Multiple sequence alignment - TraesCS1A01G437100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G437100 chr1A 100.000 3020 0 0 1 3020 586924567 586921548 0.000000e+00 5578.0
1 TraesCS1A01G437100 chr1A 81.943 2038 297 49 57 2039 586332539 586330518 0.000000e+00 1659.0
2 TraesCS1A01G437100 chr1A 81.560 2077 310 45 3 2016 586518574 586516508 0.000000e+00 1646.0
3 TraesCS1A01G437100 chr1A 80.306 1960 313 39 104 2017 586410123 586408191 0.000000e+00 1413.0
4 TraesCS1A01G437100 chr1A 81.602 1598 211 49 57 1602 586362289 586360723 0.000000e+00 1245.0
5 TraesCS1A01G437100 chr1A 78.377 2021 348 58 49 2009 586316233 586314242 0.000000e+00 1229.0
6 TraesCS1A01G437100 chr1A 79.549 1819 277 59 1 1747 586712547 586710752 0.000000e+00 1210.0
7 TraesCS1A01G437100 chr1A 78.468 1723 294 46 348 2017 586381336 586379638 0.000000e+00 1055.0
8 TraesCS1A01G437100 chr1A 80.658 243 35 10 2776 3008 586515855 586515615 8.600000e-41 178.0
9 TraesCS1A01G437100 chr1A 76.159 302 50 14 2047 2327 586710411 586710111 4.060000e-29 139.0
10 TraesCS1A01G437100 chr1D 84.064 2052 281 26 3 2017 488484107 488486149 0.000000e+00 1936.0
11 TraesCS1A01G437100 chr1D 82.628 2078 286 45 1 2017 487896037 487893974 0.000000e+00 1768.0
12 TraesCS1A01G437100 chr1D 78.051 1991 353 53 111 2041 487840158 487838192 0.000000e+00 1179.0
13 TraesCS1A01G437100 chr1D 100.000 28 0 0 2900 2927 487893271 487893244 5.000000e-03 52.8
14 TraesCS1A01G437100 chrUn 83.740 2048 287 28 6 2017 8844783 8842746 0.000000e+00 1895.0
15 TraesCS1A01G437100 chr1B 82.596 2080 299 37 1 2023 679709253 679707180 0.000000e+00 1777.0
16 TraesCS1A01G437100 chr1B 80.071 1967 321 43 102 2017 679700332 679698386 0.000000e+00 1395.0
17 TraesCS1A01G437100 chr4A 74.960 1877 350 84 131 1927 729706908 729708744 0.000000e+00 752.0
18 TraesCS1A01G437100 chr4A 74.469 1884 378 73 122 1936 718927473 718925624 0.000000e+00 719.0
19 TraesCS1A01G437100 chr4A 75.802 748 116 35 552 1260 730067390 730066669 4.860000e-83 318.0
20 TraesCS1A01G437100 chr4A 73.733 868 194 29 1080 1927 729747110 729747963 2.920000e-80 309.0
21 TraesCS1A01G437100 chr4A 73.272 868 195 30 1080 1927 729148430 729149280 1.770000e-72 283.0
22 TraesCS1A01G437100 chr7D 73.742 636 141 23 1080 1699 10047553 10048178 3.030000e-55 226.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G437100 chr1A 586921548 586924567 3019 True 5578.0 5578 100.000 1 3020 1 chr1A.!!$R6 3019
1 TraesCS1A01G437100 chr1A 586330518 586332539 2021 True 1659.0 1659 81.943 57 2039 1 chr1A.!!$R2 1982
2 TraesCS1A01G437100 chr1A 586408191 586410123 1932 True 1413.0 1413 80.306 104 2017 1 chr1A.!!$R5 1913
3 TraesCS1A01G437100 chr1A 586360723 586362289 1566 True 1245.0 1245 81.602 57 1602 1 chr1A.!!$R3 1545
4 TraesCS1A01G437100 chr1A 586314242 586316233 1991 True 1229.0 1229 78.377 49 2009 1 chr1A.!!$R1 1960
5 TraesCS1A01G437100 chr1A 586379638 586381336 1698 True 1055.0 1055 78.468 348 2017 1 chr1A.!!$R4 1669
6 TraesCS1A01G437100 chr1A 586515615 586518574 2959 True 912.0 1646 81.109 3 3008 2 chr1A.!!$R7 3005
7 TraesCS1A01G437100 chr1A 586710111 586712547 2436 True 674.5 1210 77.854 1 2327 2 chr1A.!!$R8 2326
8 TraesCS1A01G437100 chr1D 488484107 488486149 2042 False 1936.0 1936 84.064 3 2017 1 chr1D.!!$F1 2014
9 TraesCS1A01G437100 chr1D 487838192 487840158 1966 True 1179.0 1179 78.051 111 2041 1 chr1D.!!$R1 1930
10 TraesCS1A01G437100 chr1D 487893244 487896037 2793 True 910.4 1768 91.314 1 2927 2 chr1D.!!$R2 2926
11 TraesCS1A01G437100 chrUn 8842746 8844783 2037 True 1895.0 1895 83.740 6 2017 1 chrUn.!!$R1 2011
12 TraesCS1A01G437100 chr1B 679707180 679709253 2073 True 1777.0 1777 82.596 1 2023 1 chr1B.!!$R2 2022
13 TraesCS1A01G437100 chr1B 679698386 679700332 1946 True 1395.0 1395 80.071 102 2017 1 chr1B.!!$R1 1915
14 TraesCS1A01G437100 chr4A 729706908 729708744 1836 False 752.0 752 74.960 131 1927 1 chr4A.!!$F2 1796
15 TraesCS1A01G437100 chr4A 718925624 718927473 1849 True 719.0 719 74.469 122 1936 1 chr4A.!!$R1 1814
16 TraesCS1A01G437100 chr4A 730066669 730067390 721 True 318.0 318 75.802 552 1260 1 chr4A.!!$R2 708
17 TraesCS1A01G437100 chr4A 729747110 729747963 853 False 309.0 309 73.733 1080 1927 1 chr4A.!!$F3 847
18 TraesCS1A01G437100 chr4A 729148430 729149280 850 False 283.0 283 73.272 1080 1927 1 chr4A.!!$F1 847
19 TraesCS1A01G437100 chr7D 10047553 10048178 625 False 226.0 226 73.742 1080 1699 1 chr7D.!!$F1 619

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
184 189 2.744166 CGATGTGTGGGATGAATCAGCT 60.744 50.0 0.00 0.0 0.00 4.24 F
1202 1261 0.107654 GAGACGCTGGCCATACCTTT 60.108 55.0 5.51 0.0 40.22 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1975 2121 0.179048 TGCACTGATAAGGCATCCCG 60.179 55.0 0.0 0.0 35.76 5.14 R
2800 3291 0.162507 CTCGTTTTCAGAGCACAGCG 59.837 55.0 0.0 0.0 0.00 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 65 8.352942 CCATATATCCTTTTTGCTTGAACCTAC 58.647 37.037 0.00 0.00 0.00 3.18
92 95 9.430838 GTCAAGATTTTGATGATTTCGTCTATG 57.569 33.333 1.53 0.00 44.62 2.23
94 97 9.992910 CAAGATTTTGATGATTTCGTCTATGAA 57.007 29.630 1.78 0.00 36.36 2.57
184 189 2.744166 CGATGTGTGGGATGAATCAGCT 60.744 50.000 0.00 0.00 0.00 4.24
253 258 9.658799 AGTAGAGTAATAGTTACAACACGAGTA 57.341 33.333 0.00 0.00 38.60 2.59
262 267 5.532406 AGTTACAACACGAGTAGAAGGTGTA 59.468 40.000 0.00 0.00 43.59 2.90
267 272 4.525024 ACACGAGTAGAAGGTGTAGCTAT 58.475 43.478 0.00 0.00 42.65 2.97
366 371 6.349300 TCTTGAATAGAGTATTTGGGTCTGC 58.651 40.000 0.00 0.00 0.00 4.26
787 796 6.544931 TGATTCAGCCTTATGAAAATGAGGAG 59.455 38.462 0.99 0.00 42.21 3.69
826 838 3.254060 AGTACACGACATGATGCTTGAC 58.746 45.455 0.00 0.00 0.00 3.18
928 956 4.390264 TCGTCGATTATCTCTGACATCCT 58.610 43.478 0.00 0.00 31.76 3.24
943 983 3.424703 ACATCCTTTGTTGGTGATGGAG 58.575 45.455 0.00 0.00 39.08 3.86
982 1026 5.295292 AGCCTATCACAAGTTCGATCATTTG 59.705 40.000 0.00 0.00 0.00 2.32
989 1033 4.153986 CAAGTTCGATCATTTGCACTGTC 58.846 43.478 0.00 0.00 0.00 3.51
1067 1120 3.527507 TCAGGACAGTTCTAGTGGAGT 57.472 47.619 0.00 0.00 0.00 3.85
1073 1126 2.834549 ACAGTTCTAGTGGAGTCATGGG 59.165 50.000 0.00 0.00 0.00 4.00
1096 1149 1.065418 CCCTTGACCTCACCGCTATTT 60.065 52.381 0.00 0.00 0.00 1.40
1138 1197 8.033038 TGAGGTACTTGTATGTTTCAGTATCAC 58.967 37.037 0.00 0.00 41.55 3.06
1155 1214 0.317160 CACGTCTTGTACAGCTCCCA 59.683 55.000 0.00 0.00 0.00 4.37
1202 1261 0.107654 GAGACGCTGGCCATACCTTT 60.108 55.000 5.51 0.00 40.22 3.11
1264 1326 4.705507 TGTCTCGCTTGTCCTATCTTAGTT 59.294 41.667 0.00 0.00 0.00 2.24
1335 1414 7.333672 TCACTACGCAGTCTGATAATATATCGT 59.666 37.037 3.32 2.95 43.93 3.73
