Multiple sequence alignment - TraesCS1A01G437600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G437600 chr1A 100.000 3030 0 0 890 3919 587362070 587359041 0.000000e+00 5596.0
1 TraesCS1A01G437600 chr1A 100.000 525 0 0 1 525 587362959 587362435 0.000000e+00 970.0
2 TraesCS1A01G437600 chr1A 79.669 423 54 22 890 1304 425422111 425422509 3.860000e-70 276.0
3 TraesCS1A01G437600 chr1A 81.977 172 16 9 2960 3127 587627320 587627480 8.840000e-27 132.0
4 TraesCS1A01G437600 chr1D 80.780 1410 127 67 1993 3326 488102025 488103366 0.000000e+00 970.0
5 TraesCS1A01G437600 chr1D 78.914 792 111 34 2257 3019 488423228 488423992 1.640000e-133 486.0
6 TraesCS1A01G437600 chr1D 77.803 892 116 42 2257 3113 488308528 488309372 3.540000e-130 475.0
7 TraesCS1A01G437600 chr1D 78.734 790 108 31 2257 3013 488413160 488413922 1.270000e-129 473.0
8 TraesCS1A01G437600 chr1D 78.689 793 103 34 2257 3019 488417608 488418364 5.930000e-128 468.0
9 TraesCS1A01G437600 chr1D 79.745 706 94 25 2257 2935 488311467 488312150 2.130000e-127 466.0
10 TraesCS1A01G437600 chr1D 79.349 707 95 30 2257 2935 488426314 488426997 2.150000e-122 449.0
11 TraesCS1A01G437600 chr1D 77.387 911 95 60 930 1785 488100925 488101779 4.650000e-119 438.0
12 TraesCS1A01G437600 chr1D 77.848 790 117 36 2257 3014 488381746 488382509 1.670000e-118 436.0
13 TraesCS1A01G437600 chr1D 78.865 705 101 28 2257 2935 488352078 488352760 2.160000e-117 433.0
14 TraesCS1A01G437600 chr1D 79.346 673 88 27 2257 2901 488307286 488307935 3.620000e-115 425.0
15 TraesCS1A01G437600 chr1D 78.255 699 100 31 2257 2925 488411867 488412543 6.100000e-108 401.0
16 TraesCS1A01G437600 chr1D 76.279 860 129 38 2285 3114 488387555 488388369 4.750000e-104 388.0
17 TraesCS1A01G437600 chr1D 80.720 472 58 18 2257 2713 488349029 488349482 1.740000e-88 337.0
18 TraesCS1A01G437600 chr1D 81.863 408 40 15 2257 2649 488407501 488407889 2.940000e-81 313.0
19 TraesCS1A01G437600 chr1D 79.810 421 59 17 2533 2935 488402139 488402551 2.310000e-72 283.0
20 TraesCS1A01G437600 chr1D 85.878 262 24 6 270 521 488100030 488100288 2.320000e-67 267.0
21 TraesCS1A01G437600 chr1D 95.000 120 4 1 3800 3919 488104405 488104522 1.860000e-43 187.0
22 TraesCS1A01G437600 chr1D 96.739 92 2 1 3694 3784 488104249 488104340 6.780000e-33 152.0
23 TraesCS1A01G437600 chr1B 82.010 1045 95 47 2221 3213 680163431 680162428 0.000000e+00 802.0
24 TraesCS1A01G437600 chr1B 83.734 541 39 25 1250 1755 680164407 680163881 2.130000e-127 466.0
25 TraesCS1A01G437600 chr1B 76.538 878 141 39 2259 3105 680061334 680060491 1.680000e-113 420.0
26 TraesCS1A01G437600 chr1B 74.662 888 155 45 2259 3114 679944388 679943539 2.920000e-86 329.0
27 TraesCS1A01G437600 chr1B 83.193 357 26 15 1887 2218 680163810 680163463 2.960000e-76 296.0
28 TraesCS1A01G437600 chr1B 88.115 244 21 4 890 1125 680164723 680164480 2.310000e-72 283.0
29 TraesCS1A01G437600 chr1B 76.149 457 74 30 2674 3114 679923610 679923173 1.430000e-49 207.0
30 TraesCS1A01G437600 chr1B 75.328 458 87 21 2668 3113 680031296 680030853 3.090000e-46 196.0
31 TraesCS1A01G437600 chr1B 87.879 165 18 2 3757 3919 680161166 680161002 4.000000e-45 193.0
32 TraesCS1A01G437600 chr1B 91.667 60 5 0 137 196 680165278 680165219 2.510000e-12 84.2
33 TraesCS1A01G437600 chr2D 90.107 374 23 4 1382 1755 72816067 72816426 1.270000e-129 473.0
34 TraesCS1A01G437600 chr2D 89.037 374 27 4 1382 1755 254761598 254761239 5.970000e-123 451.0
35 TraesCS1A01G437600 chr2D 89.928 139 14 0 977 1115 110663279 110663141 3.110000e-41 180.0
36 TraesCS1A01G437600 chr7D 89.840 374 24 3 1382 1755 593569018 593569377 5.930000e-128 468.0
37 TraesCS1A01G437600 chr5B 89.572 374 25 5 1382 1755 553578773 553578414 2.760000e-126 462.0
38 TraesCS1A01G437600 chr6A 88.770 374 28 4 1382 1755 376696582 376696941 2.780000e-121 446.0
39 TraesCS1A01G437600 chr5D 88.770 374 28 4 1382 1755 107312819 107312460 2.780000e-121 446.0
40 TraesCS1A01G437600 chr5D 79.384 422 39 22 934 1343 45711647 45712032 1.810000e-63 254.0
41 TraesCS1A01G437600 chrUn 77.062 885 129 41 2259 3113 8929183 8928343 3.590000e-120 442.0
42 TraesCS1A01G437600 chrUn 76.610 885 133 43 2259 3113 8715794 8716634 1.680000e-113 420.0
43 TraesCS1A01G437600 chrUn 76.610 885 133 44 2259 3113 8892917 8892077 1.680000e-113 420.0
44 TraesCS1A01G437600 chrUn 75.968 878 144 46 2259 3105 9096010 9096851 1.320000e-104 390.0
45 TraesCS1A01G437600 chrUn 76.347 668 104 30 2259 2898 8981940 8981299 3.800000e-80 309.0
46 TraesCS1A01G437600 chrUn 74.124 885 161 45 2259 3112 8967459 8966612 1.770000e-78 303.0
47 TraesCS1A01G437600 chrUn 75.749 668 108 30 2259 2898 8658960 8659601 1.780000e-73 287.0
48 TraesCS1A01G437600 chrUn 80.789 380 30 26 2959 3320 8869535 8869181 1.400000e-64 257.0
49 TraesCS1A01G437600 chrUn 75.536 466 82 24 2664 3114 369929605 369929157 2.390000e-47 200.0
50 TraesCS1A01G437600 chrUn 77.742 310 51 14 2810 3114 329174987 329175283 1.450000e-39 174.0
51 TraesCS1A01G437600 chr2A 90.850 306 20 2 1382 1687 82804418 82804121 1.700000e-108 403.0
52 TraesCS1A01G437600 chr6B 90.196 306 22 1 1382 1687 103260685 103260982 3.670000e-105 392.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G437600 chr1A 587359041 587362959 3918 True 3283.000000 5596 100.000000 1 3919 2 chr1A.!!$R1 3918
1 TraesCS1A01G437600 chr1D 488423228 488426997 3769 False 467.500000 486 79.131500 2257 3019 2 chr1D.!!$F8 762
2 TraesCS1A01G437600 chr1D 488307286 488312150 4864 False 455.333333 475 78.964667 2257 3113 3 chr1D.!!$F5 856
3 TraesCS1A01G437600 chr1D 488381746 488382509 763 False 436.000000 436 77.848000 2257 3014 1 chr1D.!!$F1 757
4 TraesCS1A01G437600 chr1D 488407501 488418364 10863 False 413.750000 473 79.385250 2257 3019 4 chr1D.!!$F7 762
5 TraesCS1A01G437600 chr1D 488100030 488104522 4492 False 402.800000 970 87.156800 270 3919 5 chr1D.!!$F4 3649
6 TraesCS1A01G437600 chr1D 488387555 488388369 814 False 388.000000 388 76.279000 2285 3114 1 chr1D.!!$F2 829
7 TraesCS1A01G437600 chr1D 488349029 488352760 3731 False 385.000000 433 79.792500 2257 2935 2 chr1D.!!$F6 678
8 TraesCS1A01G437600 chr1B 680060491 680061334 843 True 420.000000 420 76.538000 2259 3105 1 chr1B.!!$R4 846
9 TraesCS1A01G437600 chr1B 680161002 680165278 4276 True 354.033333 802 86.099667 137 3919 6 chr1B.!!$R5 3782
10 TraesCS1A01G437600 chr1B 679943539 679944388 849 True 329.000000 329 74.662000 2259 3114 1 chr1B.!!$R2 855
11 TraesCS1A01G437600 chrUn 8928343 8929183 840 True 442.000000 442 77.062000 2259 3113 1 chrUn.!!$R3 854
12 TraesCS1A01G437600 chrUn 8715794 8716634 840 False 420.000000 420 76.610000 2259 3113 1 chrUn.!!$F2 854
13 TraesCS1A01G437600 chrUn 8892077 8892917 840 True 420.000000 420 76.610000 2259 3113 1 chrUn.!!$R2 854
14 TraesCS1A01G437600 chrUn 9096010 9096851 841 False 390.000000 390 75.968000 2259 3105 1 chrUn.!!$F3 846
15 TraesCS1A01G437600 chrUn 8981299 8981940 641 True 309.000000 309 76.347000 2259 2898 1 chrUn.!!$R5 639
16 TraesCS1A01G437600 chrUn 8966612 8967459 847 True 303.000000 303 74.124000 2259 3112 1 chrUn.!!$R4 853
17 TraesCS1A01G437600 chrUn 8658960 8659601 641 False 287.000000 287 75.749000 2259 2898 1 chrUn.!!$F1 639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
421 458 0.035056 AGGAATCCGTTTGCTCCCTG 60.035 55.0 0.0 0.00 28.35 4.45 F
1201 1513 0.034198 TGGTTTGATTCTGCGTCCGA 59.966 50.0 0.0 0.00 0.00 4.55 F
1769 2175 0.109272 CTCTGTTGCTCGCCGAGTTA 60.109 55.0 16.5 2.41 31.39 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2030 2516 0.179113 CCAACCAACCAACAGTGCAC 60.179 55.0 9.40 9.4 0.00 4.57 R
2485 4246 0.035317 TCAGCAACAGGAGCGTTCAT 59.965 50.0 0.53 0.0 37.01 2.57 R
3338 12206 0.037326 TAGAAACAGCGCTCTGGGTG 60.037 55.0 7.13 0.0 44.54 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.507280 CAAATTTGCTAACCATAGTTGTAGATG 57.493 33.333 5.01 0.00 36.68 2.90
27 28 6.677781 TTTGCTAACCATAGTTGTAGATGC 57.322 37.500 0.00 0.00 36.68 3.91
28 29 5.614324 TGCTAACCATAGTTGTAGATGCT 57.386 39.130 0.00 0.00 36.68 3.79
29 30 5.601662 TGCTAACCATAGTTGTAGATGCTC 58.398 41.667 0.00 0.00 36.68 4.26
30 31 4.681942 GCTAACCATAGTTGTAGATGCTCG 59.318 45.833 0.00 0.00 36.68 5.03
31 32 3.735237 ACCATAGTTGTAGATGCTCGG 57.265 47.619 0.00 0.00 0.00 4.63
32 33 3.296854 ACCATAGTTGTAGATGCTCGGA 58.703 45.455 0.00 0.00 0.00 4.55
33 34 3.068307 ACCATAGTTGTAGATGCTCGGAC 59.932 47.826 0.00 0.00 0.00 4.79
34 35 3.553096 CCATAGTTGTAGATGCTCGGACC 60.553 52.174 0.00 0.00 0.00 4.46
35 36 0.456221 AGTTGTAGATGCTCGGACCG 59.544 55.000 7.84 7.84 0.00 4.79
36 37 0.527817 GTTGTAGATGCTCGGACCGG 60.528 60.000 15.25 0.00 0.00 5.28
37 38 0.968901 TTGTAGATGCTCGGACCGGT 60.969 55.000 6.92 6.92 0.00 5.28
38 39 1.065928 GTAGATGCTCGGACCGGTG 59.934 63.158 14.63 8.71 0.00 4.94
39 40 1.077285 TAGATGCTCGGACCGGTGA 60.077 57.895 14.63 2.24 0.00 4.02
40 41 1.101635 TAGATGCTCGGACCGGTGAG 61.102 60.000 14.63 15.41 35.30 3.51
41 42 2.680352 ATGCTCGGACCGGTGAGT 60.680 61.111 14.63 0.00 34.67 3.41
42 43 1.379443 ATGCTCGGACCGGTGAGTA 60.379 57.895 14.63 14.07 34.67 2.59
43 44 0.968901 ATGCTCGGACCGGTGAGTAA 60.969 55.000 14.63 6.87 34.67 2.24
44 45 1.180456 TGCTCGGACCGGTGAGTAAA 61.180 55.000 14.63 0.83 34.67 2.01
45 46 0.037975 GCTCGGACCGGTGAGTAAAA 60.038 55.000 14.63 0.00 34.67 1.52
46 47 1.606224 GCTCGGACCGGTGAGTAAAAA 60.606 52.381 14.63 0.00 34.67 1.94
87 88 8.567285 AAATATAAAGCCTAGTATGTGATGCC 57.433 34.615 0.00 0.00 0.00 4.40
88 89 2.938956 AAGCCTAGTATGTGATGCCC 57.061 50.000 0.00 0.00 0.00 5.36
89 90 2.109229 AGCCTAGTATGTGATGCCCT 57.891 50.000 0.00 0.00 0.00 5.19
90 91 3.260269 AGCCTAGTATGTGATGCCCTA 57.740 47.619 0.00 0.00 0.00 3.53
91 92 3.587498 AGCCTAGTATGTGATGCCCTAA 58.413 45.455 0.00 0.00 0.00 2.69
