCTTTGCCGGTAATTTACT 57.131 32.000 5.59 4.11 0.00 2.24
3245 4320 4.439153 GCTTTGCCGGTAATTTACTAACCC 60.439 45.833 5.59 0.00 0.00 4.11
3336 4411 3.609807 CAGATGTGGCATATCGTGTATCG 59.390 47.826 17.04 0.17 41.41 2.92
3366 4441 1.408969 GTGACCCTGCCCTTTTTGAA 58.591 50.000 0.00 0.00 0.00 2.69
3372 4447 4.687976 ACCCTGCCCTTTTTGAAGATATT 58.312 39.130 0.00 0.00 0.00 1.28
3417 4492 4.036380 ACAAGAGACCCGTTTTTGCTAAAG 59.964 41.667 0.00 0.00 0.00 1.85
3419 4494 4.457466 AGAGACCCGTTTTTGCTAAAGAA 58.543 39.130 0.00 0.00 0.00 2.52
3423 4498 5.068591 AGACCCGTTTTTGCTAAAGAATGTT 59.931 36.000 0.00 0.00 0.00 2.71
3432 4507 7.665561 TTTGCTAAAGAATGTTTATTTGGGC 57.334 32.000 0.00 0.00 0.00 5.36
3483 4558 8.472683 TTTTACATGTGTTCTTGTCCTTTTTG 57.527 30.769 9.11 0.00 34.54 2.44
3492 4567 4.605183 TCTTGTCCTTTTTGTCCTTTCCA 58.395 39.130 0.00 0.00 0.00 3.53
3523 4598 4.342359 ACTATCGTGTCCTTGGTCTAACT 58.658 43.478 0.00 0.00 0.00 2.24
3575 4650 5.350504 TTTGGCTCTGAAATTGTTGGAAA 57.649 34.783 0.00 0.00 0.00 3.13
3591 4666 3.480470 TGGAAAGAACCTGCTCAAGAAG 58.520 45.455 0.00 0.00 0.00 2.85
3592 4667 3.117888 TGGAAAGAACCTGCTCAAGAAGT 60.118 43.478 0.00 0.00 0.00 3.01
3594 4669 5.063880 GGAAAGAACCTGCTCAAGAAGTTA 58.936 41.667 0.00 0.00 0.00 2.24
3595 4670 5.049336 GGAAAGAACCTGCTCAAGAAGTTAC 60.049 44.000 0.00 0.00 0.00 2.50
3596 4671 4.689612 AGAACCTGCTCAAGAAGTTACA 57.310 40.909 0.00 0.00 0.00 2.41
3597 4672 4.381411 AGAACCTGCTCAAGAAGTTACAC 58.619 43.478 0.00 0.00 0.00 2.90
3598 4673 3.127425 ACCTGCTCAAGAAGTTACACC 57.873 47.619 0.00 0.00 0.00 4.16
3670 4745 1.376942 CCTGGTCAGGCTGCTGAAG 60.377 63.158 10.34 4.58 42.44 3.02
3752 4827 8.723942 AAATTATGTACTCAGTCATTGACCTC 57.276 34.615 13.14 0.00 32.18 3.85
3753 4828 7.667575 ATTATGTACTCAGTCATTGACCTCT 57.332 36.000 13.14 0.00 32.18 3.69
3754 4829 7.482169 TTATGTACTCAGTCATTGACCTCTT 57.518 36.000 13.14 0.00 32.18 2.85
3755 4830 5.808366 TGTACTCAGTCATTGACCTCTTT 57.192 39.130 13.14 0.00 32.18 2.52
3756 4831 6.174720 TGTACTCAGTCATTGACCTCTTTT 57.825 37.500 13.14 0.00 32.18 2.27
3757 4832 7.297936 TGTACTCAGTCATTGACCTCTTTTA 57.702 36.000 13.14 0.00 32.18 1.52
3758 4833 7.907389 TGTACTCAGTCATTGACCTCTTTTAT 58.093 34.615 13.14 0.00 32.18 1.40
3759 4834 8.375506 TGTACTCAGTCATTGACCTCTTTTATT 58.624 33.333 13.14 0.00 32.18 1.40
3760 4835 7.678947 ACTCAGTCATTGACCTCTTTTATTG 57.321 36.000 13.14 2.33 32.18 1.90
3772 4847 9.179909 TGACCTCTTTTATTGTAGTTTTCACAA 57.820 29.630 0.00 0.00 40.01 3.33
3863 4938 4.452455 CGGAGAAACTGTTTGCTGATAACT 59.548 41.667 11.03 0.00 0.00 2.24
3901 4976 7.801893 TCACATACCTTACTCCCTTAGAAAA 57.198 36.000 0.00 0.00 0.00 2.29
3917 4992 8.894731 CCCTTAGAAAATCTAAAGTAAGGCTTC 58.105 37.037 1.30 0.00 38.38 3.86
4026 5101 3.771216 AGTCTGCAACCATTCCAATCTT 58.229 40.909 0.00 0.00 0.00 2.40
4051 5126 2.890311 CTGGTTGTATTGGGCTGAACAA 59.110 45.455 0.00 0.00 0.00 2.83
4053 5128 3.153919 GGTTGTATTGGGCTGAACAAGA 58.846 45.455 0.00 0.00 32.83 3.02
4058 5133 1.691196 TTGGGCTGAACAAGAACAGG 58.309 50.000 0.00 0.00 35.05 4.00
4059 5134 0.843309 TGGGCTGAACAAGAACAGGA 59.157 50.000 0.00 0.00 35.05 3.86
4066 5141 4.326826 CTGAACAAGAACAGGAAGCCATA 58.673 43.478 0.00 0.00 0.00 2.74
4075 5150 3.956744 ACAGGAAGCCATACTTTTCCTC 58.043 45.455 2.17 0.00 45.78 3.71
4166 5241 5.537674 GCTTCACATAAATGATGGGGATTCT 59.462 40.000 0.00 0.00 39.69 2.40
4190 5265 4.009675 GGATCAATTGTTCTGCTGGTGTA 58.990 43.478 14.56 0.00 0.00 2.90
4383 5458 2.224185 CGTATGGGCAATGGTAGCACTA 60.224 50.000 0.00 0.00 36.08 2.74
4391 5466 3.243201 GCAATGGTAGCACTATTCTTGGC 60.243 47.826 0.00 0.00 25.97 4.52
4414 5489 6.421202 GGCGGTTATATCAGTTATAGCTATGC 59.579 42.308 16.77 9.00 0.00 3.14
4502 5577 3.491447 GCTGCATTGGAAGTGACAAAGTT 60.491 43.478 0.00 0.00 0.00 2.66
4512 5587 5.007136 GGAAGTGACAAAGTTCTCAGAAGTG 59.993 44.000 0.00 0.00 38.18 3.16
4665 5756 5.260424 TGGCATGCCAATCTAACTTCTAAA 58.740 37.500 36.95 7.62 44.12 1.85
4761 5852 6.233905 TGTTGTATCCTTATTAGCAGCTGA 57.766 37.500 20.43 0.00 0.00 4.26
4940 6033 7.856145 AAAAATTTACCAAACTCACAATGCA 57.144 28.000 0.00 0.00 0.00 3.96
4957 6050 5.068198 ACAATGCAATATGGATGGACAGTTC 59.932 40.000 0.00 0.00 0.00 3.01
4958 6051 4.508551 TGCAATATGGATGGACAGTTCT 57.491 40.909 0.00 0.00 0.00 3.01