1336 1415 8.601476 CACTACGCAGTCTGATAATATATCGTA 58.399 37.037 3.32 3.98 43.93 3.43
1349 1446 9.477484 GATAATATATCGTATGGTGACCAATCC 57.523 37.037 9.06 0.00 36.95 3.01
1361 1473 0.749454 ACCAATCCGAGCATGAAGGC 60.749 55.000 0.00 0.00 0.00 4.35
1383 1495 0.618458 TTATGGGTCTTGGCGAGCTT 59.382 50.000 0.00 0.00 40.01 3.74
1422 1537 5.253096 ACTGGTAATCTATGTGGGGTCTTTT 59.747 40.000 0.00 0.00 0.00 2.27
1451 1566 3.006752 CCAAAACTTGATGCTTTGGCCTA 59.993 43.478 3.32 0.00 42.64 3.93
1462 1577 2.369394 CTTTGGCCTACTCCATTGGAC 58.631 52.381 3.32 0.00 35.77 4.02
1562 1689 6.925610 TCCTTTTCAACATATCGAGGAATG 57.074 37.500 0.00 0.00 0.00 2.67
1586 1716 3.013921 GCGGGTCTGTATTGAATTTCCA 58.986 45.455 0.00 0.00 0.00 3.53
1715 1852 6.544564 TCCCTCGTCAAACTTGAATTTAGTTT 59.455 34.615 11.66 11.66 44.38 2.66
1723 1860 7.623268 AAACTTGAATTTAGTTTGTCGCATC 57.377 32.000 15.00 0.00 42.54 3.91
1788 1925 3.141398 TCTGGAGCACTTCACATTTCAC 58.859 45.455 0.00 0.00 0.00 3.18
1791 1928 3.141398 GGAGCACTTCACATTTCACTCA 58.859 45.455 0.00 0.00 0.00 3.41
1821 1958 5.078683 ACATTATGGCATACCTGGGATTT 57.921 39.130 6.72 0.00 36.63 2.17
1822 1959 5.079643 ACATTATGGCATACCTGGGATTTC 58.920 41.667 6.72 0.00 36.63 2.17
1939 2079 6.127225 CCTCCAGAAGATCAAACTGTATCAGA 60.127 42.308 3.70 0.00 35.18 3.27
1975 2121 0.958822 AACCATGGTTTCTGCGTTCC 59.041 50.000 24.86 0.00 34.22 3.62
2065 2520 3.515602 AGAGTTTTGTGGAAGGCTCAT 57.484 42.857 0.00 0.00 0.00 2.90
2071 2526 4.864704 TTTGTGGAAGGCTCATTTTACC 57.135 40.909 0.00 0.00 0.00 2.85
2073 2528 3.420893 TGTGGAAGGCTCATTTTACCTG 58.579 45.455 0.00 0.00 32.92 4.00
2075 2530 4.042311 TGTGGAAGGCTCATTTTACCTGTA 59.958 41.667 0.00 0.00 32.92 2.74
2081 2536 4.137543 GGCTCATTTTACCTGTATCCTGG 58.862 47.826 0.00 0.00 35.86 4.45
2083 2538 5.456763 GGCTCATTTTACCTGTATCCTGGAT 60.457 44.000 14.66 14.66 34.02 3.41
2096 2551 0.477204 CCTGGATCAGGTGATGGCAT 59.523 55.000 0.00 0.00 45.82 4.40
2153 2616 5.885230 TTAGCTGTTGGATGATCAACTTG 57.115 39.130 0.00 4.01 45.15 3.16
2157 2620 4.619863 GCTGTTGGATGATCAACTTGCAAT 60.620 41.667 0.00 0.00 45.15 3.56
2166 2629 8.385111 GGATGATCAACTTGCAATTTATGTTTG 58.615 33.333 0.00 0.00 0.00 2.93
2172 2635 7.865385 TCAACTTGCAATTTATGTTTGGAGTAC 59.135 33.333 0.00 0.00 0.00 2.73
2173 2636 6.378582 ACTTGCAATTTATGTTTGGAGTACG 58.621 36.000 0.00 0.00 0.00 3.67
2182 2645 9.974980 ATTTATGTTTGGAGTACGAAAATTTGT 57.025 25.926 0.00 0.00 0.00 2.83
2190 2653 6.128769 TGGAGTACGAAAATTTGTGATGTACG 60.129 38.462 0.00 0.00 36.67 3.67
2191 2654 6.128742 GGAGTACGAAAATTTGTGATGTACGT 60.129 38.462 0.00 0.00 36.67 3.57
2194 2657 9.571810 AGTACGAAAATTTGTGATGTACGTATA 57.428 29.630 0.00 0.00 36.67 1.47
2213 2676 8.905103 ACGTATAATTACCATTTGCTTTTGTC 57.095 30.769 0.00 0.00 0.00 3.18
2249 2724 6.484364 TGTTGCTAGTCATGGATCTGAATA 57.516 37.500 0.00 0.00 0.00 1.75
2255 2730 8.093307 TGCTAGTCATGGATCTGAATAAGAATC 58.907 37.037 0.00 0.00 38.79 2.52
2262 2737 9.049523 CATGGATCTGAATAAGAATCGAGAAAA 57.950 33.333 0.00 0.00 38.79 2.29
2263 2738 8.425577 TGGATCTGAATAAGAATCGAGAAAAC 57.574 34.615 0.00 0.00 38.79 2.43
2266 2741 8.777865 ATCTGAATAAGAATCGAGAAAACACA 57.222 30.769 0.00 0.00 38.79 3.72
2267 2742 8.018677 TCTGAATAAGAATCGAGAAAACACAC 57.981 34.615 0.00 0.00 29.54 3.82
2268 2743 7.655732 TCTGAATAAGAATCGAGAAAACACACA 59.344 33.333 0.00 0.00 29.54 3.72
2274 2750 7.490962 AGAATCGAGAAAACACACATGTAAA 57.509 32.000 0.00 0.00 38.45 2.01
2290 2766 7.490079 ACACATGTAAAATGCAGCAATCATTAG 59.510 33.333 0.00 0.00 34.09 1.73
2291 2767 7.490079 CACATGTAAAATGCAGCAATCATTAGT 59.510 33.333 0.00 0.00 34.09 2.24
2294 2770 7.475015 TGTAAAATGCAGCAATCATTAGTCTC 58.525 34.615 0.00 0.00 34.09 3.36
2305 2781 6.529125 GCAATCATTAGTCTCATGTTGGTTTG 59.471 38.462 0.00 0.00 0.00 2.93
2309 2785 3.576078 AGTCTCATGTTGGTTTGGTCA 57.424 42.857 0.00 0.00 0.00 4.02
2313 2789 2.892852 CTCATGTTGGTTTGGTCATGGT 59.107 45.455 0.00 0.00 38.39 3.55
2327 2803 0.659427 CATGGTCATAGTTGCTGCCG 59.341 55.000 0.00 0.00 0.00 5.69
2328 2804 0.253044 ATGGTCATAGTTGCTGCCGT 59.747 50.000 0.00 0.00 0.00 5.68
2329 2805 0.391130 TGGTCATAGTTGCTGCCGTC 60.391 55.000 0.00 0.00 0.00 4.79
2330 2806 0.391130 GGTCATAGTTGCTGCCGTCA 60.391 55.000 0.00 0.00 0.00 4.35
2331 2807 1.438651 GTCATAGTTGCTGCCGTCAA 58.561 50.000 0.00 0.00 0.00 3.18
2332 2808 2.009774 GTCATAGTTGCTGCCGTCAAT 58.990 47.619 0.00 0.00 0.00 2.57
2333 2809 2.009051 TCATAGTTGCTGCCGTCAATG 58.991 47.619 0.00 0.00 0.00 2.82
2334 2810 2.009051 CATAGTTGCTGCCGTCAATGA 58.991 47.619 0.00 0.00 0.00 2.57
2335 2811 2.401583 TAGTTGCTGCCGTCAATGAT 57.598 45.000 0.00 0.00 0.00 2.45
2336 2812 2.401583 AGTTGCTGCCGTCAATGATA 57.598 45.000 0.00 0.00 0.00 2.15
2337 2813 2.009774 AGTTGCTGCCGTCAATGATAC 58.990 47.619 0.00 0.00 0.00 2.24
2338 2814 2.009774 GTTGCTGCCGTCAATGATACT 58.990 47.619 0.00 0.00 0.00 2.12
2339 2815 1.939974 TGCTGCCGTCAATGATACTC 58.060 50.000 0.00 0.00 0.00 2.59
2340 2816 1.206849 TGCTGCCGTCAATGATACTCA 59.793 47.619 0.00 0.00 0.00 3.41
2341 2817 1.594862 GCTGCCGTCAATGATACTCAC 59.405 52.381 0.00 0.00 0.00 3.51
2342 2818 2.739932 GCTGCCGTCAATGATACTCACT 60.740 50.000 0.00 0.00 0.00 3.41
2343 2819 3.525537 CTGCCGTCAATGATACTCACTT 58.474 45.455 0.00 0.00 0.00 3.16
2344 2820 3.521560 TGCCGTCAATGATACTCACTTC 58.478 45.455 0.00 0.00 0.00 3.01
2345 2821 2.866762 GCCGTCAATGATACTCACTTCC 59.133 50.000 0.00 0.00 0.00 3.46
2346 2822 3.430929 GCCGTCAATGATACTCACTTCCT 60.431 47.826 0.00 0.00 0.00 3.36
2347 2823 4.115516 CCGTCAATGATACTCACTTCCTG 58.884 47.826 0.00 0.00 0.00 3.86
2348 2824 3.553511 CGTCAATGATACTCACTTCCTGC 59.446 47.826 0.00 0.00 0.00 4.85
2349 2825 3.873952 GTCAATGATACTCACTTCCTGCC 59.126 47.826 0.00 0.00 0.00 4.85
2350 2826 3.519107 TCAATGATACTCACTTCCTGCCA 59.481 43.478 0.00 0.00 0.00 4.92
2351 2827 4.164796 TCAATGATACTCACTTCCTGCCAT 59.835 41.667 0.00 0.00 0.00 4.40
2352 2828 5.366477 TCAATGATACTCACTTCCTGCCATA 59.634 40.000 0.00 0.00 0.00 2.74
2353 2829 6.043590 TCAATGATACTCACTTCCTGCCATAT 59.956 38.462 0.00 0.00 0.00 1.78
2354 2830 5.894298 TGATACTCACTTCCTGCCATATT 57.106 39.130 0.00 0.00 0.00 1.28
2355 2831 6.252599 TGATACTCACTTCCTGCCATATTT 57.747 37.500 0.00 0.00 0.00 1.40
2356 2832 6.057533 TGATACTCACTTCCTGCCATATTTG 58.942 40.000 0.00 0.00 0.00 2.32
2357 2833 4.574674 ACTCACTTCCTGCCATATTTGA 57.425 40.909 0.00 0.00 0.00 2.69
2358 2834 5.121380 ACTCACTTCCTGCCATATTTGAT 57.879 39.130 0.00 0.00 0.00 2.57
2359 2835 4.885907 ACTCACTTCCTGCCATATTTGATG 59.114 41.667 0.00 0.00 0.00 3.07
2360 2836 5.114764 TCACTTCCTGCCATATTTGATGA 57.885 39.130 0.00 0.00 0.00 2.92
2361 2837 5.508567 TCACTTCCTGCCATATTTGATGAA 58.491 37.500 0.00 0.00 0.00 2.57