92 93 3.973973 AGCCTAGTATGTGATGCCCTAAA 59.026 43.478 0.00 0.00 0.00 1.85
93 94 4.412199 AGCCTAGTATGTGATGCCCTAAAA 59.588 41.667 0.00 0.00 0.00 1.52
94 95 5.104109 AGCCTAGTATGTGATGCCCTAAAAA 60.104 40.000 0.00 0.00 0.00 1.94
121 122 9.543783 AAGTTGATTAAAACGACTAGAGAAACT 57.456 29.630 0.00 0.00 35.13 2.66
122 123 9.194271 AGTTGATTAAAACGACTAGAGAAACTC 57.806 33.333 0.00 0.00 35.13 3.01
123 124 8.975439 GTTGATTAAAACGACTAGAGAAACTCA 58.025 33.333 0.00 0.00 32.06 3.41
124 125 8.744008 TGATTAAAACGACTAGAGAAACTCAG 57.256 34.615 0.00 0.00 32.06 3.35
125 126 8.573885 TGATTAAAACGACTAGAGAAACTCAGA 58.426 33.333 0.00 0.00 32.06 3.27
126 127 8.973835 ATTAAAACGACTAGAGAAACTCAGAG 57.026 34.615 0.00 0.00 32.06 3.35
127 128 4.428615 AACGACTAGAGAAACTCAGAGC 57.571 45.455 0.00 0.00 32.06 4.09
128 129 3.413327 ACGACTAGAGAAACTCAGAGCA 58.587 45.455 0.00 0.00 32.06 4.26
129 130 3.189702 ACGACTAGAGAAACTCAGAGCAC 59.810 47.826 0.00 0.00 32.06 4.40
130 131 3.189495 CGACTAGAGAAACTCAGAGCACA 59.811 47.826 0.00 0.00 32.06 4.57
131 132 4.320567 CGACTAGAGAAACTCAGAGCACAA 60.321 45.833 0.00 0.00 32.06 3.33
132 133 5.533482 GACTAGAGAAACTCAGAGCACAAA 58.467 41.667 0.00 0.00 32.06 2.83
133 134 5.537188 ACTAGAGAAACTCAGAGCACAAAG 58.463 41.667 0.00 0.00 32.06 2.77
134 135 3.137533 AGAGAAACTCAGAGCACAAAGC 58.862 45.455 0.00 0.00 36.82 3.51
135 136 3.432749 AGAGAAACTCAGAGCACAAAGCA 60.433 43.478 0.00 0.00 38.24 3.91
220 251 4.315122 CGGAGCGAGCGAGCGTAT 62.315 66.667 0.00 0.00 43.00 3.06
227 258 1.136884 GCGAGCGAGCGTATAAATGTG 60.137 52.381 0.00 0.00 0.00 3.21
228 259 2.117137 CGAGCGAGCGTATAAATGTGT 58.883 47.619 0.00 0.00 0.00 3.72
229 260 2.534349 CGAGCGAGCGTATAAATGTGTT 59.466 45.455 0.00 0.00 0.00 3.32
230 261 3.599339 CGAGCGAGCGTATAAATGTGTTG 60.599 47.826 0.00 0.00 0.00 3.33
238 269 7.375808 CGAGCGTATAAATGTGTTGCATTAAAT 59.624 33.333 0.00 0.00 46.29 1.40
249 280 9.687210 ATGTGTTGCATTAAATAAGCAGATATG 57.313 29.630 0.00 0.00 39.72 1.78
250 281 7.648908 TGTGTTGCATTAAATAAGCAGATATGC 59.351 33.333 3.54 3.54 39.72 3.14
251 282 7.648908 GTGTTGCATTAAATAAGCAGATATGCA 59.351 33.333 15.82 0.00 43.41 3.96
252 283 8.361889 TGTTGCATTAAATAAGCAGATATGCAT 58.638 29.630 15.82 4.99 44.17 3.96
253 284 9.844790 GTTGCATTAAATAAGCAGATATGCATA 57.155 29.630 15.82 9.27 44.17 3.14
338 369 4.563580 GCGAATAATGCTGGGGATAGAAGA 60.564 45.833 0.00 0.00 0.00 2.87
339 374 5.174395 CGAATAATGCTGGGGATAGAAGAG 58.826 45.833 0.00 0.00 0.00 2.85
351 386 4.163268 GGGATAGAAGAGGAATATCTGGGC 59.837 50.000 0.00 0.00 0.00 5.36
354 389 3.933886 AGAAGAGGAATATCTGGGCAGA 58.066 45.455 0.00 0.00 42.37 4.26
413 450 1.674322 CGCCCACAGGAATCCGTTT 60.674 57.895 0.00 0.00 33.47 3.60
421 458 0.035056 AGGAATCCGTTTGCTCCCTG 60.035 55.000 0.00 0.00 28.35 4.45
446 483 2.203788 TGTGCCTTCGTCTCCCCT 60.204 61.111 0.00 0.00 0.00 4.79
471 508 3.979497 CCCCGGTTTTGGCCTCCT 61.979 66.667 3.32 0.00 0.00 3.69
472 509 2.361230 CCCGGTTTTGGCCTCCTC 60.361 66.667 3.32 0.00 0.00 3.71
475 512 2.907179 CGGTTTTGGCCTCCTCCCT 61.907 63.158 3.32 0.00 0.00 4.20
476 513 1.000771 GGTTTTGGCCTCCTCCCTC 60.001 63.158 3.32 0.00 0.00 4.30
477 514 1.000771 GTTTTGGCCTCCTCCCTCC 60.001 63.158 3.32 0.00 0.00 4.30
500 543 0.311165 CGCCGTCTTCATACGAGGAT 59.689 55.000 0.00 0.00 45.68 3.24
508 552 4.221703 GTCTTCATACGAGGATGGATGGAT 59.778 45.833 0.00 0.00 28.86 3.41
521 565 0.323725 GATGGATGCCCCGCCAATAT 60.324 55.000 0.00 0.00 37.78 1.28
522 566 0.998928 ATGGATGCCCCGCCAATATA 59.001 50.000 0.00 0.00 37.78 0.86
523 567 0.998928 TGGATGCCCCGCCAATATAT 59.001 50.000 0.00 0.00 37.93 0.86
524 568 2.200955 TGGATGCCCCGCCAATATATA 58.799 47.619 0.00 0.00 37.93 0.86
919 1225 1.261238 CCGCCAGAAGAAGTCCTCCT 61.261 60.000 0.00 0.00 0.00 3.69
1102 1414 0.468214 CCTCTCCGCCATCCTCAGTA 60.468 60.000 0.00 0.00 0.00 2.74
1106 1418 1.592669 CCGCCATCCTCAGTAAGCG 60.593 63.158 0.00 0.00 42.99 4.68
1107 1419 2.240500 CGCCATCCTCAGTAAGCGC 61.241 63.158 0.00 0.00 36.89 5.92
1126 1438 4.038804 CCCTCCCCTCCCCTCCAA 62.039 72.222 0.00 0.00 0.00 3.53
1128 1440 2.456840 CTCCCCTCCCCTCCAACT 59.543 66.667 0.00 0.00 0.00 3.16
1129 1441 1.690985 CTCCCCTCCCCTCCAACTC 60.691 68.421 0.00 0.00 0.00 3.01
1130 1442 2.692741 CCCCTCCCCTCCAACTCC 60.693 72.222 0.00 0.00 0.00 3.85
1131 1443 2.124996 CCCTCCCCTCCAACTCCA 59.875 66.667 0.00 0.00 0.00 3.86
1132 1444 1.541368 CCCTCCCCTCCAACTCCAA 60.541 63.158 0.00 0.00 0.00 3.53
1133 1445 0.921256 CCCTCCCCTCCAACTCCAAT 60.921 60.000 0.00 0.00 0.00 3.16
1134 1446 1.002857 CCTCCCCTCCAACTCCAATT 58.997 55.000 0.00 0.00 0.00 2.32
1135 1447 1.341383 CCTCCCCTCCAACTCCAATTG 60.341 57.143 0.00 0.00 0.00 2.32
1136 1448 0.039618 TCCCCTCCAACTCCAATTGC 59.960 55.000 0.00 0.00 0.00 3.56
1137 1449 0.972471 CCCCTCCAACTCCAATTGCC 60.972 60.000 0.00 0.00 0.00 4.52
1138 1450 1.315257 CCCTCCAACTCCAATTGCCG 61.315 60.000 0.00 0.00 0.00 5.69
1139 1451 0.609131 CCTCCAACTCCAATTGCCGT 60.609 55.000 0.00 0.00 0.00 5.68
1140 1452 0.804989 CTCCAACTCCAATTGCCGTC 59.195 55.000 0.00 0.00 0.00 4.79
1141 1453 0.953471 TCCAACTCCAATTGCCGTCG 60.953 55.000 0.00 0.00 0.00 5.12
1142 1454 1.501741 CAACTCCAATTGCCGTCGG 59.498 57.895 6.99 6.99 0.00 4.79
1143 1455 1.072505 AACTCCAATTGCCGTCGGT 59.927 52.632 13.94 0.00 0.00 4.69
1144 1456 0.953960 AACTCCAATTGCCGTCGGTC 60.954 55.000 13.94 5.94 0.00 4.79
1145 1457 2.433491 TCCAATTGCCGTCGGTCG 60.433 61.111 13.94 0.00 39.52 4.79
1154 1466 3.207669 CGTCGGTCGGGTCCTAGG 61.208 72.222 0.82 0.82 35.71 3.02
1170 1482 2.169978 CCTAGGTGGTAGGTAGGTTTGC 59.830 54.545 0.00 0.00 43.39 3.68
1171 1483 0.989602 AGGTGGTAGGTAGGTTTGCC 59.010 55.000 0.00 0.00 0.00 4.52
1172 1484 0.392060 GGTGGTAGGTAGGTTTGCCG 60.392 60.000 0.00 0.00 40.50 5.69
1173 1485 0.322648 GTGGTAGGTAGGTTTGCCGT 59.677 55.000 0.00 0.00 40.50 5.68
1177 1489 0.899720 TAGGTAGGTTTGCCGTCCAG 59.100 55.000 0.00 0.00 40.50 3.86
1178 1490 0.834687 AGGTAGGTTTGCCGTCCAGA 60.835 55.000 0.00 0.00 40.50 3.86
1179 1491 0.391263 GGTAGGTTTGCCGTCCAGAG 60.391 60.000 0.00 0.00 40.50 3.35
1180 1492 0.320697 GTAGGTTTGCCGTCCAGAGT 59.679 55.000 0.00 0.00 40.50 3.24
1181 1493 1.053424 TAGGTTTGCCGTCCAGAGTT 58.947 50.000 0.00 0.00 40.50 3.01
1182 1494 0.182775 AGGTTTGCCGTCCAGAGTTT 59.817 50.000 0.00 0.00 40.50 2.66
1183 1495 0.310854 GGTTTGCCGTCCAGAGTTTG 59.689 55.000 0.00 0.00 0.00 2.93
1184 1496 5.930598 TAGGTTTGCCGTCCAGAGTTTGG 62.931 52.174 0.00 0.00 43.67 3.28
1195 1507 3.905784 CCAGAGTTTGGTTTGATTCTGC 58.094 45.455 0.00 0.00 42.41 4.26
1196 1508 3.558505 CAGAGTTTGGTTTGATTCTGCG 58.441 45.455 0.00 0.00 0.00 5.18
1197 1509 3.003689 CAGAGTTTGGTTTGATTCTGCGT 59.996 43.478 0.00 0.00 0.00 5.24
1198 1510 3.251004 AGAGTTTGGTTTGATTCTGCGTC 59.749 43.478 0.00 0.00 0.00 5.19
1199 1511 2.293399 AGTTTGGTTTGATTCTGCGTCC 59.707 45.455 0.00 0.00 0.00 4.79
1200 1512 0.871722 TTGGTTTGATTCTGCGTCCG 59.128 50.000 0.00 0.00 0.00 4.79
1201 1513 0.034198 TGGTTTGATTCTGCGTCCGA 59.966 50.000 0.00 0.00 0.00 4.55
1202 1514 0.442699 GGTTTGATTCTGCGTCCGAC 59.557 55.000 0.00 0.00 0.00 4.79
1221 1547 3.888424 TCGATTCGAGTCCCAGGTA 57.112 52.632 4.29 0.00 0.00 3.08
1228 1554 1.134907 TCGAGTCCCAGGTAAATTCGC 60.135 52.381 0.00 0.00 0.00 4.70
1231 1557 1.209747 AGTCCCAGGTAAATTCGCTCC 59.790 52.381 0.00 0.00 0.00 4.70
1234 1560 1.436983 CCAGGTAAATTCGCTCCGGC 61.437 60.000 0.00 0.00 0.00 6.13
1235 1561 1.153229 AGGTAAATTCGCTCCGGCC 60.153 57.895 0.00 0.00 34.44 6.13
1236 1562 2.531376 GGTAAATTCGCTCCGGCCG 61.531 63.158 21.04 21.04 34.44 6.13
1237 1563 2.202960 TAAATTCGCTCCGGCCGG 60.203 61.111 39.13 39.13 34.44 6.13
1238 1564 2.723237 TAAATTCGCTCCGGCCGGA 61.723 57.895 42.62 42.62 42.90 5.14
1239 1565 2.035237 TAAATTCGCTCCGGCCGGAT 62.035 55.000 45.15 30.74 44.24 4.18
1240 1566 4.609018 ATTCGCTCCGGCCGGATG 62.609 66.667 45.15 37.06 44.24 3.51
1244 1570 4.688966 GCTCCGGCCGGATGGATC 62.689 72.222 45.15 26.61 44.24 3.36
1245 1571 4.363990 CTCCGGCCGGATGGATCG 62.364 72.222 45.15 29.09 44.24 3.69
1258 1584 4.695231 GATCGCGCATGGCATGGC 62.695 66.667 27.48 24.88 43.84 4.40
1304 1630 3.244215 TGCTTAGGATTTAGGAGGATGCG 60.244 47.826 0.00 0.00 0.00 4.73
1337 1663 9.868277 GGAGAATGATGATTAGACTATTACAGG 57.132 37.037 0.00 0.00 0.00 4.00
1343 1669 7.785028 TGATGATTAGACTATTACAGGGTCAGT 59.215 37.037 0.00 0.00 32.98 3.41
1344 1670 7.584122 TGATTAGACTATTACAGGGTCAGTC 57.416 40.000 0.00 0.00 36.67 3.51
1345 1671 7.355101 TGATTAGACTATTACAGGGTCAGTCT 58.645 38.462 7.61 7.61 45.84 3.24
1349 1675 2.770164 ATTACAGGGTCAGTCTGCAC 57.230 50.000 0.00 0.00 35.78 4.57
1351 1677 2.154798 TACAGGGTCAGTCTGCACGC 62.155 60.000 0.00 3.53 35.78 5.34
1353 1679 2.046892 GGGTCAGTCTGCACGCAT 60.047 61.111 11.81 0.00 0.00 4.73
1391 1736 1.537889 TCCCATCCACCCGTGACTT 60.538 57.895 0.00 0.00 0.00 3.01
1392 1737 1.377202 CCCATCCACCCGTGACTTG 60.377 63.158 0.00 0.00 0.00 3.16
1394 1739 0.955428 CCATCCACCCGTGACTTGTG 60.955 60.000 0.00 0.00 0.00 3.33
1400 1749 2.562912 CCGTGACTTGTGCATGCC 59.437 61.111 16.68 7.25 0.00 4.40
1403 1752 1.902918 GTGACTTGTGCATGCCCCA 60.903 57.895 16.68 9.27 0.00 4.96
1529 1880 2.111878 GCACCACCACTGCTCTGT 59.888 61.111 0.00 0.00 0.00 3.41
1538 1889 1.674221 CCACTGCTCTGTTCTACCAGC 60.674 57.143 0.00 0.00 32.32 4.85
1556 1913 9.542462 TCTACCAGCATTAATAATAAGTGTGTC 57.458 33.333 0.00 0.00 0.00 3.67
1592 1949 0.396811 AACCTGACAGTAGCCACCAC 59.603 55.000 0.93 0.00 0.00 4.16
1621 1978 2.553086 CAACTGTGCTTGCCATTTTGT 58.447 42.857 0.00 0.00 0.00 2.83
1622 1979 2.228138 ACTGTGCTTGCCATTTTGTG 57.772 45.000 0.00 0.00 0.00 3.33
1624 1981 2.129607 CTGTGCTTGCCATTTTGTGTC 58.870 47.619 0.00 0.00 0.00 3.67
1653 2039 6.422333 TCATCTGTCCCATAAGTTTGCATTA 58.578 36.000 0.00 0.00 0.00 1.90
1674 2060 3.257469 CTCTGCATAGAGCTTGGTTCA 57.743 47.619 0.00 0.00 43.62 3.18