4959 6052 4.454678 TGCAATATGGATGGACAGTTCTC 58.545 43.478 0.00 0.00 0.00 2.87
4960 6053 3.817647 GCAATATGGATGGACAGTTCTCC 59.182 47.826 0.00 0.00 0.00 3.71
5068 6161 9.427821 TCTTCTTATATCCTTTGCTAAGTCTCT 57.572 33.333 7.14 0.00 0.00 3.10
5084 6177 2.507471 GTCTCTCCCCATCCATTGTTCT 59.493 50.000 0.00 0.00 0.00 3.01
5131 6224 2.282462 GGTGTCCTGTTGGGCTGG 60.282 66.667 0.00 0.00 39.11 4.85
5180 6273 3.289407 TTGATCCACCAGTGTGTCAAA 57.711 42.857 10.73 0.00 41.09 2.69
5225 6318 1.315690 CATAGCCAACAGCCATCTGG 58.684 55.000 0.00 0.00 45.47 3.86
5249 6342 6.206829 GGCTTATTTACAGAACCTGTTTGTCT 59.793 38.462 4.85 0.00 42.59 3.41
5338 6554 8.868522 TTCTTGATTTGATATAGGCATAAGGG 57.131 34.615 0.00 0.00 0.00 3.95
5339 6555 6.886459 TCTTGATTTGATATAGGCATAAGGGC 59.114 38.462 0.00 0.00 43.80 5.19
5371 6592 7.169140 GGCTTATTTACAAAACCTGTTTGTCTG 59.831 37.037 7.67 0.00 42.10 3.51
5492 6713 8.459521 TGTTATTGCAAATTGTTTCCGAATAG 57.540 30.769 1.71 0.00 0.00 1.73
5530 6751 9.515226 TTGAATTTGGTTATGCTAGTAGTTCTT 57.485 29.630 0.00 0.00 0.00 2.52
5531 6752 9.515226 TGAATTTGGTTATGCTAGTAGTTCTTT 57.485 29.630 0.00 0.00 0.00 2.52
5534 6755 9.953565 ATTTGGTTATGCTAGTAGTTCTTTACA 57.046 29.630 0.00 0.00 0.00 2.41
5535 6756 8.997621 TTGGTTATGCTAGTAGTTCTTTACAG 57.002 34.615 0.00 0.00 0.00 2.74
5536 6757 8.130671 TGGTTATGCTAGTAGTTCTTTACAGT 57.869 34.615 0.00 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.674068 GAAAGAGAATCCTACCTTTGATTTACT 57.326 33.333 0.00 0.00 33.66 2.24
1 2 8.604890 CGAAAGAGAATCCTACCTTTGATTTAC 58.395 37.037 0.00 0.00 33.66 2.01
2 3 7.280205 GCGAAAGAGAATCCTACCTTTGATTTA 59.720 37.037 0.00 0.00 33.66 1.40
3 4 6.094186 GCGAAAGAGAATCCTACCTTTGATTT 59.906 38.462 0.00 0.00 33.66 2.17
4 5 5.586643 GCGAAAGAGAATCCTACCTTTGATT 59.413 40.000 0.00 0.00 33.66 2.57
5 6 5.104735 AGCGAAAGAGAATCCTACCTTTGAT 60.105 40.000 0.00 0.00 33.66 2.57
6 7 4.223032 AGCGAAAGAGAATCCTACCTTTGA 59.777 41.667 0.00 0.00 33.66 2.69
7 8 4.508662 AGCGAAAGAGAATCCTACCTTTG 58.491 43.478 0.00 0.00 33.66 2.77
8 9 4.828072 AGCGAAAGAGAATCCTACCTTT 57.172 40.909 0.00 0.00 33.66 3.11
9 10 4.468153 AGAAGCGAAAGAGAATCCTACCTT 59.532 41.667 0.00 0.00 33.66 3.50
10 11 4.027437 AGAAGCGAAAGAGAATCCTACCT 58.973 43.478 0.00 0.00 33.66 3.08
11 12 4.394439 AGAAGCGAAAGAGAATCCTACC 57.606 45.455 0.00 0.00 33.66 3.18
12 13 6.729391 AAAAGAAGCGAAAGAGAATCCTAC 57.271 37.500 0.00 0.00 33.66 3.18
39 40 8.796278 CCAATTTGTTTTCGTTCGTAAGTAAAA 58.204 29.630 0.00 0.00 39.48 1.52
40 41 7.967303 ACCAATTTGTTTTCGTTCGTAAGTAAA 59.033 29.630 0.00 0.00 39.48 2.01
41 42 7.428761 CACCAATTTGTTTTCGTTCGTAAGTAA 59.571 33.333 0.00 0.00 39.48 2.24
42 43 6.906143 CACCAATTTGTTTTCGTTCGTAAGTA 59.094 34.615 0.00 0.00 39.48 2.24
43 44 5.740099 CACCAATTTGTTTTCGTTCGTAAGT 59.260 36.000 0.00 0.00 39.48 2.24
44 45 5.331235 GCACCAATTTGTTTTCGTTCGTAAG 60.331 40.000 0.00 0.00 0.00 2.34
45 46 4.499758 GCACCAATTTGTTTTCGTTCGTAA 59.500 37.500 0.00 0.00 0.00 3.18
46 47 4.036352 GCACCAATTTGTTTTCGTTCGTA 58.964 39.130 0.00 0.00 0.00 3.43
47 48 2.855370 GCACCAATTTGTTTTCGTTCGT 59.145 40.909 0.00 0.00 0.00 3.85
48 49 2.217620 GGCACCAATTTGTTTTCGTTCG 59.782 45.455 0.00 0.00 0.00 3.95
49 50 3.852471 GGCACCAATTTGTTTTCGTTC 57.148 42.857 0.00 0.00 0.00 3.95
80 81 3.586100 AAATCAGCCCGCGTTATTTTT 57.414 38.095 4.92 0.00 0.00 1.94
81 82 3.586100 AAAATCAGCCCGCGTTATTTT 57.414 38.095 4.92 6.80 0.00 1.82
82 83 3.192633 AGAAAAATCAGCCCGCGTTATTT 59.807 39.130 4.92 0.57 0.00 1.40
83 84 2.752903 AGAAAAATCAGCCCGCGTTATT 59.247 40.909 4.92 0.00 0.00 1.40
98 99 4.585162 TCCTTTTATTCACCGCCAGAAAAA 59.415 37.500 0.00 0.00 0.00 1.94
128 133 1.156736 AATCTGTTTCCAACCGCGAG 58.843 50.000 8.23 0.00 0.00 5.03
151 156 1.547372 GCGCGTAATTAGGGATCCCTA 59.453 52.381 33.22 33.22 46.14 3.53
153 158 0.034337 TGCGCGTAATTAGGGATCCC 59.966 55.000 24.59 24.59 0.00 3.85
154 159 1.000506 TCTGCGCGTAATTAGGGATCC 59.999 52.381 8.43 1.92 0.00 3.36
155 160 2.329379 CTCTGCGCGTAATTAGGGATC 58.671 52.381 8.43 0.00 0.00 3.36
201 210 1.768510 GCCGCTAATTACGAGGACTC 58.231 55.000 8.43 0.00 0.00 3.36
277 296 1.679977 GGCCAGGCATTCAGCTGAA 60.680 57.895 30.23 30.23 44.79 3.02
278 297 2.044650 GGCCAGGCATTCAGCTGA 60.045 61.111 13.74 13.74 44.79 4.26
279 298 2.874648 TACGGCCAGGCATTCAGCTG 62.875 60.000 15.19 7.63 44.79 4.24