2362 2838 6.131264 TCACTTCCTGCCATATTTGATGAAT 58.869 36.000 0.00 0.00 0.00 2.57
2363 2839 6.040054 TCACTTCCTGCCATATTTGATGAATG 59.960 38.462 0.00 0.00 0.00 2.67
2364 2840 6.040054 CACTTCCTGCCATATTTGATGAATGA 59.960 38.462 0.00 0.00 0.00 2.57
2365 2841 6.608405 ACTTCCTGCCATATTTGATGAATGAA 59.392 34.615 0.00 0.00 0.00 2.57
2366 2842 7.289317 ACTTCCTGCCATATTTGATGAATGAAT 59.711 33.333 0.00 0.00 0.00 2.57
2367 2843 6.988522 TCCTGCCATATTTGATGAATGAATG 58.011 36.000 0.00 0.00 0.00 2.67
2368 2844 6.778559 TCCTGCCATATTTGATGAATGAATGA 59.221 34.615 0.00 0.00 0.00 2.57
2369 2845 7.288158 TCCTGCCATATTTGATGAATGAATGAA 59.712 33.333 0.00 0.00 0.00 2.57
2370 2846 7.929245 CCTGCCATATTTGATGAATGAATGAAA 59.071 33.333 0.00 0.00 0.00 2.69
2371 2847 8.880878 TGCCATATTTGATGAATGAATGAAAG 57.119 30.769 0.00 0.00 0.00 2.62
2372 2848 7.929245 TGCCATATTTGATGAATGAATGAAAGG 59.071 33.333 0.00 0.00 0.00 3.11
2373 2849 7.929785 GCCATATTTGATGAATGAATGAAAGGT 59.070 33.333 0.00 0.00 0.00 3.50
2374 2850 9.256477 CCATATTTGATGAATGAATGAAAGGTG 57.744 33.333 0.00 0.00 0.00 4.00
2375 2851 9.256477 CATATTTGATGAATGAATGAAAGGTGG 57.744 33.333 0.00 0.00 0.00 4.61
2376 2852 6.669125 TTTGATGAATGAATGAAAGGTGGT 57.331 33.333 0.00 0.00 0.00 4.16
2377 2853 5.648178 TGATGAATGAATGAAAGGTGGTG 57.352 39.130 0.00 0.00 0.00 4.17
2378 2854 5.078949 TGATGAATGAATGAAAGGTGGTGT 58.921 37.500 0.00 0.00 0.00 4.16
2381 2857 5.139727 TGAATGAATGAAAGGTGGTGTCTT 58.860 37.500 0.00 0.00 0.00 3.01
2418 2894 6.041423 TGACATTATCTGCTGAGAACTTGA 57.959 37.500 2.55 0.00 0.00 3.02
2423 2899 7.925483 ACATTATCTGCTGAGAACTTGAGATAC 59.075 37.037 2.55 0.00 0.00 2.24
2432 2908 8.721478 GCTGAGAACTTGAGATACAATGTTAAA 58.279 33.333 0.00 0.00 37.88 1.52
2468 2944 8.524870 AATGTACTTTTGACATGAATCTTTGC 57.475 30.769 0.00 0.00 37.59 3.68
2469 2945 6.446318 TGTACTTTTGACATGAATCTTTGCC 58.554 36.000 0.00 0.00 0.00 4.52
2471 2947 4.344679 ACTTTTGACATGAATCTTTGCCCA 59.655 37.500 0.00 0.00 0.00 5.36
2472 2948 3.940209 TTGACATGAATCTTTGCCCAC 57.060 42.857 0.00 0.00 0.00 4.61
2478 2956 2.318908 TGAATCTTTGCCCACTTGCTT 58.681 42.857 0.00 0.00 0.00 3.91
2502 2980 0.538287 AGTTCAGAGGCCCTTGTTGC 60.538 55.000 0.00 0.00 0.00 4.17
2512 2990 3.825143 GCCCTTGTTGCCATAAATGAT 57.175 42.857 0.00 0.00 0.00 2.45
2513 2991 4.935352 GCCCTTGTTGCCATAAATGATA 57.065 40.909 0.00 0.00 0.00 2.15
2516 2994 5.786311 CCCTTGTTGCCATAAATGATATGG 58.214 41.667 9.62 9.62 45.50 2.74
2518 2996 6.493115 CCCTTGTTGCCATAAATGATATGGTA 59.507 38.462 14.23 8.41 44.76 3.25
2519 2997 7.370383 CCTTGTTGCCATAAATGATATGGTAC 58.630 38.462 14.23 12.73 44.76 3.34
2520 2998 6.892658 TGTTGCCATAAATGATATGGTACC 57.107 37.500 4.43 4.43 44.76 3.34
2521 2999 5.471797 TGTTGCCATAAATGATATGGTACCG 59.528 40.000 7.57 0.00 44.76 4.02
2522 3000 5.491323 TGCCATAAATGATATGGTACCGA 57.509 39.130 7.57 0.00 44.76 4.69
2523 3001 6.061022 TGCCATAAATGATATGGTACCGAT 57.939 37.500 7.57 2.81 44.76 4.18
2524 3002 7.189079 TGCCATAAATGATATGGTACCGATA 57.811 36.000 7.57 6.94 44.76 2.92
2525 3003 7.801104 TGCCATAAATGATATGGTACCGATAT 58.199 34.615 7.57 11.30 44.76 1.63
2526 3004 7.714813 TGCCATAAATGATATGGTACCGATATG 59.285 37.037 16.75 11.24 44.76 1.78
2527 3005 7.307989 GCCATAAATGATATGGTACCGATATGC 60.308 40.741 16.75 10.21 44.76 3.14
2528 3006 7.714813 CCATAAATGATATGGTACCGATATGCA 59.285 37.037 16.75 14.47 39.60 3.96
2529 3007 9.276590 CATAAATGATATGGTACCGATATGCAT 57.723 33.333 16.75 3.79 0.00 3.96
2530 3008 7.792374 AAATGATATGGTACCGATATGCATC 57.208 36.000 16.75 8.52 0.00 3.91
2531 3009 6.737720 ATGATATGGTACCGATATGCATCT 57.262 37.500 16.75 0.00 0.00 2.90
2532 3010 5.906073 TGATATGGTACCGATATGCATCTG 58.094 41.667 16.75 0.00 0.00 2.90
2533 3011 5.422012 TGATATGGTACCGATATGCATCTGT 59.578 40.000 16.75 0.00 33.68 3.41
2534 3012 4.623932 ATGGTACCGATATGCATCTGTT 57.376 40.909 0.19 0.00 31.80 3.16
2535 3013 4.415881 TGGTACCGATATGCATCTGTTT 57.584 40.909 0.19 0.00 31.80 2.83
2536 3014 4.776349 TGGTACCGATATGCATCTGTTTT 58.224 39.130 0.19 0.00 31.80 2.43
2537 3015 5.919755 TGGTACCGATATGCATCTGTTTTA 58.080 37.500 0.19 0.00 31.80 1.52
2538 3016 5.989168 TGGTACCGATATGCATCTGTTTTAG 59.011 40.000 0.19 0.00 31.80 1.85
2539 3017 5.107065 GGTACCGATATGCATCTGTTTTAGC 60.107 44.000 0.19 0.00 31.80 3.09
2540 3018 3.494626 ACCGATATGCATCTGTTTTAGCG 59.505 43.478 0.19 0.00 0.00 4.26
2541 3019 3.473367 CGATATGCATCTGTTTTAGCGC 58.527 45.455 0.19 0.00 0.00 5.92
2542 3020 3.059665 CGATATGCATCTGTTTTAGCGCA 60.060 43.478 11.47 0.00 38.40 6.09
2543 3021 4.377738 CGATATGCATCTGTTTTAGCGCAT 60.378 41.667 11.47 0.00 43.35 4.73
2544 3022 2.830772 TGCATCTGTTTTAGCGCATC 57.169 45.000 11.47 0.00 32.00 3.91
2545 3023 2.083002 TGCATCTGTTTTAGCGCATCA 58.917 42.857 11.47 0.00 32.00 3.07
2546 3024 2.487372 TGCATCTGTTTTAGCGCATCAA 59.513 40.909 11.47 0.00 32.00 2.57
2547 3025 3.057666 TGCATCTGTTTTAGCGCATCAAA 60.058 39.130 11.47 3.71 32.00 2.69
2548 3026 3.919804 GCATCTGTTTTAGCGCATCAAAA 59.080 39.130 11.47 10.28 0.00 2.44
2549 3027 4.030977 GCATCTGTTTTAGCGCATCAAAAG 59.969 41.667 11.47 3.06 0.00 2.27
2550 3028 5.393124 CATCTGTTTTAGCGCATCAAAAGA 58.607 37.500 11.47 8.98 0.00 2.52
2551 3029 5.627499 TCTGTTTTAGCGCATCAAAAGAT 57.373 34.783 11.47 0.00 0.00 2.40
2552 3030 6.012658 TCTGTTTTAGCGCATCAAAAGATT 57.987 33.333 11.47 0.00 0.00 2.40
2553 3031 7.139896 TCTGTTTTAGCGCATCAAAAGATTA 57.860 32.000 11.47 0.96 0.00 1.75
2554 3032 7.761409 TCTGTTTTAGCGCATCAAAAGATTAT 58.239 30.769 11.47 0.00 0.00 1.28
2555 3033 8.888716 TCTGTTTTAGCGCATCAAAAGATTATA 58.111 29.630 11.47 0.00 0.00 0.98
2556 3034 9.502145 CTGTTTTAGCGCATCAAAAGATTATAA 57.498 29.630 11.47 0.00 0.00 0.98
2557 3035 9.284594 TGTTTTAGCGCATCAAAAGATTATAAC 57.715 29.630 11.47 1.54 0.00 1.89
2558 3036 8.461398 GTTTTAGCGCATCAAAAGATTATAACG 58.539 33.333 11.47 0.00 0.00 3.18
2559 3037 5.095691 AGCGCATCAAAAGATTATAACGG 57.904 39.130 11.47 0.00 0.00 4.44
2560 3038 4.574828 AGCGCATCAAAAGATTATAACGGT 59.425 37.500 11.47 0.00 0.00 4.83
2561 3039 5.065988 AGCGCATCAAAAGATTATAACGGTT 59.934 36.000 11.47 0.00 0.00 4.44
2562 3040 5.395486 GCGCATCAAAAGATTATAACGGTTC 59.605 40.000 0.30 0.00 0.00 3.62
2563 3041 6.482835 CGCATCAAAAGATTATAACGGTTCA 58.517 36.000 0.00 0.00 0.00 3.18
2564 3042 6.628856 CGCATCAAAAGATTATAACGGTTCAG 59.371 38.462 0.00 0.00 0.00 3.02
2565 3043 7.472543 GCATCAAAAGATTATAACGGTTCAGT 58.527 34.615 0.00 0.00 0.00 3.41
2566 3044 7.968405 GCATCAAAAGATTATAACGGTTCAGTT 59.032 33.333 0.00 0.00 38.07 3.16
2567 3045 9.277565 CATCAAAAGATTATAACGGTTCAGTTG 57.722 33.333 0.00 0.00 35.70 3.16
2568 3046 8.610248 TCAAAAGATTATAACGGTTCAGTTGA 57.390 30.769 0.00 0.00 35.70 3.18