1681 2067 5.098211 GCATAGAGCTTGGTTCAAAACATC 58.902 41.667 0.00 0.00 41.15 3.06
1695 2096 6.795098 TCAAAACATCGCATTACTAGTGTT 57.205 33.333 5.39 0.00 0.00 3.32
1701 2102 4.012319 TCGCATTACTAGTGTTCGAGTC 57.988 45.455 5.39 0.00 32.23 3.36
1709 2110 2.240493 AGTGTTCGAGTCAGTTTGGG 57.760 50.000 0.00 0.00 0.00 4.12
1755 2160 3.181475 ACGATGAGTTTGTGTCACTCTGT 60.181 43.478 4.27 0.00 41.25 3.41
1759 2165 2.939103 GAGTTTGTGTCACTCTGTTGCT 59.061 45.455 4.27 0.00 38.14 3.91
1760 2166 2.939103 AGTTTGTGTCACTCTGTTGCTC 59.061 45.455 4.27 0.00 0.00 4.26
1764 2170 2.049156 TCACTCTGTTGCTCGCCG 60.049 61.111 0.00 0.00 0.00 6.46
1769 2175 0.109272 CTCTGTTGCTCGCCGAGTTA 60.109 55.000 16.50 2.41 31.39 2.24
1796 2202 2.044123 GCATTGCTGCTACCTTACCT 57.956 50.000 0.16 0.00 45.32 3.08
1797 2203 1.672881 GCATTGCTGCTACCTTACCTG 59.327 52.381 0.16 0.00 45.32 4.00
1800 2206 1.153147 GCTGCTACCTTACCTGGCC 60.153 63.158 0.00 0.00 0.00 5.36
1801 2207 1.527370 CTGCTACCTTACCTGGCCC 59.473 63.158 0.00 0.00 0.00 5.80
1806 2212 1.697982 CTACCTTACCTGGCCCATACC 59.302 57.143 0.00 0.00 0.00 2.73
1816 2222 1.202758 TGGCCCATACCATTAGCTTCG 60.203 52.381 0.00 0.00 33.75 3.79
1826 2275 4.526970 ACCATTAGCTTCGGTTCATCATT 58.473 39.130 0.00 0.00 0.00 2.57
1827 2276 4.336433 ACCATTAGCTTCGGTTCATCATTG 59.664 41.667 0.00 0.00 0.00 2.82
1828 2277 4.285292 CATTAGCTTCGGTTCATCATTGC 58.715 43.478 0.00 0.00 0.00 3.56
1830 2279 1.098050 GCTTCGGTTCATCATTGCCT 58.902 50.000 0.00 0.00 0.00 4.75
1831 2280 1.474077 GCTTCGGTTCATCATTGCCTT 59.526 47.619 0.00 0.00 0.00 4.35
1832 2281 2.094545 GCTTCGGTTCATCATTGCCTTT 60.095 45.455 0.00 0.00 0.00 3.11
1833 2282 3.614870 GCTTCGGTTCATCATTGCCTTTT 60.615 43.478 0.00 0.00 0.00 2.27
1834 2283 4.559153 CTTCGGTTCATCATTGCCTTTTT 58.441 39.130 0.00 0.00 0.00 1.94
1854 2303 5.900865 TTTTTGCTATCTGTGATGCATCA 57.099 34.783 25.42 25.42 35.27 3.07
1855 2304 6.459670 TTTTTGCTATCTGTGATGCATCAT 57.540 33.333 30.89 18.01 39.30 2.45
1856 2305 5.684550 TTTGCTATCTGTGATGCATCATC 57.315 39.130 30.89 23.01 40.88 2.92
1857 2306 4.345859 TGCTATCTGTGATGCATCATCA 57.654 40.909 30.89 25.74 46.84 3.07
1878 2327 7.765819 TCATCAACTGAATCTGATATTCGTGTT 59.234 33.333 0.00 0.00 31.04 3.32
1879 2328 7.525688 TCAACTGAATCTGATATTCGTGTTC 57.474 36.000 0.00 0.00 30.72 3.18
1881 2330 7.819415 TCAACTGAATCTGATATTCGTGTTCTT 59.181 33.333 0.00 0.00 30.72 2.52
1882 2331 7.763172 ACTGAATCTGATATTCGTGTTCTTC 57.237 36.000 0.00 0.00 0.00 2.87
1885 2334 7.323420 TGAATCTGATATTCGTGTTCTTCTGT 58.677 34.615 0.00 0.00 0.00 3.41
1887 2336 6.951256 TCTGATATTCGTGTTCTTCTGTTG 57.049 37.500 0.00 0.00 0.00 3.33
1888 2337 6.455647 TCTGATATTCGTGTTCTTCTGTTGT 58.544 36.000 0.00 0.00 0.00 3.32
1890 2339 7.116376 TCTGATATTCGTGTTCTTCTGTTGTTC 59.884 37.037 0.00 0.00 0.00 3.18
1891 2340 6.929049 TGATATTCGTGTTCTTCTGTTGTTCT 59.071 34.615 0.00 0.00 0.00 3.01
1892 2341 7.441157 TGATATTCGTGTTCTTCTGTTGTTCTT 59.559 33.333 0.00 0.00 0.00 2.52
1893 2342 4.857871 TCGTGTTCTTCTGTTGTTCTTG 57.142 40.909 0.00 0.00 0.00 3.02
1932 2396 2.237392 AGATGTTTCTACCTCCAGCCAC 59.763 50.000 0.00 0.00 0.00 5.01
1935 2399 0.320374 TTTCTACCTCCAGCCACGTG 59.680 55.000 9.08 9.08 0.00 4.49
1950 2418 4.506288 AGCCACGTGTTTTAAAAGCAATTC 59.494 37.500 15.65 0.00 0.00 2.17
1953 2421 5.174943 CCACGTGTTTTAAAAGCAATTCCTC 59.825 40.000 15.65 0.00 0.00 3.71
1954 2422 5.746245 CACGTGTTTTAAAAGCAATTCCTCA 59.254 36.000 7.58 0.00 0.00 3.86
1963 2431 3.083122 AGCAATTCCTCAAGTCATGCT 57.917 42.857 0.00 0.00 37.80 3.79
1984 2457 7.681259 TGCTCCTGCATTATATGTATATCCT 57.319 36.000 0.00 0.00 45.31 3.24
1985 2458 8.094284 TGCTCCTGCATTATATGTATATCCTT 57.906 34.615 0.00 0.00 45.31 3.36
2041 2527 2.174363 TCTGATCAGTGCACTGTTGG 57.826 50.000 38.41 27.04 44.12 3.77
2042 2528 1.417517 TCTGATCAGTGCACTGTTGGT 59.582 47.619 38.41 25.32 44.12 3.67
2043 2529 2.158769 TCTGATCAGTGCACTGTTGGTT 60.159 45.455 38.41 22.44 44.12 3.67
2044 2530 1.948834 TGATCAGTGCACTGTTGGTTG 59.051 47.619 38.41 18.55 44.12 3.77
2124 2610 1.493311 CTTCAAGCGCAACGACTCC 59.507 57.895 11.47 0.00 0.00 3.85
2129 2615 4.681978 GCGCAACGACTCCAGGGT 62.682 66.667 0.30 0.00 0.00 4.34
2200 2688 4.608951 GGTAAGCTCACCTTCTACATACG 58.391 47.826 0.00 0.00 35.55 3.06
2214 2702 4.868171 TCTACATACGTTTCCTGTGCATTC 59.132 41.667 0.00 0.00 0.00 2.67
2218 2706 5.048083 ACATACGTTTCCTGTGCATTCATTT 60.048 36.000 0.00 0.00 0.00 2.32
2219 2707 3.900941 ACGTTTCCTGTGCATTCATTTC 58.099 40.909 0.00 0.00 0.00 2.17
2221 2709 4.759693 ACGTTTCCTGTGCATTCATTTCTA 59.240 37.500 0.00 0.00 0.00 2.10
2223 2711 5.740569 CGTTTCCTGTGCATTCATTTCTATG 59.259 40.000 0.00 0.00 0.00 2.23
2239 2755 2.029020 TCTATGACTGTTGCTGAACGCT 60.029 45.455 0.00 0.00 40.11 5.07
2251 2767 0.380378 TGAACGCTTTTGTGTGCTCC 59.620 50.000 0.00 0.00 43.14 4.70
2290 2806 1.612950 TGTTTACCCAAGCATGCTGTG 59.387 47.619 23.48 19.83 0.00 3.66
2379 4138 1.001158 GTCGTATGACTGGGCTAGAGC 60.001 57.143 4.33 0.00 42.08 4.09
2396 4155 1.153269 GCTAACTCAGAGGCTGGCC 60.153 63.158 3.00 3.00 31.51 5.36
2399 4158 0.338467 TAACTCAGAGGCTGGCCCTA 59.662 55.000 8.11 0.00 46.60 3.53
2400 4159 0.547712 AACTCAGAGGCTGGCCCTAA 60.548 55.000 8.11 0.00 46.60 2.69
2401 4160 1.268283 ACTCAGAGGCTGGCCCTAAC 61.268 60.000 8.11 0.00 46.60 2.34
2412 4171 2.106683 GCCCTAACAACGCGCTCAT 61.107 57.895 5.73 0.00 0.00 2.90
2432 4191 6.630413 GCTCATCACCTCAGATGGTAAGTTAA 60.630 42.308 4.33 0.00 44.30 2.01
2433 4192 7.437713 TCATCACCTCAGATGGTAAGTTAAT 57.562 36.000 4.33 0.00 44.30 1.40
2434 4193 8.547481 TCATCACCTCAGATGGTAAGTTAATA 57.453 34.615 4.33 0.00 44.30 0.98
2435 4194 8.421784 TCATCACCTCAGATGGTAAGTTAATAC 58.578 37.037 4.33 0.00 44.30 1.89
2436 4195 7.973048 TCACCTCAGATGGTAAGTTAATACT 57.027 36.000 0.00 0.00 38.45 2.12
2437 4196 9.656323 ATCACCTCAGATGGTAAGTTAATACTA 57.344 33.333 0.00 0.00 38.45 1.82
2455 4214 6.963083 ATACTAGTAGTGTCATTCCCTGTC 57.037 41.667 13.29 0.00 0.00 3.51
2464 4223 3.711704 TGTCATTCCCTGTCCCTCTATTC 59.288 47.826 0.00 0.00 0.00 1.75
2479 4240 8.275758 GTCCCTCTATTCCCTTCTTTTCTTTAT 58.724 37.037 0.00 0.00 0.00 1.40
2480 4241 8.846804 TCCCTCTATTCCCTTCTTTTCTTTATT 58.153 33.333 0.00 0.00 0.00 1.40
2481 4242 9.480861 CCCTCTATTCCCTTCTTTTCTTTATTT 57.519 33.333 0.00 0.00 0.00 1.40
2490 4251 9.556030 CCCTTCTTTTCTTTATTTACGATGAAC 57.444 33.333 0.00 0.00 0.00 3.18
2508 4273 0.250467 ACGCTCCTGTTGCTGACAAT 60.250 50.000 0.00 0.00 38.27 2.71
2515 4280 5.534207 TCCTGTTGCTGACAATTCATTTT 57.466 34.783 0.00 0.00 38.27 1.82
2519 4284 6.073980 CCTGTTGCTGACAATTCATTTTCTTG 60.074 38.462 0.00 0.00 38.27 3.02
2526 4291 6.660486 GACAATTCATTTTCTTGTCGTGAC 57.340 37.500 0.00 0.00 39.34 3.67
2530 4310 2.875933 TCATTTTCTTGTCGTGACCACC 59.124 45.455 0.00 0.00 0.00 4.61
2531 4311 1.292061 TTTTCTTGTCGTGACCACCG 58.708 50.000 0.00 0.00 0.00 4.94
2564 4344 5.723237 GTTTGGCAAAGATAAACACAAACG 58.277 37.500 13.94 0.00 37.52 3.60
2566 4346 2.729360 GGCAAAGATAAACACAAACGCC 59.271 45.455 0.00 0.00 0.00 5.68
2641 4421 3.782244 CACTGCTTCACGGCGCTC 61.782 66.667 6.90 0.00 34.52 5.03
2659 7516 2.281761 ACCCCTTGCGCTGTTCTG 60.282 61.111 9.73 0.00 0.00 3.02
2684 7541 0.257905 GATGGGACCCCCTTACAACC 59.742 60.000 8.45 0.00 45.70 3.77
2687 7544 1.381463 GGACCCCCTTACAACCACC 59.619 63.158 0.00 0.00 0.00 4.61
2707 7564 4.840005 GCTGGTAGGGACTGCGCC 62.840 72.222 4.18 0.00 43.77 6.53
2748 10197 1.666553 CAAACGCAGCCGGTGAGTA 60.667 57.895 7.41 0.00 38.40 2.59
2749 10198 1.374252 AAACGCAGCCGGTGAGTAG 60.374 57.895 7.41 0.00 38.40 2.57
2750 10199 2.095978 AAACGCAGCCGGTGAGTAGT 62.096 55.000 7.41 0.00 38.40 2.73
2763 10212 3.056465 GGTGAGTAGTGTTCTCTTCCCAG 60.056 52.174 0.00 0.00 33.59 4.45
2772 10221 3.013219 GTTCTCTTCCCAGCCTTGAATC 58.987 50.000 0.00 0.00 0.00 2.52
2774 10223 1.563410 CTCTTCCCAGCCTTGAATCCT 59.437 52.381 0.00 0.00 0.00 3.24
2780 10229 1.067354 CCAGCCTTGAATCCTGTTTGC 60.067 52.381 0.00 0.00 0.00 3.68
2781 10230 1.067354 CAGCCTTGAATCCTGTTTGCC 60.067 52.381 0.00 0.00 0.00 4.52
2791 10240 5.951148 TGAATCCTGTTTGCCAAGAATATCA 59.049 36.000 0.00 0.00 0.00 2.15
2793 10242 6.645790 ATCCTGTTTGCCAAGAATATCATC 57.354 37.500 0.00 0.00 0.00 2.92
2794 10243 5.759059 TCCTGTTTGCCAAGAATATCATCT 58.241 37.500 0.00 0.00 0.00 2.90
2795 10244 5.591472 TCCTGTTTGCCAAGAATATCATCTG 59.409 40.000 0.00 0.00 0.00 2.90
2797 10246 5.508567 TGTTTGCCAAGAATATCATCTGGA 58.491 37.500 0.00 0.00 0.00 3.86
2798 10247 5.357878 TGTTTGCCAAGAATATCATCTGGAC 59.642 40.000 0.00 0.00 0.00 4.02
2799 10248 3.732212 TGCCAAGAATATCATCTGGACG 58.268 45.455 0.00 0.00 0.00 4.79
2801 10250 3.805108 GCCAAGAATATCATCTGGACGCT 60.805 47.826 0.00 0.00 0.00 5.07
2834 10297 1.543429 CCTCTGGTTTCAGGTGTGGTC 60.543 57.143 0.00 0.00 41.23 4.02
2839 10302 1.068417 TTTCAGGTGTGGTCGACGG 59.932 57.895 9.92 0.00 0.00 4.79
2905 10369 3.908951 CGTAACGATGCCGCGGTG 61.909 66.667 28.70 16.57 39.95 4.94
2929 10403 1.476891 TGTCGTCTAGGAACCTGCATC 59.523 52.381 3.36 0.00 0.00 3.91
2943 10417 2.879026 CCTGCATCACCATCATCTGAAG 59.121 50.000 0.00 0.00 0.00 3.02
3013 10487 1.302033 CGAAAGGCAGGCAGTCAGT 60.302 57.895 0.00 0.00 0.00 3.41
3014 10488 1.572085 CGAAAGGCAGGCAGTCAGTG 61.572 60.000 0.00 0.00 0.00 3.66
3015 10489 0.250467 GAAAGGCAGGCAGTCAGTGA 60.250 55.000 0.00 0.00 0.00 3.41
3016 10490 0.250640 AAAGGCAGGCAGTCAGTGAG 60.251 55.000 0.00 0.00 0.00 3.51
3017 10491 1.414061 AAGGCAGGCAGTCAGTGAGT 61.414 55.000 0.00 0.00 0.00 3.41
3018 10492 1.375268 GGCAGGCAGTCAGTGAGTC 60.375 63.158 0.00 0.00 0.00 3.36
3019 10493 1.368950 GCAGGCAGTCAGTGAGTCA 59.631 57.895 0.00 0.00 0.00 3.41
3020 10494 0.669932 GCAGGCAGTCAGTGAGTCAG 60.670 60.000 0.00 0.00 0.00 3.51
3021 10495 0.678395 CAGGCAGTCAGTGAGTCAGT 59.322 55.000 0.00 0.00 0.00 3.41
3022 10496 1.069823 CAGGCAGTCAGTGAGTCAGTT 59.930 52.381 0.00 0.00 0.00 3.16
