Multiple sequence alignment - TraesCS1A01G441300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G441300 chr1A 100.000 2336 0 0 1 2336 589890166 589892501 0.000000e+00 4314
1 TraesCS1A01G441300 chr1A 96.247 1119 40 1 247 1365 543423552 543422436 0.000000e+00 1832
2 TraesCS1A01G441300 chr1A 99.190 247 2 0 1 247 584792688 584792934 1.650000e-121 446
3 TraesCS1A01G441300 chr1A 99.180 244 2 0 1 244 305683568 305683811 7.660000e-120 440
4 TraesCS1A01G441300 chr1A 98.780 246 3 0 1 246 10784824 10784579 2.760000e-119 438
5 TraesCS1A01G441300 chr1A 98.780 246 3 0 1 246 305676558 305676803 2.760000e-119 438
6 TraesCS1A01G441300 chr1A 98.780 246 3 0 1 246 589883135 589883380 2.760000e-119 438
7 TraesCS1A01G441300 chr5A 96.875 1120 35 0 247 1366 549334431 549335550 0.000000e+00 1875
8 TraesCS1A01G441300 chr5A 98.780 246 3 0 1 246 40590064 40590309 2.760000e-119 438
9 TraesCS1A01G441300 chr7A 96.693 1119 37 0 247 1365 642027015 642028133 0.000000e+00 1862
10 TraesCS1A01G441300 chr7A 96.148 623 23 1 736 1358 174890042 174889421 0.000000e+00 1016
11 TraesCS1A01G441300 chr7A 98.780 246 3 0 1 246 164776918 164776673 2.760000e-119 438
12 TraesCS1A01G441300 chr7A 97.276 257 7 0 1 257 653522077 653521821 9.910000e-119 436
13 TraesCS1A01G441300 chr2A 95.807 1121 46 1 247 1367 2316504 2315385 0.000000e+00 1808
14 TraesCS1A01G441300 chr6A 95.108 1063 50 2 247 1308 100678676 100679737 0.000000e+00 1674
15 TraesCS1A01G441300 chr6A 98.780 246 3 0 1 246 571861608 571861363 2.760000e-119 438
16 TraesCS1A01G441300 chr1D 95.063 1033 50 1 341 1373 481918578 481919609 0.000000e+00 1624
17 TraesCS1A01G441300 chr1D 95.425 612 24 4 756 1366 446279290 446279898 0.000000e+00 972
18 TraesCS1A01G441300 chr1D 96.000 100 4 0 247 346 481902193 481902292 1.860000e-36 163
19 TraesCS1A01G441300 chr7B 94.053 723 29 3 330 1051 674073810 674073101 0.000000e+00 1085
20 TraesCS1A01G441300 chr7B 87.519 649 71 7 1379 2019 697164688 697164042 0.000000e+00 741
21 TraesCS1A01G441300 chr4B 87.307 646 74 7 1379 2019 100844371 100843729 0.000000e+00 732
22 TraesCS1A01G441300 chr3B 87.172 647 73 7 1381 2019 708392623 708391979 0.000000e+00 726
23 TraesCS1A01G441300 chr3B 87.057 649 74 7 1379 2019 264011171 264010525 0.000000e+00 725
24 TraesCS1A01G441300 chr6B 87.037 648 76 5 1379 2019 339351219 339351865 0.000000e+00 725
25 TraesCS1A01G441300 chr2B 87.097 651 71 10 1378 2019 452910313 452910959 0.000000e+00 725
26 TraesCS1A01G441300 chr2B 94.241 382 19 3 985 1365 152714853 152714474 4.330000e-162 580
27 TraesCS1A01G441300 chr1B 87.057 649 74 7 1379 2019 589132590 589133236 0.000000e+00 725
28 TraesCS1A01G441300 chr4D 87.057 649 72 8 1379 2019 443713293 443712649 0.000000e+00 723
29 TraesCS1A01G441300 chr3D 86.507 667 75 11 1381 2039 16320368 16319709 0.000000e+00 719


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G441300 chr1A 589890166 589892501 2335 False 4314 4314 100.000 1 2336 1 chr1A.!!$F5 2335
1 TraesCS1A01G441300 chr1A 543422436 543423552 1116 True 1832 1832 96.247 247 1365 1 chr1A.!!$R2 1118
2 TraesCS1A01G441300 chr5A 549334431 549335550 1119 False 1875 1875 96.875 247 1366 1 chr5A.!!$F2 1119
3 TraesCS1A01G441300 chr7A 642027015 642028133 1118 False 1862 1862 96.693 247 1365 1 chr7A.!!$F1 1118
4 TraesCS1A01G441300 chr7A 174889421 174890042 621 True 1016 1016 96.148 736 1358 1 chr7A.!!$R2 622
5 TraesCS1A01G441300 chr2A 2315385 2316504 1119 True 1808 1808 95.807 247 1367 1 chr2A.!!$R1 1120
6 TraesCS1A01G441300 chr6A 100678676 100679737 1061 False 1674 1674 95.108 247 1308 1 chr6A.!!$F1 1061
7 TraesCS1A01G441300 chr1D 481918578 481919609 1031 False 1624 1624 95.063 341 1373 1 chr1D.!!$F3 1032
8 TraesCS1A01G441300 chr1D 446279290 446279898 608 False 972 972 95.425 756 1366 1 chr1D.!!$F1 610
9 TraesCS1A01G441300 chr7B 674073101 674073810 709 True 1085 1085 94.053 330 1051 1 chr7B.!!$R1 721
10 TraesCS1A01G441300 chr7B 697164042 697164688 646 True 741 741 87.519 1379 2019 1 chr7B.!!$R2 640
11 TraesCS1A01G441300 chr4B 100843729 100844371 642 True 732 732 87.307 1379 2019 1 chr4B.!!$R1 640
12 TraesCS1A01G441300 chr3B 708391979 708392623 644 True 726 726 87.172 1381 2019 1 chr3B.!!$R2 638
13 TraesCS1A01G441300 chr3B 264010525 264011171 646 True 725 725 87.057 1379 2019 1 chr3B.!!$R1 640
14 TraesCS1A01G441300 chr6B 339351219 339351865 646 False 725 725 87.037 1379 2019 1 chr6B.!!$F1 640
15 TraesCS1A01G441300 chr2B 452910313 452910959 646 False 725 725 87.097 1378 2019 1 chr2B.!!$F1 641
16 TraesCS1A01G441300 chr1B 589132590 589133236 646 False 725 725 87.057 1379 2019 1 chr1B.!!$F1 640
17 TraesCS1A01G441300 chr4D 443712649 443713293 644 True 723 723 87.057 1379 2019 1 chr4D.!!$R1 640
18 TraesCS1A01G441300 chr3D 16319709 16320368 659 True 719 719 86.507 1381 2039 1 chr3D.!!$R1 658

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
72 73 0.030908 CCGTTCGGTGCTAGGATCTC 59.969 60.0 2.82 0.0 0.0 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2062 2084 0.040425 GGAGCGCACAATGTCGTTTT 60.04 50.0 11.47 0.0 0.0 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.633199 AGAAGAAGGAGACGTTACGC 57.367 50.000 4.09 0.00 0.00 4.42
20 21 2.161030 AGAAGAAGGAGACGTTACGCT 58.839 47.619 4.09 2.76 0.00 5.07
21 22 2.095161 AGAAGAAGGAGACGTTACGCTG 60.095 50.000 4.09 0.00 0.00 5.18
22 23 1.531423 AGAAGGAGACGTTACGCTGA 58.469 50.000 4.09 0.00 0.00 4.26
23 24 1.199558 AGAAGGAGACGTTACGCTGAC 59.800 52.381 4.09 0.00 0.00 3.51
24 25 0.243095 AAGGAGACGTTACGCTGACC 59.757 55.000 4.09 3.78 0.00 4.02
25 26 1.513586 GGAGACGTTACGCTGACCG 60.514 63.158 4.09 0.00 44.21 4.79
34 35 2.050714 CGCTGACCGTACGTGTGT 60.051 61.111 15.21 4.82 0.00 3.72
35 36 1.659335 CGCTGACCGTACGTGTGTT 60.659 57.895 15.21 0.00 0.00 3.32
36 37 1.850640 GCTGACCGTACGTGTGTTG 59.149 57.895 15.21 0.00 0.00 3.33
37 38 0.595567 GCTGACCGTACGTGTGTTGA 60.596 55.000 15.21 0.00 0.00 3.18
38 39 1.842720 CTGACCGTACGTGTGTTGAA 58.157 50.000 15.21 0.00 0.00 2.69
39 40 1.519758 CTGACCGTACGTGTGTTGAAC 59.480 52.381 15.21 0.00 0.00 3.18
40 41 0.499761 GACCGTACGTGTGTTGAACG 59.500 55.000 15.21 0.00 46.32 3.95
41 42 1.199859 CCGTACGTGTGTTGAACGC 59.800 57.895 15.21 1.20 44.80 4.84
46 47 2.935955 GTGTGTTGAACGCGGAGG 59.064 61.111 12.47 0.00 0.00 4.30
47 48 1.885850 GTGTGTTGAACGCGGAGGT 60.886 57.895 12.47 0.00 0.00 3.85
48 49 1.885388 TGTGTTGAACGCGGAGGTG 60.885 57.895 12.47 0.00 0.00 4.00
49 50 2.970324 TGTTGAACGCGGAGGTGC 60.970 61.111 12.47 0.00 0.00 5.01
50 51 3.723348 GTTGAACGCGGAGGTGCC 61.723 66.667 12.47 0.00 0.00 5.01
66 67 2.202570 CCGTCCGTTCGGTGCTAG 60.203 66.667 11.04 0.00 44.77 3.42
67 68 2.202570 CGTCCGTTCGGTGCTAGG 60.203 66.667 11.04 0.00 0.00 3.02
68 69 2.693762 CGTCCGTTCGGTGCTAGGA 61.694 63.158 11.04 0.00 0.00 2.94
69 70 1.814527 GTCCGTTCGGTGCTAGGAT 59.185 57.895 11.04 0.00 33.15 3.24
70 71 0.248949 GTCCGTTCGGTGCTAGGATC 60.249 60.000 11.04 0.00 33.15 3.36
71 72 0.395311 TCCGTTCGGTGCTAGGATCT 60.395 55.000 11.04 0.00 0.00 2.75
72 73 0.030908 CCGTTCGGTGCTAGGATCTC 59.969 60.000 2.82 0.00 0.00 2.75
73 74 0.030908 CGTTCGGTGCTAGGATCTCC 59.969 60.000 0.00 0.00 0.00 3.71
74 75 0.030908 GTTCGGTGCTAGGATCTCCG 59.969 60.000 5.55 5.55 42.08 4.63
75 76 1.107538 TTCGGTGCTAGGATCTCCGG 61.108 60.000 11.08 0.00 40.00 5.14
76 77 1.828660 CGGTGCTAGGATCTCCGGT 60.829 63.158 0.00 0.00 42.08 5.28
77 78 1.742768 GGTGCTAGGATCTCCGGTG 59.257 63.158 0.00 0.00 42.08 4.94
78 79 0.755698 GGTGCTAGGATCTCCGGTGA 60.756 60.000 8.96 8.96 42.08 4.02
79 80 1.333177 GTGCTAGGATCTCCGGTGAT 58.667 55.000 18.63 18.63 42.08 3.06