2569 3047 8.500773 TCAAAAGATTATAACGGTTCAGTTGAC 58.499 33.333 0.00 0.00 35.70 3.18
2570 3048 7.972832 AAAGATTATAACGGTTCAGTTGACA 57.027 32.000 0.00 0.00 35.70 3.58
2571 3049 8.561738 AAAGATTATAACGGTTCAGTTGACAT 57.438 30.769 0.00 0.00 35.70 3.06
2572 3050 9.661563 AAAGATTATAACGGTTCAGTTGACATA 57.338 29.630 0.00 0.00 35.70 2.29
2573 3051 8.873215 AGATTATAACGGTTCAGTTGACATAG 57.127 34.615 0.00 0.00 35.70 2.23
2574 3052 8.692710 AGATTATAACGGTTCAGTTGACATAGA 58.307 33.333 0.00 0.00 35.70 1.98
2575 3053 9.477484 GATTATAACGGTTCAGTTGACATAGAT 57.523 33.333 0.00 0.00 35.70 1.98
2576 3054 9.832445 ATTATAACGGTTCAGTTGACATAGATT 57.168 29.630 0.00 0.00 35.70 2.40
2581 3059 9.477484 AACGGTTCAGTTGACATAGATTATATC 57.523 33.333 0.00 0.00 32.39 1.63
2582 3060 8.088981 ACGGTTCAGTTGACATAGATTATATCC 58.911 37.037 0.00 0.00 0.00 2.59
2583 3061 8.307483 CGGTTCAGTTGACATAGATTATATCCT 58.693 37.037 0.00 0.00 0.00 3.24
2584 3062 9.429359 GGTTCAGTTGACATAGATTATATCCTG 57.571 37.037 0.00 0.00 0.00 3.86
2587 3065 9.593565 TCAGTTGACATAGATTATATCCTGACT 57.406 33.333 0.00 0.00 0.00 3.41
2588 3066 9.636879 CAGTTGACATAGATTATATCCTGACTG 57.363 37.037 0.00 0.00 0.00 3.51
2589 3067 9.593565 AGTTGACATAGATTATATCCTGACTGA 57.406 33.333 0.00 0.00 0.00 3.41
2592 3070 9.593565 TGACATAGATTATATCCTGACTGAAGT 57.406 33.333 0.00 0.00 0.00 3.01
2601 3079 5.948992 ATCCTGACTGAAGTTTAACTTGC 57.051 39.130 15.57 7.56 38.80 4.01
2602 3080 5.036117 TCCTGACTGAAGTTTAACTTGCT 57.964 39.130 15.57 0.00 38.80 3.91
2603 3081 4.816385 TCCTGACTGAAGTTTAACTTGCTG 59.184 41.667 15.57 12.13 38.80 4.41
2604 3082 4.816385 CCTGACTGAAGTTTAACTTGCTGA 59.184 41.667 15.57 0.00 38.80 4.26
2605 3083 5.277538 CCTGACTGAAGTTTAACTTGCTGAC 60.278 44.000 15.57 10.78 38.80 3.51
2606 3084 5.182487 TGACTGAAGTTTAACTTGCTGACA 58.818 37.500 15.57 12.73 38.80 3.58
2607 3085 5.064707 TGACTGAAGTTTAACTTGCTGACAC 59.935 40.000 15.57 0.00 38.80 3.67
2608 3086 4.941263 ACTGAAGTTTAACTTGCTGACACA 59.059 37.500 15.57 4.26 38.80 3.72
2609 3087 5.163754 ACTGAAGTTTAACTTGCTGACACAC 60.164 40.000 15.57 0.00 38.80 3.82
2610 3088 4.697828 TGAAGTTTAACTTGCTGACACACA 59.302 37.500 15.57 0.83 38.80 3.72
2611 3089 5.356751 TGAAGTTTAACTTGCTGACACACAT 59.643 36.000 15.57 0.00 38.80 3.21
2612 3090 5.835113 AGTTTAACTTGCTGACACACATT 57.165 34.783 0.00 0.00 0.00 2.71
2613 3091 6.935741 AGTTTAACTTGCTGACACACATTA 57.064 33.333 0.00 0.00 0.00 1.90
2614 3092 7.510549 AGTTTAACTTGCTGACACACATTAT 57.489 32.000 0.00 0.00 0.00 1.28
2615 3093 8.615878 AGTTTAACTTGCTGACACACATTATA 57.384 30.769 0.00 0.00 0.00 0.98
2616 3094 9.231297 AGTTTAACTTGCTGACACACATTATAT 57.769 29.630 0.00 0.00 0.00 0.86
2617 3095 9.840427 GTTTAACTTGCTGACACACATTATATT 57.160 29.630 0.00 0.00 0.00 1.28
2621 3099 8.962884 ACTTGCTGACACACATTATATTATGA 57.037 30.769 8.64 0.00 0.00 2.15
2622 3100 9.049523 ACTTGCTGACACACATTATATTATGAG 57.950 33.333 8.64 3.41 0.00 2.90
2623 3101 9.264719 CTTGCTGACACACATTATATTATGAGA 57.735 33.333 8.64 0.00 0.00 3.27
2624 3102 9.612066 TTGCTGACACACATTATATTATGAGAA 57.388 29.630 8.64 0.00 0.00 2.87
2625 3103 9.783081 TGCTGACACACATTATATTATGAGAAT 57.217 29.630 8.64 0.00 0.00 2.40
2655 3133 8.786826 ACCACTCGATAAAATGTATTTCTTCA 57.213 30.769 0.00 0.00 0.00 3.02
2656 3134 9.396022 ACCACTCGATAAAATGTATTTCTTCAT 57.604 29.630 0.00 0.00 0.00 2.57
2666 3144 9.783081 AAAATGTATTTCTTCATTTTCCTTGCT 57.217 25.926 9.18 0.00 45.17 3.91
2667 3145 8.767478 AATGTATTTCTTCATTTTCCTTGCTG 57.233 30.769 0.00 0.00 31.35 4.41
2668 3146 6.158598 TGTATTTCTTCATTTTCCTTGCTGC 58.841 36.000 0.00 0.00 0.00 5.25
2669 3147 4.942761 TTTCTTCATTTTCCTTGCTGCT 57.057 36.364 0.00 0.00 0.00 4.24
2670 3148 4.942761 TTCTTCATTTTCCTTGCTGCTT 57.057 36.364 0.00 0.00 0.00 3.91
2671 3149 6.403866 TTTCTTCATTTTCCTTGCTGCTTA 57.596 33.333 0.00 0.00 0.00 3.09
2672 3150 5.633830 TCTTCATTTTCCTTGCTGCTTAG 57.366 39.130 0.00 0.00 0.00 2.18
2673 3151 5.072741 TCTTCATTTTCCTTGCTGCTTAGT 58.927 37.500 0.00 0.00 0.00 2.24
2674 3152 6.237901 TCTTCATTTTCCTTGCTGCTTAGTA 58.762 36.000 0.00 0.00 0.00 1.82
2675 3153 6.372659 TCTTCATTTTCCTTGCTGCTTAGTAG 59.627 38.462 0.00 0.00 0.00 2.57
2676 3154 5.560724 TCATTTTCCTTGCTGCTTAGTAGT 58.439 37.500 0.00 0.00 0.00 2.73
2677 3155 6.003950 TCATTTTCCTTGCTGCTTAGTAGTT 58.996 36.000 0.00 0.00 0.00 2.24
2678 3156 7.165485 TCATTTTCCTTGCTGCTTAGTAGTTA 58.835 34.615 0.00 0.00 0.00 2.24
2679 3157 6.796705 TTTTCCTTGCTGCTTAGTAGTTAC 57.203 37.500 0.00 0.00 0.00 2.50
2680 3158 5.740290 TTCCTTGCTGCTTAGTAGTTACT 57.260 39.130 0.00 0.00 40.24 2.24
2681 3159 6.845758 TTCCTTGCTGCTTAGTAGTTACTA 57.154 37.500 0.00 0.00 37.73 1.82
2682 3160 6.452494 TCCTTGCTGCTTAGTAGTTACTAG 57.548 41.667 0.00 0.00 39.69 2.57
2683 3161 5.950549 TCCTTGCTGCTTAGTAGTTACTAGT 59.049 40.000 0.00 0.00 39.69 2.57
2684 3162 6.436532 TCCTTGCTGCTTAGTAGTTACTAGTT 59.563 38.462 0.00 0.00 39.69 2.24
2685 3163 6.531948 CCTTGCTGCTTAGTAGTTACTAGTTG 59.468 42.308 0.00 1.15 39.69 3.16
2686 3164 5.962433 TGCTGCTTAGTAGTTACTAGTTGG 58.038 41.667 0.00 0.85 39.69 3.77
2687 3165 5.479375 TGCTGCTTAGTAGTTACTAGTTGGT 59.521 40.000 0.00 0.00 39.69 3.67
2688 3166 6.660521 TGCTGCTTAGTAGTTACTAGTTGGTA 59.339 38.462 0.00 0.00 39.69 3.25
2689 3167 6.971756 GCTGCTTAGTAGTTACTAGTTGGTAC 59.028 42.308 0.00 0.42 39.69 3.34
2690 3168 7.148103 GCTGCTTAGTAGTTACTAGTTGGTACT 60.148 40.741 0.00 8.16 39.69 2.73
2691 3169 8.048534 TGCTTAGTAGTTACTAGTTGGTACTG 57.951 38.462 0.00 0.00 39.69 2.74
2692 3170 7.667219 TGCTTAGTAGTTACTAGTTGGTACTGT 59.333 37.037 0.00 0.00 39.69 3.55
2693 3171 9.167311 GCTTAGTAGTTACTAGTTGGTACTGTA 57.833 37.037 0.00 0.00 39.69 2.74
2696 3174 8.558973 AGTAGTTACTAGTTGGTACTGTAGTG 57.441 38.462 0.00 0.00 35.78 2.74
2697 3175 8.378565 AGTAGTTACTAGTTGGTACTGTAGTGA 58.621 37.037 0.00 0.00 35.78 3.41
2698 3176 7.684937 AGTTACTAGTTGGTACTGTAGTGAG 57.315 40.000 0.00 0.00 35.78 3.51
2699 3177 7.456725 AGTTACTAGTTGGTACTGTAGTGAGA 58.543 38.462 0.00 0.00 35.78 3.27
2700 3178 7.607223 AGTTACTAGTTGGTACTGTAGTGAGAG 59.393 40.741 0.00 0.00 35.78 3.20
2701 3179 5.878627 ACTAGTTGGTACTGTAGTGAGAGT 58.121 41.667 0.00 0.00 35.78 3.24
2702 3180 5.939296 ACTAGTTGGTACTGTAGTGAGAGTC 59.061 44.000 0.00 0.00 35.78 3.36
2703 3181 4.988029 AGTTGGTACTGTAGTGAGAGTCT 58.012 43.478 0.00 0.00 31.99 3.24
2704 3182 6.124316 AGTTGGTACTGTAGTGAGAGTCTA 57.876 41.667 0.00 0.00 31.99 2.59
2705 3183 5.939296 AGTTGGTACTGTAGTGAGAGTCTAC 59.061 44.000 0.00 0.00 38.45 2.59
2706 3184 4.841422 TGGTACTGTAGTGAGAGTCTACC 58.159 47.826 0.00 0.00 37.53 3.18
2707 3185 4.287845 TGGTACTGTAGTGAGAGTCTACCA 59.712 45.833 0.00 0.00 35.98 3.25
2708 3186 5.045066 TGGTACTGTAGTGAGAGTCTACCAT 60.045 44.000 0.00 0.00 34.32 3.55