3023 10497 1.069823 AGGCAGTCAGTGAGTCAGTTG 59.930 52.381 0.00 0.00 0.00 3.16
3024 10498 1.202580 GGCAGTCAGTGAGTCAGTTGT 60.203 52.381 0.00 0.00 0.00 3.32
3025 10499 2.131183 GCAGTCAGTGAGTCAGTTGTC 58.869 52.381 0.00 0.00 0.00 3.18
3026 10500 2.481969 GCAGTCAGTGAGTCAGTTGTCA 60.482 50.000 0.00 0.00 0.00 3.58
3027 10501 3.379240 CAGTCAGTGAGTCAGTTGTCAG 58.621 50.000 0.00 0.00 0.00 3.51
3028 10502 3.027412 AGTCAGTGAGTCAGTTGTCAGT 58.973 45.455 0.00 0.00 0.00 3.41
3029 10503 3.119291 GTCAGTGAGTCAGTTGTCAGTG 58.881 50.000 0.00 1.46 42.99 3.66
3061 10546 1.190643 AGCTCTCACCAGGCTAGAAC 58.809 55.000 0.00 0.00 34.31 3.01
3062 10547 0.176910 GCTCTCACCAGGCTAGAACC 59.823 60.000 0.00 0.00 0.00 3.62
3063 10548 1.859302 CTCTCACCAGGCTAGAACCT 58.141 55.000 0.00 0.00 42.30 3.50
3064 10549 1.754226 CTCTCACCAGGCTAGAACCTC 59.246 57.143 0.00 0.00 38.26 3.85
3065 10550 1.359474 TCTCACCAGGCTAGAACCTCT 59.641 52.381 0.00 0.00 38.26 3.69
3070 10555 2.835156 ACCAGGCTAGAACCTCTTTCTC 59.165 50.000 0.00 0.00 44.02 2.87
3083 10578 8.103935 AGAACCTCTTTCTCTTTACCCTTATTG 58.896 37.037 0.00 0.00 40.98 1.90
3086 10581 8.049721 ACCTCTTTCTCTTTACCCTTATTGATG 58.950 37.037 0.00 0.00 0.00 3.07
3117 11771 0.750546 TATCTCCCGTGGTCCGTCAG 60.751 60.000 0.00 0.00 33.66 3.51
3118 11772 2.783122 ATCTCCCGTGGTCCGTCAGT 62.783 60.000 0.00 0.00 33.66 3.41
3119 11773 2.522436 TCCCGTGGTCCGTCAGTT 60.522 61.111 0.00 0.00 33.66 3.16
3120 11774 1.228521 TCCCGTGGTCCGTCAGTTA 60.229 57.895 0.00 0.00 33.66 2.24
3121 11775 0.612732 TCCCGTGGTCCGTCAGTTAT 60.613 55.000 0.00 0.00 33.66 1.89
3122 11776 0.179119 CCCGTGGTCCGTCAGTTATC 60.179 60.000 0.00 0.00 33.66 1.75
3123 11777 0.815734 CCGTGGTCCGTCAGTTATCT 59.184 55.000 0.00 0.00 33.66 1.98
3125 11779 2.259618 CGTGGTCCGTCAGTTATCTTG 58.740 52.381 0.00 0.00 0.00 3.02
3128 11782 3.432252 GTGGTCCGTCAGTTATCTTGTTG 59.568 47.826 0.00 0.00 0.00 3.33
3137 11791 6.019075 CGTCAGTTATCTTGTTGTTGTCTTGA 60.019 38.462 0.00 0.00 0.00 3.02
3151 11805 2.731451 TGTCTTGAGTCGCGATTTTCTG 59.269 45.455 14.06 8.42 0.00 3.02
3154 11808 1.710013 TGAGTCGCGATTTTCTGGTC 58.290 50.000 14.06 0.00 0.00 4.02
3156 11810 0.736325 AGTCGCGATTTTCTGGTCGG 60.736 55.000 14.06 0.00 38.24 4.79
3168 11822 4.295119 GGTCGGTCTGGTGTGCGT 62.295 66.667 0.00 0.00 0.00 5.24
3191 11845 1.202110 GCATGCATGGTCACTCTTTCG 60.202 52.381 27.34 0.00 0.00 3.46
3205 11913 1.673920 TCTTTCGTGTTTCCCTGTTGC 59.326 47.619 0.00 0.00 0.00 4.17
3275 12143 2.566833 CTGGTGAAATCCCAGTCACA 57.433 50.000 6.18 0.00 44.89 3.58
3276 12144 3.077484 CTGGTGAAATCCCAGTCACAT 57.923 47.619 6.18 0.00 44.89 3.21
3277 12145 3.424703 CTGGTGAAATCCCAGTCACATT 58.575 45.455 6.18 0.00 44.89 2.71
3279 12147 3.573538 TGGTGAAATCCCAGTCACATTTG 59.426 43.478 6.18 0.00 44.89 2.32
3281 12149 4.039124 GGTGAAATCCCAGTCACATTTGTT 59.961 41.667 6.18 0.00 44.89 2.83
3310 12178 7.365741 TCATCATTGTTTCTTTCTTTCTGAGC 58.634 34.615 0.00 0.00 0.00 4.26
3318 12186 5.757850 TCTTTCTTTCTGAGCTTGGTTTC 57.242 39.130 0.00 0.00 0.00 2.78
3343 12211 4.351874 TTTTTGGTTGTTTTGTCACCCA 57.648 36.364 0.00 0.00 0.00 4.51
3346 12267 2.374184 TGGTTGTTTTGTCACCCAGAG 58.626 47.619 0.00 0.00 0.00 3.35
3347 12268 1.067060 GGTTGTTTTGTCACCCAGAGC 59.933 52.381 0.00 0.00 0.00 4.09
3355 12276 1.301716 TCACCCAGAGCGCTGTTTC 60.302 57.895 18.48 0.00 40.63 2.78
3360 12281 1.086634 CCAGAGCGCTGTTTCTAGCC 61.087 60.000 18.48 0.00 40.63 3.93
3365 12286 2.158959 CGCTGTTTCTAGCCGGACG 61.159 63.158 5.05 0.00 40.59 4.79
3386 12308 1.401539 GCGCAAGGAACAGAAATGGTC 60.402 52.381 0.30 0.00 38.28 4.02
3389 12311 3.416156 GCAAGGAACAGAAATGGTCTCT 58.584 45.455 0.00 0.00 32.70 3.10
3390 12312 3.823304 GCAAGGAACAGAAATGGTCTCTT 59.177 43.478 0.00 0.00 32.70 2.85
3391 12313 4.279420 GCAAGGAACAGAAATGGTCTCTTT 59.721 41.667 0.00 0.00 32.70 2.52
3392 12314 5.766222 CAAGGAACAGAAATGGTCTCTTTG 58.234 41.667 0.00 0.00 32.70 2.77
3393 12315 5.053978 AGGAACAGAAATGGTCTCTTTGT 57.946 39.130 0.00 0.00 32.70 2.83
3394 12316 4.823989 AGGAACAGAAATGGTCTCTTTGTG 59.176 41.667 0.00 0.00 32.70 3.33
3396 12318 3.490348 ACAGAAATGGTCTCTTTGTGGG 58.510 45.455 0.00 0.00 32.70 4.61
3397 12319 3.138283 ACAGAAATGGTCTCTTTGTGGGA 59.862 43.478 0.00 0.00 32.70 4.37
3398 12320 3.503748 CAGAAATGGTCTCTTTGTGGGAC 59.496 47.826 0.00 0.00 32.70 4.46
3399 12321 2.185004 AATGGTCTCTTTGTGGGACG 57.815 50.000 0.00 0.00 0.00 4.79
3401 12323 1.371558 GGTCTCTTTGTGGGACGCT 59.628 57.895 0.00 0.00 40.97 5.07
3405 12327 0.040067 CTCTTTGTGGGACGCTTTGC 60.040 55.000 0.00 0.00 40.97 3.68
3406 12328 1.007387 CTTTGTGGGACGCTTTGCC 60.007 57.895 0.00 0.00 40.97 4.52
3407 12329 1.733402 CTTTGTGGGACGCTTTGCCA 61.733 55.000 0.00 0.00 45.18 4.92
3411 12333 2.281484 GGGACGCTTTGCCAGACA 60.281 61.111 0.00 0.00 35.18 3.41
3412 12334 1.896660 GGGACGCTTTGCCAGACAA 60.897 57.895 0.00 0.00 35.18 3.18
3413 12335 1.282875 GGACGCTTTGCCAGACAAC 59.717 57.895 0.00 0.00 38.23 3.32
3414 12336 1.282875 GACGCTTTGCCAGACAACC 59.717 57.895 0.00 0.00 38.23 3.77
3415 12337 1.444119 GACGCTTTGCCAGACAACCA 61.444 55.000 0.00 0.00 38.23 3.67
3416 12338 1.034838 ACGCTTTGCCAGACAACCAA 61.035 50.000 0.00 0.00 38.23 3.67
3417 12339 0.594796 CGCTTTGCCAGACAACCAAC 60.595 55.000 0.00 0.00 38.23 3.77
3418 12340 0.249447 GCTTTGCCAGACAACCAACC 60.249 55.000 0.00 0.00 38.23 3.77
3419 12341 1.110442 CTTTGCCAGACAACCAACCA 58.890 50.000 0.00 0.00 38.23 3.67
3420 12342 1.480137 CTTTGCCAGACAACCAACCAA 59.520 47.619 0.00 0.00 38.23 3.67
3421 12343 1.561643 TTGCCAGACAACCAACCAAA 58.438 45.000 0.00 0.00 31.73 3.28
3426 12348 3.320826 GCCAGACAACCAACCAAAATACT 59.679 43.478 0.00 0.00 0.00 2.12
3427 12349 4.521256 GCCAGACAACCAACCAAAATACTA 59.479 41.667 0.00 0.00 0.00 1.82
3430 12352 6.264518 CCAGACAACCAACCAAAATACTAGTT 59.735 38.462 0.00 0.00 0.00 2.24
3431 12353 7.446013 CCAGACAACCAACCAAAATACTAGTTA 59.554 37.037 0.00 0.00 0.00 2.24
3432 12354 8.287503 CAGACAACCAACCAAAATACTAGTTAC 58.712 37.037 0.00 0.00 0.00 2.50
3433 12355 7.446319 AGACAACCAACCAAAATACTAGTTACC 59.554 37.037 0.00 0.00 0.00 2.85
3435 12357 8.439172 ACAACCAACCAAAATACTAGTTACCTA 58.561 33.333 0.00 0.00 0.00 3.08
3436 12358 8.724229 CAACCAACCAAAATACTAGTTACCTAC 58.276 37.037 0.00 0.00 0.00 3.18
3437 12359 7.397221 ACCAACCAAAATACTAGTTACCTACC 58.603 38.462 0.00 0.00 0.00 3.18
3438 12360 6.825213 CCAACCAAAATACTAGTTACCTACCC 59.175 42.308 0.00 0.00 0.00 3.69
3439 12361 7.311486 CCAACCAAAATACTAGTTACCTACCCT 60.311 40.741 0.00 0.00 0.00 4.34
3440 12362 7.819521 ACCAAAATACTAGTTACCTACCCTT 57.180 36.000 0.00 0.00 0.00 3.95
3443 12365 7.555195 CCAAAATACTAGTTACCTACCCTTTGG 59.445 40.741 0.00 4.26 33.98 3.28
3444 12366 5.883685 ATACTAGTTACCTACCCTTTGGC 57.116 43.478 0.00 0.00 33.59 4.52
3446 12368 2.055246 AGTTACCTACCCTTTGGCCT 57.945 50.000 3.32 0.00 33.59 5.19
3448 12370 2.720254 AGTTACCTACCCTTTGGCCTTT 59.280 45.455 3.32 0.00 33.59 3.11
3449 12371 2.823747 GTTACCTACCCTTTGGCCTTTG 59.176 50.000 3.32 0.00 33.59 2.77
3453 12375 2.622977 CCTACCCTTTGGCCTTTGCATA 60.623 50.000 3.32 0.00 40.13 3.14
3454 12376 1.266178 ACCCTTTGGCCTTTGCATAC 58.734 50.000 3.32 0.00 40.13 2.39
3466 12388 6.036470 GGCCTTTGCATACATAGAAAAAGAC 58.964 40.000 0.00 0.00 40.13 3.01
3468 12390 6.749118 GCCTTTGCATACATAGAAAAAGACTG 59.251 38.462 0.00 0.00 37.47 3.51
3469 12391 7.253422 CCTTTGCATACATAGAAAAAGACTGG 58.747 38.462 0.00 0.00 0.00 4.00
3471 12393 6.741992 TGCATACATAGAAAAAGACTGGTG 57.258 37.500 0.00 0.00 0.00 4.17
3494 13490 2.362169 ACACAAGTGTTTGGTTGCAC 57.638 45.000 0.00 0.00 41.83 4.57
3495 13491 1.892474 ACACAAGTGTTTGGTTGCACT 59.108 42.857 0.00 0.00 46.61 4.40
3499 13495 2.671130 AGTGTTTGGTTGCACTTTGG 57.329 45.000 0.00 0.00 42.61 3.28
3501 13497 2.301583 AGTGTTTGGTTGCACTTTGGTT 59.698 40.909 0.00 0.00 42.61 3.67
3502 13498 2.414825 GTGTTTGGTTGCACTTTGGTTG 59.585 45.455 0.00 0.00 33.22 3.77
3503 13499 2.006169 GTTTGGTTGCACTTTGGTTGG 58.994 47.619 0.00 0.00 0.00 3.77
3506 13502 0.106521 GGTTGCACTTTGGTTGGCAT 59.893 50.000 0.00 0.00 35.98 4.40
3508 13504 0.106335 TTGCACTTTGGTTGGCATGG 59.894 50.000 0.00 0.00 35.98 3.66
3509 13505 1.047596 TGCACTTTGGTTGGCATGGT 61.048 50.000 0.00 0.00 0.00 3.55
3510 13506 0.600782 GCACTTTGGTTGGCATGGTG 60.601 55.000 0.00 0.00 0.00 4.17
3511 13507 0.600782 CACTTTGGTTGGCATGGTGC 60.601 55.000 0.00 0.00 44.08 5.01
3512 13508 0.760189 ACTTTGGTTGGCATGGTGCT 60.760 50.000 1.64 0.00 44.28 4.40
3514 13510 1.203052 CTTTGGTTGGCATGGTGCTAG 59.797 52.381 1.64 0.00 44.28 3.42
3515 13511 0.112218 TTGGTTGGCATGGTGCTAGT 59.888 50.000 1.64 0.00 44.28 2.57
3516 13512 0.988063 TGGTTGGCATGGTGCTAGTA 59.012 50.000 1.64 0.00 44.28 1.82
3517 13513 1.563879 TGGTTGGCATGGTGCTAGTAT 59.436 47.619 1.64 0.00 44.28 2.12
3518 13514 2.774809 TGGTTGGCATGGTGCTAGTATA 59.225 45.455 1.64 0.00 44.28 1.47
3519 13515 3.181455 TGGTTGGCATGGTGCTAGTATAG 60.181 47.826 1.64 0.00 44.28 1.31
3520 13516 3.181454 GGTTGGCATGGTGCTAGTATAGT 60.181 47.826 1.64 0.00 44.28 2.12
3521 13517 4.039973 GGTTGGCATGGTGCTAGTATAGTA 59.960 45.833 1.64 0.00 44.28 1.82
3522 13518 5.280011 GGTTGGCATGGTGCTAGTATAGTAT 60.280 44.000 1.64 0.00 44.28 2.12
3524 13520 6.775594 TGGCATGGTGCTAGTATAGTATAG 57.224 41.667 1.64 0.00 44.28 1.31
3534 13530 7.648039 GCTAGTATAGTATAGCACTGGGATT 57.352 40.000 6.65 0.00 43.17 3.01
3536 13532 8.192110 GCTAGTATAGTATAGCACTGGGATTTC 58.808 40.741 6.65 0.00 43.17 2.17
3537 13533 7.483580 AGTATAGTATAGCACTGGGATTTCC 57.516 40.000 0.00 0.00 38.24 3.13
3550 13546 3.850122 GGATTTCCCTTTGAAACGGAG 57.150 47.619 0.00 0.00 45.38 4.63
3555 13551 0.821711 CCCTTTGAAACGGAGTGCCA 60.822 55.000 0.00 0.00 45.00 4.92
3560 13556 2.163818 TGAAACGGAGTGCCAACTAG 57.836 50.000 0.00 0.00 45.00 2.57
3563 13559 3.251571 GAAACGGAGTGCCAACTAGTAG 58.748 50.000 0.00 0.00 45.00 2.57