80 81 1.689273 GTGCTAGGATCTCCGGTGATT 59.311 52.381 19.47 8.05 42.08 2.57
81 82 2.103263 GTGCTAGGATCTCCGGTGATTT 59.897 50.000 19.47 13.39 42.08 2.17
82 83 2.103094 TGCTAGGATCTCCGGTGATTTG 59.897 50.000 19.47 11.15 42.08 2.32
83 84 2.548920 GCTAGGATCTCCGGTGATTTGG 60.549 54.545 19.47 13.63 42.08 3.28
84 85 1.879575 AGGATCTCCGGTGATTTGGA 58.120 50.000 19.47 0.40 42.08 3.53
85 86 2.412591 AGGATCTCCGGTGATTTGGAT 58.587 47.619 19.47 0.00 42.08 3.41
86 87 2.370189 AGGATCTCCGGTGATTTGGATC 59.630 50.000 19.47 7.17 42.08 3.36
87 88 2.104792 GGATCTCCGGTGATTTGGATCA 59.895 50.000 19.47 0.00 39.92 2.92
95 96 2.448926 TGATTTGGATCACGTCGTGT 57.551 45.000 23.82 12.10 37.37 4.49
96 97 2.761559 TGATTTGGATCACGTCGTGTT 58.238 42.857 23.82 16.52 37.37 3.32
97 98 2.734606 TGATTTGGATCACGTCGTGTTC 59.265 45.455 23.82 23.12 37.37 3.18
98 99 1.133407 TTTGGATCACGTCGTGTTCG 58.867 50.000 23.82 0.00 34.28 3.95
99 100 0.311477 TTGGATCACGTCGTGTTCGA 59.689 50.000 23.82 18.87 44.12 3.71
100 101 6.445591 GATTTGGATCACGTCGTGTTCGAC 62.446 50.000 23.82 13.65 44.85 4.20
110 111 3.416119 TCGTGTTCGACTACATCATCC 57.584 47.619 0.00 0.00 41.35 3.51
111 112 2.098607 TCGTGTTCGACTACATCATCCC 59.901 50.000 0.00 0.00 41.35 3.85
112 113 2.798499 CGTGTTCGACTACATCATCCCC 60.798 54.545 0.00 0.00 39.71 4.81
113 114 1.407618 TGTTCGACTACATCATCCCCG 59.592 52.381 0.00 0.00 0.00 5.73
114 115 1.407979 GTTCGACTACATCATCCCCGT 59.592 52.381 0.00 0.00 0.00 5.28
115 116 1.771565 TCGACTACATCATCCCCGTT 58.228 50.000 0.00 0.00 0.00 4.44
116 117 1.679680 TCGACTACATCATCCCCGTTC 59.320 52.381 0.00 0.00 0.00 3.95
117 118 1.681793 CGACTACATCATCCCCGTTCT 59.318 52.381 0.00 0.00 0.00 3.01
118 119 2.100916 CGACTACATCATCCCCGTTCTT 59.899 50.000 0.00 0.00 0.00 2.52
119 120 3.430374 CGACTACATCATCCCCGTTCTTT 60.430 47.826 0.00 0.00 0.00 2.52
120 121 3.871594 GACTACATCATCCCCGTTCTTTG 59.128 47.826 0.00 0.00 0.00 2.77
121 122 3.517901 ACTACATCATCCCCGTTCTTTGA 59.482 43.478 0.00 0.00 0.00 2.69
122 123 3.433306 ACATCATCCCCGTTCTTTGAA 57.567 42.857 0.00 0.00 0.00 2.69
123 124 3.081804 ACATCATCCCCGTTCTTTGAAC 58.918 45.455 0.77 0.77 0.00 3.18
124 125 1.803334 TCATCCCCGTTCTTTGAACG 58.197 50.000 21.32 21.32 42.74 3.95
125 126 0.168128 CATCCCCGTTCTTTGAACGC 59.832 55.000 22.42 0.00 41.85 4.84
126 127 0.036306 ATCCCCGTTCTTTGAACGCT 59.964 50.000 22.42 7.97 41.85 5.07
127 128 0.179040 TCCCCGTTCTTTGAACGCTT 60.179 50.000 22.42 0.00 41.85 4.68
128 129 0.237498 CCCCGTTCTTTGAACGCTTC 59.763 55.000 22.42 0.00 41.85 3.86
129 130 0.237498 CCCGTTCTTTGAACGCTTCC 59.763 55.000 22.42 0.00 41.85 3.46
130 131 0.110823 CCGTTCTTTGAACGCTTCCG 60.111 55.000 22.42 8.82 41.85 4.30
131 132 0.721483 CGTTCTTTGAACGCTTCCGC 60.721 55.000 17.66 0.00 36.82 5.54
132 133 0.586802 GTTCTTTGAACGCTTCCGCT 59.413 50.000 0.00 0.00 38.22 5.52
133 134 0.865769 TTCTTTGAACGCTTCCGCTC 59.134 50.000 0.00 0.00 38.22 5.03
134 135 1.130613 CTTTGAACGCTTCCGCTCG 59.869 57.895 0.00 0.00 38.22 5.03
135 136 2.818296 CTTTGAACGCTTCCGCTCGC 62.818 60.000 0.00 0.00 38.22 5.03
141 142 2.331805 GCTTCCGCTCGCGATCTA 59.668 61.111 10.36 0.00 42.83 1.98
142 143 2.011881 GCTTCCGCTCGCGATCTAC 61.012 63.158 10.36 0.00 42.83 2.59
143 144 1.355563 CTTCCGCTCGCGATCTACA 59.644 57.895 10.36 0.00 42.83 2.74
144 145 0.248498 CTTCCGCTCGCGATCTACAA 60.248 55.000 10.36 0.00 42.83 2.41
145 146 0.171679 TTCCGCTCGCGATCTACAAA 59.828 50.000 10.36 0.00 42.83 2.83
146 147 0.248498 TCCGCTCGCGATCTACAAAG 60.248 55.000 10.36 0.00 42.83 2.77
147 148 1.209275 CCGCTCGCGATCTACAAAGG 61.209 60.000 10.36 0.00 42.83 3.11
148 149 0.525668 CGCTCGCGATCTACAAAGGT 60.526 55.000 10.36 0.00 42.83 3.50
149 150 1.268386 CGCTCGCGATCTACAAAGGTA 60.268 52.381 10.36 0.00 42.83 3.08
150 151 2.604855 CGCTCGCGATCTACAAAGGTAT 60.605 50.000 10.36 0.00 42.83 2.73
151 152 2.726760 GCTCGCGATCTACAAAGGTATG 59.273 50.000 10.36 0.00 0.00 2.39
152 153 3.795826 GCTCGCGATCTACAAAGGTATGT 60.796 47.826 10.36 0.00 37.32 2.29
153 154 4.556104 GCTCGCGATCTACAAAGGTATGTA 60.556 45.833 10.36 0.00 34.75 2.29
163 164 4.380531 ACAAAGGTATGTAGATGCATCCG 58.619 43.478 23.06 0.00 0.00 4.18
164 165 4.100963 ACAAAGGTATGTAGATGCATCCGA 59.899 41.667 23.06 8.95 0.00 4.55
165 166 5.221722 ACAAAGGTATGTAGATGCATCCGAT 60.222 40.000 23.06 14.21 0.00 4.18
166 167 4.727507 AGGTATGTAGATGCATCCGATC 57.272 45.455 23.06 11.27 0.00 3.69
167 168 4.089361 AGGTATGTAGATGCATCCGATCA 58.911 43.478 23.06 16.08 0.00 2.92
168 169 4.081972 AGGTATGTAGATGCATCCGATCAC 60.082 45.833 23.06 14.86 0.00 3.06
169 170 4.081972 GGTATGTAGATGCATCCGATCACT 60.082 45.833 23.06 5.34 0.00 3.41
170 171 3.650070 TGTAGATGCATCCGATCACTC 57.350 47.619 23.06 5.75 0.00 3.51
171 172 2.958355 TGTAGATGCATCCGATCACTCA 59.042 45.455 23.06 8.05 0.00 3.41
172 173 3.575687 TGTAGATGCATCCGATCACTCAT 59.424 43.478 23.06 3.09 0.00 2.90
173 174 3.766068 AGATGCATCCGATCACTCATT 57.234 42.857 23.06 0.00 0.00 2.57
174 175 3.400255 AGATGCATCCGATCACTCATTG 58.600 45.455 23.06 0.00 0.00 2.82
175 176 1.302366 TGCATCCGATCACTCATTGC 58.698 50.000 0.00 0.00 0.00 3.56
176 177 1.134310 TGCATCCGATCACTCATTGCT 60.134 47.619 0.00 0.00 0.00 3.91
177 178 2.102925 TGCATCCGATCACTCATTGCTA 59.897 45.455 0.00 0.00 0.00 3.49
178 179 2.735663 GCATCCGATCACTCATTGCTAG 59.264 50.000 0.00 0.00 0.00 3.42
179 180 3.553715 GCATCCGATCACTCATTGCTAGA 60.554 47.826 0.00 0.00 0.00 2.43
180 181 4.818642 CATCCGATCACTCATTGCTAGAT 58.181 43.478 0.00 0.00 0.00 1.98
181 182 4.248691 TCCGATCACTCATTGCTAGATG 57.751 45.455 0.00 0.00 0.00 2.90
182 183 3.891366 TCCGATCACTCATTGCTAGATGA 59.109 43.478 0.00 0.00 34.96 2.92
183 184 4.342092 TCCGATCACTCATTGCTAGATGAA 59.658 41.667 0.00 0.00 35.74 2.57
184 185 4.447054 CCGATCACTCATTGCTAGATGAAC 59.553 45.833 0.00 0.00 35.74 3.18
185 186 5.288015 CGATCACTCATTGCTAGATGAACT 58.712 41.667 0.00 0.00 35.74 3.01
186 187 5.401972 CGATCACTCATTGCTAGATGAACTC 59.598 44.000 0.00 0.00 35.74 3.01
187 188 5.665916 TCACTCATTGCTAGATGAACTCA 57.334 39.130 0.00 0.00 35.74 3.41
188 189 6.231258 TCACTCATTGCTAGATGAACTCAT 57.769 37.500 0.00 0.00 35.74 2.90
189 190 7.352079 TCACTCATTGCTAGATGAACTCATA 57.648 36.000 0.00 0.00 35.74 2.15
190 191 7.432059 TCACTCATTGCTAGATGAACTCATAG 58.568 38.462 0.00 0.00 35.74 2.23
191 192 7.286316 TCACTCATTGCTAGATGAACTCATAGA 59.714 37.037 0.00 0.00 35.74 1.98
192 193 8.089597 CACTCATTGCTAGATGAACTCATAGAT 58.910 37.037 0.00 0.00 35.74 1.98
193 194 8.089597 ACTCATTGCTAGATGAACTCATAGATG 58.910 37.037 0.00 0.00 35.74 2.90
194 195 7.384477 TCATTGCTAGATGAACTCATAGATGG 58.616 38.462 0.00 0.00 36.57 3.51
195 196 6.983906 TTGCTAGATGAACTCATAGATGGA 57.016 37.500 0.00 0.00 36.57 3.41
196 197 7.550597 TTGCTAGATGAACTCATAGATGGAT 57.449 36.000 0.00 0.00 36.57 3.41
197 198 7.167924 TGCTAGATGAACTCATAGATGGATC 57.832 40.000 0.00 0.00 36.57 3.36
198 199 6.952938 TGCTAGATGAACTCATAGATGGATCT 59.047 38.462 0.00 0.00 40.86 2.75
199 200 7.454066 TGCTAGATGAACTCATAGATGGATCTT 59.546 37.037 0.00 0.00 38.32 2.40
200 201 7.760794 GCTAGATGAACTCATAGATGGATCTTG 59.239 40.741 0.00 0.00 38.32 3.02
201 202 7.006865 AGATGAACTCATAGATGGATCTTGG 57.993 40.000 0.00 0.00 38.32 3.61
202 203 6.558014 AGATGAACTCATAGATGGATCTTGGT 59.442 38.462 0.00 0.00 38.32 3.67
203 204 5.922053 TGAACTCATAGATGGATCTTGGTG 58.078 41.667 0.00 0.00 38.32 4.17
204 205 5.662657 TGAACTCATAGATGGATCTTGGTGA 59.337 40.000 0.00 0.00 38.32 4.02
205 206 6.156775 TGAACTCATAGATGGATCTTGGTGAA 59.843 38.462 0.00 0.00 38.32 3.18
206 207 6.566079 ACTCATAGATGGATCTTGGTGAAA 57.434 37.500 0.00 0.00 38.32 2.69
207 208 6.352516 ACTCATAGATGGATCTTGGTGAAAC 58.647 40.000 0.00 0.00 38.32 2.78