280 299 2.669133 TACGGCCAGGCATTCAGCT 61.669 57.895 15.19 0.00 44.79 4.24
281 300 2.124736 TACGGCCAGGCATTCAGC 60.125 61.111 15.19 0.00 44.65 4.26
282 301 0.464036 TAGTACGGCCAGGCATTCAG 59.536 55.000 15.19 1.03 0.00 3.02
283 302 1.128200 ATAGTACGGCCAGGCATTCA 58.872 50.000 15.19 0.00 0.00 2.57
284 303 3.611766 ATATAGTACGGCCAGGCATTC 57.388 47.619 15.19 0.00 0.00 2.67
285 304 4.530946 ACTTATATAGTACGGCCAGGCATT 59.469 41.667 15.19 0.78 34.56 3.56
286 305 4.094476 ACTTATATAGTACGGCCAGGCAT 58.906 43.478 15.19 2.77 34.56 4.40
287 306 3.503365 ACTTATATAGTACGGCCAGGCA 58.497 45.455 15.19 0.00 34.56 4.75
288 307 4.243270 CAACTTATATAGTACGGCCAGGC 58.757 47.826 1.26 1.26 35.54 4.85
289 308 4.817517 CCAACTTATATAGTACGGCCAGG 58.182 47.826 2.24 0.00 35.54 4.45
290 309 4.243270 GCCAACTTATATAGTACGGCCAG 58.757 47.826 2.24 0.00 44.29 4.85
291 310 4.261578 GCCAACTTATATAGTACGGCCA 57.738 45.455 2.24 0.00 44.29 5.36
294 313 4.380233 CCCGAGCCAACTTATATAGTACGG 60.380 50.000 0.00 0.00 35.54 4.02
295 314 4.380233 CCCCGAGCCAACTTATATAGTACG 60.380 50.000 0.00 0.00 35.54 3.67
296 315 4.620097 GCCCCGAGCCAACTTATATAGTAC 60.620 50.000 0.00 0.00 33.02 2.73
297 316 3.512724 GCCCCGAGCCAACTTATATAGTA 59.487 47.826 0.00 0.00 33.02 1.82
298 317 2.302157 GCCCCGAGCCAACTTATATAGT 59.698 50.000 0.00 0.00 34.98 2.12
381 413 0.528033 TGAGACGGTTGTTTTCGCGA 60.528 50.000 3.71 3.71 0.00 5.87
393 425 1.793258 GAGGCATGATGATGAGACGG 58.207 55.000 0.00 0.00 0.00 4.79
442 474 0.766674 ATACCCCAAGCCGGCAGATA 60.767 55.000 31.54 12.08 0.00 1.98
447 479 0.608308 GGATTATACCCCAAGCCGGC 60.608 60.000 21.89 21.89 0.00 6.13
449 481 1.544759 GGTGGATTATACCCCAAGCCG 60.545 57.143 0.00 0.00 34.09 5.52
450 482 1.497286 TGGTGGATTATACCCCAAGCC 59.503 52.381 0.00 0.00 37.40 4.35
452 484 3.140144 ACCATGGTGGATTATACCCCAAG 59.860 47.826 18.99 0.00 40.96 3.61
453 485 3.117322 CACCATGGTGGATTATACCCCAA 60.117 47.826 33.56 0.00 40.96 4.12
454 486 2.445145 CACCATGGTGGATTATACCCCA 59.555 50.000 33.56 0.00 40.96 4.96
455 487 2.714250 TCACCATGGTGGATTATACCCC 59.286 50.000 38.12 0.00 45.43 4.95
456 488 3.244911 CCTCACCATGGTGGATTATACCC 60.245 52.174 38.12 0.00 45.43 3.69
484 521 0.951040 ACAAAAAGAGCCTCGCCTCG 60.951 55.000 0.00 0.00 36.95 4.63
489 526 4.272018 CAGGATGATACAAAAAGAGCCTCG 59.728 45.833 0.00 0.00 39.69 4.63
494 531 4.884164 GTCCCCAGGATGATACAAAAAGAG 59.116 45.833 0.00 0.00 39.69 2.85
495 532 4.540099 AGTCCCCAGGATGATACAAAAAGA 59.460 41.667 0.00 0.00 39.69 2.52
496 533 4.860022 AGTCCCCAGGATGATACAAAAAG 58.140 43.478 0.00 0.00 39.69 2.27
497 534 4.946160 AGTCCCCAGGATGATACAAAAA 57.054 40.909 0.00 0.00 39.69 1.94
498 535 5.491078 AGTTAGTCCCCAGGATGATACAAAA 59.509 40.000 0.00 0.00 39.69 2.44
499 536 5.036916 AGTTAGTCCCCAGGATGATACAAA 58.963 41.667 0.00 0.00 39.69 2.83
500 537 4.408921 CAGTTAGTCCCCAGGATGATACAA 59.591 45.833 0.00 0.00 39.69 2.41
501 538 3.967326 CAGTTAGTCCCCAGGATGATACA 59.033 47.826 0.00 0.00 39.69 2.29
503 540 4.552883 TCAGTTAGTCCCCAGGATGATA 57.447 45.455 0.00 0.00 39.69 2.15
504 541 3.421394 TCAGTTAGTCCCCAGGATGAT 57.579 47.619 0.00 0.00 39.69 2.45
507 544 5.264395 CAAAATTCAGTTAGTCCCCAGGAT 58.736 41.667 0.00 0.00 32.73 3.24
509 546 3.193479 GCAAAATTCAGTTAGTCCCCAGG 59.807 47.826 0.00 0.00 0.00 4.45
510 547 3.826157 TGCAAAATTCAGTTAGTCCCCAG 59.174 43.478 0.00 0.00 0.00 4.45
532 604 3.563223 CCAGGCCAATCAATCTGAAGAT 58.437 45.455 5.01 0.00 36.07 2.40
544 616 1.305623 CCTCTTGAGCCAGGCCAAT 59.694 57.895 8.22 0.00 0.00 3.16
562 634 2.648059 CAAGATGGATGGAAGGGTCAC 58.352 52.381 0.00 0.00 0.00 3.67
569 641 1.407299 CCGACAGCAAGATGGATGGAA 60.407 52.381 0.00 0.00 0.00 3.53
570 642 0.178767 CCGACAGCAAGATGGATGGA 59.821 55.000 0.00 0.00 0.00 3.41
571 643 0.107508 ACCGACAGCAAGATGGATGG 60.108 55.000 0.00 0.00 0.00 3.51
572 644 2.205074 GTACCGACAGCAAGATGGATG 58.795 52.381 0.00 0.00 0.00 3.51
599 671 1.878522 CGATTCGAGCCTTCCCACG 60.879 63.158 0.00 0.00 0.00 4.94
600 672 0.105039 ATCGATTCGAGCCTTCCCAC 59.895 55.000 14.81 0.00 39.91 4.61
623 695 9.225436 ACATCAAGTAAACACCAACAAAAATTT 57.775 25.926 0.00 0.00 0.00 1.82
624 696 8.785329 ACATCAAGTAAACACCAACAAAAATT 57.215 26.923 0.00 0.00 0.00 1.82
629 701 7.923344 CCAAATACATCAAGTAAACACCAACAA 59.077 33.333 0.00 0.00 36.05 2.83