3564 13560 2.211250 ACGGAGTGCCAACTAGTAGA 57.789 50.000 3.59 0.00 42.51 2.59
3565 13561 2.522185 ACGGAGTGCCAACTAGTAGAA 58.478 47.619 3.59 0.00 42.51 2.10
3566 13562 2.895404 ACGGAGTGCCAACTAGTAGAAA 59.105 45.455 3.59 0.00 42.51 2.52
3568 13564 3.676324 CGGAGTGCCAACTAGTAGAAAGG 60.676 52.174 3.59 3.75 36.52 3.11
3571 13567 1.007580 GCCAACTAGTAGAAAGGCGC 58.992 55.000 3.59 0.00 31.88 6.53
3572 13568 1.653151 CCAACTAGTAGAAAGGCGCC 58.347 55.000 21.89 21.89 0.00 6.53
3573 13569 1.653151 CAACTAGTAGAAAGGCGCCC 58.347 55.000 26.15 8.19 0.00 6.13
3574 13570 0.175073 AACTAGTAGAAAGGCGCCCG 59.825 55.000 26.15 2.79 0.00 6.13
3575 13571 0.969409 ACTAGTAGAAAGGCGCCCGT 60.969 55.000 26.15 11.90 0.00 5.28
3577 13573 1.952102 TAGTAGAAAGGCGCCCGTGG 61.952 60.000 26.15 0.00 0.00 4.94
3578 13574 3.315949 TAGAAAGGCGCCCGTGGT 61.316 61.111 26.15 7.02 0.00 4.16
3581 13577 4.572571 AAAGGCGCCCGTGGTCAA 62.573 61.111 26.15 0.00 0.00 3.18
3588 13584 1.745489 GCCCGTGGTCAACTGGATC 60.745 63.158 0.00 0.00 35.21 3.36
3589 13585 1.676968 CCCGTGGTCAACTGGATCA 59.323 57.895 0.00 0.00 35.21 2.92
3594 13590 0.608130 TGGTCAACTGGATCACTCGG 59.392 55.000 0.00 0.00 29.58 4.63
3596 13592 1.002087 GGTCAACTGGATCACTCGGTT 59.998 52.381 0.00 0.00 0.00 4.44
3598 13594 2.480419 GTCAACTGGATCACTCGGTTTG 59.520 50.000 0.00 0.00 0.00 2.93
3599 13595 1.197721 CAACTGGATCACTCGGTTTGC 59.802 52.381 0.00 0.00 0.00 3.68
3600 13596 0.670546 ACTGGATCACTCGGTTTGCG 60.671 55.000 0.00 0.00 0.00 4.85
3601 13597 0.670546 CTGGATCACTCGGTTTGCGT 60.671 55.000 0.00 0.00 0.00 5.24
3602 13598 0.948623 TGGATCACTCGGTTTGCGTG 60.949 55.000 0.00 0.00 0.00 5.34
3603 13599 1.132640 GATCACTCGGTTTGCGTGC 59.867 57.895 0.00 0.00 0.00 5.34
3604 13600 1.291877 GATCACTCGGTTTGCGTGCT 61.292 55.000 0.00 0.00 0.00 4.40
3605 13601 1.291877 ATCACTCGGTTTGCGTGCTC 61.292 55.000 0.00 0.00 0.00 4.26
3606 13602 1.956170 CACTCGGTTTGCGTGCTCT 60.956 57.895 0.00 0.00 0.00 4.09
3607 13603 1.227556 ACTCGGTTTGCGTGCTCTT 60.228 52.632 0.00 0.00 0.00 2.85
3608 13604 0.814010 ACTCGGTTTGCGTGCTCTTT 60.814 50.000 0.00 0.00 0.00 2.52
3610 13606 0.812014 TCGGTTTGCGTGCTCTTTGA 60.812 50.000 0.00 0.00 0.00 2.69
3611 13607 0.238289 CGGTTTGCGTGCTCTTTGAT 59.762 50.000 0.00 0.00 0.00 2.57
3612 13608 1.334960 CGGTTTGCGTGCTCTTTGATT 60.335 47.619 0.00 0.00 0.00 2.57
3613 13609 2.319472 GGTTTGCGTGCTCTTTGATTC 58.681 47.619 0.00 0.00 0.00 2.52
3614 13610 2.287547 GGTTTGCGTGCTCTTTGATTCA 60.288 45.455 0.00 0.00 0.00 2.57
3615 13611 2.975410 TTGCGTGCTCTTTGATTCAG 57.025 45.000 0.00 0.00 0.00 3.02
3623 13619 3.229552 GCTCTTTGATTCAGCACGAAAC 58.770 45.455 0.00 0.00 37.12 2.78
3627 13624 2.686558 TGATTCAGCACGAAACAAGC 57.313 45.000 0.00 0.00 37.12 4.01
3629 13626 2.357323 TGATTCAGCACGAAACAAGCAA 59.643 40.909 0.00 0.00 37.12 3.91
3631 13628 2.473530 TCAGCACGAAACAAGCAAAG 57.526 45.000 0.00 0.00 0.00 2.77
3646 13661 2.093973 AGCAAAGATCTAGGGTGTCGTG 60.094 50.000 0.00 0.00 0.00 4.35
3677 13860 2.043625 CTTGGCTTGCTGCAAAGGA 58.956 52.632 16.74 0.00 46.38 3.36
3686 13869 4.201861 GCTTGCTGCAAAGGATAACTAGTC 60.202 45.833 16.74 0.00 42.31 2.59
3691 13874 3.519510 TGCAAAGGATAACTAGTCTGGCT 59.480 43.478 0.00 0.00 0.00 4.75
3692 13875 4.714802 TGCAAAGGATAACTAGTCTGGCTA 59.285 41.667 0.00 0.00 0.00 3.93
3756 13939 2.415090 CCTCTTGCTGCTGTTAATGTGC 60.415 50.000 0.00 0.00 0.00 4.57
3790 14105 4.310357 GCTCTTTCTAGCACTACTACCC 57.690 50.000 0.00 0.00 42.30 3.69
3792 14107 4.440387 GCTCTTTCTAGCACTACTACCCAC 60.440 50.000 0.00 0.00 42.30 4.61
3796 14111 6.546403 TCTTTCTAGCACTACTACCCACTATG 59.454 42.308 0.00 0.00 0.00 2.23
3901 14302 2.297033 ACTTTGTGTGTTGATGGCATCC 59.703 45.455 23.92 10.61 0.00 3.51
3902 14303 1.992538 TTGTGTGTTGATGGCATCCA 58.007 45.000 23.92 11.26 38.19 3.41
3911 14312 4.883585 TGTTGATGGCATCCAGAGTATTTC 59.116 41.667 23.92 0.30 36.75 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.507280 CATCTACAACTATGGTTAGCAAATTTG 57.493 33.333 14.03 14.03 33.88 2.32
1 2 8.190784 GCATCTACAACTATGGTTAGCAAATTT 58.809 33.333 0.00 0.00 33.88 1.82
2 3 7.557719 AGCATCTACAACTATGGTTAGCAAATT 59.442 33.333 0.00 0.00 33.88 1.82
3 4 7.056635 AGCATCTACAACTATGGTTAGCAAAT 58.943 34.615 0.00 0.00 33.88 2.32
4 5 6.414732 AGCATCTACAACTATGGTTAGCAAA 58.585 36.000 0.00 0.00 33.88 3.68
5 6 5.989477 AGCATCTACAACTATGGTTAGCAA 58.011 37.500 0.00 0.00 33.88 3.91
6 7 5.601662 GAGCATCTACAACTATGGTTAGCA 58.398 41.667 0.00 0.00 34.16 3.49
7 8 4.681942 CGAGCATCTACAACTATGGTTAGC 59.318 45.833 0.00 0.00 34.16 3.09
8 9 5.009710 TCCGAGCATCTACAACTATGGTTAG 59.990 44.000 0.00 0.00 34.16 2.34
9 10 4.891168 TCCGAGCATCTACAACTATGGTTA 59.109 41.667 0.00 0.00 34.16 2.85
10 11 3.704566 TCCGAGCATCTACAACTATGGTT 59.295 43.478 0.00 0.00 34.16 3.67
11 12 3.068307 GTCCGAGCATCTACAACTATGGT 59.932 47.826 0.00 0.00 36.57 3.55
12 13 3.553096 GGTCCGAGCATCTACAACTATGG 60.553 52.174 0.00 0.00 0.00 2.74
13 14 3.643763 GGTCCGAGCATCTACAACTATG 58.356 50.000 0.00 0.00 0.00 2.23
14 15 2.293677 CGGTCCGAGCATCTACAACTAT 59.706 50.000 4.91 0.00 0.00 2.12
15 16 1.674441 CGGTCCGAGCATCTACAACTA 59.326 52.381 4.91 0.00 0.00 2.24
16 17 0.456221 CGGTCCGAGCATCTACAACT 59.544 55.000 4.91 0.00 0.00 3.16
17 18 0.527817 CCGGTCCGAGCATCTACAAC 60.528 60.000 14.39 0.00 0.00 3.32
18 19 0.968901 ACCGGTCCGAGCATCTACAA 60.969 55.000 14.39 0.00 0.00 2.41
19 20 1.379443 ACCGGTCCGAGCATCTACA 60.379 57.895 14.39 0.00 0.00 2.74
20 21 1.065928 CACCGGTCCGAGCATCTAC 59.934 63.158 14.39 0.00 0.00 2.59
21 22 1.077285 TCACCGGTCCGAGCATCTA 60.077 57.895 14.39 0.00 0.00 1.98
22 23 2.362503 TCACCGGTCCGAGCATCT 60.363 61.111 14.39 0.00 0.00 2.90
23 24 1.381928 TACTCACCGGTCCGAGCATC 61.382 60.000 19.16 0.00 32.21 3.91
24 25 0.968901 TTACTCACCGGTCCGAGCAT 60.969 55.000 19.16 6.16 32.21 3.79
25 26 1.180456 TTTACTCACCGGTCCGAGCA 61.180 55.000 19.16 6.33 32.21 4.26
26 27 0.037975 TTTTACTCACCGGTCCGAGC 60.038 55.000 19.16 0.00 32.21 5.03
27 28 2.443887 TTTTTACTCACCGGTCCGAG 57.556 50.000 17.97 17.97 35.30 4.63
61 62 9.014297 GGCATCACATACTAGGCTTTATATTTT 57.986 33.333 0.00 0.00 0.00 1.82
62 63 7.611855 GGGCATCACATACTAGGCTTTATATTT 59.388 37.037 0.00 0.00 0.00 1.40
63 64 7.037297 AGGGCATCACATACTAGGCTTTATATT 60.037 37.037 0.00 0.00 0.00 1.28
64 65 6.445139 AGGGCATCACATACTAGGCTTTATAT 59.555 38.462 0.00 0.00 0.00 0.86
65 66 5.785423 AGGGCATCACATACTAGGCTTTATA 59.215 40.000 0.00 0.00 0.00 0.98
66 67 4.599241 AGGGCATCACATACTAGGCTTTAT 59.401 41.667 0.00 0.00 0.00 1.40
67 68 3.973973 AGGGCATCACATACTAGGCTTTA 59.026 43.478 0.00 0.00 0.00 1.85
68 69 2.780010 AGGGCATCACATACTAGGCTTT 59.220 45.455 0.00 0.00 0.00 3.51
69 70 2.412591 AGGGCATCACATACTAGGCTT 58.587 47.619 0.00 0.00 0.00 4.35
70 71 2.109229 AGGGCATCACATACTAGGCT 57.891 50.000 0.00 0.00 0.00 4.58
71 72 4.351874 TTTAGGGCATCACATACTAGGC 57.648 45.455 0.00 0.00 0.00 3.93
95 96 9.543783 AGTTTCTCTAGTCGTTTTAATCAACTT 57.456 29.630 0.00 0.00 0.00 2.66
96 97 9.194271 GAGTTTCTCTAGTCGTTTTAATCAACT 57.806 33.333 0.00 0.00 0.00 3.16
97 98 8.975439 TGAGTTTCTCTAGTCGTTTTAATCAAC 58.025 33.333 0.00 0.00 0.00 3.18
98 99 9.193133 CTGAGTTTCTCTAGTCGTTTTAATCAA 57.807 33.333 0.00 0.00 0.00 2.57
99 100 8.573885 TCTGAGTTTCTCTAGTCGTTTTAATCA 58.426 33.333 0.00 0.00 0.00 2.57
100 101 8.967552 TCTGAGTTTCTCTAGTCGTTTTAATC 57.032 34.615 0.00 0.00 0.00 1.75
101 102 7.542824 GCTCTGAGTTTCTCTAGTCGTTTTAAT 59.457 37.037 6.53 0.00 0.00 1.40
102 103 6.862090 GCTCTGAGTTTCTCTAGTCGTTTTAA 59.138 38.462 6.53 0.00 0.00 1.52
103 104 6.016527 TGCTCTGAGTTTCTCTAGTCGTTTTA 60.017 38.462 6.53 0.00 0.00 1.52
104 105 5.221263 TGCTCTGAGTTTCTCTAGTCGTTTT 60.221 40.000 6.53 0.00 0.00 2.43
105 106 4.278669 TGCTCTGAGTTTCTCTAGTCGTTT 59.721 41.667 6.53 0.00 0.00 3.60
106 107 3.821600 TGCTCTGAGTTTCTCTAGTCGTT 59.178 43.478 6.53 0.00 0.00 3.85
107 108 3.189702 GTGCTCTGAGTTTCTCTAGTCGT 59.810 47.826 6.53 0.00 0.00 4.34
108 109 3.189495 TGTGCTCTGAGTTTCTCTAGTCG 59.811 47.826 6.53 0.00 0.00 4.18
109 110 4.775058 TGTGCTCTGAGTTTCTCTAGTC 57.225 45.455 6.53 0.00 0.00 2.59
110 111 5.537188 CTTTGTGCTCTGAGTTTCTCTAGT 58.463 41.667 6.53 0.00 0.00 2.57
111 112 4.388469 GCTTTGTGCTCTGAGTTTCTCTAG 59.612 45.833 6.53 0.00 38.95 2.43
112 113 4.202253 TGCTTTGTGCTCTGAGTTTCTCTA 60.202 41.667 6.53 0.00 43.37 2.43
113 114 3.137533 GCTTTGTGCTCTGAGTTTCTCT 58.862 45.455 6.53 0.00 38.95 3.10
114 115 2.874701 TGCTTTGTGCTCTGAGTTTCTC 59.125 45.455 6.53 0.00 43.37 2.87
115 116 2.877168 CTGCTTTGTGCTCTGAGTTTCT 59.123 45.455 6.53 0.00 43.37 2.52
116 117 2.031333 CCTGCTTTGTGCTCTGAGTTTC 60.031 50.000 6.53 0.00 43.37 2.78
117 118 1.952296 CCTGCTTTGTGCTCTGAGTTT 59.048 47.619 6.53 0.00 43.37 2.66
118 119 1.602311 CCTGCTTTGTGCTCTGAGTT 58.398 50.000 6.53 0.00 43.37 3.01
119 120 0.250640 CCCTGCTTTGTGCTCTGAGT 60.251 55.000 6.53 0.00 43.37 3.41
120 121 0.250640 ACCCTGCTTTGTGCTCTGAG 60.251 55.000 0.00 0.00 43.37 3.35
121 122 0.535780 CACCCTGCTTTGTGCTCTGA 60.536 55.000 0.00 0.00 43.37 3.27
122 123 1.521450 CCACCCTGCTTTGTGCTCTG 61.521 60.000 0.00 0.00 43.37 3.35
123 124 1.228367 CCACCCTGCTTTGTGCTCT 60.228 57.895 0.00 0.00 43.37 4.09
124 125 2.924105 GCCACCCTGCTTTGTGCTC 61.924 63.158 0.00 0.00 43.37 4.26
125 126 2.914097 GCCACCCTGCTTTGTGCT 60.914 61.111 0.00 0.00 43.37 4.40
126 127 2.914097 AGCCACCCTGCTTTGTGC 60.914 61.111 0.00 0.00 38.85 4.57
127 128 2.270986 GGAGCCACCCTGCTTTGTG 61.271 63.158 0.00 0.00 42.95 3.33
128 129 2.116125 GGAGCCACCCTGCTTTGT 59.884 61.111 0.00 0.00 42.95 2.83
129 130 1.975407 CTGGAGCCACCCTGCTTTG 60.975 63.158 0.00 0.00 42.95 2.77
130 131 2.437897 CTGGAGCCACCCTGCTTT 59.562 61.111 0.00 0.00 42.95 3.51
131 132 4.357279 GCTGGAGCCACCCTGCTT 62.357 66.667 10.58 0.00 44.61 3.91
303 334 7.134815 CCAGCATTATTCGCTTTATATATGCC 58.865 38.462 0.00 0.00 37.72 4.40