239 240 4.912528 TTTTTGTTTTCTGCAACGTTCC 57.087 36.364 0.00 0.00 0.00 3.62
240 241 3.577649 TTTGTTTTCTGCAACGTTCCA 57.422 38.095 0.00 0.00 0.00 3.53
241 242 2.553079 TGTTTTCTGCAACGTTCCAC 57.447 45.000 0.00 0.00 0.00 4.02
242 243 1.813178 TGTTTTCTGCAACGTTCCACA 59.187 42.857 0.00 0.00 0.00 4.17
243 244 2.229062 TGTTTTCTGCAACGTTCCACAA 59.771 40.909 0.00 0.00 0.00 3.33
244 245 2.553079 TTTCTGCAACGTTCCACAAC 57.447 45.000 0.00 0.00 0.00 3.32
245 246 1.454201 TTCTGCAACGTTCCACAACA 58.546 45.000 0.00 0.00 32.14 3.33
258 259 3.495331 TCCACAACACAAGCATGGTATT 58.505 40.909 0.00 0.00 0.00 1.89
286 287 3.383825 GGTGAAATCGGCTTACCTAGAGA 59.616 47.826 0.00 0.00 0.00 3.10
351 352 1.000506 CCAAGTGCTGCAGCTTCAAAT 59.999 47.619 36.61 15.49 42.66 2.32
458 459 3.259064 GCCGTGTAAACTTAGCAGATCA 58.741 45.455 0.00 0.00 0.00 2.92
537 538 4.628333 CACATGCTCTTTTTATGCCCAAAG 59.372 41.667 0.00 0.00 0.00 2.77
589 590 1.602237 GAGGTGATTGAGCGGGGAA 59.398 57.895 0.00 0.00 0.00 3.97
591 592 1.201429 AGGTGATTGAGCGGGGAAGT 61.201 55.000 0.00 0.00 0.00 3.01
639 640 9.495754 GCTGTTCTTGAATATTTGTTATCTGTC 57.504 33.333 0.00 0.00 0.00 3.51
822 823 1.515954 GGCGGCTGCTACTAGTTCA 59.484 57.895 18.85 0.00 42.25 3.18
834 835 7.328277 TGCTACTAGTTCAGCAAAAGAAAAA 57.672 32.000 16.30 0.00 44.49 1.94
978 980 2.159379 GGCAGCAAGTAACAATGTAGCC 60.159 50.000 0.00 0.00 33.69 3.93
1021 1023 0.823460 GGCAGAAGCTCTAGCACTCT 59.177 55.000 4.54 2.98 45.16 3.24
1162 1165 5.389725 GCAATTTTGGATGATTGTTTCCACG 60.390 40.000 0.00 0.00 41.65 4.94
1182 1185 2.030007 CGTGGCAAAGGATTTCACATGT 60.030 45.455 0.00 0.00 35.03 3.21
1186 1189 3.243839 GGCAAAGGATTTCACATGTGTGT 60.244 43.478 24.63 12.19 45.76 3.72
1435 1439 2.120718 ACCTCCTCACCCGAGCTT 59.879 61.111 0.00 0.00 38.00 3.74
1442 1446 4.717629 CACCCGAGCTTGACGCGA 62.718 66.667 15.93 0.00 45.31 5.87
1461 1465 2.759191 GACTCCATCGCTGATATGCAA 58.241 47.619 0.00 0.00 0.00 4.08
1487 1491 0.329596 GGACCTCCAAAGTGGCTCAT 59.670 55.000 0.00 0.00 37.47 2.90
1500 1504 2.294233 GTGGCTCATCAAAAGTGAAGCA 59.706 45.455 3.56 0.00 38.75 3.91
1552 1556 2.202878 CCGGACACGCCATCGAAT 60.203 61.111 0.00 0.00 39.22 3.34
1554 1558 1.366111 CCGGACACGCCATCGAATTT 61.366 55.000 0.00 0.00 39.22 1.82
1565 1570 4.260907 CGCCATCGAATTTCAATCTGACAT 60.261 41.667 0.00 0.00 38.10 3.06
1567 1572 5.220912 GCCATCGAATTTCAATCTGACATCA 60.221 40.000 0.00 0.00 0.00 3.07
1574 1579 3.767902 TCAATCTGACATCACACCACA 57.232 42.857 0.00 0.00 0.00 4.17
1613 1618 5.163258 GGAGGAAACTGTATCTGTCATCCAT 60.163 44.000 0.00 0.00 44.43 3.41
1629 1634 0.250727 CCATGAACCACGAACCCAGT 60.251 55.000 0.00 0.00 0.00 4.00
1652 1657 3.244561 ACATGTTCCGTCTTCCAGATGTT 60.245 43.478 0.00 0.00 29.27 2.71
1686 1691 0.663688 CAATCTGCATCTGCTCCTGC 59.336 55.000 3.53 0.00 42.66 4.85
1733 1738 2.104770 TTGAGCAAACGCTGTCGCAG 62.105 55.000 0.00 2.92 40.78 5.18
1802 1810 3.181468 TGCCATCATTGCTTGAACAAACA 60.181 39.130 0.00 0.00 38.03 2.83
1803 1811 3.998341 GCCATCATTGCTTGAACAAACAT 59.002 39.130 0.00 0.00 38.03 2.71
1857 1866 5.658634 CGATGGGATTATCAGGAAGGATCTA 59.341 44.000 0.00 0.00 0.00 1.98
1888 1899 3.330853 GCGCCGTCATCGTCATCC 61.331 66.667 0.00 0.00 35.01 3.51
1896 1907 1.595382 CATCGTCATCCCCGAAGCC 60.595 63.158 0.00 0.00 37.93 4.35
1916 1927 3.670627 GCCAAAGCGATGAACAACCTAAG 60.671 47.826 0.00 0.00 0.00 2.18
1926 1937 7.042335 CGATGAACAACCTAAGAAACCTAGAT 58.958 38.462 0.00 0.00 0.00 1.98
1951 1962 3.555956 CGAGGGAGTAAAAATGATCCACG 59.444 47.826 0.00 0.00 33.24 4.94
1956 1967 0.247894 TAAAAATGATCCACGCGCGC 60.248 50.000 32.58 23.91 0.00 6.86
1958 1969 1.992233 AAAATGATCCACGCGCGCAT 61.992 50.000 32.58 21.52 0.00 4.73
1962 1973 1.734477 GATCCACGCGCGCATATCT 60.734 57.895 32.58 12.31 0.00 1.98
1972 1983 3.151906 GCATATCTGGCGACCCCT 58.848 61.111 0.00 0.00 0.00 4.79
2035 2057 0.472044 GAGGAAGATTGGCCTCTCCC 59.528 60.000 3.32 0.00 45.72 4.30
2036 2058 0.253347 AGGAAGATTGGCCTCTCCCA 60.253 55.000 3.32 0.00 0.00 4.37
2038 2060 0.182299 GAAGATTGGCCTCTCCCAGG 59.818 60.000 3.32 0.00 46.82 4.45
2039 2061 1.284841 AAGATTGGCCTCTCCCAGGG 61.285 60.000 3.32 0.00 43.70 4.45
2040 2062 2.697644 ATTGGCCTCTCCCAGGGG 60.698 66.667 5.33 0.92 43.70 4.79
2041 2063 3.287954 ATTGGCCTCTCCCAGGGGA 62.288 63.158 5.33 6.92 43.70 4.81
2049 2071 3.293821 TCCCAGGGGAGAGGACAA 58.706 61.111 5.33 0.00 39.76 3.18
2050 2072 1.229529 TCCCAGGGGAGAGGACAAC 60.230 63.158 5.33 0.00 39.76 3.32
2051 2073 2.660064 CCCAGGGGAGAGGACAACG 61.660 68.421 0.00 0.00 37.50 4.10
2052 2074 1.609501 CCAGGGGAGAGGACAACGA 60.610 63.158 0.00 0.00 0.00 3.85
2053 2075 0.978146 CCAGGGGAGAGGACAACGAT 60.978 60.000 0.00 0.00 0.00 3.73
2054 2076 0.905357 CAGGGGAGAGGACAACGATT 59.095 55.000 0.00 0.00 0.00 3.34
2055 2077 1.134670 CAGGGGAGAGGACAACGATTC 60.135 57.143 0.00 0.00 0.00 2.52
2056 2078 0.902531 GGGGAGAGGACAACGATTCA 59.097 55.000 0.00 0.00 0.00 2.57
2057 2079 1.405661 GGGGAGAGGACAACGATTCAC 60.406 57.143 0.00 0.00 0.00 3.18
2059 2081 0.992802 GAGAGGACAACGATTCACGC 59.007 55.000 0.00 0.00 46.94 5.34
2060 2082 0.389948 AGAGGACAACGATTCACGCC 60.390 55.000 0.00 0.00 46.94 5.68
2061 2083 1.683790 GAGGACAACGATTCACGCCG 61.684 60.000 0.00 0.00 46.94 6.46
2062 2084 1.735198 GGACAACGATTCACGCCGA 60.735 57.895 0.00 0.00 46.94 5.54
2063 2085 1.286354 GGACAACGATTCACGCCGAA 61.286 55.000 0.00 0.00 46.94 4.30
2064 2086 0.509499 GACAACGATTCACGCCGAAA 59.491 50.000 0.00 0.00 46.94 3.46
2065 2087 0.938713 ACAACGATTCACGCCGAAAA 59.061 45.000 0.00 0.00 46.94 2.29
2066 2088 1.314581 CAACGATTCACGCCGAAAAC 58.685 50.000 0.00 0.00 46.94 2.43
2067 2089 0.111001 AACGATTCACGCCGAAAACG 60.111 50.000 0.00 12.72 46.94 3.60
2068 2090 0.940519 ACGATTCACGCCGAAAACGA 60.941 50.000 17.73 0.00 46.94 3.85
2069 2091 0.515717 CGATTCACGCCGAAAACGAC 60.516 55.000 0.00 0.00 38.71 4.34
2070 2092 0.509499 GATTCACGCCGAAAACGACA 59.491 50.000 0.00 0.00 37.12 4.35
2071 2093 1.127951 GATTCACGCCGAAAACGACAT 59.872 47.619 0.00 0.00 37.12 3.06
2072 2094 0.938713 TTCACGCCGAAAACGACATT 59.061 45.000 0.00 0.00 0.00 2.71
2073 2095 0.233590 TCACGCCGAAAACGACATTG 59.766 50.000 0.00 0.00 0.00 2.82
2074 2096 0.041663 CACGCCGAAAACGACATTGT 60.042 50.000 0.00 0.00 0.00 2.71
2075 2097 0.041663 ACGCCGAAAACGACATTGTG 60.042 50.000 0.00 0.00 0.00 3.33
2076 2098 1.327292 CGCCGAAAACGACATTGTGC 61.327 55.000 0.00 0.00 0.00 4.57
2077 2099 1.327292 GCCGAAAACGACATTGTGCG 61.327 55.000 0.00 0.57 0.00 5.34
2078 2100 1.327292 CCGAAAACGACATTGTGCGC 61.327 55.000 0.00 0.00 0.00 6.09
2079 2101 0.384230 CGAAAACGACATTGTGCGCT 60.384 50.000 9.73 0.00 0.00 5.92
2080 2102 1.318251 GAAAACGACATTGTGCGCTC 58.682 50.000 9.73 5.51 0.00 5.03
2081 2103 0.040425 AAAACGACATTGTGCGCTCC 60.040 50.000 9.73 0.00 0.00 4.70
2082 2104 0.884704 AAACGACATTGTGCGCTCCT 60.885 50.000 9.73 0.00 0.00 3.69
2083 2105 1.568612 AACGACATTGTGCGCTCCTG 61.569 55.000 9.73 8.24 0.00 3.86
2084 2106 2.029288 CGACATTGTGCGCTCCTGT 61.029 57.895 9.73 11.62 0.00 4.00
2085 2107 1.568612 CGACATTGTGCGCTCCTGTT 61.569 55.000 9.73 0.00 0.00 3.16
2086 2108 0.110056 GACATTGTGCGCTCCTGTTG 60.110 55.000 9.73 2.87 0.00 3.33
2087 2109 0.534877 ACATTGTGCGCTCCTGTTGA 60.535 50.000 9.73 0.00 0.00 3.18
2088 2110 0.592637 CATTGTGCGCTCCTGTTGAA 59.407 50.000 9.73 0.00 0.00 2.69
2089 2111 0.593128 ATTGTGCGCTCCTGTTGAAC 59.407 50.000 9.73 0.00 0.00 3.18
2090 2112 1.444119 TTGTGCGCTCCTGTTGAACC 61.444 55.000 9.73 0.00 0.00 3.62
2091 2113 2.664851 TGCGCTCCTGTTGAACCG 60.665 61.111 9.73 0.00 0.00 4.44
2092 2114 2.665185 GCGCTCCTGTTGAACCGT 60.665 61.111 0.00 0.00 0.00 4.83
2093 2115 2.251642 GCGCTCCTGTTGAACCGTT 61.252 57.895 0.00 0.00 0.00 4.44