631 703 7.653647 TCCAAATACATCAAGTAAACACCAAC 58.346 34.615 0.00 0.00 36.05 3.77
632 704 7.825331 TCCAAATACATCAAGTAAACACCAA 57.175 32.000 0.00 0.00 36.05 3.67
633 705 7.888021 AGATCCAAATACATCAAGTAAACACCA 59.112 33.333 0.00 0.00 36.05 4.17
634 706 8.184192 CAGATCCAAATACATCAAGTAAACACC 58.816 37.037 0.00 0.00 36.05 4.16
635 707 8.946085 TCAGATCCAAATACATCAAGTAAACAC 58.054 33.333 0.00 0.00 36.05 3.32
637 709 9.941664 CATCAGATCCAAATACATCAAGTAAAC 57.058 33.333 0.00 0.00 36.05 2.01
638 710 9.904198 TCATCAGATCCAAATACATCAAGTAAA 57.096 29.630 0.00 0.00 36.05 2.01
639 711 9.551734 CTCATCAGATCCAAATACATCAAGTAA 57.448 33.333 0.00 0.00 36.05 2.24
640 712 8.708378 ACTCATCAGATCCAAATACATCAAGTA 58.292 33.333 0.00 0.00 37.06 2.24
641 713 7.498239 CACTCATCAGATCCAAATACATCAAGT 59.502 37.037 0.00 0.00 0.00 3.16
642 714 7.520131 GCACTCATCAGATCCAAATACATCAAG 60.520 40.741 0.00 0.00 0.00 3.02
643 715 6.261603 GCACTCATCAGATCCAAATACATCAA 59.738 38.462 0.00 0.00 0.00 2.57
644 716 5.761726 GCACTCATCAGATCCAAATACATCA 59.238 40.000 0.00 0.00 0.00 3.07
645 717 5.996513 AGCACTCATCAGATCCAAATACATC 59.003 40.000 0.00 0.00 0.00 3.06
646 718 5.938279 AGCACTCATCAGATCCAAATACAT 58.062 37.500 0.00 0.00 0.00 2.29
647 719 5.363562 AGCACTCATCAGATCCAAATACA 57.636 39.130 0.00 0.00 0.00 2.29
648 720 5.587844 ACAAGCACTCATCAGATCCAAATAC 59.412 40.000 0.00 0.00 0.00 1.89
649 721 5.748402 ACAAGCACTCATCAGATCCAAATA 58.252 37.500 0.00 0.00 0.00 1.40
650 722 4.597004 ACAAGCACTCATCAGATCCAAAT 58.403 39.130 0.00 0.00 0.00 2.32
654 726 2.606725 CGAACAAGCACTCATCAGATCC 59.393 50.000 0.00 0.00 0.00 3.36
662 734 0.534203 GGGGAACGAACAAGCACTCA 60.534 55.000 0.00 0.00 0.00 3.41
670 742 3.772572 TCAGATAAGATGGGGAACGAACA 59.227 43.478 0.00 0.00 0.00 3.18
703 787 9.973661 TGAATTCAGATAGGATACCTTCAAAAA 57.026 29.630 3.38 0.00 34.61 1.94
704 788 9.618890 CTGAATTCAGATAGGATACCTTCAAAA 57.381 33.333 28.13 0.00 46.59 2.44
721 805 2.661594 TCGTCGTGTGTCTGAATTCAG 58.338 47.619 26.56 26.56 45.08 3.02
722 806 2.785713 TCGTCGTGTGTCTGAATTCA 57.214 45.000 8.12 8.12 0.00 2.57
723 807 3.241364 CGATTCGTCGTGTGTCTGAATTC 60.241 47.826 0.00 0.00 29.93 2.17
724 808 2.661675 CGATTCGTCGTGTGTCTGAATT 59.338 45.455 0.00 0.00 29.93 2.17
726 810 1.002142 ACGATTCGTCGTGTGTCTGAA 60.002 47.619 5.75 0.00 45.30 3.02
727 811 0.589708 ACGATTCGTCGTGTGTCTGA 59.410 50.000 5.75 0.00 45.30 3.27
728 812 0.975544 GACGATTCGTCGTGTGTCTG 59.024 55.000 22.05 0.00 46.56 3.51
729 813 3.379682 GACGATTCGTCGTGTGTCT 57.620 52.632 22.05 0.00 46.56 3.41
742 826 0.603172 ACGATCCGATCTCCGACGAT 60.603 55.000 6.81 0.00 41.76 3.73
743 827 1.227468 ACGATCCGATCTCCGACGA 60.227 57.895 6.81 0.00 41.76 4.20
760 844 0.744771 GACCGGAGAAGCCCATTCAC 60.745 60.000 9.46 0.00 40.67 3.18
762 846 1.153147 GGACCGGAGAAGCCCATTC 60.153 63.158 9.46 0.00 38.28 2.67
763 847 2.998949 GGACCGGAGAAGCCCATT 59.001 61.111 9.46 0.00 0.00 3.16
805 896 3.197790 CATCAGCGCCTCCAACGG 61.198 66.667 2.29 0.00 0.00 4.44
815 906 2.203056 TTGGATCCGGCATCAGCG 60.203 61.111 7.39 0.00 43.41 5.18
816 907 1.153086 AGTTGGATCCGGCATCAGC 60.153 57.895 7.39 6.41 41.10 4.26
817 908 0.816825 CCAGTTGGATCCGGCATCAG 60.817 60.000 7.39 0.00 37.39 2.90
818 909 1.224315 CCAGTTGGATCCGGCATCA 59.776 57.895 7.39 2.10 37.39 3.07
819 910 1.526887 TCCAGTTGGATCCGGCATC 59.473 57.895 7.39 0.41 39.78 3.91
820 911 3.739922 TCCAGTTGGATCCGGCAT 58.260 55.556 7.39 0.00 39.78 4.40
828 919 1.764571 CTTGGGTCGGTCCAGTTGGA 61.765 60.000 0.00 0.00 43.08 3.53
849 940 4.577246 GGCTAGTGAGAGGCCGCG 62.577 72.222 0.00 0.00 36.37 6.46
852 943 0.324943 TGTTTGGCTAGTGAGAGGCC 59.675 55.000 0.00 0.00 45.45 5.19
853 944 2.284190 GATGTTTGGCTAGTGAGAGGC 58.716 52.381 0.00 0.00 42.25 4.70
854 945 3.196469 TCTGATGTTTGGCTAGTGAGAGG 59.804 47.826 0.00 0.00 0.00 3.69
855 946 4.081752 AGTCTGATGTTTGGCTAGTGAGAG 60.082 45.833 0.00 0.00 0.00 3.20
856 947 3.834813 AGTCTGATGTTTGGCTAGTGAGA 59.165 43.478 0.00 0.00 0.00 3.27
861 959 4.160439 TGGAGTAGTCTGATGTTTGGCTAG 59.840 45.833 0.00 0.00 0.00 3.42
865 963 3.600388 GGTGGAGTAGTCTGATGTTTGG 58.400 50.000 0.00 0.00 0.00 3.28
931 1034 4.156215 ATTTGGGGGCGGATGGGG 62.156 66.667 0.00 0.00 0.00 4.96
932 1035 2.521708 GATTTGGGGGCGGATGGG 60.522 66.667 0.00 0.00 0.00 4.00