304 335 7.134815 CCCAGCATTATTCGCTTTATATATGC 58.865 38.462 0.00 0.00 37.72 3.14
305 336 7.498900 TCCCCAGCATTATTCGCTTTATATATG 59.501 37.037 0.00 0.00 37.72 1.78
306 337 7.573710 TCCCCAGCATTATTCGCTTTATATAT 58.426 34.615 0.00 0.00 37.72 0.86
307 338 6.953101 TCCCCAGCATTATTCGCTTTATATA 58.047 36.000 0.00 0.00 37.72 0.86
315 346 3.334583 TCTATCCCCAGCATTATTCGC 57.665 47.619 0.00 0.00 0.00 4.70
338 369 5.383476 CTCATTTTCTGCCCAGATATTCCT 58.617 41.667 0.00 0.00 37.29 3.36
339 374 4.022503 GCTCATTTTCTGCCCAGATATTCC 60.023 45.833 0.00 0.00 37.29 3.01
354 389 9.264719 CTGGTTTTCTTTATTTCTGCTCATTTT 57.735 29.630 0.00 0.00 0.00 1.82
475 512 1.076559 TATGAAGACGGCGAGGGGA 60.077 57.895 16.62 0.00 0.00 4.81
476 513 1.067582 GTATGAAGACGGCGAGGGG 59.932 63.158 16.62 0.00 0.00 4.79
477 514 1.299165 CGTATGAAGACGGCGAGGG 60.299 63.158 16.62 0.00 39.19 4.30
483 526 1.954382 TCCATCCTCGTATGAAGACGG 59.046 52.381 0.00 0.00 43.12 4.79
904 1210 0.174617 GCGGAGGAGGACTTCTTCTG 59.825 60.000 1.53 1.53 40.36 3.02
906 1212 1.258445 TGGCGGAGGAGGACTTCTTC 61.258 60.000 0.00 0.00 0.00 2.87
1087 1399 1.823295 GCTTACTGAGGATGGCGGA 59.177 57.895 0.00 0.00 0.00 5.54
1092 1404 1.227674 GGGGCGCTTACTGAGGATG 60.228 63.158 7.64 0.00 0.00 3.51
1117 1429 0.039618 GCAATTGGAGTTGGAGGGGA 59.960 55.000 7.72 0.00 0.00 4.81
1118 1430 0.972471 GGCAATTGGAGTTGGAGGGG 60.972 60.000 7.72 0.00 0.00 4.79
1124 1436 1.234615 ACCGACGGCAATTGGAGTTG 61.235 55.000 15.39 0.00 0.00 3.16
1125 1437 0.953960 GACCGACGGCAATTGGAGTT 60.954 55.000 15.39 0.00 0.00 3.01
1126 1438 1.375523 GACCGACGGCAATTGGAGT 60.376 57.895 15.39 0.00 0.00 3.85
1128 1440 2.433491 CGACCGACGGCAATTGGA 60.433 61.111 15.39 0.00 38.46 3.53
1137 1449 3.207669 CCTAGGACCCGACCGACG 61.208 72.222 1.05 0.00 42.18 5.12
1138 1450 2.044551 ACCTAGGACCCGACCGAC 60.045 66.667 17.98 0.00 34.73 4.79
1139 1451 2.044650 CACCTAGGACCCGACCGA 60.045 66.667 17.98 0.00 34.73 4.69
1140 1452 2.556840 TACCACCTAGGACCCGACCG 62.557 65.000 17.98 0.00 41.22 4.79
1141 1453 0.754587 CTACCACCTAGGACCCGACC 60.755 65.000 17.98 0.00 41.22 4.79
1142 1454 0.754587 CCTACCACCTAGGACCCGAC 60.755 65.000 17.98 0.00 44.88 4.79
1143 1455 1.217057 ACCTACCACCTAGGACCCGA 61.217 60.000 17.98 0.00 44.88 5.14
1144 1456 0.552848 TACCTACCACCTAGGACCCG 59.447 60.000 17.98 1.58 44.88 5.28
1145 1457 1.133231 CCTACCTACCACCTAGGACCC 60.133 61.905 17.98 0.00 44.88 4.46
1146 1458 1.572895 ACCTACCTACCACCTAGGACC 59.427 57.143 17.98 0.00 44.88 4.46
1147 1459 3.395054 AACCTACCTACCACCTAGGAC 57.605 52.381 17.98 0.00 44.88 3.85
1148 1460 3.716431 CAAACCTACCTACCACCTAGGA 58.284 50.000 17.98 0.00 44.88 2.94
1150 1462 2.169978 GGCAAACCTACCTACCACCTAG 59.830 54.545 0.00 0.00 0.00 3.02
1151 1463 2.190538 GGCAAACCTACCTACCACCTA 58.809 52.381 0.00 0.00 0.00 3.08
1152 1464 0.989602 GGCAAACCTACCTACCACCT 59.010 55.000 0.00 0.00 0.00 4.00
1153 1465 0.392060 CGGCAAACCTACCTACCACC 60.392 60.000 0.00 0.00 0.00 4.61
1154 1466 0.322648 ACGGCAAACCTACCTACCAC 59.677 55.000 0.00 0.00 0.00 4.16
1177 1489 3.555518 GACGCAGAATCAAACCAAACTC 58.444 45.455 0.00 0.00 0.00 3.01
1178 1490 2.293399 GGACGCAGAATCAAACCAAACT 59.707 45.455 0.00 0.00 0.00 2.66
1179 1491 2.661594 GGACGCAGAATCAAACCAAAC 58.338 47.619 0.00 0.00 0.00 2.93
1180 1492 1.265635 CGGACGCAGAATCAAACCAAA 59.734 47.619 0.00 0.00 0.00 3.28
1181 1493 0.871722 CGGACGCAGAATCAAACCAA 59.128 50.000 0.00 0.00 0.00 3.67
1182 1494 0.034198 TCGGACGCAGAATCAAACCA 59.966 50.000 0.00 0.00 0.00 3.67
1183 1495 0.442699 GTCGGACGCAGAATCAAACC 59.557 55.000 0.00 0.00 0.00 3.27
1184 1496 1.390463 GAGTCGGACGCAGAATCAAAC 59.610 52.381 7.02 0.00 33.47 2.93
1185 1497 1.710013 GAGTCGGACGCAGAATCAAA 58.290 50.000 7.02 0.00 33.47 2.69
1186 1498 0.456142 CGAGTCGGACGCAGAATCAA 60.456 55.000 12.31 0.00 32.89 2.57
1187 1499 1.136774 CGAGTCGGACGCAGAATCA 59.863 57.895 12.31 0.00 32.89 2.57
1188 1500 0.029567 ATCGAGTCGGACGCAGAATC 59.970 55.000 13.54 0.00 0.00 2.52
1189 1501 0.456221 AATCGAGTCGGACGCAGAAT 59.544 50.000 13.54 1.47 0.00 2.40
1190 1502 0.179171 GAATCGAGTCGGACGCAGAA 60.179 55.000 13.54 0.00 0.00 3.02
1191 1503 1.428219 GAATCGAGTCGGACGCAGA 59.572 57.895 13.54 10.04 0.00 4.26
1192 1504 1.934956 CGAATCGAGTCGGACGCAG 60.935 63.158 26.23 5.26 37.37 5.18
1193 1505 2.099638 CGAATCGAGTCGGACGCA 59.900 61.111 26.23 0.00 37.37 5.24
1194 1506 2.402388 TCGAATCGAGTCGGACGC 59.598 61.111 31.65 1.65 41.43 5.19
1221 1547 4.090588 TCCGGCCGGAGCGAATTT 62.091 61.111 42.66 0.00 39.76 1.82
1234 1560 3.417224 CATGCGCGATCCATCCGG 61.417 66.667 12.10 0.00 0.00 5.14
1235 1561 3.417224 CCATGCGCGATCCATCCG 61.417 66.667 12.10 0.00 0.00 4.18
1236 1562 3.730761 GCCATGCGCGATCCATCC 61.731 66.667 12.10 0.00 0.00 3.51
1237 1563 2.330372 ATGCCATGCGCGATCCATC 61.330 57.895 12.10 0.00 42.08 3.51
1238 1564 2.281970 ATGCCATGCGCGATCCAT 60.282 55.556 12.10 0.00 42.08 3.41
1239 1565 3.281395 CATGCCATGCGCGATCCA 61.281 61.111 12.10 0.00 42.08 3.41
1240 1566 4.034258 CCATGCCATGCGCGATCC 62.034 66.667 12.10 0.00 42.08 3.36
1241 1567 4.695231 GCCATGCCATGCGCGATC 62.695 66.667 12.10 0.00 42.08 3.69
1258 1584 2.124736 ACACGGATTGATGGGCGG 60.125 61.111 0.00 0.00 0.00 6.13
1304 1630 2.540265 ATCATCATTCTCCTGCGACC 57.460 50.000 0.00 0.00 0.00 4.79
1337 1663 1.374631 TCATGCGTGCAGACTGACC 60.375 57.895 6.65 0.00 0.00 4.02
1343 1669 0.950555 GGACAAGTCATGCGTGCAGA 60.951 55.000 0.00 0.00 0.00 4.26
1344 1670 1.229975 TGGACAAGTCATGCGTGCAG 61.230 55.000 0.00 0.00 0.00 4.41
1345 1671 1.227793 TGGACAAGTCATGCGTGCA 60.228 52.632 0.00 0.00 0.00 4.57
1349 1675 1.781555 GACGTGGACAAGTCATGCG 59.218 57.895 12.41 5.80 39.18 4.73
1351 1677 1.781555 GCGACGTGGACAAGTCATG 59.218 57.895 16.36 4.60 39.29 3.07
1353 1679 2.354188 CGCGACGTGGACAAGTCA 60.354 61.111 16.36 0.00 39.29 3.41
1376 1721 1.577328 GCACAAGTCACGGGTGGATG 61.577 60.000 4.37 0.00 33.25 3.51
1380 1725 1.575922 CATGCACAAGTCACGGGTG 59.424 57.895 0.00 0.00 35.68 4.61
1391 1736 1.259142 CCAGAAATGGGGCATGCACA 61.259 55.000 23.88 19.11 0.00 4.57
1392 1737 1.518774 CCAGAAATGGGGCATGCAC 59.481 57.895 21.36 17.47 0.00 4.57
1400 1749 4.037441 TGGCATGCCAGAAATGGG 57.963 55.556 35.59 0.00 41.89 4.00
1529 1880 9.899661 ACACACTTATTATTAATGCTGGTAGAA 57.100 29.630 0.00 0.00 0.00 2.10
1556 1913 2.037772 AGGTTCAGCAGGACACACTTAG 59.962 50.000 0.00 0.00 0.00 2.18
1564 1921 0.394565 ACTGTCAGGTTCAGCAGGAC 59.605 55.000 4.53 0.00 36.50 3.85
1663 2049 2.287547 TGCGATGTTTTGAACCAAGCTC 60.288 45.455 0.00 0.00 0.00 4.09
1665 2051 2.132740 TGCGATGTTTTGAACCAAGC 57.867 45.000 0.00 0.00 0.00 4.01
1674 2060 5.636121 TCGAACACTAGTAATGCGATGTTTT 59.364 36.000 5.47 0.00 30.72 2.43
1681 2067 3.754955 TGACTCGAACACTAGTAATGCG 58.245 45.455 0.00 0.00 0.00 4.73
1695 2096 2.435069 TGTAAACCCCAAACTGACTCGA 59.565 45.455 0.00 0.00 0.00 4.04
1701 2102 6.834168 ATGAATACTGTAAACCCCAAACTG 57.166 37.500 0.00 0.00 0.00 3.16
1728 2133 3.990469 GTGACACAAACTCATCGTCAGAT 59.010 43.478 0.00 0.00 37.28 2.90
1734 2139 3.384668 ACAGAGTGACACAAACTCATCG 58.615 45.455 8.59 0.00 45.38 3.84
1755 2160 1.079474 TGCATAACTCGGCGAGCAA 60.079 52.632 34.76 23.63 32.04 3.91
1759 2165 1.358725 GCTTGTGCATAACTCGGCGA 61.359 55.000 10.14 10.14 39.41 5.54
1760 2166 1.060937 GCTTGTGCATAACTCGGCG 59.939 57.895 0.00 0.00 39.41 6.46
1779 2185 1.408822 GCCAGGTAAGGTAGCAGCAAT 60.409 52.381 0.00 0.00 0.00 3.56
1785 2191 1.071857 GTATGGGCCAGGTAAGGTAGC 59.928 57.143 13.78 0.00 0.00 3.58
1786 2192 1.697982 GGTATGGGCCAGGTAAGGTAG 59.302 57.143 13.78 0.00 0.00 3.18
1787 2193 1.009799 TGGTATGGGCCAGGTAAGGTA 59.990 52.381 13.78 0.00 33.97 3.08
1788 2194 0.253441 TGGTATGGGCCAGGTAAGGT 60.253 55.000 13.78 0.00 33.97 3.50
1789 2195 1.149101 ATGGTATGGGCCAGGTAAGG 58.851 55.000 13.78 0.00 42.47 2.69
1790 2196 3.810743 GCTAATGGTATGGGCCAGGTAAG 60.811 52.174 13.78 4.08 42.47 2.34
1791 2197 2.107552 GCTAATGGTATGGGCCAGGTAA 59.892 50.000 13.78 0.00 42.47 2.85
1793 2199 0.478507 GCTAATGGTATGGGCCAGGT 59.521 55.000 13.78 0.00 42.47 4.00
1795 2201 2.508526 GAAGCTAATGGTATGGGCCAG 58.491 52.381 13.78 0.00 42.47 4.85
1796 2202 1.202758 CGAAGCTAATGGTATGGGCCA 60.203 52.381 9.61 9.61 43.48 5.36
1797 2203 1.523758 CGAAGCTAATGGTATGGGCC 58.476 55.000 0.00 0.00 0.00 5.80
1800 2206 3.804036 TGAACCGAAGCTAATGGTATGG 58.196 45.455 5.01 0.00 34.11 2.74
1801 2207 5.056480 TGATGAACCGAAGCTAATGGTATG 58.944 41.667 5.01 0.00 34.11 2.39
1806 2212 4.285292 GCAATGATGAACCGAAGCTAATG 58.715 43.478 0.00 0.00 0.00 1.90
1832 2281 5.900865 TGATGCATCACAGATAGCAAAAA 57.099 34.783 25.42 0.00 40.76 1.94
1833 2282 5.591067 TGATGATGCATCACAGATAGCAAAA 59.409 36.000 30.92 4.20 44.60 2.44
1834 2283 5.127491 TGATGATGCATCACAGATAGCAAA 58.873 37.500 30.92 4.42 44.60 3.68
1835 2284 4.710324 TGATGATGCATCACAGATAGCAA 58.290 39.130 30.92 4.97 44.60 3.91
1836 2285 4.345859 TGATGATGCATCACAGATAGCA 57.654 40.909 30.92 13.59 44.60 3.49
1846 2295 6.561737 ATCAGATTCAGTTGATGATGCATC 57.438 37.500 20.14 20.14 40.88 3.91
1847 2296 8.637196 AATATCAGATTCAGTTGATGATGCAT 57.363 30.769 0.00 0.00 37.89 3.96
1848 2297 7.095355 CGAATATCAGATTCAGTTGATGATGCA 60.095 37.037 0.00 0.00 37.89 3.96
1849 2298 7.095313 ACGAATATCAGATTCAGTTGATGATGC 60.095 37.037 6.87 0.00 37.89 3.91
1850 2299 8.221766 CACGAATATCAGATTCAGTTGATGATG 58.778 37.037 6.87 0.00 37.89 3.07
1851 2300 7.930325 ACACGAATATCAGATTCAGTTGATGAT 59.070 33.333 0.00 3.15 37.89 2.45
1852 2301 7.267857 ACACGAATATCAGATTCAGTTGATGA 58.732 34.615 0.00 0.00 35.72 2.92
1853 2302 7.474398 ACACGAATATCAGATTCAGTTGATG 57.526 36.000 0.00 0.00 35.72 3.07
1854 2303 7.984050 AGAACACGAATATCAGATTCAGTTGAT 59.016 33.333 4.97 0.00 37.73 2.57
1855 2304 7.323420 AGAACACGAATATCAGATTCAGTTGA 58.677 34.615 4.97 0.00 30.98 3.18
1856 2305 7.531280 AGAACACGAATATCAGATTCAGTTG 57.469 36.000 4.97 0.00 30.98 3.16