2709 3187 6.157471 TGGTACTGTAGTGAGAGTCTACCATA 59.843 42.308 0.00 0.00 34.32 2.74
2710 3188 7.147355 TGGTACTGTAGTGAGAGTCTACCATAT 60.147 40.741 0.00 0.00 34.32 1.78
2711 3189 7.720515 GGTACTGTAGTGAGAGTCTACCATATT 59.279 40.741 0.00 0.00 37.53 1.28
2712 3190 9.775854 GTACTGTAGTGAGAGTCTACCATATTA 57.224 37.037 0.00 0.00 37.53 0.98
2713 3191 8.680039 ACTGTAGTGAGAGTCTACCATATTAC 57.320 38.462 0.00 0.00 37.53 1.89
2714 3192 8.496088 ACTGTAGTGAGAGTCTACCATATTACT 58.504 37.037 0.00 0.00 37.53 2.24
2715 3193 9.344772 CTGTAGTGAGAGTCTACCATATTACTT 57.655 37.037 0.00 0.00 37.53 2.24
2719 3197 9.344772 AGTGAGAGTCTACCATATTACTTACAG 57.655 37.037 0.00 0.00 0.00 2.74
2720 3198 9.122779 GTGAGAGTCTACCATATTACTTACAGT 57.877 37.037 0.00 0.00 0.00 3.55
2721 3199 9.696572 TGAGAGTCTACCATATTACTTACAGTT 57.303 33.333 0.00 0.00 0.00 3.16
2730 3208 9.362539 ACCATATTACTTACAGTTTAGTTCGTG 57.637 33.333 0.00 0.00 0.00 4.35
2731 3209 9.362539 CCATATTACTTACAGTTTAGTTCGTGT 57.637 33.333 0.00 0.00 0.00 4.49
2747 3225 6.608610 AGTTCGTGTATATTTTTCTGTTGGC 58.391 36.000 0.00 0.00 0.00 4.52
2748 3226 6.430000 AGTTCGTGTATATTTTTCTGTTGGCT 59.570 34.615 0.00 0.00 0.00 4.75
2749 3227 6.811253 TCGTGTATATTTTTCTGTTGGCTT 57.189 33.333 0.00 0.00 0.00 4.35
2750 3228 6.837992 TCGTGTATATTTTTCTGTTGGCTTC 58.162 36.000 0.00 0.00 0.00 3.86
2751 3229 6.428465 TCGTGTATATTTTTCTGTTGGCTTCA 59.572 34.615 0.00 0.00 0.00 3.02
2752 3230 6.742718 CGTGTATATTTTTCTGTTGGCTTCAG 59.257 38.462 3.77 3.77 0.00 3.02
2753 3231 7.360861 CGTGTATATTTTTCTGTTGGCTTCAGA 60.361 37.037 7.80 7.80 39.71 3.27
2754 3232 7.965107 GTGTATATTTTTCTGTTGGCTTCAGAG 59.035 37.037 10.75 0.00 41.87 3.35
2755 3233 7.665559 TGTATATTTTTCTGTTGGCTTCAGAGT 59.334 33.333 10.75 4.38 41.87 3.24
2756 3234 5.859205 ATTTTTCTGTTGGCTTCAGAGTT 57.141 34.783 10.75 0.00 41.87 3.01
2757 3235 4.900635 TTTTCTGTTGGCTTCAGAGTTC 57.099 40.909 10.75 0.00 41.87 3.01
2758 3236 3.845781 TTCTGTTGGCTTCAGAGTTCT 57.154 42.857 10.75 0.00 41.87 3.01
2759 3237 3.845781 TCTGTTGGCTTCAGAGTTCTT 57.154 42.857 7.80 0.00 37.07 2.52
2760 3238 3.470709 TCTGTTGGCTTCAGAGTTCTTG 58.529 45.455 7.80 0.00 37.07 3.02
2761 3239 1.949525 TGTTGGCTTCAGAGTTCTTGC 59.050 47.619 0.00 0.00 0.00 4.01
2762 3240 2.225467 GTTGGCTTCAGAGTTCTTGCT 58.775 47.619 0.00 0.00 0.00 3.91
2763 3241 2.620585 GTTGGCTTCAGAGTTCTTGCTT 59.379 45.455 0.00 0.00 0.00 3.91
2764 3242 2.498167 TGGCTTCAGAGTTCTTGCTTC 58.502 47.619 0.00 0.00 0.00 3.86
2765 3243 2.105477 TGGCTTCAGAGTTCTTGCTTCT 59.895 45.455 0.00 0.00 0.00 2.85
2766 3244 2.483491 GGCTTCAGAGTTCTTGCTTCTG 59.517 50.000 0.00 0.00 0.00 3.02
2767 3245 3.397482 GCTTCAGAGTTCTTGCTTCTGA 58.603 45.455 0.00 0.00 35.89 3.27
2768 3246 4.002316 GCTTCAGAGTTCTTGCTTCTGAT 58.998 43.478 4.46 0.00 37.31 2.90
2769 3247 4.093261 GCTTCAGAGTTCTTGCTTCTGATC 59.907 45.833 4.46 0.00 37.31 2.92
2772 3250 4.040829 TCAGAGTTCTTGCTTCTGATCCAA 59.959 41.667 0.00 0.00 33.17 3.53
2774 3252 4.759183 AGAGTTCTTGCTTCTGATCCAAAC 59.241 41.667 0.00 0.00 0.00 2.93
2784 3275 4.437682 TCTGATCCAAACACAAAGAGGT 57.562 40.909 0.00 0.00 0.00 3.85
2799 3290 5.181009 CAAAGAGGTGAGCTTATCATCACA 58.819 41.667 7.54 0.00 46.14 3.58
2800 3291 4.399004 AGAGGTGAGCTTATCATCACAC 57.601 45.455 7.54 0.00 46.14 3.82
2804 3297 2.283617 GTGAGCTTATCATCACACGCTG 59.716 50.000 0.00 0.00 44.21 5.18
2816 3309 0.657840 ACACGCTGTGCTCTGAAAAC 59.342 50.000 8.31 0.00 36.98 2.43
2819 3312 0.162507 CGCTGTGCTCTGAAAACGAG 59.837 55.000 0.00 0.00 0.00 4.18
2820 3313 1.221414 GCTGTGCTCTGAAAACGAGT 58.779 50.000 0.00 0.00 0.00 4.18
2822 3315 1.795286 CTGTGCTCTGAAAACGAGTCC 59.205 52.381 0.00 0.00 0.00 3.85
2823 3316 1.412710 TGTGCTCTGAAAACGAGTCCT 59.587 47.619 0.00 0.00 0.00 3.85
2824 3317 2.062519 GTGCTCTGAAAACGAGTCCTC 58.937 52.381 0.00 0.00 0.00 3.71
2825 3318 1.964223 TGCTCTGAAAACGAGTCCTCT 59.036 47.619 0.00 0.00 0.00 3.69
2826 3319 2.029828 TGCTCTGAAAACGAGTCCTCTC 60.030 50.000 0.00 0.00 37.35 3.20
2827 3320 2.672760 GCTCTGAAAACGAGTCCTCTCC 60.673 54.545 0.00 0.00 37.40 3.71
2828 3321 2.558795 CTCTGAAAACGAGTCCTCTCCA 59.441 50.000 0.00 0.00 37.40 3.86
2829 3322 3.165875 TCTGAAAACGAGTCCTCTCCAT 58.834 45.455 0.00 0.00 37.40 3.41
2830 3323 3.578716 TCTGAAAACGAGTCCTCTCCATT 59.421 43.478 0.00 0.00 37.40 3.16
2832 3325 4.065088 TGAAAACGAGTCCTCTCCATTTG 58.935 43.478 0.00 0.00 37.40 2.32
2845 3339 8.689972 GTCCTCTCCATTTGATGTTATTCATTT 58.310 33.333 0.00 0.00 36.83 2.32
2849 3343 6.887013 TCCATTTGATGTTATTCATTTGGGG 58.113 36.000 0.00 0.00 36.83 4.96
2851 3345 4.751767 TTGATGTTATTCATTTGGGGGC 57.248 40.909 0.00 0.00 36.83 5.80
2931 3515 4.991153 TGGCACACAAAAGATTACAACA 57.009 36.364 0.00 0.00 0.00 3.33
2937 3521 7.010923 GGCACACAAAAGATTACAACAATTCAA 59.989 33.333 0.00 0.00 0.00 2.69
2941 3525 8.967218 CACAAAAGATTACAACAATTCAATCGT 58.033 29.630 0.00 0.00 33.57 3.73
2942 3526 9.528018 ACAAAAGATTACAACAATTCAATCGTT 57.472 25.926 0.00 0.00 32.78 3.85
2954 3538 9.620660 AACAATTCAATCGTTAAAGATTACACC 57.379 29.630 14.98 0.00 38.66 4.16
2961 3546 6.397831 TCGTTAAAGATTACACCGTGATTG 57.602 37.500 5.28 0.00 0.00 2.67
2977 3562 5.173131 CCGTGATTGAAGTTTAACTTGTTGC 59.827 40.000 15.57 1.34 38.80 4.17
2984 3569 7.801716 TGAAGTTTAACTTGTTGCTACAGAT 57.198 32.000 15.57 0.00 38.80 2.90
2988 3573 8.095937 AGTTTAACTTGTTGCTACAGATTACC 57.904 34.615 0.37 0.00 35.28 2.85
2989 3574 7.937394 AGTTTAACTTGTTGCTACAGATTACCT 59.063 33.333 0.37 1.65 35.28 3.08
2990 3575 9.211485 GTTTAACTTGTTGCTACAGATTACCTA 57.789 33.333 0.37 0.00 35.28 3.08
3008 3593 7.817418 TTACCTAATGAGAATAATTGGCACC 57.183 36.000 0.00 0.00 0.00 5.01
3009 3594 5.140454 ACCTAATGAGAATAATTGGCACCC 58.860 41.667 0.00 0.00 0.00 4.61
3010 3595 5.139727 CCTAATGAGAATAATTGGCACCCA 58.860 41.667 0.00 0.00 0.00 4.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 57 7.873719 TCAAAATCTTGACAAAGTAGGTTCA 57.126 32.000 0.00 0.00 36.62 3.18
62 65 8.511465 ACGAAATCATCAAAATCTTGACAAAG 57.489 30.769 0.00 0.00 44.28 2.77
267 272 2.941453 GTCATTCTGACAGGCTACGA 57.059 50.000 1.81 0.00 46.22 3.43
298 303 5.784177 TCACTGAGAGGTTTCAATCTGTAC 58.216 41.667 0.00 0.00 0.00 2.90
787 796 0.321122 CTCTGCAACACACCTCCTCC 60.321 60.000 0.00 0.00 0.00 4.30
826 838 1.063174 GCGCACTTGCTTAGGATCAAG 59.937 52.381 0.30 0.00 43.79 3.02
928 956 2.665165 AGTTGCTCCATCACCAACAAA 58.335 42.857 5.66 0.00 40.85 2.83
943 983 6.538742 TGTGATAGGCTAACAGAAATAGTTGC 59.461 38.462 4.56 0.00 0.00 4.17
952 996 4.461431 TCGAACTTGTGATAGGCTAACAGA 59.539 41.667 4.56 0.75 0.00 3.41
982 1026 0.321653 ATGGAGTTTCCCGACAGTGC 60.322 55.000 0.00 0.00 35.03 4.40
989 1033 1.452108 GGAGGCATGGAGTTTCCCG 60.452 63.158 0.00 0.00 35.03 5.14