992 1095 3.249687 GGAAACGCCATTGAGAGGT 57.750 52.632 0.00 0.00 36.34 3.85
1017 1120 4.357699 GCATCAGAGCCTCCATCG 57.642 61.111 0.00 0.00 0.00 3.84
1191 1294 2.189521 GTGTACCCTCGGGCATGG 59.810 66.667 0.82 0.00 39.32 3.66
1192 1295 2.189521 GGTGTACCCTCGGGCATG 59.810 66.667 0.82 0.00 39.32 4.06
1193 1296 2.285069 TGGTGTACCCTCGGGCAT 60.285 61.111 0.82 0.00 39.32 4.40
1194 1297 3.000819 CTGGTGTACCCTCGGGCA 61.001 66.667 0.82 0.00 39.32 5.36
1195 1298 4.468689 GCTGGTGTACCCTCGGGC 62.469 72.222 0.82 0.00 39.32 6.13
1196 1299 4.143333 CGCTGGTGTACCCTCGGG 62.143 72.222 0.00 0.00 42.03 5.14
1197 1300 3.064987 CTCGCTGGTGTACCCTCGG 62.065 68.421 10.61 0.00 34.29 4.63
1198 1301 2.490217 CTCGCTGGTGTACCCTCG 59.510 66.667 0.00 2.50 34.29 4.63
1199 1302 2.722201 CCCTCGCTGGTGTACCCTC 61.722 68.421 0.00 0.00 34.29 4.30
1200 1303 2.683933 CCCTCGCTGGTGTACCCT 60.684 66.667 0.00 0.00 34.29 4.34
1201 1304 4.468689 GCCCTCGCTGGTGTACCC 62.469 72.222 0.00 0.00 34.29 3.69
1202 1305 4.814294 CGCCCTCGCTGGTGTACC 62.814 72.222 0.00 0.00 0.00 3.34
1203 1306 4.814294 CCGCCCTCGCTGGTGTAC 62.814 72.222 3.43 0.00 33.93 2.90
1218 1321 4.867599 GAGTAAGCGCCCGTCCCG 62.868 72.222 2.29 0.00 0.00 5.14
1219 1322 4.525949 GGAGTAAGCGCCCGTCCC 62.526 72.222 2.29 0.00 0.00 4.46
1220 1323 4.867599 CGGAGTAAGCGCCCGTCC 62.868 72.222 13.07 9.33 38.55 4.79
1221 1324 4.867599 CCGGAGTAAGCGCCCGTC 62.868 72.222 18.53 4.90 41.53 4.79
1224 1327 4.832608 CCACCGGAGTAAGCGCCC 62.833 72.222 9.46 0.00 0.00 6.13
1283 1386 1.819903 GAGATATCGAGTACCTGGCCC 59.180 57.143 0.00 0.00 0.00 5.80
1311 1414 3.133003 AGGATCTGGAATCAAATCGACGT 59.867 43.478 0.00 0.00 0.00 4.34
1319 1422 3.624777 GGAAAGCAGGATCTGGAATCAA 58.375 45.455 0.00 0.00 31.21 2.57
1320 1423 2.092212 GGGAAAGCAGGATCTGGAATCA 60.092 50.000 0.00 0.00 31.21 2.57
1321 1424 2.580962 GGGAAAGCAGGATCTGGAATC 58.419 52.381 0.00 0.00 31.21 2.52
1322 1425 1.133976 CGGGAAAGCAGGATCTGGAAT 60.134 52.381 0.00 0.00 31.21 3.01
1323 1426 0.253044 CGGGAAAGCAGGATCTGGAA 59.747 55.000 0.00 0.00 31.21 3.53
1324 1427 0.617535 TCGGGAAAGCAGGATCTGGA 60.618 55.000 0.00 0.00 31.21 3.86
1325 1428 0.471617 ATCGGGAAAGCAGGATCTGG 59.528 55.000 0.00 0.00 31.21 3.86
1326 1429 1.415659 AGATCGGGAAAGCAGGATCTG 59.584 52.381 1.89 0.00 42.85 2.90
1327 1430 1.415659 CAGATCGGGAAAGCAGGATCT 59.584 52.381 0.00 0.00 44.72 2.75
1328 1431 1.139853 ACAGATCGGGAAAGCAGGATC 59.860 52.381 0.00 0.00 36.42 3.36
1329 1432 1.207791 ACAGATCGGGAAAGCAGGAT 58.792 50.000 0.00 0.00 0.00 3.24
1377 1482 1.415672 TTCCCACGGCCTGAAGAAGT 61.416 55.000 0.00 0.00 0.00 3.01
1407 1512 0.969894 AAGAGGTTGACCAGGACTCG 59.030 55.000 2.56 0.00 38.89 4.18
1410 1515 0.966920 TCGAAGAGGTTGACCAGGAC 59.033 55.000 2.56 0.00 38.89 3.85
1515 1620 1.754745 GGTGAGAGGTCAACAGGCA 59.245 57.895 0.00 0.00 40.52 4.75
1571 1677 5.007430 CGAGAAGATCTGTGGAATTTGATGG 59.993 44.000 0.00 0.00 0.00 3.51
1607 1714 6.402222 ACTAAGGTGCAACAATTTTTCAACA 58.598 32.000 3.64 0.00 39.98 3.33
1620 1727 7.575414 TGAAATTAACAAGACTAAGGTGCAA 57.425 32.000 0.00 0.00 0.00 4.08
1691 1798 9.887406 GTAGTAGTAGTGCAGAGAAGATTAATC 57.113 37.037 7.41 7.41 0.00 1.75
1708 1815 9.837525 AAAAGTGACATTACGAAGTAGTAGTAG 57.162 33.333 0.00 0.00 46.93 2.57
1712 1819 8.355169 AGTGAAAAGTGACATTACGAAGTAGTA 58.645 33.333 0.00 0.00 46.93 1.82
1715 1822 8.428186 AAAGTGAAAAGTGACATTACGAAGTA 57.572 30.769 0.00 0.00 45.11 2.24
1733 1840 7.816995 GCCCATTCATACAAACATAAAAGTGAA 59.183 33.333 0.00 0.00 0.00 3.18
1736 1843 7.178274 TGAGCCCATTCATACAAACATAAAAGT 59.822 33.333 0.00 0.00 0.00 2.66
1748 1855 7.212274 AGCAAAATATTTGAGCCCATTCATAC 58.788 34.615 17.50 0.00 0.00 2.39
1757 1864 7.985476 TGTAGAGTAAGCAAAATATTTGAGCC 58.015 34.615 17.50 7.15 0.00 4.70
1824 1931 7.781324 ATCAGTGTCAAATAGGGAACAAAAT 57.219 32.000 0.00 0.00 0.00 1.82
1864 1972 2.689471 TGCATGGCCTCAATGATGTTAC 59.311 45.455 3.32 0.00 0.00 2.50
1870 1978 2.235891 GATCATGCATGGCCTCAATGA 58.764 47.619 25.97 8.80 0.00 2.57
1881 2376 8.920174 TCATGAAGAAAAATAAGGATCATGCAT 58.080 29.630 0.00 0.00 41.34 3.96
1976 2617 3.354948 AGCTCATGCCTATGTTTGTCA 57.645 42.857 0.00 0.00 40.80 3.58
2086 2735 2.226674 GACTTGTGCTGAAGGTTAAGGC 59.773 50.000 0.00 0.00 0.00 4.35
2100 2749 2.625737 CCTCAGCTACATGGACTTGTG 58.374 52.381 0.00 0.00 0.00 3.33