1857 2306 8.037758 AGAAGAACACGAATATCAGATTCAGTT 58.962 33.333 0.00 0.78 32.41 3.16
1858 2307 7.490725 CAGAAGAACACGAATATCAGATTCAGT 59.509 37.037 0.00 0.00 0.00 3.41
1859 2308 7.490725 ACAGAAGAACACGAATATCAGATTCAG 59.509 37.037 0.00 0.00 0.00 3.02
1860 2309 7.323420 ACAGAAGAACACGAATATCAGATTCA 58.677 34.615 0.00 0.00 0.00 2.57
1861 2310 7.763172 ACAGAAGAACACGAATATCAGATTC 57.237 36.000 0.00 0.00 0.00 2.52
1862 2311 7.604164 ACAACAGAAGAACACGAATATCAGATT 59.396 33.333 0.00 0.00 0.00 2.40
1863 2312 7.099764 ACAACAGAAGAACACGAATATCAGAT 58.900 34.615 0.00 0.00 0.00 2.90
1864 2313 6.455647 ACAACAGAAGAACACGAATATCAGA 58.544 36.000 0.00 0.00 0.00 3.27
1865 2314 6.712241 ACAACAGAAGAACACGAATATCAG 57.288 37.500 0.00 0.00 0.00 2.90
1911 2375 2.237392 GTGGCTGGAGGTAGAAACATCT 59.763 50.000 0.00 0.00 36.65 2.90
1913 2377 1.066143 CGTGGCTGGAGGTAGAAACAT 60.066 52.381 0.00 0.00 0.00 2.71
1932 2396 6.475402 ACTTGAGGAATTGCTTTTAAAACACG 59.525 34.615 0.00 0.00 0.00 4.49
1935 2399 8.490355 CATGACTTGAGGAATTGCTTTTAAAAC 58.510 33.333 0.00 0.00 0.00 2.43
1950 2418 2.777969 GCAGGAGCATGACTTGAGG 58.222 57.895 0.00 0.00 41.58 3.86
1988 2461 8.162878 ACCTCATCATATTTGATTGACATGAC 57.837 34.615 0.00 0.00 40.70 3.06
2030 2516 0.179113 CCAACCAACCAACAGTGCAC 60.179 55.000 9.40 9.40 0.00 4.57
2041 2527 3.383185 TCATCTGAAACCAACCAACCAAC 59.617 43.478 0.00 0.00 0.00 3.77
2042 2528 3.636679 TCATCTGAAACCAACCAACCAA 58.363 40.909 0.00 0.00 0.00 3.67
2043 2529 3.304911 TCATCTGAAACCAACCAACCA 57.695 42.857 0.00 0.00 0.00 3.67
2044 2530 4.082125 AGATCATCTGAAACCAACCAACC 58.918 43.478 0.00 0.00 0.00 3.77
2124 2610 2.401699 TGACTGAAGCAGGCACCCTG 62.402 60.000 6.90 6.90 42.40 4.45
2134 2620 2.680312 TGCAGATAGGTGACTGAAGC 57.320 50.000 0.00 0.00 43.88 3.86
2137 2623 6.324770 TCATAGAAATGCAGATAGGTGACTGA 59.675 38.462 0.00 0.00 35.93 3.41
2200 2688 6.749118 GTCATAGAAATGAATGCACAGGAAAC 59.251 38.462 0.00 0.00 43.69 2.78
2214 2702 5.319139 CGTTCAGCAACAGTCATAGAAATG 58.681 41.667 0.00 0.00 32.14 2.32
2251 2767 3.067106 ACAGAAGATACCAAACTGCACG 58.933 45.455 0.00 0.00 32.67 5.34
2290 2806 2.019984 GGATGGTTGTGCAGAGGAATC 58.980 52.381 0.00 0.00 0.00 2.52
2378 4137 1.153269 GGCCAGCCTCTGAGTTAGC 60.153 63.158 0.00 0.07 32.44 3.09
2379 4138 0.980231 AGGGCCAGCCTCTGAGTTAG 60.980 60.000 6.18 0.00 32.44 2.34
2396 4155 0.370273 GTGATGAGCGCGTTGTTAGG 59.630 55.000 8.43 0.00 0.00 2.69
2399 4158 1.291877 GAGGTGATGAGCGCGTTGTT 61.292 55.000 8.43 0.00 0.00 2.83
2400 4159 1.738099 GAGGTGATGAGCGCGTTGT 60.738 57.895 8.43 0.00 0.00 3.32
2401 4160 1.690283 CTGAGGTGATGAGCGCGTTG 61.690 60.000 8.43 0.00 0.00 4.10
2412 4171 7.973048 AGTATTAACTTACCATCTGAGGTGA 57.027 36.000 0.00 1.39 43.14 4.02
2432 4191 5.834204 GGACAGGGAATGACACTACTAGTAT 59.166 44.000 2.33 0.00 0.00 2.12
2433 4192 5.198965 GGACAGGGAATGACACTACTAGTA 58.801 45.833 1.89 1.89 0.00 1.82
2434 4193 4.024670 GGACAGGGAATGACACTACTAGT 58.975 47.826 0.00 0.00 0.00 2.57
2435 4194 3.385111 GGGACAGGGAATGACACTACTAG 59.615 52.174 0.00 0.00 0.00 2.57
2436 4195 3.012502 AGGGACAGGGAATGACACTACTA 59.987 47.826 0.00 0.00 35.45 1.82
2437 4196 2.188817 GGGACAGGGAATGACACTACT 58.811 52.381 0.00 0.00 0.00 2.57
2443 4202 3.071747 GGAATAGAGGGACAGGGAATGAC 59.928 52.174 0.00 0.00 0.00 3.06
2455 4214 9.480861 AAATAAAGAAAAGAAGGGAATAGAGGG 57.519 33.333 0.00 0.00 0.00 4.30
2464 4223 9.556030 GTTCATCGTAAATAAAGAAAAGAAGGG 57.444 33.333 0.00 0.00 0.00 3.95
2479 4240 2.734606 CAACAGGAGCGTTCATCGTAAA 59.265 45.455 0.53 0.00 42.13 2.01
2480 4241 2.333926 CAACAGGAGCGTTCATCGTAA 58.666 47.619 0.53 0.00 42.13 3.18
2481 4242 1.990799 CAACAGGAGCGTTCATCGTA 58.009 50.000 0.53 0.00 42.13 3.43
2482 4243 1.291877 GCAACAGGAGCGTTCATCGT 61.292 55.000 0.53 0.00 42.13 3.73
2483 4244 1.016130 AGCAACAGGAGCGTTCATCG 61.016 55.000 0.53 0.00 43.12 3.84
2484 4245 0.445436 CAGCAACAGGAGCGTTCATC 59.555 55.000 0.53 0.00 37.01 2.92
2485 4246 0.035317 TCAGCAACAGGAGCGTTCAT 59.965 50.000 0.53 0.00 37.01 2.57
2486 4247 0.880278 GTCAGCAACAGGAGCGTTCA 60.880 55.000 0.53 0.00 37.01 3.18
2490 4251 0.877071 AATTGTCAGCAACAGGAGCG 59.123 50.000 0.00 0.00 39.58 5.03
2508 4273 3.314080 GGTGGTCACGACAAGAAAATGAA 59.686 43.478 0.00 0.00 0.00 2.57
2515 4280 2.028484 GCGGTGGTCACGACAAGA 59.972 61.111 0.00 0.00 0.00 3.02
2545 4325 2.729360 GGCGTTTGTGTTTATCTTTGCC 59.271 45.455 0.00 0.00 0.00 4.52
2641 4421 2.281761 AGAACAGCGCAAGGGGTG 60.282 61.111 11.47 13.70 41.07 4.61
2659 7516 3.793888 GGGGGTCCCATCACGTCC 61.794 72.222 10.98 0.00 44.65 4.79
2687 7544 1.448540 CGCAGTCCCTACCAGCAAG 60.449 63.158 0.00 0.00 0.00 4.01
2707 7564 0.747283 ACGGGGACTCGCTGTAGTAG 60.747 60.000 5.78 0.00 34.15 2.57
2735 10184 1.004918 AACACTACTCACCGGCTGC 60.005 57.895 0.00 0.00 0.00 5.25
2748 10197 1.072965 CAAGGCTGGGAAGAGAACACT 59.927 52.381 0.00 0.00 0.00 3.55
2749 10198 1.072331 TCAAGGCTGGGAAGAGAACAC 59.928 52.381 0.00 0.00 0.00 3.32
2750 10199 1.434188 TCAAGGCTGGGAAGAGAACA 58.566 50.000 0.00 0.00 0.00 3.18
2763 10212 0.968405 TGGCAAACAGGATTCAAGGC 59.032 50.000 0.00 0.00 0.00 4.35
2772 10221 5.221185 CCAGATGATATTCTTGGCAAACAGG 60.221 44.000 0.00 0.00 0.00 4.00
2774 10223 5.357878 GTCCAGATGATATTCTTGGCAAACA 59.642 40.000 0.00 0.00 0.00 2.83
2780 10229 4.000331 AGCGTCCAGATGATATTCTTGG 58.000 45.455 0.00 0.00 0.00 3.61
2781 10230 5.050499 GTCAAGCGTCCAGATGATATTCTTG 60.050 44.000 0.00 0.00 0.00 3.02
2791 10240 1.798813 GTTTTCGTCAAGCGTCCAGAT 59.201 47.619 0.00 0.00 42.13 2.90
2793 10242 0.111266 CGTTTTCGTCAAGCGTCCAG 60.111 55.000 0.00 0.00 42.13 3.86
2794 10243 1.928653 CGTTTTCGTCAAGCGTCCA 59.071 52.632 0.00 0.00 42.13 4.02
2795 10244 4.792125 CGTTTTCGTCAAGCGTCC 57.208 55.556 0.00 0.00 42.13 4.79
2834 10297 4.824166 CACGAGTACCGCCCGTCG 62.824 72.222 0.00 1.57 43.32 5.12
2839 10302 3.291101 TTGAGCCACGAGTACCGCC 62.291 63.158 0.00 0.00 43.32 6.13
2904 10368 1.968493 AGGTTCCTAGACGACAAAGCA 59.032 47.619 0.00 0.00 0.00 3.91
2905 10369 2.338500 CAGGTTCCTAGACGACAAAGC 58.662 52.381 0.00 0.00 0.00 3.51
2929 10403 0.816825 CCGCCCTTCAGATGATGGTG 60.817 60.000 12.33 8.95 37.59 4.17
3013 10487 2.760650 ACTGACACTGACAACTGACTCA 59.239 45.455 0.00 0.00 0.00 3.41
3014 10488 3.376540 GACTGACACTGACAACTGACTC 58.623 50.000 0.00 0.00 0.00 3.36
3015 10489 2.101582 GGACTGACACTGACAACTGACT 59.898 50.000 0.00 0.00 0.00 3.41
3016 10490 2.159099 TGGACTGACACTGACAACTGAC 60.159 50.000 0.00 0.00 0.00 3.51
3017 10491 2.107366 TGGACTGACACTGACAACTGA 58.893 47.619 0.00 0.00 0.00 3.41
3018 10492 2.602257 TGGACTGACACTGACAACTG 57.398 50.000 0.00 0.00 0.00 3.16
3019 10493 2.420129 GGTTGGACTGACACTGACAACT 60.420 50.000 0.00 0.00 38.49 3.16
3020 10494 1.940613 GGTTGGACTGACACTGACAAC 59.059 52.381 0.00 0.00 37.92 3.32
3021 10495 1.837439 AGGTTGGACTGACACTGACAA 59.163 47.619 0.00 0.00 0.00 3.18
3022 10496 1.496060 AGGTTGGACTGACACTGACA 58.504 50.000 0.00 0.00 0.00 3.58
3023 10497 2.610727 GCTAGGTTGGACTGACACTGAC 60.611 54.545 0.00 0.00 0.00 3.51
3024 10498 1.618837 GCTAGGTTGGACTGACACTGA 59.381 52.381 0.00 0.00 0.00 3.41
3025 10499 1.620819 AGCTAGGTTGGACTGACACTG 59.379 52.381 0.00 0.00 0.00 3.66
3026 10500 1.896465 GAGCTAGGTTGGACTGACACT 59.104 52.381 0.00 0.00 0.00 3.55
3027 10501 1.896465 AGAGCTAGGTTGGACTGACAC 59.104 52.381 0.00 0.00 0.00 3.67
3028 10502 2.171840 GAGAGCTAGGTTGGACTGACA 58.828 52.381 0.00 0.00 0.00 3.58
3029 10503 2.094442 GTGAGAGCTAGGTTGGACTGAC 60.094 54.545 0.00 0.00 0.00 3.51
3059 10544 7.985589 TCAATAAGGGTAAAGAGAAAGAGGTT 58.014 34.615 0.00 0.00 0.00 3.50
3061 10546 7.500559 CCATCAATAAGGGTAAAGAGAAAGAGG 59.499 40.741 0.00 0.00 0.00 3.69
3062 10547 7.500559 CCCATCAATAAGGGTAAAGAGAAAGAG 59.499 40.741 0.00 0.00 40.34 2.85
3063 10548 7.346471 CCCATCAATAAGGGTAAAGAGAAAGA 58.654 38.462 0.00 0.00 40.34 2.52
3064 10549 6.547510 CCCCATCAATAAGGGTAAAGAGAAAG 59.452 42.308 0.00 0.00 43.89 2.62
3065 10550 6.431722 CCCCATCAATAAGGGTAAAGAGAAA 58.568 40.000 0.00 0.00 43.89 2.52
3083 10578 3.435169 GGGAGATAGTTTCAACCCCCATC 60.435 52.174 0.00 0.00 37.29 3.51
3086 10581 1.134189 CGGGAGATAGTTTCAACCCCC 60.134 57.143 0.00 0.00 38.92 5.40
3117 11771 6.355638 CGACTCAAGACAACAACAAGATAAC 58.644 40.000 0.00 0.00 0.00 1.89
3118 11772 5.050363 GCGACTCAAGACAACAACAAGATAA 60.050 40.000 0.00 0.00 0.00 1.75
3119 11773 4.447724 GCGACTCAAGACAACAACAAGATA 59.552 41.667 0.00 0.00 0.00 1.98
3120 11774 3.248602 GCGACTCAAGACAACAACAAGAT 59.751 43.478 0.00 0.00 0.00 2.40
3121 11775 2.607635 GCGACTCAAGACAACAACAAGA 59.392 45.455 0.00 0.00 0.00 3.02
3122 11776 2.597505 CGCGACTCAAGACAACAACAAG 60.598 50.000 0.00 0.00 0.00 3.16
3123 11777 1.326245 CGCGACTCAAGACAACAACAA 59.674 47.619 0.00 0.00 0.00 2.83
3125 11779 1.205657 TCGCGACTCAAGACAACAAC 58.794 50.000 3.71 0.00 0.00 3.32
3128 11782 3.184581 AGAAAATCGCGACTCAAGACAAC 59.815 43.478 12.93 0.00 0.00 3.32
3137 11791 0.736325 CCGACCAGAAAATCGCGACT 60.736 55.000 12.93 0.00 37.01 4.18
3151 11805 4.295119 ACGCACACCAGACCGACC 62.295 66.667 0.00 0.00 0.00 4.79
3156 11810 4.927782 TGCCCACGCACACCAGAC 62.928 66.667 0.00 0.00 41.12 3.51
3168 11822 1.378911 GAGTGACCATGCATGCCCA 60.379 57.895 21.69 16.77 0.00 5.36
3172 11826 2.079158 ACGAAAGAGTGACCATGCATG 58.921 47.619 20.19 20.19 0.00 4.06
3266 12134 4.852134 TGATGAAACAAATGTGACTGGG 57.148 40.909 0.00 0.00 0.00 4.45
3271 12139 8.890124 AAACAATGATGATGAAACAAATGTGA 57.110 26.923 0.00 0.00 0.00 3.58
3272 12140 8.984764 AGAAACAATGATGATGAAACAAATGTG 58.015 29.630 0.00 0.00 0.00 3.21
3273 12141 9.550406 AAGAAACAATGATGATGAAACAAATGT 57.450 25.926 0.00 0.00 0.00 2.71
3276 12144 9.820725 AGAAAGAAACAATGATGATGAAACAAA 57.179 25.926 0.00 0.00 0.00 2.83
3277 12145 9.820725 AAGAAAGAAACAATGATGATGAAACAA 57.179 25.926 0.00 0.00 0.00 2.83
3281 12149 9.687210 CAGAAAGAAAGAAACAATGATGATGAA 57.313 29.630 0.00 0.00 0.00 2.57