2094 2116 1.569493 CGCTCCTGTTGAACCGTTG 59.431 57.895 0.00 0.00 0.00 4.10
2095 2117 1.282875 GCTCCTGTTGAACCGTTGC 59.717 57.895 0.00 0.00 0.00 4.17
2096 2118 1.166531 GCTCCTGTTGAACCGTTGCT 61.167 55.000 0.00 0.00 0.00 3.91
2097 2119 1.308998 CTCCTGTTGAACCGTTGCTT 58.691 50.000 0.00 0.00 0.00 3.91
2098 2120 1.264288 CTCCTGTTGAACCGTTGCTTC 59.736 52.381 0.00 0.00 0.00 3.86
2099 2121 1.021202 CCTGTTGAACCGTTGCTTCA 58.979 50.000 0.00 0.00 0.00 3.02
2100 2122 1.608590 CCTGTTGAACCGTTGCTTCAT 59.391 47.619 0.00 0.00 0.00 2.57
2101 2123 2.034558 CCTGTTGAACCGTTGCTTCATT 59.965 45.455 0.00 0.00 0.00 2.57
2102 2124 3.044986 CTGTTGAACCGTTGCTTCATTG 58.955 45.455 0.00 0.00 0.00 2.82
2103 2125 2.425312 TGTTGAACCGTTGCTTCATTGT 59.575 40.909 0.00 0.00 0.00 2.71
2104 2126 3.119316 TGTTGAACCGTTGCTTCATTGTT 60.119 39.130 0.00 0.00 0.00 2.83
2105 2127 3.791973 TGAACCGTTGCTTCATTGTTT 57.208 38.095 0.00 0.00 0.00 2.83
2106 2128 4.116747 TGAACCGTTGCTTCATTGTTTT 57.883 36.364 0.00 0.00 0.00 2.43
2107 2129 4.499183 TGAACCGTTGCTTCATTGTTTTT 58.501 34.783 0.00 0.00 0.00 1.94
2147 2169 3.724508 TTTTTCGGAAATGCAGCTTCA 57.275 38.095 3.67 0.00 0.00 3.02
2148 2170 3.940209 TTTTCGGAAATGCAGCTTCAT 57.060 38.095 3.67 0.00 0.00 2.57
2149 2171 2.925578 TTCGGAAATGCAGCTTCATG 57.074 45.000 0.00 5.46 0.00 3.07
2150 2172 1.097232 TCGGAAATGCAGCTTCATGG 58.903 50.000 0.00 3.06 0.00 3.66
2151 2173 0.813184 CGGAAATGCAGCTTCATGGT 59.187 50.000 0.00 0.00 0.00 3.55
2152 2174 1.203052 CGGAAATGCAGCTTCATGGTT 59.797 47.619 0.00 0.00 0.00 3.67
2153 2175 2.613691 GGAAATGCAGCTTCATGGTTG 58.386 47.619 0.00 0.00 0.00 3.77
2154 2176 2.028748 GGAAATGCAGCTTCATGGTTGT 60.029 45.455 0.00 0.00 0.00 3.32
2155 2177 2.736144 AATGCAGCTTCATGGTTGTG 57.264 45.000 0.00 0.00 0.00 3.33
2156 2178 1.624336 ATGCAGCTTCATGGTTGTGT 58.376 45.000 0.00 0.00 0.00 3.72
2157 2179 1.401761 TGCAGCTTCATGGTTGTGTT 58.598 45.000 0.00 0.00 0.00 3.32
2158 2180 1.067364 TGCAGCTTCATGGTTGTGTTG 59.933 47.619 0.00 0.00 0.00 3.33
2159 2181 1.774639 CAGCTTCATGGTTGTGTTGC 58.225 50.000 0.00 0.00 0.00 4.17
2160 2182 0.311790 AGCTTCATGGTTGTGTTGCG 59.688 50.000 0.00 0.00 0.00 4.85
2161 2183 0.030638 GCTTCATGGTTGTGTTGCGT 59.969 50.000 0.00 0.00 0.00 5.24
2162 2184 1.265635 GCTTCATGGTTGTGTTGCGTA 59.734 47.619 0.00 0.00 0.00 4.42
2163 2185 2.916111 CTTCATGGTTGTGTTGCGTAC 58.084 47.619 0.00 0.00 0.00 3.67
2164 2186 2.248280 TCATGGTTGTGTTGCGTACT 57.752 45.000 0.00 0.00 0.00 2.73
2165 2187 2.566913 TCATGGTTGTGTTGCGTACTT 58.433 42.857 0.00 0.00 0.00 2.24
2166 2188 2.289274 TCATGGTTGTGTTGCGTACTTG 59.711 45.455 0.00 0.00 0.00 3.16
2167 2189 2.025589 TGGTTGTGTTGCGTACTTGA 57.974 45.000 0.00 0.00 0.00 3.02
2168 2190 1.937223 TGGTTGTGTTGCGTACTTGAG 59.063 47.619 0.00 0.00 0.00 3.02
2169 2191 1.937899 GGTTGTGTTGCGTACTTGAGT 59.062 47.619 0.00 0.00 0.00 3.41
2170 2192 2.353579 GGTTGTGTTGCGTACTTGAGTT 59.646 45.455 0.00 0.00 0.00 3.01
2171 2193 3.181504 GGTTGTGTTGCGTACTTGAGTTT 60.182 43.478 0.00 0.00 0.00 2.66
2172 2194 4.408694 GTTGTGTTGCGTACTTGAGTTTT 58.591 39.130 0.00 0.00 0.00 2.43
2173 2195 4.688511 TGTGTTGCGTACTTGAGTTTTT 57.311 36.364 0.00 0.00 0.00 1.94
2194 2216 5.371115 TTTTCTTCGGAAATGTTAGCTGG 57.629 39.130 0.00 0.00 42.61 4.85
2195 2217 2.985896 TCTTCGGAAATGTTAGCTGGG 58.014 47.619 0.00 0.00 0.00 4.45
2196 2218 2.569853 TCTTCGGAAATGTTAGCTGGGA 59.430 45.455 0.00 0.00 0.00 4.37
2197 2219 3.008594 TCTTCGGAAATGTTAGCTGGGAA 59.991 43.478 0.00 0.00 0.00 3.97
2198 2220 2.706890 TCGGAAATGTTAGCTGGGAAC 58.293 47.619 0.00 0.00 0.00 3.62
2211 2233 4.972875 GGAACCATCAGCCAGGAG 57.027 61.111 0.00 0.00 0.00 3.69
2212 2234 1.994463 GGAACCATCAGCCAGGAGT 59.006 57.895 0.00 0.00 0.00 3.85
2213 2235 0.107459 GGAACCATCAGCCAGGAGTC 60.107 60.000 0.00 0.00 0.00 3.36
2214 2236 0.615331 GAACCATCAGCCAGGAGTCA 59.385 55.000 0.00 0.00 0.00 3.41
2215 2237 0.617413 AACCATCAGCCAGGAGTCAG 59.383 55.000 0.00 0.00 0.00 3.51
2216 2238 1.270414 ACCATCAGCCAGGAGTCAGG 61.270 60.000 0.00 0.00 0.00 3.86
2217 2239 1.270414 CCATCAGCCAGGAGTCAGGT 61.270 60.000 0.00 0.00 0.00 4.00
2218 2240 0.107800 CATCAGCCAGGAGTCAGGTG 60.108 60.000 0.00 2.10 0.00 4.00
2219 2241 1.908340 ATCAGCCAGGAGTCAGGTGC 61.908 60.000 0.00 0.00 0.00 5.01
2220 2242 3.325753 AGCCAGGAGTCAGGTGCC 61.326 66.667 0.00 0.00 0.00 5.01
2221 2243 4.416738 GCCAGGAGTCAGGTGCCC 62.417 72.222 0.00 0.00 0.00 5.36
2222 2244 3.721706 CCAGGAGTCAGGTGCCCC 61.722 72.222 0.00 0.00 0.00 5.80
2223 2245 3.721706 CAGGAGTCAGGTGCCCCC 61.722 72.222 0.00 0.00 0.00 5.40
2224 2246 4.270153 AGGAGTCAGGTGCCCCCA 62.270 66.667 0.00 0.00 34.66 4.96
2225 2247 4.035102 GGAGTCAGGTGCCCCCAC 62.035 72.222 0.00 0.00 41.32 4.61
2226 2248 3.249189 GAGTCAGGTGCCCCCACA 61.249 66.667 0.00 0.00 43.88 4.17
2227 2249 2.532715 AGTCAGGTGCCCCCACAT 60.533 61.111 0.00 0.00 43.88 3.21
2228 2250 2.044946 GTCAGGTGCCCCCACATC 60.045 66.667 0.00 0.00 43.88 3.06
2229 2251 2.531428 TCAGGTGCCCCCACATCA 60.531 61.111 0.00 0.00 43.88 3.07
2230 2252 2.044650 CAGGTGCCCCCACATCAG 60.045 66.667 0.00 0.00 43.88 2.90
2231 2253 2.532715 AGGTGCCCCCACATCAGT 60.533 61.111 0.00 0.00 43.88 3.41
2232 2254 2.361610 GGTGCCCCCACATCAGTG 60.362 66.667 0.00 0.00 43.88 3.66
2233 2255 3.064324 GTGCCCCCACATCAGTGC 61.064 66.667 0.00 0.00 44.53 4.40
2234 2256 3.578286 TGCCCCCACATCAGTGCA 61.578 61.111 0.00 0.00 44.53 4.57
2235 2257 3.064324 GCCCCCACATCAGTGCAC 61.064 66.667 9.40 9.40 44.53 4.57
2236 2258 2.361610 CCCCCACATCAGTGCACC 60.362 66.667 14.63 0.00 44.53 5.01
2237 2259 2.361610 CCCCACATCAGTGCACCC 60.362 66.667 14.63 0.00 44.53 4.61
2238 2260 2.435663 CCCACATCAGTGCACCCA 59.564 61.111 14.63 0.00 44.53 4.51
2239 2261 1.973281 CCCACATCAGTGCACCCAC 60.973 63.158 14.63 0.00 44.53 4.61
2240 2262 2.327343 CCACATCAGTGCACCCACG 61.327 63.158 14.63 2.57 46.62 4.94
2241 2263 2.032528 ACATCAGTGCACCCACGG 59.967 61.111 14.63 2.24 46.62 4.94
2242 2264 2.032528 CATCAGTGCACCCACGGT 59.967 61.111 14.63 0.00 46.62 4.83
2251 2273 2.845317 ACCCACGGTGCACCTACA 60.845 61.111 32.28 0.00 32.98 2.74
2252 2274 2.358247 CCCACGGTGCACCTACAC 60.358 66.667 32.28 7.16 39.94 2.90
2253 2275 2.423874 CCACGGTGCACCTACACA 59.576 61.111 32.28 0.00 42.55 3.72
2254 2276 1.227704 CCACGGTGCACCTACACAA 60.228 57.895 32.28 0.00 42.55 3.33
2255 2277 0.816018 CCACGGTGCACCTACACAAA 60.816 55.000 32.28 0.00 42.55 2.83
2256 2278 1.018148 CACGGTGCACCTACACAAAA 58.982 50.000 32.28 0.00 42.55 2.44
2257 2279 1.402259 CACGGTGCACCTACACAAAAA 59.598 47.619 32.28 0.00 42.55 1.94
2309 2331 5.695851 ACTTTGTGGAAGTGATCATCAAC 57.304 39.130 0.00 0.00 46.66 3.18
2310 2332 5.132502 ACTTTGTGGAAGTGATCATCAACA 58.867 37.500 0.00 0.00 46.66 3.33
2311 2333 5.593909 ACTTTGTGGAAGTGATCATCAACAA 59.406 36.000 13.14 13.14 46.66 2.83
2312 2334 6.096705 ACTTTGTGGAAGTGATCATCAACAAA 59.903 34.615 22.23 22.23 46.66 2.83
2313 2335 6.653526 TTGTGGAAGTGATCATCAACAAAT 57.346 33.333 14.33 0.00 0.00 2.32
2314 2336 6.016213 TGTGGAAGTGATCATCAACAAATG 57.984 37.500 4.35 0.00 0.00 2.32
2315 2337 5.535783 TGTGGAAGTGATCATCAACAAATGT 59.464 36.000 4.35 0.00 0.00 2.71
2316 2338 6.040729 TGTGGAAGTGATCATCAACAAATGTT 59.959 34.615 4.35 0.00 39.12 2.71
2317 2339 7.230309 TGTGGAAGTGATCATCAACAAATGTTA 59.770 33.333 4.35 0.00 36.32 2.41
2318 2340 7.752239 GTGGAAGTGATCATCAACAAATGTTAG 59.248 37.037 0.00 0.00 36.32 2.34
2319 2341 7.665145 TGGAAGTGATCATCAACAAATGTTAGA 59.335 33.333 0.00 0.49 36.32 2.10
2320 2342 7.965107 GGAAGTGATCATCAACAAATGTTAGAC 59.035 37.037 0.00 0.00 36.32 2.59
2321 2343 7.984422 AGTGATCATCAACAAATGTTAGACA 57.016 32.000 0.00 0.00 36.32 3.41