2130 2779 0.695462 ATCAGGACAGGGCATGGCTA 60.695 55.000 19.78 0.00 36.99 3.93
2151 2800 4.790962 CCTCTGGCGTGGCTGCAT 62.791 66.667 0.50 0.00 36.28 3.96
2186 2835 1.139256 TCACACGGCTTCAACAAGGTA 59.861 47.619 0.00 0.00 0.00 3.08
2196 2845 0.973632 TACCACATCTCACACGGCTT 59.026 50.000 0.00 0.00 0.00 4.35
2197 2846 0.532573 CTACCACATCTCACACGGCT 59.467 55.000 0.00 0.00 0.00 5.52
2198 2847 1.084370 GCTACCACATCTCACACGGC 61.084 60.000 0.00 0.00 0.00 5.68
2199 2848 0.460284 GGCTACCACATCTCACACGG 60.460 60.000 0.00 0.00 0.00 4.94
2200 2849 0.802222 CGGCTACCACATCTCACACG 60.802 60.000 0.00 0.00 0.00 4.49
2201 2850 0.246635 ACGGCTACCACATCTCACAC 59.753 55.000 0.00 0.00 0.00 3.82
2202 2851 0.246360 CACGGCTACCACATCTCACA 59.754 55.000 0.00 0.00 0.00 3.58
2203 2852 1.084370 GCACGGCTACCACATCTCAC 61.084 60.000 0.00 0.00 0.00 3.51
2204 2853 1.218047 GCACGGCTACCACATCTCA 59.782 57.895 0.00 0.00 0.00 3.27
2205 2854 1.521681 GGCACGGCTACCACATCTC 60.522 63.158 0.00 0.00 0.00 2.75
2206 2855 2.584608 GGCACGGCTACCACATCT 59.415 61.111 0.00 0.00 0.00 2.90
2207 2856 2.513897 GGGCACGGCTACCACATC 60.514 66.667 0.00 0.00 0.00 3.06
2208 2857 3.009115 AGGGCACGGCTACCACAT 61.009 61.111 0.00 0.00 0.00 3.21
2209 2858 3.702048 GAGGGCACGGCTACCACA 61.702 66.667 0.00 0.00 0.00 4.17
2210 2859 4.814294 CGAGGGCACGGCTACCAC 62.814 72.222 0.00 0.00 0.00 4.16
2212 2861 4.509737 GACGAGGGCACGGCTACC 62.510 72.222 8.04 0.00 38.37 3.18
2213 2862 4.509737 GGACGAGGGCACGGCTAC 62.510 72.222 8.84 0.00 41.44 3.58
2225 2874 4.100084 TACGGAGGGCTCGGACGA 62.100 66.667 4.68 0.00 34.51 4.20
2226 2875 3.584052 CTACGGAGGGCTCGGACG 61.584 72.222 0.00 0.00 34.51 4.79
2227 2876 3.902086 GCTACGGAGGGCTCGGAC 61.902 72.222 0.00 0.00 34.51 4.79
2230 2879 3.905678 CTGGCTACGGAGGGCTCG 61.906 72.222 0.00 0.00 0.00 5.03
2231 2880 2.442272 TCTGGCTACGGAGGGCTC 60.442 66.667 0.00 0.00 0.00 4.70
2232 2881 2.760385 GTCTGGCTACGGAGGGCT 60.760 66.667 0.00 0.00 31.21 5.19
2233 2882 3.851128 GGTCTGGCTACGGAGGGC 61.851 72.222 0.00 0.00 31.21 5.19
2234 2883 3.528370 CGGTCTGGCTACGGAGGG 61.528 72.222 0.00 0.00 31.21 4.30
2235 2884 2.348888 AACGGTCTGGCTACGGAGG 61.349 63.158 0.00 0.00 31.21 4.30
2236 2885 1.153823 CAACGGTCTGGCTACGGAG 60.154 63.158 0.00 0.00 31.21 4.63
2237 2886 2.967397 CAACGGTCTGGCTACGGA 59.033 61.111 5.42 0.00 0.00 4.69
2238 2887 2.813908 GCAACGGTCTGGCTACGG 60.814 66.667 0.00 0.00 0.00 4.02
2239 2888 2.813908 GGCAACGGTCTGGCTACG 60.814 66.667 8.75 0.00 38.77 3.51
2256 2950 0.940126 GGCTATTGATGCAGTGGACG 59.060 55.000 0.00 0.00 0.00 4.79
2263 2957 1.133699 CAAGGAGGGGCTATTGATGCA 60.134 52.381 0.00 0.00 0.00 3.96
2351 3168 3.673484 CAGCTGGCCAAACCACGG 61.673 66.667 7.01 0.00 46.36 4.94
2585 3457 5.878116 TCAATATACCCAAAACCAGAAGACG 59.122 40.000 0.00 0.00 0.00 4.18
2686 3729 7.765695 ATGAACAGAAAACAATGTACAGGAT 57.234 32.000 0.33 0.00 0.00 3.24
2689 3732 8.562892 AGAGAATGAACAGAAAACAATGTACAG 58.437 33.333 0.33 0.00 0.00 2.74
2690 3733 8.344831 CAGAGAATGAACAGAAAACAATGTACA 58.655 33.333 0.00 0.00 0.00 2.90
2691 3734 8.345565 ACAGAGAATGAACAGAAAACAATGTAC 58.654 33.333 0.00 0.00 0.00 2.90
2692 3735 8.450578 ACAGAGAATGAACAGAAAACAATGTA 57.549 30.769 0.00 0.00 0.00 2.29
2693 3736 7.338800 ACAGAGAATGAACAGAAAACAATGT 57.661 32.000 0.00 0.00 0.00 2.71
2694 3737 6.860023 GGACAGAGAATGAACAGAAAACAATG 59.140 38.462 0.00 0.00 0.00 2.82
2695 3738 6.547141 TGGACAGAGAATGAACAGAAAACAAT 59.453 34.615 0.00 0.00 0.00 2.71
2696 3739 5.885352 TGGACAGAGAATGAACAGAAAACAA 59.115 36.000 0.00 0.00 0.00 2.83
2697 3740 5.436175 TGGACAGAGAATGAACAGAAAACA 58.564 37.500 0.00 0.00 0.00 2.83
2698 3741 5.049129 CCTGGACAGAGAATGAACAGAAAAC 60.049 44.000 0.00 0.00 37.96 2.43
2699 3742 5.065914 CCTGGACAGAGAATGAACAGAAAA 58.934 41.667 0.00 0.00 37.96 2.29
2700 3743 4.505566 CCCTGGACAGAGAATGAACAGAAA 60.506 45.833 0.00 0.00 37.96 2.52
2743 3818 6.409524 TTCAAAAGGTCATCAAGATGCTTT 57.590 33.333 5.19 7.33 38.65 3.51
2746 3821 6.017400 TCTTTCAAAAGGTCATCAAGATGC 57.983 37.500 5.19 1.37 36.45 3.91
2758 3833 1.966354 AGCCTTGCCTCTTTCAAAAGG 59.034 47.619 2.83 0.00 40.35 3.11
2773 3848 1.202940 GGGGTCTTCAACTCAAGCCTT 60.203 52.381 0.00 0.00 0.00 4.35
2780 3855 0.687354 TCAGCAGGGGTCTTCAACTC 59.313 55.000 0.00 0.00 0.00 3.01