1067 1120 0.914417 GAGGTCAAGGGTCCCCATGA 60.914 60.000 3.51 6.19 40.91 3.07
1073 1126 2.663196 CGGTGAGGTCAAGGGTCC 59.337 66.667 0.00 0.00 0.00 4.46
1096 1149 1.614903 CCTCAGCTGAAACAATTGGCA 59.385 47.619 18.85 4.21 0.00 4.92
1138 1197 0.737715 GCTGGGAGCTGTACAAGACG 60.738 60.000 0.00 0.00 38.45 4.18
1155 1214 7.175797 AGTAAATAAGCCCTTTAAGTTCAGCT 58.824 34.615 0.00 0.00 0.00 4.24
1165 1224 4.941873 CGTCTCCAAGTAAATAAGCCCTTT 59.058 41.667 0.00 0.00 0.00 3.11
1202 1261 2.421107 GGGATGCTCTTGAGATCTGCAA 60.421 50.000 0.00 3.72 37.20 4.08
1264 1326 2.883888 GCAGCCCTTCTTCCATACCAAA 60.884 50.000 0.00 0.00 0.00 3.28
1335 1414 1.199615 TGCTCGGATTGGTCACCATA 58.800 50.000 0.00 0.00 31.53 2.74
1336 1415 0.548031 ATGCTCGGATTGGTCACCAT 59.452 50.000 0.00 0.00 31.53 3.55
1349 1446 1.538512 CCATAATGGCCTTCATGCTCG 59.461 52.381 3.32 0.00 35.99 5.03
1361 1473 1.597742 CTCGCCAAGACCCATAATGG 58.402 55.000 0.00 0.00 37.25 3.16
1383 1495 3.393426 ACCAGTTCCCTAAGATCGGTA 57.607 47.619 0.00 0.00 0.00 4.02
1422 1537 3.225104 AGCATCAAGTTTTGGCTTCTCA 58.775 40.909 0.00 0.00 0.00 3.27
1451 1566 2.664402 ACAAAGCTGTCCAATGGAGT 57.336 45.000 0.27 0.00 29.39 3.85
1462 1577 7.064609 TCGAAGATATTTGAGGTTACAAAGCTG 59.935 37.037 0.00 0.00 41.87 4.24
1562 1689 1.935933 ATTCAATACAGACCCGCGAC 58.064 50.000 8.23 0.00 0.00 5.19
1715 1852 3.369471 CCTTTCTTTAGGGAGATGCGACA 60.369 47.826 0.00 0.00 0.00 4.35
1788 1925 6.016777 GGTATGCCATAATGTCTTCCTTTGAG 60.017 42.308 0.00 0.00 34.09 3.02
1791 1928 5.829924 CAGGTATGCCATAATGTCTTCCTTT 59.170 40.000 1.54 0.00 37.19 3.11
1975 2121 0.179048 TGCACTGATAAGGCATCCCG 60.179 55.000 0.00 0.00 35.76 5.14
2041 2187 2.952310 AGCCTTCCACAAAACTCTTGAC 59.048 45.455 0.00 0.00 0.00 3.18
2044 2499 3.297134 TGAGCCTTCCACAAAACTCTT 57.703 42.857 0.00 0.00 0.00 2.85
2081 2536 5.555017 ACATAACTATGCCATCACCTGATC 58.445 41.667 0.00 0.00 37.19 2.92
2083 2538 5.372343 AACATAACTATGCCATCACCTGA 57.628 39.130 0.00 0.00 37.19 3.86
2133 2596 2.490903 GCAAGTTGATCATCCAACAGCT 59.509 45.455 7.16 0.00 46.48 4.24
2134 2597 2.229543 TGCAAGTTGATCATCCAACAGC 59.770 45.455 7.16 11.56 46.48 4.40
2147 2610 7.148983 CGTACTCCAAACATAAATTGCAAGTTG 60.149 37.037 21.57 9.58 0.00 3.16
2153 2616 7.861176 TTTTCGTACTCCAAACATAAATTGC 57.139 32.000 0.00 0.00 0.00 3.56
2157 2620 9.239002 CACAAATTTTCGTACTCCAAACATAAA 57.761 29.630 0.00 0.00 0.00 1.40
2166 2629 6.128742 ACGTACATCACAAATTTTCGTACTCC 60.129 38.462 0.00 0.00 0.00 3.85
2182 2645 8.896320 AGCAAATGGTAATTATACGTACATCA 57.104 30.769 0.00 0.00 32.51 3.07
2194 2657 7.054491 ACTGAGACAAAAGCAAATGGTAATT 57.946 32.000 0.00 0.00 0.00 1.40
2196 2659 7.575414 TTACTGAGACAAAAGCAAATGGTAA 57.425 32.000 0.00 0.00 0.00 2.85
2198 2661 6.096846 AGTTTACTGAGACAAAAGCAAATGGT 59.903 34.615 0.00 0.00 0.00 3.55
2203 2666 6.374333 ACAAGAGTTTACTGAGACAAAAGCAA 59.626 34.615 0.00 0.00 0.00 3.91
2205 2668 6.364945 ACAAGAGTTTACTGAGACAAAAGC 57.635 37.500 0.00 0.00 0.00 3.51
2209 2672 5.428253 AGCAACAAGAGTTTACTGAGACAA 58.572 37.500 0.00 0.00 35.28 3.18
2213 2676 6.216569 TGACTAGCAACAAGAGTTTACTGAG 58.783 40.000 0.00 0.00 35.28 3.35
2217 2680 5.932303 TCCATGACTAGCAACAAGAGTTTAC 59.068 40.000 0.00 0.00 35.28 2.01
2249 2724 7.490962 TTACATGTGTGTTTTCTCGATTCTT 57.509 32.000 9.11 0.00 39.77 2.52
2255 2730 5.685068 TGCATTTTACATGTGTGTTTTCTCG 59.315 36.000 9.11 0.00 39.77 4.04
2262 2737 4.319139 TTGCTGCATTTTACATGTGTGT 57.681 36.364 9.11 0.00 42.39 3.72
2263 2738 4.924462 TGATTGCTGCATTTTACATGTGTG 59.076 37.500 9.11 3.44 0.00 3.82
2266 2741 7.549839 ACTAATGATTGCTGCATTTTACATGT 58.450 30.769 1.84 2.69 37.22 3.21
2267 2742 7.919091 AGACTAATGATTGCTGCATTTTACATG 59.081 33.333 1.84 0.00 37.22 3.21
2268 2743 8.004087 AGACTAATGATTGCTGCATTTTACAT 57.996 30.769 1.84 2.76 37.22 2.29
2274 2750 5.593095 ACATGAGACTAATGATTGCTGCATT 59.407 36.000 6.82 0.00 39.20 3.56
2290 2766 3.057315 CCATGACCAAACCAACATGAGAC 60.057 47.826 0.00 0.00 41.45 3.36
2291 2767 3.156293 CCATGACCAAACCAACATGAGA 58.844 45.455 0.00 0.00 41.45 3.27
2294 2770 2.627221 TGACCATGACCAAACCAACATG 59.373 45.455 0.00 0.00 39.51 3.21
2305 2781 1.672881 GCAGCAACTATGACCATGACC 59.327 52.381 0.00 0.00 0.00 4.02
2309 2785 0.253044 ACGGCAGCAACTATGACCAT 59.747 50.000 0.00 0.00 0.00 3.55
2313 2789 2.009051 CATTGACGGCAGCAACTATGA 58.991 47.619 0.00 0.00 0.00 2.15
2333 2809 6.291377 TCAAATATGGCAGGAAGTGAGTATC 58.709 40.000 0.00 0.00 0.00 2.24
2334 2810 6.252599 TCAAATATGGCAGGAAGTGAGTAT 57.747 37.500 0.00 0.00 0.00 2.12
2335 2811 5.692115 TCAAATATGGCAGGAAGTGAGTA 57.308 39.130 0.00 0.00 0.00 2.59
2336 2812 4.574674 TCAAATATGGCAGGAAGTGAGT 57.425 40.909 0.00 0.00 0.00 3.41
2337 2813 5.128205 TCATCAAATATGGCAGGAAGTGAG 58.872 41.667 0.00 0.00 0.00 3.51
2338 2814 5.114764 TCATCAAATATGGCAGGAAGTGA 57.885 39.130 0.00 0.00 0.00 3.41
2339 2815 5.840243 TTCATCAAATATGGCAGGAAGTG 57.160 39.130 0.00 0.00 0.00 3.16
2340 2816 6.131264 TCATTCATCAAATATGGCAGGAAGT 58.869 36.000 0.00 0.00 0.00 3.01
2341 2817 6.644248 TCATTCATCAAATATGGCAGGAAG 57.356 37.500 0.00 0.00 0.00 3.46
2342 2818 7.288158 TCATTCATTCATCAAATATGGCAGGAA 59.712 33.333 0.00 0.00 0.00 3.36
2343 2819 6.778559 TCATTCATTCATCAAATATGGCAGGA 59.221 34.615 0.00 0.00 0.00 3.86
2344 2820 6.988522 TCATTCATTCATCAAATATGGCAGG 58.011 36.000 0.00 0.00 0.00 4.85
2345 2821 8.880878 TTTCATTCATTCATCAAATATGGCAG 57.119 30.769 0.00 0.00 0.00 4.85
2346 2822 7.929245 CCTTTCATTCATTCATCAAATATGGCA 59.071 33.333 0.00 0.00 0.00 4.92
2347 2823 7.929785 ACCTTTCATTCATTCATCAAATATGGC 59.070 33.333 0.00 0.00 0.00 4.40
2348 2824 9.256477 CACCTTTCATTCATTCATCAAATATGG 57.744 33.333 0.00 0.00 0.00 2.74
2349 2825 9.256477 CCACCTTTCATTCATTCATCAAATATG 57.744 33.333 0.00 0.00 0.00 1.78
2350 2826 8.984855 ACCACCTTTCATTCATTCATCAAATAT 58.015 29.630 0.00 0.00 0.00 1.28
2351 2827 8.252417 CACCACCTTTCATTCATTCATCAAATA 58.748 33.333 0.00 0.00 0.00 1.40
2352 2828 7.101054 CACCACCTTTCATTCATTCATCAAAT 58.899 34.615 0.00 0.00 0.00 2.32
2353 2829 6.041865 ACACCACCTTTCATTCATTCATCAAA 59.958 34.615 0.00 0.00 0.00 2.69
2354 2830 5.539574 ACACCACCTTTCATTCATTCATCAA 59.460 36.000 0.00 0.00 0.00 2.57
2355 2831 5.078949 ACACCACCTTTCATTCATTCATCA 58.921 37.500 0.00 0.00 0.00 3.07
2356 2832 5.416952 AGACACCACCTTTCATTCATTCATC 59.583 40.000 0.00 0.00 0.00 2.92
2357 2833 5.327732 AGACACCACCTTTCATTCATTCAT 58.672 37.500 0.00 0.00 0.00 2.57
2358 2834 4.728772 AGACACCACCTTTCATTCATTCA 58.271 39.130 0.00 0.00 0.00 2.57
2359 2835 5.712152 AAGACACCACCTTTCATTCATTC 57.288 39.130 0.00 0.00 0.00 2.67
2360 2836 8.906867 CATATAAGACACCACCTTTCATTCATT 58.093 33.333 0.00 0.00 0.00 2.57