2322 2344 8.037382 AGTGATCATCAACAAATGTTAGACAG 57.963 34.615 0.00 0.00 36.32 3.51
2323 2345 7.120285 AGTGATCATCAACAAATGTTAGACAGG 59.880 37.037 0.00 0.00 36.32 4.00
2324 2346 5.627499 TCATCAACAAATGTTAGACAGGC 57.373 39.130 0.00 0.00 36.32 4.85
2325 2347 5.316167 TCATCAACAAATGTTAGACAGGCT 58.684 37.500 0.00 0.00 36.32 4.58
2326 2348 5.769662 TCATCAACAAATGTTAGACAGGCTT 59.230 36.000 0.00 0.00 36.32 4.35
2327 2349 5.437289 TCAACAAATGTTAGACAGGCTTG 57.563 39.130 0.00 0.00 36.32 4.01
2328 2350 3.923017 ACAAATGTTAGACAGGCTTGC 57.077 42.857 0.00 0.00 0.00 4.01
2329 2351 2.558359 ACAAATGTTAGACAGGCTTGCC 59.442 45.455 2.97 2.97 0.00 4.52
2330 2352 2.557924 CAAATGTTAGACAGGCTTGCCA 59.442 45.455 14.54 0.00 0.00 4.92
2331 2353 2.584835 ATGTTAGACAGGCTTGCCAA 57.415 45.000 14.54 0.00 0.00 4.52
2332 2354 1.896220 TGTTAGACAGGCTTGCCAAG 58.104 50.000 14.54 0.00 0.00 3.61
2333 2355 1.142870 TGTTAGACAGGCTTGCCAAGT 59.857 47.619 14.54 11.51 0.00 3.16
2334 2356 2.230660 GTTAGACAGGCTTGCCAAGTT 58.769 47.619 14.54 5.99 0.00 2.66
2335 2357 2.623416 GTTAGACAGGCTTGCCAAGTTT 59.377 45.455 14.54 9.44 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.095161 CAGCGTAACGTCTCCTTCTTCT 60.095 50.000 0.00 0.00 0.00 2.85
1 2 2.095364 TCAGCGTAACGTCTCCTTCTTC 60.095 50.000 0.00 0.00 0.00 2.87
2 3 1.884579 TCAGCGTAACGTCTCCTTCTT 59.115 47.619 0.00 0.00 0.00 2.52
3 4 1.199558 GTCAGCGTAACGTCTCCTTCT 59.800 52.381 0.00 0.00 0.00 2.85
4 5 1.615502 GTCAGCGTAACGTCTCCTTC 58.384 55.000 0.00 0.00 0.00 3.46
5 6 0.243095 GGTCAGCGTAACGTCTCCTT 59.757 55.000 0.00 0.00 0.00 3.36
6 7 1.881602 GGTCAGCGTAACGTCTCCT 59.118 57.895 0.00 0.00 0.00 3.69
7 8 1.513586 CGGTCAGCGTAACGTCTCC 60.514 63.158 0.00 0.00 0.00 3.71
8 9 0.443869 TACGGTCAGCGTAACGTCTC 59.556 55.000 6.65 0.00 40.38 3.36
9 10 0.166814 GTACGGTCAGCGTAACGTCT 59.833 55.000 11.36 0.00 40.38 4.18
10 11 1.122419 CGTACGGTCAGCGTAACGTC 61.122 60.000 11.36 0.00 40.38 4.34
11 12 1.154413 CGTACGGTCAGCGTAACGT 60.154 57.895 11.36 9.35 42.71 3.99
12 13 1.154413 ACGTACGGTCAGCGTAACG 60.154 57.895 21.06 21.46 37.07 3.18
13 14 0.385974 ACACGTACGGTCAGCGTAAC 60.386 55.000 21.06 4.93 37.07 2.50
14 15 0.385849 CACACGTACGGTCAGCGTAA 60.386 55.000 21.06 0.00 37.07 3.18
15 16 1.207339 CACACGTACGGTCAGCGTA 59.793 57.895 21.06 4.67 37.07 4.42
16 17 2.050714 CACACGTACGGTCAGCGT 60.051 61.111 21.06 7.26 39.59 5.07
17 18 1.659335 AACACACGTACGGTCAGCG 60.659 57.895 21.06 0.00 0.00 5.18
18 19 0.595567 TCAACACACGTACGGTCAGC 60.596 55.000 21.06 0.00 0.00 4.26
19 20 1.519758 GTTCAACACACGTACGGTCAG 59.480 52.381 21.06 8.85 0.00 3.51
20 21 1.558741 GTTCAACACACGTACGGTCA 58.441 50.000 21.06 0.00 0.00 4.02
21 22 0.499761 CGTTCAACACACGTACGGTC 59.500 55.000 21.06 1.29 32.80 4.79
22 23 1.481819 GCGTTCAACACACGTACGGT 61.482 55.000 21.06 11.73 39.92 4.83
23 24 1.199859 GCGTTCAACACACGTACGG 59.800 57.895 21.06 11.05 39.92 4.02
24 25 1.155158 CGCGTTCAACACACGTACG 60.155 57.895 15.01 15.01 39.92 3.67
25 26 1.199859 CCGCGTTCAACACACGTAC 59.800 57.895 4.92 0.00 39.92 3.67
26 27 0.935831 CTCCGCGTTCAACACACGTA 60.936 55.000 4.92 0.00 39.92 3.57
27 28 2.202770 TCCGCGTTCAACACACGT 60.203 55.556 4.92 0.00 39.92 4.49
28 29 2.544359 CTCCGCGTTCAACACACG 59.456 61.111 4.92 0.00 40.75 4.49
29 30 1.885850 ACCTCCGCGTTCAACACAC 60.886 57.895 4.92 0.00 0.00 3.82
30 31 1.885388 CACCTCCGCGTTCAACACA 60.885 57.895 4.92 0.00 0.00 3.72
31 32 2.935955 CACCTCCGCGTTCAACAC 59.064 61.111 4.92 0.00 0.00 3.32
32 33 2.970324 GCACCTCCGCGTTCAACA 60.970 61.111 4.92 0.00 0.00 3.33
33 34 3.723348 GGCACCTCCGCGTTCAAC 61.723 66.667 4.92 0.00 0.00 3.18
50 51 2.001361 ATCCTAGCACCGAACGGACG 62.001 60.000 20.14 11.00 38.96 4.79
51 52 0.248949 GATCCTAGCACCGAACGGAC 60.249 60.000 20.14 10.99 38.96 4.79
52 53 0.395311 AGATCCTAGCACCGAACGGA 60.395 55.000 20.14 0.00 38.96 4.69
53 54 0.030908 GAGATCCTAGCACCGAACGG 59.969 60.000 11.83 11.83 42.03 4.44
54 55 0.030908 GGAGATCCTAGCACCGAACG 59.969 60.000 0.00 0.00 0.00 3.95
55 56 0.030908 CGGAGATCCTAGCACCGAAC 59.969 60.000 0.00 0.00 45.31 3.95
56 57 1.107538 CCGGAGATCCTAGCACCGAA 61.108 60.000 0.00 0.00 45.31 4.30
57 58 1.528542 CCGGAGATCCTAGCACCGA 60.529 63.158 0.00 0.00 45.31 4.69
58 59 1.828660 ACCGGAGATCCTAGCACCG 60.829 63.158 9.46 0.00 42.67 4.94
59 60 0.755698 TCACCGGAGATCCTAGCACC 60.756 60.000 9.46 0.00 0.00 5.01
60 61 1.333177 ATCACCGGAGATCCTAGCAC 58.667 55.000 9.46 0.00 0.00 4.40
61 62 2.088104 AATCACCGGAGATCCTAGCA 57.912 50.000 15.13 0.00 0.00 3.49
62 63 2.548920 CCAAATCACCGGAGATCCTAGC 60.549 54.545 15.13 0.00 0.00 3.42
63 64 2.965831 TCCAAATCACCGGAGATCCTAG 59.034 50.000 15.13 5.05 0.00 3.02
64 65 3.040655 TCCAAATCACCGGAGATCCTA 57.959 47.619 15.13 0.00 0.00 2.94
65 66 1.879575 TCCAAATCACCGGAGATCCT 58.120 50.000 15.13 2.86 0.00 3.24
66 67 2.104792 TGATCCAAATCACCGGAGATCC 59.895 50.000 15.13 2.03 36.98 3.36
67 68 3.475566 TGATCCAAATCACCGGAGATC 57.524 47.619 15.13 10.62 36.98 2.75
76 77 2.448926 ACACGACGTGATCCAAATCA 57.551 45.000 33.12 0.00 39.63 2.57
77 78 2.222508 CGAACACGACGTGATCCAAATC 60.223 50.000 33.12 16.44 36.96 2.17
78 79 1.724623 CGAACACGACGTGATCCAAAT 59.275 47.619 33.12 7.10 36.96 2.32
79 80 1.133407 CGAACACGACGTGATCCAAA 58.867 50.000 33.12 0.00 36.96 3.28
80 81 0.311477 TCGAACACGACGTGATCCAA 59.689 50.000 33.12 17.41 36.96 3.53
81 82 0.386352 GTCGAACACGACGTGATCCA 60.386 55.000 33.12 17.67 44.76 3.41
82 83 2.346884 GTCGAACACGACGTGATCC 58.653 57.895 33.12 18.93 44.76 3.36
90 91 2.098607 GGGATGATGTAGTCGAACACGA 59.901 50.000 0.00 0.00 30.75 4.35
91 92 2.460918 GGGATGATGTAGTCGAACACG 58.539 52.381 0.00 0.00 30.75 4.49
92 93 2.798499 CGGGGATGATGTAGTCGAACAC 60.798 54.545 0.00 0.00 30.75 3.32
93 94 1.407618 CGGGGATGATGTAGTCGAACA 59.592 52.381 0.00 0.00 0.00 3.18
94 95 1.407979 ACGGGGATGATGTAGTCGAAC 59.592 52.381 0.00 0.00 0.00 3.95
95 96 1.771565 ACGGGGATGATGTAGTCGAA 58.228 50.000 0.00 0.00 0.00 3.71
96 97 1.679680 GAACGGGGATGATGTAGTCGA 59.320 52.381 0.00 0.00 0.00 4.20
97 98 1.681793 AGAACGGGGATGATGTAGTCG 59.318 52.381 0.00 0.00 0.00 4.18
98 99 3.821421 AAGAACGGGGATGATGTAGTC 57.179 47.619 0.00 0.00 0.00 2.59
99 100 3.517901 TCAAAGAACGGGGATGATGTAGT 59.482 43.478 0.00 0.00 0.00 2.73
100 101 4.137116 TCAAAGAACGGGGATGATGTAG 57.863 45.455 0.00 0.00 0.00 2.74
101 102 4.258543 GTTCAAAGAACGGGGATGATGTA 58.741 43.478 0.00 0.00 0.00 2.29
102 103 3.081804 GTTCAAAGAACGGGGATGATGT 58.918 45.455 0.00 0.00 0.00 3.06
103 104 2.095853 CGTTCAAAGAACGGGGATGATG 59.904 50.000 20.89 0.00 39.73 3.07
104 105 2.356135 CGTTCAAAGAACGGGGATGAT 58.644 47.619 20.89 0.00 39.73 2.45
105 106 1.803334 CGTTCAAAGAACGGGGATGA 58.197 50.000 20.89 0.00 39.73 2.92
106 107 0.168128 GCGTTCAAAGAACGGGGATG 59.832 55.000 27.01 5.43 43.25 3.51
107 108 0.036306 AGCGTTCAAAGAACGGGGAT 59.964 50.000 27.01 2.09 43.25 3.85
108 109 0.179040 AAGCGTTCAAAGAACGGGGA 60.179 50.000 27.01 0.00 43.25 4.81
109 110 0.237498 GAAGCGTTCAAAGAACGGGG 59.763 55.000 27.01 6.65 43.25 5.73
110 111 0.237498 GGAAGCGTTCAAAGAACGGG 59.763 55.000 27.01 7.26 43.25 5.28
111 112 0.110823 CGGAAGCGTTCAAAGAACGG 60.111 55.000 27.01 13.38 43.25 4.44
112 113 3.345087 CGGAAGCGTTCAAAGAACG 57.655 52.632 23.41 23.41 45.56 3.95
125 126 0.248498 TTGTAGATCGCGAGCGGAAG 60.248 55.000 19.77 0.00 40.25 3.46
126 127 0.171679 TTTGTAGATCGCGAGCGGAA 59.828 50.000 19.77 10.05 40.25 4.30
127 128 0.248498 CTTTGTAGATCGCGAGCGGA 60.248 55.000 19.77 8.43 40.25 5.54
128 129 1.209275 CCTTTGTAGATCGCGAGCGG 61.209 60.000 19.77 9.10 40.25 5.52
129 130 0.525668 ACCTTTGTAGATCGCGAGCG 60.526 55.000 19.77 11.64 41.35 5.03