2781 3856 0.689623 CTCAGCAGGGGTCTTCAACT 59.310 55.000 0.00 0.00 0.00 3.16
2791 3866 8.682936 AAATATTACTATCAAACTCAGCAGGG 57.317 34.615 0.00 0.00 0.00 4.45
2800 3875 9.095065 ACGGTCACAGAAATATTACTATCAAAC 57.905 33.333 0.00 0.00 0.00 2.93
2806 3881 6.604396 TCAGGACGGTCACAGAAATATTACTA 59.396 38.462 10.76 0.00 0.00 1.82
2808 3883 5.657474 TCAGGACGGTCACAGAAATATTAC 58.343 41.667 10.76 0.00 0.00 1.89
2825 3900 2.045536 CTGCCAGGGCTTCAGGAC 60.046 66.667 12.19 0.00 42.51 3.85
2852 3927 3.304293 GCAAAGGCAATCGCTGATTTTAC 59.696 43.478 1.76 0.00 40.72 2.01
2854 3929 2.340337 GCAAAGGCAATCGCTGATTTT 58.660 42.857 1.76 0.00 40.72 1.82
2857 3932 1.308069 ACGCAAAGGCAATCGCTGAT 61.308 50.000 0.00 0.00 41.24 2.90
2896 3971 1.001815 AGTTTCCACCGCATTTGAACG 60.002 47.619 0.00 0.00 0.00 3.95
2897 3972 2.793278 AGTTTCCACCGCATTTGAAC 57.207 45.000 0.00 0.00 0.00 3.18
2908 3983 1.269257 GCAGTGAAGCCAAGTTTCCAC 60.269 52.381 0.00 0.00 0.00 4.02
2921 3996 6.883756 TCCATATAAACATCAACAGCAGTGAA 59.116 34.615 0.00 0.00 0.00 3.18
2980 4055 8.827177 TCATATTGAAAGTGAACTCGTTAAGT 57.173 30.769 0.00 0.00 41.10 2.24
2998 4073 8.759641 GCATACTCAACTACAGACTTCATATTG 58.240 37.037 0.00 0.00 0.00 1.90
3007 4082 4.333095 TCTCGAGCATACTCAACTACAGAC 59.667 45.833 7.81 0.00 43.66 3.51
3008 4083 4.333095 GTCTCGAGCATACTCAACTACAGA 59.667 45.833 7.81 0.00 43.66 3.41
3011 4086 3.377485 TGGTCTCGAGCATACTCAACTAC 59.623 47.826 7.81 0.00 43.66 2.73
3013 4088 2.164624 GTGGTCTCGAGCATACTCAACT 59.835 50.000 7.81 0.00 43.66 3.16
3019 4094 3.165058 TCATTGTGGTCTCGAGCATAC 57.835 47.619 7.81 6.69 41.20 2.39
3020 4095 3.885724 TTCATTGTGGTCTCGAGCATA 57.114 42.857 7.81 0.00 41.20 3.14
3022 4097 2.542020 TTTCATTGTGGTCTCGAGCA 57.458 45.000 7.81 0.00 36.34 4.26
3031 4106 7.009815 GCACATTCATCAGTTATTTCATTGTGG 59.990 37.037 0.00 0.00 32.39 4.17
3032 4107 7.758076 AGCACATTCATCAGTTATTTCATTGTG 59.242 33.333 0.00 0.00 34.29 3.33
3034 4109 7.758076 ACAGCACATTCATCAGTTATTTCATTG 59.242 33.333 0.00 0.00 0.00 2.82
3035 4110 7.833786 ACAGCACATTCATCAGTTATTTCATT 58.166 30.769 0.00 0.00 0.00 2.57
3043 4118 4.139786 ACTCAACAGCACATTCATCAGTT 58.860 39.130 0.00 0.00 0.00 3.16
3044 4119 3.748083 ACTCAACAGCACATTCATCAGT 58.252 40.909 0.00 0.00 0.00 3.41
3048 4123 2.889045 AGCAACTCAACAGCACATTCAT 59.111 40.909 0.00 0.00 0.00 2.57
3054 4129 2.982470 GCATTTAGCAACTCAACAGCAC 59.018 45.455 0.00 0.00 44.79 4.40
3055 4130 2.350676 CGCATTTAGCAACTCAACAGCA 60.351 45.455 0.00 0.00 46.13 4.41
3059 4134 2.095768 TCAGCGCATTTAGCAACTCAAC 60.096 45.455 11.47 0.00 46.13 3.18
3060 4135 2.150390 TCAGCGCATTTAGCAACTCAA 58.850 42.857 11.47 0.00 46.13 3.02
3062 4137 1.063174 CCTCAGCGCATTTAGCAACTC 59.937 52.381 11.47 0.00 46.13 3.01
3075 4150 0.249868 TGTGTGGAACTTCCTCAGCG 60.250 55.000 12.02 0.00 40.30 5.18
3088 4163 3.381272 ACACCTCTGAAACATTTGTGTGG 59.619 43.478 0.00 0.00 34.47 4.17
3104 4179 0.037326 TCATCACGAGCCAACACCTC 60.037 55.000 0.00 0.00 0.00 3.85
3105 4180 0.320771 GTCATCACGAGCCAACACCT 60.321 55.000 0.00 0.00 0.00 4.00
3143 4218 3.253188 ACATTTTCACGTAGCTGTTGCAT 59.747 39.130 0.00 0.00 42.74 3.96
3156 4231 5.299279 TCACCAAGAGAGGAAACATTTTCAC 59.701 40.000 1.34 0.00 0.00 3.18
3166 4241 5.505181 AAAGCTTATCACCAAGAGAGGAA 57.495 39.130 0.00 0.00 0.00 3.36
3177 4252 7.274250 CACTGCCAAAAGATAAAAGCTTATCAC 59.726 37.037 11.00 0.00 44.08 3.06
3187 4262 5.243507 TCTGAATGCACTGCCAAAAGATAAA 59.756 36.000 0.00 0.00 0.00 1.40
3204 4279 7.008628 CGGCAAAGCTATTAAAAACTCTGAATG 59.991 37.037 0.00 0.00 0.00 2.67
3205 4280 7.029563 CGGCAAAGCTATTAAAAACTCTGAAT 58.970 34.615 0.00 0.00 0.00 2.57
3292 4367 7.058525 TCTGTGATCATCAGCCAAATTAGAAT 58.941 34.615 16.08 0.00 33.48 2.40
3357 4432 6.284891 TCCTTGCCAATATCTTCAAAAAGG 57.715 37.500 0.00 0.00 34.30 3.11
3366 4441 6.313519 TCAGTAACTTCCTTGCCAATATCT 57.686 37.500 0.00 0.00 0.00 1.98
3372 4447 5.045942 TGTCATATCAGTAACTTCCTTGCCA 60.046 40.000 0.00 0.00 0.00 4.92
3417 4492 3.242381 GCATTGCGCCCAAATAAACATTC 60.242 43.478 4.18 0.00 34.05 2.67
3419 4494 2.278854 GCATTGCGCCCAAATAAACAT 58.721 42.857 4.18 0.00 34.05 2.71
3423 4498 1.180907 TCTGCATTGCGCCCAAATAA 58.819 45.000 4.18 0.00 41.33 1.40
3432 4507 3.198068 ACCTACATAGTTCTGCATTGCG 58.802 45.455 3.84 0.00 0.00 4.85
3466 4541 4.983671 AGGACAAAAAGGACAAGAACAC 57.016 40.909 0.00 0.00 0.00 3.32