2361 2837 8.274322 TCATATAAGACACCACCTTTCATTCAT 58.726 33.333 0.00 0.00 0.00 2.57
2362 2838 7.629157 TCATATAAGACACCACCTTTCATTCA 58.371 34.615 0.00 0.00 0.00 2.57
2363 2839 8.682936 ATCATATAAGACACCACCTTTCATTC 57.317 34.615 0.00 0.00 0.00 2.67
2364 2840 9.479549 AAATCATATAAGACACCACCTTTCATT 57.520 29.630 0.00 0.00 0.00 2.57
2365 2841 8.906867 CAAATCATATAAGACACCACCTTTCAT 58.093 33.333 0.00 0.00 0.00 2.57
2366 2842 7.888021 ACAAATCATATAAGACACCACCTTTCA 59.112 33.333 0.00 0.00 0.00 2.69
2367 2843 8.184192 CACAAATCATATAAGACACCACCTTTC 58.816 37.037 0.00 0.00 0.00 2.62
2368 2844 7.362920 GCACAAATCATATAAGACACCACCTTT 60.363 37.037 0.00 0.00 0.00 3.11
2369 2845 6.095440 GCACAAATCATATAAGACACCACCTT 59.905 38.462 0.00 0.00 0.00 3.50
2370 2846 5.590259 GCACAAATCATATAAGACACCACCT 59.410 40.000 0.00 0.00 0.00 4.00
2371 2847 5.590259 AGCACAAATCATATAAGACACCACC 59.410 40.000 0.00 0.00 0.00 4.61
2372 2848 6.316140 TCAGCACAAATCATATAAGACACCAC 59.684 38.462 0.00 0.00 0.00 4.16
2373 2849 6.316140 GTCAGCACAAATCATATAAGACACCA 59.684 38.462 0.00 0.00 0.00 4.17
2374 2850 6.316140 TGTCAGCACAAATCATATAAGACACC 59.684 38.462 0.00 0.00 0.00 4.16
2375 2851 7.307493 TGTCAGCACAAATCATATAAGACAC 57.693 36.000 0.00 0.00 0.00 3.67
2376 2852 8.510243 AATGTCAGCACAAATCATATAAGACA 57.490 30.769 0.00 0.00 35.64 3.41
2381 2857 8.724229 GCAGATAATGTCAGCACAAATCATATA 58.276 33.333 0.00 0.00 39.03 0.86
2442 2918 9.624697 GCAAAGATTCATGTCAAAAGTACATTA 57.375 29.630 0.00 0.00 35.39 1.90
2443 2919 7.599998 GGCAAAGATTCATGTCAAAAGTACATT 59.400 33.333 0.00 0.00 35.39 2.71
2444 2920 7.092716 GGCAAAGATTCATGTCAAAAGTACAT 58.907 34.615 0.00 0.00 38.08 2.29
2446 2922 5.863935 GGGCAAAGATTCATGTCAAAAGTAC 59.136 40.000 0.00 0.00 0.00 2.73
2447 2923 5.538053 TGGGCAAAGATTCATGTCAAAAGTA 59.462 36.000 0.00 0.00 0.00 2.24
2448 2924 4.344679 TGGGCAAAGATTCATGTCAAAAGT 59.655 37.500 0.00 0.00 0.00 2.66
2449 2925 4.687483 GTGGGCAAAGATTCATGTCAAAAG 59.313 41.667 0.00 0.00 0.00 2.27
2451 2927 3.896888 AGTGGGCAAAGATTCATGTCAAA 59.103 39.130 0.00 0.00 0.00 2.69
2455 2931 2.028748 GCAAGTGGGCAAAGATTCATGT 60.029 45.455 0.00 0.00 0.00 3.21
2460 2936 2.036346 GTCAAGCAAGTGGGCAAAGATT 59.964 45.455 0.00 0.00 35.83 2.40
2463 2939 0.746063 TGTCAAGCAAGTGGGCAAAG 59.254 50.000 0.00 0.00 35.83 2.77
2464 2940 1.189752 TTGTCAAGCAAGTGGGCAAA 58.810 45.000 0.00 0.00 35.83 3.68
2478 2956 1.140312 AAGGGCCTCTGAACTTGTCA 58.860 50.000 6.46 0.00 34.17 3.58
2510 2988 5.907207 ACAGATGCATATCGGTACCATATC 58.093 41.667 13.54 5.05 39.47 1.63
2512 2990 5.738619 AACAGATGCATATCGGTACCATA 57.261 39.130 13.54 9.34 40.19 2.74
2513 2991 4.623932 AACAGATGCATATCGGTACCAT 57.376 40.909 13.54 7.35 40.19 3.55
2516 2994 5.388475 CGCTAAAACAGATGCATATCGGTAC 60.388 44.000 0.00 0.00 40.19 3.34
2518 2996 3.494626 CGCTAAAACAGATGCATATCGGT 59.505 43.478 0.00 0.00 42.38 4.69
2519 2997 3.665323 GCGCTAAAACAGATGCATATCGG 60.665 47.826 0.00 0.00 38.38 4.18
2520 2998 3.059665 TGCGCTAAAACAGATGCATATCG 60.060 43.478 9.73 0.00 38.38 2.92
2521 2999 4.472691 TGCGCTAAAACAGATGCATATC 57.527 40.909 9.73 0.00 33.70 1.63
2522 3000 4.516321 TGATGCGCTAAAACAGATGCATAT 59.484 37.500 9.73 0.00 43.71 1.78
2523 3001 3.876320 TGATGCGCTAAAACAGATGCATA 59.124 39.130 9.73 0.00 43.71 3.14
2524 3002 2.684374 TGATGCGCTAAAACAGATGCAT 59.316 40.909 9.73 0.00 45.28 3.96
2525 3003 2.083002 TGATGCGCTAAAACAGATGCA 58.917 42.857 9.73 0.00 40.21 3.96
2526 3004 2.830772 TGATGCGCTAAAACAGATGC 57.169 45.000 9.73 0.00 0.00 3.91
2527 3005 5.393124 TCTTTTGATGCGCTAAAACAGATG 58.607 37.500 9.73 2.60 0.00 2.90
2528 3006 5.627499 TCTTTTGATGCGCTAAAACAGAT 57.373 34.783 9.73 0.00 0.00 2.90
2529 3007 5.627499 ATCTTTTGATGCGCTAAAACAGA 57.373 34.783 9.73 8.27 37.85 3.41
2530 3008 7.975866 ATAATCTTTTGATGCGCTAAAACAG 57.024 32.000 9.73 2.74 39.48 3.16
2531 3009 9.284594 GTTATAATCTTTTGATGCGCTAAAACA 57.715 29.630 9.73 2.45 39.48 2.83
2532 3010 8.461398 CGTTATAATCTTTTGATGCGCTAAAAC 58.539 33.333 9.73 0.16 39.48 2.43
2533 3011 7.642194 CCGTTATAATCTTTTGATGCGCTAAAA 59.358 33.333 9.73 12.56 39.48 1.52
2534 3012 7.129622 CCGTTATAATCTTTTGATGCGCTAAA 58.870 34.615 9.73 4.91 39.48 1.85
2535 3013 6.259167 ACCGTTATAATCTTTTGATGCGCTAA 59.741 34.615 9.73 0.00 39.48 3.09
2536 3014 5.756347 ACCGTTATAATCTTTTGATGCGCTA 59.244 36.000 9.73 0.00 39.48 4.26
2537 3015 4.574828 ACCGTTATAATCTTTTGATGCGCT 59.425 37.500 9.73 0.00 39.48 5.92
2538 3016 4.844267 ACCGTTATAATCTTTTGATGCGC 58.156 39.130 0.00 0.00 39.48 6.09
2539 3017 6.482835 TGAACCGTTATAATCTTTTGATGCG 58.517 36.000 0.00 0.00 39.48 4.73
2540 3018 7.472543 ACTGAACCGTTATAATCTTTTGATGC 58.527 34.615 0.00 0.00 39.48 3.91
2541 3019 9.277565 CAACTGAACCGTTATAATCTTTTGATG 57.722 33.333 0.00 0.00 39.48 3.07
2542 3020 9.226606 TCAACTGAACCGTTATAATCTTTTGAT 57.773 29.630 0.00 0.00 41.73 2.57
2543 3021 8.500773 GTCAACTGAACCGTTATAATCTTTTGA 58.499 33.333 0.00 0.00 0.00 2.69
2544 3022 8.286800 TGTCAACTGAACCGTTATAATCTTTTG 58.713 33.333 0.00 0.00 0.00 2.44
2545 3023 8.385898 TGTCAACTGAACCGTTATAATCTTTT 57.614 30.769 0.00 0.00 0.00 2.27
2546 3024 7.972832 TGTCAACTGAACCGTTATAATCTTT 57.027 32.000 0.00 0.00 0.00 2.52
2547 3025 9.314321 CTATGTCAACTGAACCGTTATAATCTT 57.686 33.333 0.00 0.00 0.00 2.40
2548 3026 8.692710 TCTATGTCAACTGAACCGTTATAATCT 58.307 33.333 0.00 0.00 0.00 2.40
2549 3027 8.867112 TCTATGTCAACTGAACCGTTATAATC 57.133 34.615 0.00 0.00 0.00 1.75
2550 3028 9.832445 AATCTATGTCAACTGAACCGTTATAAT 57.168 29.630 0.00 0.00 0.00 1.28
2555 3033 9.477484 GATATAATCTATGTCAACTGAACCGTT 57.523 33.333 0.00 0.00 0.00 4.44
2556 3034 8.088981 GGATATAATCTATGTCAACTGAACCGT 58.911 37.037 0.00 0.00 0.00 4.83
2557 3035 8.307483 AGGATATAATCTATGTCAACTGAACCG 58.693 37.037 0.00 0.00 0.00 4.44
2558 3036 9.429359 CAGGATATAATCTATGTCAACTGAACC 57.571 37.037 0.00 0.00 0.00 3.62
2561 3039 9.593565 AGTCAGGATATAATCTATGTCAACTGA 57.406 33.333 0.00 0.00 29.29 3.41
2562 3040 9.636879 CAGTCAGGATATAATCTATGTCAACTG 57.363 37.037 0.00 0.00 32.48 3.16
2563 3041 9.593565 TCAGTCAGGATATAATCTATGTCAACT 57.406 33.333 0.00 0.00 0.00 3.16
2566 3044 9.593565 ACTTCAGTCAGGATATAATCTATGTCA 57.406 33.333 0.00 0.00 0.00 3.58
2575 3053 9.162764 GCAAGTTAAACTTCAGTCAGGATATAA 57.837 33.333 0.00 0.00 36.03 0.98
2576 3054 8.540388 AGCAAGTTAAACTTCAGTCAGGATATA 58.460 33.333 0.00 0.00 36.03 0.86
2577 3055 7.335422 CAGCAAGTTAAACTTCAGTCAGGATAT 59.665 37.037 0.00 0.00 36.03 1.63
2578 3056 6.650807 CAGCAAGTTAAACTTCAGTCAGGATA 59.349 38.462 0.00 0.00 36.03 2.59
2579 3057 5.471456 CAGCAAGTTAAACTTCAGTCAGGAT 59.529 40.000 0.00 0.00 36.03 3.24
2580 3058 4.816385 CAGCAAGTTAAACTTCAGTCAGGA 59.184 41.667 0.00 0.00 36.03 3.86