130 131 2.486951 TACCTTTGTAGATCGCGAGC 57.513 50.000 18.21 18.21 0.00 5.03
131 132 3.966154 ACATACCTTTGTAGATCGCGAG 58.034 45.455 16.66 0.00 0.00 5.03
139 140 5.635280 CGGATGCATCTACATACCTTTGTAG 59.365 44.000 25.28 5.47 46.85 2.74
140 141 5.303333 TCGGATGCATCTACATACCTTTGTA 59.697 40.000 25.28 0.00 0.00 2.41
141 142 4.100963 TCGGATGCATCTACATACCTTTGT 59.899 41.667 25.28 0.00 0.00 2.83
142 143 4.631131 TCGGATGCATCTACATACCTTTG 58.369 43.478 25.28 0.00 0.00 2.77
143 144 4.955811 TCGGATGCATCTACATACCTTT 57.044 40.909 25.28 0.00 0.00 3.11
144 145 4.528206 TGATCGGATGCATCTACATACCTT 59.472 41.667 25.28 0.00 0.00 3.50
145 146 4.081972 GTGATCGGATGCATCTACATACCT 60.082 45.833 25.28 3.18 0.00 3.08
146 147 4.081972 AGTGATCGGATGCATCTACATACC 60.082 45.833 25.28 7.43 0.00 2.73
147 148 5.065704 AGTGATCGGATGCATCTACATAC 57.934 43.478 25.28 17.89 0.00 2.39
148 149 4.766891 TGAGTGATCGGATGCATCTACATA 59.233 41.667 25.28 7.87 0.00 2.29
149 150 3.575687 TGAGTGATCGGATGCATCTACAT 59.424 43.478 25.28 14.56 0.00 2.29
150 151 2.958355 TGAGTGATCGGATGCATCTACA 59.042 45.455 25.28 16.38 0.00 2.74
151 152 3.650070 TGAGTGATCGGATGCATCTAC 57.350 47.619 25.28 15.76 0.00 2.59
152 153 4.563061 CAATGAGTGATCGGATGCATCTA 58.437 43.478 25.28 14.70 0.00 1.98
153 154 3.400255 CAATGAGTGATCGGATGCATCT 58.600 45.455 25.28 6.65 0.00 2.90
154 155 2.095869 GCAATGAGTGATCGGATGCATC 60.096 50.000 18.81 18.81 32.80 3.91
155 156 1.878088 GCAATGAGTGATCGGATGCAT 59.122 47.619 0.00 0.00 32.80 3.96
156 157 1.134310 AGCAATGAGTGATCGGATGCA 60.134 47.619 0.00 0.00 34.89 3.96
157 158 1.590932 AGCAATGAGTGATCGGATGC 58.409 50.000 0.00 0.00 0.00 3.91
158 159 4.248691 TCTAGCAATGAGTGATCGGATG 57.751 45.455 0.00 0.00 0.00 3.51
159 160 4.525874 TCATCTAGCAATGAGTGATCGGAT 59.474 41.667 0.00 0.00 32.03 4.18
160 161 3.891366 TCATCTAGCAATGAGTGATCGGA 59.109 43.478 0.00 0.00 32.03 4.55
161 162 4.248691 TCATCTAGCAATGAGTGATCGG 57.751 45.455 0.00 0.00 32.03 4.18
162 163 5.288015 AGTTCATCTAGCAATGAGTGATCG 58.712 41.667 0.00 0.00 37.01 3.69
163 164 6.279123 TGAGTTCATCTAGCAATGAGTGATC 58.721 40.000 0.00 0.00 37.01 2.92
164 165 6.231258 TGAGTTCATCTAGCAATGAGTGAT 57.769 37.500 0.00 0.00 37.01 3.06
165 166 5.665916 TGAGTTCATCTAGCAATGAGTGA 57.334 39.130 0.00 0.00 37.01 3.41
166 167 7.432059 TCTATGAGTTCATCTAGCAATGAGTG 58.568 38.462 0.00 0.00 37.01 3.51
167 168 7.594351 TCTATGAGTTCATCTAGCAATGAGT 57.406 36.000 0.00 0.00 37.01 3.41
168 169 7.546316 CCATCTATGAGTTCATCTAGCAATGAG 59.454 40.741 0.00 0.00 37.01 2.90
169 170 7.234166 TCCATCTATGAGTTCATCTAGCAATGA 59.766 37.037 0.00 0.00 37.76 2.57
170 171 7.384477 TCCATCTATGAGTTCATCTAGCAATG 58.616 38.462 0.00 0.00 37.76 2.82
171 172 7.550597 TCCATCTATGAGTTCATCTAGCAAT 57.449 36.000 0.00 0.00 37.76 3.56
172 173 6.983906 TCCATCTATGAGTTCATCTAGCAA 57.016 37.500 0.00 0.00 37.76 3.91
173 174 6.952938 AGATCCATCTATGAGTTCATCTAGCA 59.047 38.462 0.00 0.00 37.76 3.49
174 175 7.408756 AGATCCATCTATGAGTTCATCTAGC 57.591 40.000 0.00 0.00 37.76 3.42
175 176 8.252417 CCAAGATCCATCTATGAGTTCATCTAG 58.748 40.741 0.00 0.00 35.76 2.43
176 177 7.732140 ACCAAGATCCATCTATGAGTTCATCTA 59.268 37.037 0.00 0.00 35.76 1.98
177 178 6.558014 ACCAAGATCCATCTATGAGTTCATCT 59.442 38.462 0.00 0.00 35.76 2.90
178 179 6.649973 CACCAAGATCCATCTATGAGTTCATC 59.350 42.308 0.00 0.00 35.76 2.92
179 180 6.328410 TCACCAAGATCCATCTATGAGTTCAT 59.672 38.462 0.00 0.00 35.76 2.57
180 181 5.662657 TCACCAAGATCCATCTATGAGTTCA 59.337 40.000 0.00 0.00 35.76 3.18
181 182 6.166984 TCACCAAGATCCATCTATGAGTTC 57.833 41.667 0.00 0.00 35.76 3.01
182 183 6.566079 TTCACCAAGATCCATCTATGAGTT 57.434 37.500 0.00 0.00 35.76 3.01
183 184 6.352516 GTTTCACCAAGATCCATCTATGAGT 58.647 40.000 0.00 0.00 35.76 3.41
184 185 5.762218 GGTTTCACCAAGATCCATCTATGAG 59.238 44.000 0.00 0.00 38.42 2.90
185 186 5.684704 GGTTTCACCAAGATCCATCTATGA 58.315 41.667 0.00 0.00 38.42 2.15
186 187 4.512944 CGGTTTCACCAAGATCCATCTATG 59.487 45.833 0.00 0.00 38.47 2.23
187 188 4.164221 ACGGTTTCACCAAGATCCATCTAT 59.836 41.667 0.00 0.00 38.47 1.98
188 189 3.517901 ACGGTTTCACCAAGATCCATCTA 59.482 43.478 0.00 0.00 38.47 1.98
189 190 2.305927 ACGGTTTCACCAAGATCCATCT 59.694 45.455 0.00 0.00 38.47 2.90
190 191 2.711542 ACGGTTTCACCAAGATCCATC 58.288 47.619 0.00 0.00 38.47 3.51
191 192 2.879103 ACGGTTTCACCAAGATCCAT 57.121 45.000 0.00 0.00 38.47 3.41
192 193 2.027561 CCTACGGTTTCACCAAGATCCA 60.028 50.000 0.00 0.00 38.47 3.41
193 194 2.235402 TCCTACGGTTTCACCAAGATCC 59.765 50.000 0.00 0.00 38.47 3.36
194 195 3.604875 TCCTACGGTTTCACCAAGATC 57.395 47.619 0.00 0.00 38.47 2.75
195 196 4.360951 TTTCCTACGGTTTCACCAAGAT 57.639 40.909 0.00 0.00 38.47 2.40
196 197 3.842007 TTTCCTACGGTTTCACCAAGA 57.158 42.857 0.00 0.00 38.47 3.02
197 198 5.447624 AAATTTCCTACGGTTTCACCAAG 57.552 39.130 0.00 0.00 38.47 3.61
198 199 5.855740 AAAATTTCCTACGGTTTCACCAA 57.144 34.783 0.00 0.00 38.47 3.67
199 200 5.855740 AAAAATTTCCTACGGTTTCACCA 57.144 34.783 0.00 0.00 38.47 4.17
218 219 4.150804 GTGGAACGTTGCAGAAAACAAAAA 59.849 37.500 23.57 0.00 0.00 1.94
219 220 3.675698 GTGGAACGTTGCAGAAAACAAAA 59.324 39.130 23.57 0.00 0.00 2.44
220 221 3.246619 GTGGAACGTTGCAGAAAACAAA 58.753 40.909 23.57 0.00 0.00 2.83
221 222 2.229062 TGTGGAACGTTGCAGAAAACAA 59.771 40.909 23.57 0.00 42.39 2.83
222 223 1.813178 TGTGGAACGTTGCAGAAAACA 59.187 42.857 23.57 13.91 42.39 2.83
223 224 2.553079 TGTGGAACGTTGCAGAAAAC 57.447 45.000 23.57 11.34 42.39 2.43
224 225 2.229062 TGTTGTGGAACGTTGCAGAAAA 59.771 40.909 29.02 23.18 42.39 2.29
225 226 1.813178 TGTTGTGGAACGTTGCAGAAA 59.187 42.857 29.02 20.32 42.39 2.52
226 227 1.131504 GTGTTGTGGAACGTTGCAGAA 59.868 47.619 24.93 24.93 42.39 3.02
227 228 0.730265 GTGTTGTGGAACGTTGCAGA 59.270 50.000 23.57 19.53 42.39 4.26
228 229 0.449786 TGTGTTGTGGAACGTTGCAG 59.550 50.000 23.57 0.00 42.39 4.41
229 230 0.881796 TTGTGTTGTGGAACGTTGCA 59.118 45.000 19.24 19.24 42.39 4.08
230 231 1.544686 CTTGTGTTGTGGAACGTTGC 58.455 50.000 13.47 13.47 42.39 4.17
231 232 1.135546 TGCTTGTGTTGTGGAACGTTG 60.136 47.619 5.00 0.00 42.39 4.10
232 233 1.169577 TGCTTGTGTTGTGGAACGTT 58.830 45.000 0.00 0.00 42.39 3.99
233 234 1.065401 CATGCTTGTGTTGTGGAACGT 59.935 47.619 0.00 0.00 42.39 3.99
234 235 1.600164 CCATGCTTGTGTTGTGGAACG 60.600 52.381 0.00 0.00 42.39 3.95
235 236 1.408702 ACCATGCTTGTGTTGTGGAAC 59.591 47.619 0.00 0.00 34.13 3.62
236 237 1.774110 ACCATGCTTGTGTTGTGGAA 58.226 45.000 0.00 0.00 34.13 3.53
237 238 2.647683 TACCATGCTTGTGTTGTGGA 57.352 45.000 0.00 0.00 34.13 4.02
238 239 3.940209 AATACCATGCTTGTGTTGTGG 57.060 42.857 0.00 0.00 36.06 4.17
239 240 5.531634 AGAAAATACCATGCTTGTGTTGTG 58.468 37.500 0.00 0.00 0.00 3.33
240 241 5.562696 CGAGAAAATACCATGCTTGTGTTGT 60.563 40.000 0.00 0.00 0.00 3.32
241 242 4.853196 CGAGAAAATACCATGCTTGTGTTG 59.147 41.667 0.00 0.00 0.00 3.33
242 243 4.082787 CCGAGAAAATACCATGCTTGTGTT 60.083 41.667 0.00 0.00 0.00 3.32
243 244 3.440173 CCGAGAAAATACCATGCTTGTGT 59.560 43.478 0.00 0.00 0.00 3.72
244 245 3.440173 ACCGAGAAAATACCATGCTTGTG 59.560 43.478 0.00 0.00 0.00 3.33
245 246 3.440173 CACCGAGAAAATACCATGCTTGT 59.560 43.478 0.00 0.00 0.00 3.16
258 259 6.369182 AGGTAAGCCGATTTCACCGAGAAA 62.369 45.833 5.65 5.65 44.21 2.52
351 352 5.317600 TCCAAATGAATTCCCATATCGGA 57.682 39.130 2.27 0.00 36.56 4.55
458 459 5.755375 CACTTCGTGGATAGTTTCATATGCT 59.245 40.000 0.00 0.00 0.00 3.79
537 538 4.520492 AGCATATACCATACTTGCTTTGCC 59.480 41.667 0.00 0.00 40.58 4.52
589 590 3.274455 CTGCTCGGTCGACAGCACT 62.274 63.158 22.55 0.00 33.42 4.40
591 592 4.056125 CCTGCTCGGTCGACAGCA 62.056 66.667 24.15 24.15 35.83 4.41