3329 12197 1.021202 CGCTCTGGGTGACAAAACAA 58.979 50.000 0.00 0.00 0.00 2.83
3330 12198 1.444119 GCGCTCTGGGTGACAAAACA 61.444 55.000 0.00 0.00 0.00 2.83
3331 12199 1.166531 AGCGCTCTGGGTGACAAAAC 61.167 55.000 2.64 0.00 0.00 2.43
3335 12203 2.324014 AAACAGCGCTCTGGGTGACA 62.324 55.000 7.13 0.00 44.54 3.58
3336 12204 1.569479 GAAACAGCGCTCTGGGTGAC 61.569 60.000 7.13 0.00 44.54 3.67
3338 12206 0.037326 TAGAAACAGCGCTCTGGGTG 60.037 55.000 7.13 0.00 44.54 4.61
3339 12207 0.247736 CTAGAAACAGCGCTCTGGGT 59.752 55.000 7.13 0.00 44.54 4.51
3340 12208 1.086634 GCTAGAAACAGCGCTCTGGG 61.087 60.000 7.13 0.00 44.54 4.45
3341 12209 1.086634 GGCTAGAAACAGCGCTCTGG 61.087 60.000 7.13 4.98 44.54 3.86
3342 12210 1.416813 CGGCTAGAAACAGCGCTCTG 61.417 60.000 7.13 1.19 42.76 3.35
3343 12211 1.153745 CGGCTAGAAACAGCGCTCT 60.154 57.895 7.13 4.13 42.76 4.09
3346 12267 2.125673 TCCGGCTAGAAACAGCGC 60.126 61.111 0.00 0.00 42.76 5.92
3347 12268 2.158959 CGTCCGGCTAGAAACAGCG 61.159 63.158 0.00 0.00 42.76 5.18
3365 12286 0.109132 CCATTTCTGTTCCTTGCGCC 60.109 55.000 4.18 0.00 0.00 6.53
3369 12290 5.300286 ACAAAGAGACCATTTCTGTTCCTTG 59.700 40.000 0.00 0.00 36.83 3.61
3386 12308 0.040067 GCAAAGCGTCCCACAAAGAG 60.040 55.000 0.00 0.00 0.00 2.85
3389 12311 1.733402 CTGGCAAAGCGTCCCACAAA 61.733 55.000 0.00 0.00 0.00 2.83
3390 12312 2.124109 TGGCAAAGCGTCCCACAA 60.124 55.556 0.00 0.00 0.00 3.33
3391 12313 2.594303 CTGGCAAAGCGTCCCACA 60.594 61.111 0.00 0.00 0.00 4.17
3392 12314 2.281484 TCTGGCAAAGCGTCCCAC 60.281 61.111 0.00 0.00 0.00 4.61
3393 12315 2.281484 GTCTGGCAAAGCGTCCCA 60.281 61.111 0.00 0.00 0.00 4.37
3394 12316 1.896660 TTGTCTGGCAAAGCGTCCC 60.897 57.895 0.00 0.00 33.53 4.46
3396 12318 1.282875 GGTTGTCTGGCAAAGCGTC 59.717 57.895 0.00 0.00 39.03 5.19
3397 12319 1.034838 TTGGTTGTCTGGCAAAGCGT 61.035 50.000 0.00 0.00 39.03 5.07
3398 12320 0.594796 GTTGGTTGTCTGGCAAAGCG 60.595 55.000 0.00 0.00 39.03 4.68
3399 12321 0.249447 GGTTGGTTGTCTGGCAAAGC 60.249 55.000 0.00 0.00 39.03 3.51
3401 12323 1.561643 TTGGTTGGTTGTCTGGCAAA 58.438 45.000 0.00 0.00 39.03 3.68
3405 12327 5.768164 ACTAGTATTTTGGTTGGTTGTCTGG 59.232 40.000 0.00 0.00 0.00 3.86
3406 12328 6.877611 ACTAGTATTTTGGTTGGTTGTCTG 57.122 37.500 0.00 0.00 0.00 3.51
3407 12329 7.446319 GGTAACTAGTATTTTGGTTGGTTGTCT 59.554 37.037 0.00 0.00 0.00 3.41
3408 12330 7.587629 GGTAACTAGTATTTTGGTTGGTTGTC 58.412 38.462 0.00 0.00 0.00 3.18
3409 12331 7.514784 GGTAACTAGTATTTTGGTTGGTTGT 57.485 36.000 0.00 0.00 0.00 3.32
3426 12348 3.210098 AGGCCAAAGGGTAGGTAACTA 57.790 47.619 5.01 0.00 40.98 2.24
3427 12349 2.055246 AGGCCAAAGGGTAGGTAACT 57.945 50.000 5.01 0.00 43.08 2.24
3430 12352 1.272258 GCAAAGGCCAAAGGGTAGGTA 60.272 52.381 5.01 0.00 36.17 3.08
3431 12353 0.541998 GCAAAGGCCAAAGGGTAGGT 60.542 55.000 5.01 0.00 36.17 3.08
3432 12354 0.541764 TGCAAAGGCCAAAGGGTAGG 60.542 55.000 5.01 0.00 40.13 3.18
3433 12355 1.560505 ATGCAAAGGCCAAAGGGTAG 58.439 50.000 5.01 0.00 40.13 3.18
3435 12357 1.266178 GTATGCAAAGGCCAAAGGGT 58.734 50.000 5.01 0.00 40.13 4.34
3436 12358 1.265236 TGTATGCAAAGGCCAAAGGG 58.735 50.000 5.01 0.00 40.13 3.95
3437 12359 3.953612 TCTATGTATGCAAAGGCCAAAGG 59.046 43.478 5.01 0.00 40.13 3.11
3438 12360 5.581126 TTCTATGTATGCAAAGGCCAAAG 57.419 39.130 5.01 0.00 40.13 2.77
3439 12361 5.991933 TTTCTATGTATGCAAAGGCCAAA 57.008 34.783 5.01 0.00 40.13 3.28
3440 12362 5.991933 TTTTCTATGTATGCAAAGGCCAA 57.008 34.783 5.01 0.00 40.13 4.52
3443 12365 6.749118 CAGTCTTTTTCTATGTATGCAAAGGC 59.251 38.462 0.00 0.00 41.68 4.35
3444 12366 7.094205 ACCAGTCTTTTTCTATGTATGCAAAGG 60.094 37.037 0.00 0.00 0.00 3.11
3446 12368 7.309133 CCACCAGTCTTTTTCTATGTATGCAAA 60.309 37.037 0.00 0.00 0.00 3.68
3448 12370 5.647658 CCACCAGTCTTTTTCTATGTATGCA 59.352 40.000 0.00 0.00 0.00 3.96
3449 12371 5.880332 TCCACCAGTCTTTTTCTATGTATGC 59.120 40.000 0.00 0.00 0.00 3.14
3453 12375 6.039382 GTGTTTCCACCAGTCTTTTTCTATGT 59.961 38.462 0.00 0.00 35.44 2.29
3454 12376 6.039270 TGTGTTTCCACCAGTCTTTTTCTATG 59.961 38.462 0.00 0.00 41.09 2.23
3466 12388 3.510719 CAAACACTTGTGTTTCCACCAG 58.489 45.455 23.74 11.59 39.68 4.00
3468 12390 2.232696 ACCAAACACTTGTGTTTCCACC 59.767 45.455 23.74 0.00 39.68 4.61
3469 12391 3.586100 ACCAAACACTTGTGTTTCCAC 57.414 42.857 23.74 0.00 39.68 4.02
3471 12393 2.670905 GCAACCAAACACTTGTGTTTCC 59.329 45.455 23.74 10.19 39.68 3.13
3481 13477 2.378445 ACCAAAGTGCAACCAAACAC 57.622 45.000 0.00 0.00 37.80 3.32
3484 13480 1.677217 GCCAACCAAAGTGCAACCAAA 60.677 47.619 0.00 0.00 37.80 3.28
3494 13490 1.203052 CTAGCACCATGCCAACCAAAG 59.797 52.381 0.00 0.00 46.52 2.77
3495 13491 1.255882 CTAGCACCATGCCAACCAAA 58.744 50.000 0.00 0.00 46.52 3.28
3496 13492 0.112218 ACTAGCACCATGCCAACCAA 59.888 50.000 0.00 0.00 46.52 3.67
3497 13493 0.988063 TACTAGCACCATGCCAACCA 59.012 50.000 0.00 0.00 46.52 3.67
3499 13495 4.073293 ACTATACTAGCACCATGCCAAC 57.927 45.455 0.00 0.00 46.52 3.77
3501 13497 5.127194 GCTATACTATACTAGCACCATGCCA 59.873 44.000 0.00 0.00 46.52 4.92
3502 13498 5.127194 TGCTATACTATACTAGCACCATGCC 59.873 44.000 0.36 0.00 46.52 4.40
3503 13499 6.208988 TGCTATACTATACTAGCACCATGC 57.791 41.667 0.36 0.00 43.97 4.06
3509 13505 6.135819 TCCCAGTGCTATACTATACTAGCA 57.864 41.667 0.36 0.36 45.99 3.49
3510 13506 7.648039 AATCCCAGTGCTATACTATACTAGC 57.352 40.000 0.00 0.00 37.60 3.42
3511 13507 8.688151 GGAAATCCCAGTGCTATACTATACTAG 58.312 40.741 0.00 0.00 37.60 2.57
3512 13508 8.591114 GGAAATCCCAGTGCTATACTATACTA 57.409 38.462 0.00 0.00 37.60 1.82
3533 13529 1.679153 GCACTCCGTTTCAAAGGGAAA 59.321 47.619 12.58 0.00 44.14 3.13
3534 13530 1.314730 GCACTCCGTTTCAAAGGGAA 58.685 50.000 12.58 0.00 44.14 3.97
3536 13532 0.821711 TGGCACTCCGTTTCAAAGGG 60.822 55.000 2.13 2.13 37.77 3.95
3537 13533 1.028905 TTGGCACTCCGTTTCAAAGG 58.971 50.000 0.00 0.00 34.14 3.11
3538 13534 1.676006 AGTTGGCACTCCGTTTCAAAG 59.324 47.619 0.00 0.00 34.14 2.77
3544 13540 2.522185 TCTACTAGTTGGCACTCCGTT 58.478 47.619 0.00 0.00 34.06 4.44
3548 13544 3.263261 GCCTTTCTACTAGTTGGCACTC 58.737 50.000 0.00 0.00 40.04 3.51
3550 13546 2.000447 CGCCTTTCTACTAGTTGGCAC 59.000 52.381 0.00 0.00 40.27 5.01
3551 13547 1.674817 GCGCCTTTCTACTAGTTGGCA 60.675 52.381 0.00 0.00 40.27 4.92
3555 13551 0.175073 CGGGCGCCTTTCTACTAGTT 59.825 55.000 28.56 0.00 0.00 2.24
3560 13556 2.818274 CCACGGGCGCCTTTCTAC 60.818 66.667 28.56 7.30 0.00 2.59
3564 13560 4.572571 TTGACCACGGGCGCCTTT 62.573 61.111 28.56 10.88 0.00 3.11
3571 13567 0.673644 GTGATCCAGTTGACCACGGG 60.674 60.000 0.00 0.00 41.98 5.28
3572 13568 0.321671 AGTGATCCAGTTGACCACGG 59.678 55.000 0.00 0.00 33.37 4.94
3573 13569 1.714794 GAGTGATCCAGTTGACCACG 58.285 55.000 0.00 0.00 33.37 4.94
3574 13570 1.673033 CCGAGTGATCCAGTTGACCAC 60.673 57.143 0.00 0.00 0.00 4.16
3575 13571 0.608130 CCGAGTGATCCAGTTGACCA 59.392 55.000 0.00 0.00 0.00 4.02
3577 13573 2.457366 AACCGAGTGATCCAGTTGAC 57.543 50.000 0.00 0.00 0.00 3.18
3578 13574 2.766313 CAAACCGAGTGATCCAGTTGA 58.234 47.619 0.00 0.00 0.00 3.18
3580 13576 1.523758 GCAAACCGAGTGATCCAGTT 58.476 50.000 0.00 0.00 0.00 3.16
3581 13577 0.670546 CGCAAACCGAGTGATCCAGT 60.671 55.000 0.00 0.00 40.02 4.00
3582 13578 0.670546 ACGCAAACCGAGTGATCCAG 60.671 55.000 0.00 0.00 41.02 3.86
3589 13585 0.814010 AAAGAGCACGCAAACCGAGT 60.814 50.000 0.00 0.00 41.02 4.18
3591 13587 0.812014 TCAAAGAGCACGCAAACCGA 60.812 50.000 0.00 0.00 41.02 4.69
3594 13590 2.975851 CTGAATCAAAGAGCACGCAAAC 59.024 45.455 0.00 0.00 0.00 2.93
3596 13592 1.069022 GCTGAATCAAAGAGCACGCAA 60.069 47.619 0.00 0.00 32.70 4.85
3598 13594 0.518636 TGCTGAATCAAAGAGCACGC 59.481 50.000 0.00 0.00 37.81 5.34
3601 13597 2.168326 TCGTGCTGAATCAAAGAGCA 57.832 45.000 0.00 0.00 40.40 4.26
3602 13598 3.229552 GTTTCGTGCTGAATCAAAGAGC 58.770 45.455 0.00 0.00 36.22 4.09
3603 13599 4.472691 TGTTTCGTGCTGAATCAAAGAG 57.527 40.909 1.99 0.00 36.22 2.85
3604 13600 4.789481 GCTTGTTTCGTGCTGAATCAAAGA 60.789 41.667 13.19 0.00 42.64 2.52
3605 13601 3.423206 GCTTGTTTCGTGCTGAATCAAAG 59.577 43.478 13.19 9.23 42.64 2.77
3606 13602 3.181492 TGCTTGTTTCGTGCTGAATCAAA 60.181 39.130 13.19 2.49 42.64 2.69
3607 13603 2.357323 TGCTTGTTTCGTGCTGAATCAA 59.643 40.909 12.21 12.21 41.61 2.57
3608 13604 1.946081 TGCTTGTTTCGTGCTGAATCA 59.054 42.857 0.00 0.00 36.22 2.57
3610 13606 3.066621 TCTTTGCTTGTTTCGTGCTGAAT 59.933 39.130 0.00 0.00 36.22 2.57
3611 13607 2.421775 TCTTTGCTTGTTTCGTGCTGAA 59.578 40.909 0.00 0.00 33.85 3.02
3612 13608 2.013400 TCTTTGCTTGTTTCGTGCTGA 58.987 42.857 0.00 0.00 0.00 4.26
3613 13609 2.473530 TCTTTGCTTGTTTCGTGCTG 57.526 45.000 0.00 0.00 0.00 4.41
3614 13610 2.880890 AGATCTTTGCTTGTTTCGTGCT 59.119 40.909 0.00 0.00 0.00 4.40
3615 13611 3.273919 AGATCTTTGCTTGTTTCGTGC 57.726 42.857 0.00 0.00 0.00 5.34
3619 13615 4.762251 ACACCCTAGATCTTTGCTTGTTTC 59.238 41.667 0.00 0.00 0.00 2.78
3623 13619 2.932614 CGACACCCTAGATCTTTGCTTG 59.067 50.000 0.00 0.00 0.00 4.01
3627 13624 3.254060 CACACGACACCCTAGATCTTTG 58.746 50.000 0.00 0.00 0.00 2.77
3629 13626 2.492484 GACACACGACACCCTAGATCTT 59.508 50.000 0.00 0.00 0.00 2.40
3631 13628 2.093106 AGACACACGACACCCTAGATC 58.907 52.381 0.00 0.00 0.00 2.75
3646 13661 1.312815 AGCCAAGCAAACAGAGACAC 58.687 50.000 0.00 0.00 0.00 3.67
3686 13869 4.027437 AGAAAGGAAGGTAGTCTAGCCAG 58.973 47.826 5.44 0.00 0.00 4.85
3691 13874 4.595781 TGCCAAAGAAAGGAAGGTAGTCTA 59.404 41.667 0.00 0.00 0.00 2.59
3692 13875 3.394606 TGCCAAAGAAAGGAAGGTAGTCT 59.605 43.478 0.00 0.00 0.00 3.24
3702 13885 4.696455 AGAAACAACATGCCAAAGAAAGG 58.304 39.130 0.00 0.00 0.00 3.11
3756 13939 4.516365 AGAAAGAGCATGGCAAAGAAAG 57.484 40.909 0.00 0.00 0.00 2.62
3790 14105 4.647611 TGGTTTTCCACACTACCATAGTG 58.352 43.478 13.25 13.25 46.34 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.