3483 4558 5.751028 CGATAGTTTCAGAGATGGAAAGGAC 59.249 44.000 0.00 0.00 35.12 3.85
3523 4598 8.026396 ACAGACTGGTAGAGTAAGGTTTAAAA 57.974 34.615 7.51 0.00 33.83 1.52
3575 4650 4.381411 GTGTAACTTCTTGAGCAGGTTCT 58.619 43.478 0.00 0.00 0.00 3.01
3594 4669 9.981371 AAATCAGAATTTCTCACACCCAGGTGT 62.981 40.741 16.80 16.80 44.18 4.16
3595 4670 7.694695 AAATCAGAATTTCTCACACCCAGGTG 61.695 42.308 15.34 15.34 40.09 4.00
3596 4671 2.711009 TCAGAATTTCTCACACCCAGGT 59.289 45.455 0.00 0.00 0.00 4.00
3597 4672 3.423539 TCAGAATTTCTCACACCCAGG 57.576 47.619 0.00 0.00 0.00 4.45
3598 4673 5.972107 AAATCAGAATTTCTCACACCCAG 57.028 39.130 0.00 0.00 28.70 4.45
3614 4689 6.082338 GCGGACAAGCATATTGATAAATCAG 58.918 40.000 0.00 0.00 36.19 2.90
3670 4745 2.276472 TTAACATCAGCGCCATTTGC 57.724 45.000 2.29 0.00 0.00 3.68
3748 4823 9.185680 AGTTGTGAAAACTACAATAAAAGAGGT 57.814 29.630 0.00 0.00 39.88 3.85
3863 4938 5.643379 GGTATGTGAAGCATTCCTTTGAA 57.357 39.130 0.00 0.00 46.93 2.69
3985 5060 2.143008 TTGCAACTCAAGCTGCATTG 57.857 45.000 8.76 4.03 45.17 2.82
4005 5080 3.446442 AGATTGGAATGGTTGCAGACT 57.554 42.857 0.00 0.00 30.85 3.24
4026 5101 3.838565 TCAGCCCAATACAACCAGAAAA 58.161 40.909 0.00 0.00 0.00 2.29
4051 5126 4.043435 AGGAAAAGTATGGCTTCCTGTTCT 59.957 41.667 2.94 0.00 45.76 3.01
4053 5128 4.388577 AGGAAAAGTATGGCTTCCTGTT 57.611 40.909 2.94 0.00 45.76 3.16
4058 5133 6.587273 ACTAGATGAGGAAAAGTATGGCTTC 58.413 40.000 0.00 0.00 36.17 3.86
4059 5134 6.567602 ACTAGATGAGGAAAAGTATGGCTT 57.432 37.500 0.00 0.00 39.52 4.35
4066 5141 6.833933 ACCACAAAAACTAGATGAGGAAAAGT 59.166 34.615 0.00 0.00 0.00 2.66
4074 5149 7.284074 TCCTTAACACCACAAAAACTAGATGA 58.716 34.615 0.00 0.00 0.00 2.92
4075 5150 7.504924 TCCTTAACACCACAAAAACTAGATG 57.495 36.000 0.00 0.00 0.00 2.90
4166 5241 3.256383 CACCAGCAGAACAATTGATCCAA 59.744 43.478 13.59 0.00 0.00 3.53
4190 5265 1.836166 CACCACAGGGATGAGACAGAT 59.164 52.381 0.00 0.00 38.05 2.90
4279 5354 7.064728 AGACAAGTTAACAACTGAGAACAACTC 59.935 37.037 8.61 0.00 41.91 3.01
4300 5375 4.414182 TGGAAAAGGAGAAGGGTAAGACAA 59.586 41.667 0.00 0.00 0.00 3.18
4374 5449 1.134491 ACCGCCAAGAATAGTGCTACC 60.134 52.381 0.00 0.00 0.00 3.18
4383 5458 7.549488 GCTATAACTGATATAACCGCCAAGAAT 59.451 37.037 0.00 0.00 0.00 2.40
4391 5466 6.637254 CCGCATAGCTATAACTGATATAACCG 59.363 42.308 5.77 0.00 0.00 4.44
4512 5587 2.534284 GCCGAAGCTCTTGGAGACAAC 61.534 57.143 3.20 0.00 40.12 3.32
4734 5825 9.056005 CAGCTGCTAATAAGGATACAACATAAA 57.944 33.333 0.00 0.00 41.41 1.40
4794 5885 8.710749 TTAGTAGGTACAGAACAAGGTAGAAA 57.289 34.615 0.00 0.00 0.00 2.52
4923 6016 5.948758 TCCATATTGCATTGTGAGTTTGGTA 59.051 36.000 6.89 0.00 0.00 3.25
4935 6028 5.452255 AGAACTGTCCATCCATATTGCATT 58.548 37.500 0.00 0.00 0.00 3.56
4940 6033 4.310740 AGGGAGAACTGTCCATCCATATT 58.689 43.478 7.81 0.00 38.52 1.28
4980 6073 4.582701 ATTTCAAATTGCAAGACCGTCA 57.417 36.364 4.94 0.00 0.00 4.35
4981 6074 8.583765 GTTAATATTTCAAATTGCAAGACCGTC 58.416 33.333 4.94 0.00 0.00 4.79
4982 6075 8.085296 TGTTAATATTTCAAATTGCAAGACCGT 58.915 29.630 4.94 0.00 0.00 4.83
4983 6076 8.459521 TGTTAATATTTCAAATTGCAAGACCG 57.540 30.769 4.94 0.00 0.00 4.79
5057 6150 1.008327 TGGATGGGGAGAGACTTAGCA 59.992 52.381 0.00 0.00 0.00 3.49
5068 6161 2.649312 ACTTCAGAACAATGGATGGGGA 59.351 45.455 0.00 0.00 0.00 4.81
5103 6196 4.504864 CCAACAGGACACCAAGATAGTCAA 60.505 45.833 0.00 0.00 34.04 3.18
5131 6224 9.566530 AATGAAACAAAAATAACAAAACAAGGC 57.433 25.926 0.00 0.00 0.00 4.35
5180 6273 7.452880 TTTACAAGCTATTCTGTCAGCAAAT 57.547 32.000 0.00 0.00 40.36 2.32
5225 6318 7.078228 CAGACAAACAGGTTCTGTAAATAAGC 58.922 38.462 0.67 0.00 44.62 3.09
5338 6554 6.366061 CAGGTTTTGTAAATAAGCCAGAAAGC 59.634 38.462 0.00 0.00 0.00 3.51
5339 6555 7.433680 ACAGGTTTTGTAAATAAGCCAGAAAG 58.566 34.615 0.00 0.00 38.56 2.62
5340 6556 7.354751 ACAGGTTTTGTAAATAAGCCAGAAA 57.645 32.000 0.00 0.00 38.56 2.52
5371 6592 4.999751 TTCCTTTGCAAACAAAACACAC 57.000 36.364 8.05 0.00 44.90 3.82
5427 6648 9.929180 GATAATAGATATGGTAGTCTGCAAACA 57.071 33.333 0.00 0.00 0.00 2.83
5492 6713 5.738619 ACCAAATTCAATTAGGACCCAAC 57.261 39.130 0.00 0.00 0.00 3.77
5566 7223 7.054124 AGGCCGAGAATTTTAATCATCTACAA 58.946 34.615 0.00 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.