639 640 2.173519 ACCATTGTCTCATTTGCAGGG 58.826 47.619 0.00 0.00 0.00 4.45
834 835 1.272147 GGTCTCTGCCATGGGTTTCTT 60.272 52.381 15.13 0.00 0.00 2.52
978 980 1.153369 CACATCTGTACAGGCCCCG 60.153 63.158 22.48 9.22 0.00 5.73
1021 1023 4.162320 TGTTGCCAGATTTAAACCAAACCA 59.838 37.500 0.00 0.00 0.00 3.67
1048 1050 3.068590 ACAATCACCTTTGAACAGCCAAG 59.931 43.478 0.00 0.00 34.61 3.61
1162 1165 3.243839 ACACATGTGAAATCCTTTGCCAC 60.244 43.478 31.94 0.00 0.00 5.01
1182 1185 2.512705 TGGCAATGCTCATAACACACA 58.487 42.857 4.82 0.00 0.00 3.72
1186 1189 3.138098 TCCCTATGGCAATGCTCATAACA 59.862 43.478 4.82 0.00 0.00 2.41
1338 1341 3.754965 TCTGAAACTCATCACCCCTTTG 58.245 45.455 0.00 0.00 0.00 2.77
1367 1370 2.115911 GGTGGTGCGTTGGTGTCAA 61.116 57.895 0.00 0.00 0.00 3.18
1368 1371 2.515057 GGTGGTGCGTTGGTGTCA 60.515 61.111 0.00 0.00 0.00 3.58
1369 1372 2.515057 TGGTGGTGCGTTGGTGTC 60.515 61.111 0.00 0.00 0.00 3.67
1370 1373 2.826738 GTGGTGGTGCGTTGGTGT 60.827 61.111 0.00 0.00 0.00 4.16
1371 1374 2.826287 TGTGGTGGTGCGTTGGTG 60.826 61.111 0.00 0.00 0.00 4.17
1372 1375 2.515991 CTGTGGTGGTGCGTTGGT 60.516 61.111 0.00 0.00 0.00 3.67
1373 1376 3.964875 GCTGTGGTGGTGCGTTGG 61.965 66.667 0.00 0.00 0.00 3.77
1374 1377 4.312231 CGCTGTGGTGGTGCGTTG 62.312 66.667 0.00 0.00 44.00 4.10
1391 1394 2.095212 GTCATTCTTTTCTTCGGTGGCC 60.095 50.000 0.00 0.00 0.00 5.36
1442 1446 2.916702 TTGCATATCAGCGATGGAGT 57.083 45.000 0.00 0.00 37.31 3.85
1461 1465 2.643551 CACTTTGGAGGTCCGCAATAT 58.356 47.619 0.00 0.00 39.43 1.28
1500 1504 1.531149 CTGATTCGTTCAACGCCAAGT 59.469 47.619 4.63 0.00 42.21 3.16
1505 1509 0.093026 CGGTCTGATTCGTTCAACGC 59.907 55.000 4.63 0.00 42.21 4.84
1552 1556 4.459330 TGTGGTGTGATGTCAGATTGAAA 58.541 39.130 0.00 0.00 0.00 2.69
1554 1558 3.767902 TGTGGTGTGATGTCAGATTGA 57.232 42.857 0.00 0.00 0.00 2.57
1565 1570 2.353269 CAGCGTTTTAGTTGTGGTGTGA 59.647 45.455 0.00 0.00 0.00 3.58
1567 1572 2.634600 TCAGCGTTTTAGTTGTGGTGT 58.365 42.857 0.00 0.00 0.00 4.16
1574 1579 3.764237 TCCTCCTTCAGCGTTTTAGTT 57.236 42.857 0.00 0.00 0.00 2.24
1598 1603 4.680440 CGTGGTTCATGGATGACAGATACA 60.680 45.833 0.00 0.00 36.36 2.29
1613 1618 1.121378 TGTACTGGGTTCGTGGTTCA 58.879 50.000 0.00 0.00 0.00 3.18
1652 1657 2.815503 CAGATTGTGGTCTGCATCAACA 59.184 45.455 0.00 0.00 39.19 3.33
1686 1691 1.517832 CGGAGCTTGGGAGGTAGTG 59.482 63.158 0.00 0.00 32.79 2.74
1707 1712 1.931551 GCGTTTGCTCAAGTGTCGA 59.068 52.632 0.00 0.00 38.39 4.20
1802 1810 4.907269 GGTTGGGGATGGATTTGGAAATAT 59.093 41.667 0.00 0.00 0.00 1.28
1803 1811 4.265032 TGGTTGGGGATGGATTTGGAAATA 60.265 41.667 0.00 0.00 0.00 1.40
1857 1866 2.415512 GACGGCGCTGAATAAAGTCTTT 59.584 45.455 25.98 2.81 0.00 2.52
1888 1899 1.305219 TTCATCGCTTTGGCTTCGGG 61.305 55.000 0.00 0.00 36.09 5.14
1896 1907 5.356882 TTCTTAGGTTGTTCATCGCTTTG 57.643 39.130 0.00 0.00 0.00 2.77
1916 1927 6.705863 TTACTCCCTCGTAATCTAGGTTTC 57.294 41.667 0.00 0.00 0.00 2.78
1926 1937 6.110707 GTGGATCATTTTTACTCCCTCGTAA 58.889 40.000 0.00 0.00 0.00 3.18
1956 1967 0.605589 GAGAGGGGTCGCCAGATATG 59.394 60.000 8.89 0.00 0.00 1.78
1958 1969 0.755698 GTGAGAGGGGTCGCCAGATA 60.756 60.000 8.89 0.00 0.00 1.98
1972 1983 1.177401 CTCTGTCATCGGTGGTGAGA 58.823 55.000 0.00 0.00 0.00 3.27
2032 2054 1.229529 GTTGTCCTCTCCCCTGGGA 60.230 63.158 16.20 6.36 42.90 4.37
2035 2057 0.905357 AATCGTTGTCCTCTCCCCTG 59.095 55.000 0.00 0.00 0.00 4.45
2036 2058 1.196012 GAATCGTTGTCCTCTCCCCT 58.804 55.000 0.00 0.00 0.00 4.79
2038 2060 1.736032 CGTGAATCGTTGTCCTCTCCC 60.736 57.143 0.00 0.00 34.52 4.30
2039 2061 1.630148 CGTGAATCGTTGTCCTCTCC 58.370 55.000 0.00 0.00 34.52 3.71
2040 2062 0.992802 GCGTGAATCGTTGTCCTCTC 59.007 55.000 0.00 0.00 42.13 3.20
2041 2063 0.389948 GGCGTGAATCGTTGTCCTCT 60.390 55.000 0.00 0.00 42.13 3.69
2042 2064 1.683790 CGGCGTGAATCGTTGTCCTC 61.684 60.000 0.00 0.00 42.13 3.71
2043 2065 1.736645 CGGCGTGAATCGTTGTCCT 60.737 57.895 0.00 0.00 42.13 3.85
2044 2066 1.286354 TTCGGCGTGAATCGTTGTCC 61.286 55.000 6.85 0.00 42.13 4.02
2045 2067 0.509499 TTTCGGCGTGAATCGTTGTC 59.491 50.000 6.85 0.00 42.13 3.18
2046 2068 0.938713 TTTTCGGCGTGAATCGTTGT 59.061 45.000 6.85 0.00 42.13 3.32
2047 2069 1.314581 GTTTTCGGCGTGAATCGTTG 58.685 50.000 6.85 0.00 42.13 4.10
2048 2070 0.111001 CGTTTTCGGCGTGAATCGTT 60.111 50.000 6.85 0.00 42.13 3.85
2049 2071 0.940519 TCGTTTTCGGCGTGAATCGT 60.941 50.000 19.73 0.00 44.25 3.73
2050 2072 0.515717 GTCGTTTTCGGCGTGAATCG 60.516 55.000 6.85 13.59 44.25 3.34
2051 2073 3.269465 GTCGTTTTCGGCGTGAATC 57.731 52.632 6.85 2.07 44.25 2.52
2059 2081 1.327292 GCGCACAATGTCGTTTTCGG 61.327 55.000 0.30 0.00 44.25 4.30
2060 2082 0.384230 AGCGCACAATGTCGTTTTCG 60.384 50.000 11.47 0.00 45.64 3.46
2061 2083 1.318251 GAGCGCACAATGTCGTTTTC 58.682 50.000 11.47 0.00 0.00 2.29
2062 2084 0.040425 GGAGCGCACAATGTCGTTTT 60.040 50.000 11.47 0.00 0.00 2.43
2063 2085 0.884704 AGGAGCGCACAATGTCGTTT 60.885 50.000 11.47 0.00 0.00 3.60
2064 2086 1.301716 AGGAGCGCACAATGTCGTT 60.302 52.632 11.47 1.84 0.00 3.85
2065 2087 2.029288 CAGGAGCGCACAATGTCGT 61.029 57.895 11.47 0.00 0.00 4.34
2066 2088 1.568612 AACAGGAGCGCACAATGTCG 61.569 55.000 11.47 1.89 0.00 4.35
2067 2089 0.110056 CAACAGGAGCGCACAATGTC 60.110 55.000 11.47 0.00 0.00 3.06
2068 2090 0.534877 TCAACAGGAGCGCACAATGT 60.535 50.000 11.47 9.75 0.00 2.71
2069 2091 0.592637 TTCAACAGGAGCGCACAATG 59.407 50.000 11.47 9.03 0.00 2.82
2070 2092 0.593128 GTTCAACAGGAGCGCACAAT 59.407 50.000 11.47 0.00 0.00 2.71
2071 2093 1.444119 GGTTCAACAGGAGCGCACAA 61.444 55.000 11.47 0.00 0.00 3.33
2072 2094 1.891919 GGTTCAACAGGAGCGCACA 60.892 57.895 11.47 0.00 0.00 4.57
2073 2095 2.946762 GGTTCAACAGGAGCGCAC 59.053 61.111 11.47 1.97 0.00 5.34
2074 2096 2.664851 CGGTTCAACAGGAGCGCA 60.665 61.111 11.47 0.00 0.00 6.09
2075 2097 2.251642 AACGGTTCAACAGGAGCGC 61.252 57.895 0.00 0.00 40.12 5.92
2076 2098 1.569493 CAACGGTTCAACAGGAGCG 59.431 57.895 0.00 0.00 41.99 5.03
2077 2099 1.166531 AGCAACGGTTCAACAGGAGC 61.167 55.000 0.00 0.00 0.00 4.70
2078 2100 1.264288 GAAGCAACGGTTCAACAGGAG 59.736 52.381 1.25 0.00 39.49 3.69
2079 2101 1.305201 GAAGCAACGGTTCAACAGGA 58.695 50.000 1.25 0.00 39.49 3.86
2080 2102 1.021202 TGAAGCAACGGTTCAACAGG 58.979 50.000 6.16 0.00 45.12 4.00
2127 2149 3.724508 TGAAGCTGCATTTCCGAAAAA 57.275 38.095 1.02 0.00 0.00 1.94
2128 2150 3.577667 CATGAAGCTGCATTTCCGAAAA 58.422 40.909 3.72 0.00 0.00 2.29
2129 2151 2.094597 CCATGAAGCTGCATTTCCGAAA 60.095 45.455 3.72 0.00 0.00 3.46
2130 2152 1.473677 CCATGAAGCTGCATTTCCGAA 59.526 47.619 3.72 0.00 0.00 4.30
2131 2153 1.097232 CCATGAAGCTGCATTTCCGA 58.903 50.000 3.72 0.00 0.00 4.55
2132 2154 0.813184 ACCATGAAGCTGCATTTCCG 59.187 50.000 3.72 0.00 0.00 4.30
2133 2155 2.028748 ACAACCATGAAGCTGCATTTCC 60.029 45.455 3.72 0.00 0.00 3.13
2134 2156 2.991190 CACAACCATGAAGCTGCATTTC 59.009 45.455 3.72 0.00 0.00 2.17
2135 2157 2.366266 ACACAACCATGAAGCTGCATTT 59.634 40.909 3.72 0.00 0.00 2.32
2136 2158 1.965643 ACACAACCATGAAGCTGCATT 59.034 42.857 3.72 0.00 0.00 3.56
2137 2159 1.624336 ACACAACCATGAAGCTGCAT 58.376 45.000 0.00 0.00 0.00 3.96
2138 2160 1.067364 CAACACAACCATGAAGCTGCA 59.933 47.619 0.00 0.00 0.00 4.41
2139 2161 1.774639 CAACACAACCATGAAGCTGC 58.225 50.000 0.00 0.00 0.00 5.25
2140 2162 1.774639 GCAACACAACCATGAAGCTG 58.225 50.000 0.00 0.00 0.00 4.24
2141 2163 0.311790 CGCAACACAACCATGAAGCT 59.688 50.000 0.00 0.00 0.00 3.74
2142 2164 0.030638 ACGCAACACAACCATGAAGC 59.969 50.000 0.00 0.00 0.00 3.86
2143 2165 2.548057 AGTACGCAACACAACCATGAAG 59.452 45.455 0.00 0.00 0.00 3.02
2144 2166 2.566913 AGTACGCAACACAACCATGAA 58.433 42.857 0.00 0.00 0.00 2.57
2145 2167 2.248280 AGTACGCAACACAACCATGA 57.752 45.000 0.00 0.00 0.00 3.07
2146 2168 2.289274 TCAAGTACGCAACACAACCATG 59.711 45.455 0.00 0.00 0.00 3.66
2147 2169 2.548057 CTCAAGTACGCAACACAACCAT 59.452 45.455 0.00 0.00 0.00 3.55
2148 2170 1.937223 CTCAAGTACGCAACACAACCA 59.063 47.619 0.00 0.00 0.00 3.67
2149 2171 1.937899 ACTCAAGTACGCAACACAACC 59.062 47.619 0.00 0.00 0.00 3.77
2150 2172 3.668596 AACTCAAGTACGCAACACAAC 57.331 42.857 0.00 0.00 0.00 3.32
2151 2173 4.688511 AAAACTCAAGTACGCAACACAA 57.311 36.364 0.00 0.00 0.00 3.33
2152 2174 4.688511 AAAAACTCAAGTACGCAACACA 57.311 36.364 0.00 0.00 0.00 3.72
2171 2193 5.278758 CCCAGCTAACATTTCCGAAGAAAAA 60.279 40.000 0.00 0.00 44.91 1.94
2172 2194 4.217550 CCCAGCTAACATTTCCGAAGAAAA 59.782 41.667 0.00 0.00 44.91 2.29
2173 2195 3.756434 CCCAGCTAACATTTCCGAAGAAA 59.244 43.478 0.00 0.00 45.78 2.52
2174 2196 3.008594 TCCCAGCTAACATTTCCGAAGAA 59.991 43.478 0.00 0.00 0.00 2.52
2175 2197 2.569853 TCCCAGCTAACATTTCCGAAGA 59.430 45.455 0.00 0.00 0.00 2.87
2176 2198 2.985896 TCCCAGCTAACATTTCCGAAG 58.014 47.619 0.00 0.00 0.00 3.79
2177 2199 3.078837 GTTCCCAGCTAACATTTCCGAA 58.921 45.455 0.00 0.00 0.00 4.30
2178 2200 2.617021 GGTTCCCAGCTAACATTTCCGA 60.617 50.000 0.56 0.00 0.00 4.55
2179 2201 1.743394 GGTTCCCAGCTAACATTTCCG 59.257 52.381 0.56 0.00 0.00 4.30
2180 2202 2.802719 TGGTTCCCAGCTAACATTTCC 58.197 47.619 0.56 0.00 0.00 3.13
2181 2203 4.016444 TGATGGTTCCCAGCTAACATTTC 58.984 43.478 0.00 0.00 41.01 2.17
2182 2204 4.019174 CTGATGGTTCCCAGCTAACATTT 58.981 43.478 0.00 0.00 41.01 2.32
2183 2205 3.624777 CTGATGGTTCCCAGCTAACATT 58.375 45.455 0.00 0.00 41.01 2.71
2184 2206 3.287867 CTGATGGTTCCCAGCTAACAT 57.712 47.619 0.00 0.00 41.01 2.71
2185 2207 2.787473 CTGATGGTTCCCAGCTAACA 57.213 50.000 0.00 0.00 41.01 2.41
2191 2213 1.077212 CCTGGCTGATGGTTCCCAG 60.077 63.158 0.00 0.00 43.47 4.45
2192 2214 1.541118 TCCTGGCTGATGGTTCCCA 60.541 57.895 0.00 0.00 38.19 4.37
2193 2215 1.225704 CTCCTGGCTGATGGTTCCC 59.774 63.158 0.00 0.00 0.00 3.97
2194 2216 0.107459 GACTCCTGGCTGATGGTTCC 60.107 60.000 0.00 0.00 0.00 3.62
2195 2217 0.615331 TGACTCCTGGCTGATGGTTC 59.385 55.000 0.00 0.00 0.00 3.62
2196 2218 0.617413 CTGACTCCTGGCTGATGGTT 59.383 55.000 0.00 0.00 0.00 3.67
2197 2219 1.270414 CCTGACTCCTGGCTGATGGT 61.270 60.000 0.00 0.00 0.00 3.55
2198 2220 1.270414 ACCTGACTCCTGGCTGATGG 61.270 60.000 0.00 0.00 35.04 3.51
2199 2221 0.107800 CACCTGACTCCTGGCTGATG 60.108 60.000 0.00 0.00 35.04 3.07
2200 2222 1.908340 GCACCTGACTCCTGGCTGAT 61.908 60.000 0.00 0.00 35.04 2.90
2201 2223 2.587247 GCACCTGACTCCTGGCTGA 61.587 63.158 0.00 0.00 35.04 4.26
2202 2224 2.046507 GCACCTGACTCCTGGCTG 60.047 66.667 0.00 0.00 35.04 4.85
2203 2225 3.325753 GGCACCTGACTCCTGGCT 61.326 66.667 0.00 0.00 35.04 4.75
2214 2236 2.910737 CACTGATGTGGGGGCACCT 61.911 63.158 7.61 0.00 42.63 4.00
2215 2237 2.361610 CACTGATGTGGGGGCACC 60.362 66.667 0.00 0.00 41.28 5.01
2216 2238 3.064324 GCACTGATGTGGGGGCAC 61.064 66.667 0.00 0.00 43.97 5.01
2217 2239 3.578286 TGCACTGATGTGGGGGCA 61.578 61.111 0.00 0.00 43.97 5.36
2218 2240 3.064324 GTGCACTGATGTGGGGGC 61.064 66.667 10.32 0.00 43.97 5.80
2219 2241 2.361610 GGTGCACTGATGTGGGGG 60.362 66.667 17.98 0.00 43.97 5.40
2220 2242 2.361610 GGGTGCACTGATGTGGGG 60.362 66.667 17.98 0.00 43.97 4.96
2221 2243 1.973281 GTGGGTGCACTGATGTGGG 60.973 63.158 17.98 0.00 43.97 4.61
2222 2244 2.327343 CGTGGGTGCACTGATGTGG 61.327 63.158 17.98 0.00 43.97 4.17
2223 2245 2.327343 CCGTGGGTGCACTGATGTG 61.327 63.158 17.98 2.24 46.37 3.21
2224 2246 2.032528 CCGTGGGTGCACTGATGT 59.967 61.111 17.98 0.00 0.00 3.06
2225 2247 2.032528 ACCGTGGGTGCACTGATG 59.967 61.111 17.98 8.69 32.98 3.07
2234 2256 2.845317 TGTAGGTGCACCGTGGGT 60.845 61.111 29.68 14.92 42.08 4.51
2235 2257 2.358247 GTGTAGGTGCACCGTGGG 60.358 66.667 29.68 0.00 42.08 4.61
2236 2258 0.816018 TTTGTGTAGGTGCACCGTGG 60.816 55.000 29.68 0.00 42.08 4.94
2237 2259 1.018148 TTTTGTGTAGGTGCACCGTG 58.982 50.000 29.68 0.00 42.08 4.94
2238 2260 1.752683 TTTTTGTGTAGGTGCACCGT 58.247 45.000 29.68 19.81 42.08 4.83
2275 2297 8.093927 TCACTTCCACAAAGTTTTCATCTTTTT 58.906 29.630 0.00 0.00 46.26 1.94
2276 2298 7.610865 TCACTTCCACAAAGTTTTCATCTTTT 58.389 30.769 0.00 0.00 46.26 2.27
2277 2299 7.169158 TCACTTCCACAAAGTTTTCATCTTT 57.831 32.000 0.00 0.00 46.26 2.52
2278 2300 6.773976 TCACTTCCACAAAGTTTTCATCTT 57.226 33.333 0.00 0.00 46.26 2.40
2279 2301 6.547141 TGATCACTTCCACAAAGTTTTCATCT 59.453 34.615 0.00 0.00 46.26 2.90
2280 2302 6.738114 TGATCACTTCCACAAAGTTTTCATC 58.262 36.000 0.00 0.00 46.26 2.92
2281 2303 6.713762 TGATCACTTCCACAAAGTTTTCAT 57.286 33.333 0.00 0.00 46.26 2.57
2282 2304 6.320926 TGATGATCACTTCCACAAAGTTTTCA 59.679 34.615 0.00 0.00 46.26 2.69
2283 2305 6.738114 TGATGATCACTTCCACAAAGTTTTC 58.262 36.000 0.00 0.00 46.26 2.29
2284 2306 6.713762 TGATGATCACTTCCACAAAGTTTT 57.286 33.333 0.00 0.00 46.26 2.43
2285 2307 6.096705 TGTTGATGATCACTTCCACAAAGTTT 59.903 34.615 0.00 0.00 46.26 2.66
2286 2308 5.593909 TGTTGATGATCACTTCCACAAAGTT 59.406 36.000 0.00 0.00 46.26 2.66
2288 2310 5.694231 TGTTGATGATCACTTCCACAAAG 57.306 39.130 0.00 0.00 41.08 2.77
2289 2311 6.462552 TTTGTTGATGATCACTTCCACAAA 57.537 33.333 18.00 18.00 40.19 2.83
2290 2312 6.040729 ACATTTGTTGATGATCACTTCCACAA 59.959 34.615 10.40 10.40 35.60 3.33
2291 2313 5.535783 ACATTTGTTGATGATCACTTCCACA 59.464 36.000 0.00 0.00 0.00 4.17
2292 2314 6.017400 ACATTTGTTGATGATCACTTCCAC 57.983 37.500 0.00 0.00 0.00 4.02
2293 2315 6.653526 AACATTTGTTGATGATCACTTCCA 57.346 33.333 0.00 0.00 36.80 3.53
2294 2316 7.965107 GTCTAACATTTGTTGATGATCACTTCC 59.035 37.037 0.00 0.00 38.90 3.46
2295 2317 8.506437 TGTCTAACATTTGTTGATGATCACTTC 58.494 33.333 0.00 0.00 38.90 3.01
2296 2318 8.394971 TGTCTAACATTTGTTGATGATCACTT 57.605 30.769 0.00 0.00 38.90 3.16
2297 2319 7.120285 CCTGTCTAACATTTGTTGATGATCACT 59.880 37.037 0.00 0.00 38.90 3.41
2298 2320 7.246311 CCTGTCTAACATTTGTTGATGATCAC 58.754 38.462 0.00 0.00 38.90 3.06
2299 2321 6.127925 GCCTGTCTAACATTTGTTGATGATCA 60.128 38.462 0.00 0.00 38.90 2.92
2300 2322 6.094603 AGCCTGTCTAACATTTGTTGATGATC 59.905 38.462 6.21 0.00 38.90 2.92
2301 2323 5.948162 AGCCTGTCTAACATTTGTTGATGAT 59.052 36.000 6.21 0.00 38.90 2.45
2302 2324 5.316167 AGCCTGTCTAACATTTGTTGATGA 58.684 37.500 6.21 0.08 38.90 2.92
2303 2325 5.633830 AGCCTGTCTAACATTTGTTGATG 57.366 39.130 6.21 0.00 38.90 3.07
2304 2326 5.565439 GCAAGCCTGTCTAACATTTGTTGAT 60.565 40.000 6.21 0.00 38.90 2.57
2305 2327 4.261572 GCAAGCCTGTCTAACATTTGTTGA 60.262 41.667 6.21 0.00 38.90 3.18
2306 2328 3.983344 GCAAGCCTGTCTAACATTTGTTG 59.017 43.478 6.21 0.00 38.90 3.33
2307 2329 3.005791 GGCAAGCCTGTCTAACATTTGTT 59.994 43.478 3.29 1.08 41.73 2.83
2308 2330 2.558359 GGCAAGCCTGTCTAACATTTGT 59.442 45.455 3.29 0.00 0.00 2.83
2309 2331 2.557924 TGGCAAGCCTGTCTAACATTTG 59.442 45.455 12.96 0.00 36.94 2.32
2310 2332 2.875296 TGGCAAGCCTGTCTAACATTT 58.125 42.857 12.96 0.00 36.94 2.32
2311 2333 2.584835 TGGCAAGCCTGTCTAACATT 57.415 45.000 12.96 0.00 36.94 2.71
2312 2334 2.224867 ACTTGGCAAGCCTGTCTAACAT 60.225 45.455 26.45 0.00 36.94 2.71
2313 2335 1.142870 ACTTGGCAAGCCTGTCTAACA 59.857 47.619 26.45 0.00 36.94 2.41
2314 2336 1.897560 ACTTGGCAAGCCTGTCTAAC 58.102 50.000 26.45 0.00 36.94 2.34
2315 2337 2.656947 AACTTGGCAAGCCTGTCTAA 57.343 45.000 26.45 0.00 36.94 2.10
2316 2338 2.656947 AAACTTGGCAAGCCTGTCTA 57.343 45.000 26.45 0.00 36.94 2.59
2317 2339 3.520623 AAACTTGGCAAGCCTGTCT 57.479 47.368 26.45 3.41 36.94 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.