2581 3059 4.816385 TCAGCAAGTTAAACTTCAGTCAGG 59.184 41.667 0.00 0.00 36.03 3.86
2582 3060 5.294306 TGTCAGCAAGTTAAACTTCAGTCAG 59.706 40.000 0.00 0.00 36.03 3.51
2583 3061 5.064707 GTGTCAGCAAGTTAAACTTCAGTCA 59.935 40.000 0.00 0.00 36.03 3.41
2584 3062 5.064707 TGTGTCAGCAAGTTAAACTTCAGTC 59.935 40.000 0.00 0.00 36.03 3.51
2585 3063 4.941263 TGTGTCAGCAAGTTAAACTTCAGT 59.059 37.500 0.00 0.00 36.03 3.41
2586 3064 5.163764 TGTGTGTCAGCAAGTTAAACTTCAG 60.164 40.000 0.00 0.00 36.03 3.02
2587 3065 4.697828 TGTGTGTCAGCAAGTTAAACTTCA 59.302 37.500 0.00 0.00 36.03 3.02
2588 3066 5.229921 TGTGTGTCAGCAAGTTAAACTTC 57.770 39.130 0.00 0.00 36.03 3.01
2589 3067 5.835113 ATGTGTGTCAGCAAGTTAAACTT 57.165 34.783 0.00 0.00 39.39 2.66
2590 3068 5.835113 AATGTGTGTCAGCAAGTTAAACT 57.165 34.783 0.00 0.00 0.00 2.66
2591 3069 9.840427 AATATAATGTGTGTCAGCAAGTTAAAC 57.160 29.630 0.00 0.00 0.00 2.01
2595 3073 9.394767 TCATAATATAATGTGTGTCAGCAAGTT 57.605 29.630 0.00 0.00 0.00 2.66
2596 3074 8.962884 TCATAATATAATGTGTGTCAGCAAGT 57.037 30.769 0.00 0.00 0.00 3.16
2597 3075 9.264719 TCTCATAATATAATGTGTGTCAGCAAG 57.735 33.333 0.00 0.00 0.00 4.01
2598 3076 9.612066 TTCTCATAATATAATGTGTGTCAGCAA 57.388 29.630 0.00 0.00 0.00 3.91
2599 3077 9.783081 ATTCTCATAATATAATGTGTGTCAGCA 57.217 29.630 0.00 0.00 0.00 4.41
2629 3107 9.878667 TGAAGAAATACATTTTATCGAGTGGTA 57.121 29.630 0.00 0.00 0.00 3.25
2630 3108 8.786826 TGAAGAAATACATTTTATCGAGTGGT 57.213 30.769 0.00 0.00 0.00 4.16
2641 3119 9.211485 CAGCAAGGAAAATGAAGAAATACATTT 57.789 29.630 0.00 0.00 44.88 2.32
2642 3120 7.332678 GCAGCAAGGAAAATGAAGAAATACATT 59.667 33.333 0.00 0.00 38.18 2.71
2643 3121 6.815142 GCAGCAAGGAAAATGAAGAAATACAT 59.185 34.615 0.00 0.00 0.00 2.29
2644 3122 6.015180 AGCAGCAAGGAAAATGAAGAAATACA 60.015 34.615 0.00 0.00 0.00 2.29
2645 3123 6.393171 AGCAGCAAGGAAAATGAAGAAATAC 58.607 36.000 0.00 0.00 0.00 1.89
2646 3124 6.594788 AGCAGCAAGGAAAATGAAGAAATA 57.405 33.333 0.00 0.00 0.00 1.40
2647 3125 5.479124 AGCAGCAAGGAAAATGAAGAAAT 57.521 34.783 0.00 0.00 0.00 2.17
2648 3126 4.942761 AGCAGCAAGGAAAATGAAGAAA 57.057 36.364 0.00 0.00 0.00 2.52
2649 3127 4.942761 AAGCAGCAAGGAAAATGAAGAA 57.057 36.364 0.00 0.00 0.00 2.52
2650 3128 5.072741 ACTAAGCAGCAAGGAAAATGAAGA 58.927 37.500 0.00 0.00 0.00 2.87
2651 3129 5.382618 ACTAAGCAGCAAGGAAAATGAAG 57.617 39.130 0.00 0.00 0.00 3.02
2652 3130 6.003950 ACTACTAAGCAGCAAGGAAAATGAA 58.996 36.000 0.00 0.00 0.00 2.57
2653 3131 5.560724 ACTACTAAGCAGCAAGGAAAATGA 58.439 37.500 0.00 0.00 0.00 2.57
2654 3132 5.886960 ACTACTAAGCAGCAAGGAAAATG 57.113 39.130 0.00 0.00 0.00 2.32
2655 3133 7.168905 AGTAACTACTAAGCAGCAAGGAAAAT 58.831 34.615 0.00 0.00 34.13 1.82
2656 3134 6.531021 AGTAACTACTAAGCAGCAAGGAAAA 58.469 36.000 0.00 0.00 34.13 2.29
2657 3135 6.110411 AGTAACTACTAAGCAGCAAGGAAA 57.890 37.500 0.00 0.00 34.13 3.13
2658 3136 5.740290 AGTAACTACTAAGCAGCAAGGAA 57.260 39.130 0.00 0.00 34.13 3.36
2659 3137 5.950549 ACTAGTAACTACTAAGCAGCAAGGA 59.049 40.000 0.00 0.00 38.24 3.36
2660 3138 6.210287 ACTAGTAACTACTAAGCAGCAAGG 57.790 41.667 0.00 0.00 38.24 3.61
2661 3139 6.531948 CCAACTAGTAACTACTAAGCAGCAAG 59.468 42.308 0.00 0.00 38.24 4.01
2662 3140 6.014840 ACCAACTAGTAACTACTAAGCAGCAA 60.015 38.462 0.00 0.00 38.24 3.91
2663 3141 5.479375 ACCAACTAGTAACTACTAAGCAGCA 59.521 40.000 0.00 0.00 38.24 4.41
2664 3142 5.963594 ACCAACTAGTAACTACTAAGCAGC 58.036 41.667 0.00 0.00 38.24 5.25
2665 3143 8.182881 CAGTACCAACTAGTAACTACTAAGCAG 58.817 40.741 0.00 0.00 38.24 4.24
2666 3144 7.667219 ACAGTACCAACTAGTAACTACTAAGCA 59.333 37.037 0.00 0.00 38.24 3.91
2667 3145 8.049655 ACAGTACCAACTAGTAACTACTAAGC 57.950 38.462 0.00 0.00 38.24 3.09
2670 3148 9.658799 CACTACAGTACCAACTAGTAACTACTA 57.341 37.037 0.00 0.00 37.73 1.82
2671 3149 8.378565 TCACTACAGTACCAACTAGTAACTACT 58.621 37.037 0.00 0.00 40.24 2.57
2672 3150 8.553459 TCACTACAGTACCAACTAGTAACTAC 57.447 38.462 0.00 0.00 33.48 2.73
2673 3151 8.597167 TCTCACTACAGTACCAACTAGTAACTA 58.403 37.037 0.00 0.00 33.48 2.24
2674 3152 7.456725 TCTCACTACAGTACCAACTAGTAACT 58.543 38.462 0.00 0.00 33.48 2.24
2675 3153 7.390162 ACTCTCACTACAGTACCAACTAGTAAC 59.610 40.741 0.00 0.00 33.48 2.50
2676 3154 7.456725 ACTCTCACTACAGTACCAACTAGTAA 58.543 38.462 0.00 0.00 33.48 2.24
2677 3155 7.013823 ACTCTCACTACAGTACCAACTAGTA 57.986 40.000 0.00 0.00 33.48 1.82
2678 3156 5.878627 ACTCTCACTACAGTACCAACTAGT 58.121 41.667 0.00 0.00 33.48 2.57
2679 3157 6.174760 AGACTCTCACTACAGTACCAACTAG 58.825 44.000 0.00 0.00 33.48 2.57
2680 3158 6.124316 AGACTCTCACTACAGTACCAACTA 57.876 41.667 0.00 0.00 33.48 2.24
2681 3159 4.988029 AGACTCTCACTACAGTACCAACT 58.012 43.478 0.00 0.00 35.91 3.16
2682 3160 5.123661 GGTAGACTCTCACTACAGTACCAAC 59.876 48.000 0.00 0.00 41.08 3.77
2683 3161 5.221986 TGGTAGACTCTCACTACAGTACCAA 60.222 44.000 0.00 0.00 41.08 3.67
2684 3162 4.287845 TGGTAGACTCTCACTACAGTACCA 59.712 45.833 0.00 0.00 41.08 3.25
2685 3163 4.841422 TGGTAGACTCTCACTACAGTACC 58.159 47.826 0.00 0.00 41.08 3.34
2686 3164 8.680039 AATATGGTAGACTCTCACTACAGTAC 57.320 38.462 0.00 0.00 41.08 2.73
2687 3165 9.775854 GTAATATGGTAGACTCTCACTACAGTA 57.224 37.037 0.00 0.00 41.08 2.74
2688 3166 8.496088 AGTAATATGGTAGACTCTCACTACAGT 58.504 37.037 0.00 0.00 41.08 3.55
2689 3167 8.911918 AGTAATATGGTAGACTCTCACTACAG 57.088 38.462 0.00 0.00 41.08 2.74
2693 3171 9.344772 CTGTAAGTAATATGGTAGACTCTCACT 57.655 37.037 0.00 0.00 0.00 3.41
2721 3199 8.231837 GCCAACAGAAAAATATACACGAACTAA 58.768 33.333 0.00 0.00 0.00 2.24
2722 3200 7.604927 AGCCAACAGAAAAATATACACGAACTA 59.395 33.333 0.00 0.00 0.00 2.24
2723 3201 6.430000 AGCCAACAGAAAAATATACACGAACT 59.570 34.615 0.00 0.00 0.00 3.01
2724 3202 6.608610 AGCCAACAGAAAAATATACACGAAC 58.391 36.000 0.00 0.00 0.00 3.95
2725 3203 6.811253 AGCCAACAGAAAAATATACACGAA 57.189 33.333 0.00 0.00 0.00 3.85
2726 3204 6.428465 TGAAGCCAACAGAAAAATATACACGA 59.572 34.615 0.00 0.00 0.00 4.35
2727 3205 6.607689 TGAAGCCAACAGAAAAATATACACG 58.392 36.000 0.00 0.00 0.00 4.49
2728 3206 7.816640 TCTGAAGCCAACAGAAAAATATACAC 58.183 34.615 0.00 0.00 40.70 2.90
2729 3207 7.665559 ACTCTGAAGCCAACAGAAAAATATACA 59.334 33.333 0.00 0.00 42.58 2.29
2730 3208 8.045176 ACTCTGAAGCCAACAGAAAAATATAC 57.955 34.615 0.00 0.00 42.58 1.47
2731 3209 8.635765 AACTCTGAAGCCAACAGAAAAATATA 57.364 30.769 0.00 0.00 42.58 0.86
2732 3210 7.449704 AGAACTCTGAAGCCAACAGAAAAATAT 59.550 33.333 0.00 0.00 42.58 1.28
2733 3211 6.772716 AGAACTCTGAAGCCAACAGAAAAATA 59.227 34.615 0.00 0.00 42.58 1.40
2734 3212 5.595952 AGAACTCTGAAGCCAACAGAAAAAT 59.404 36.000 0.00 0.00 42.58 1.82
2735 3213 4.949856 AGAACTCTGAAGCCAACAGAAAAA 59.050 37.500 0.00 0.00 42.58 1.94
2736 3214 4.526970 AGAACTCTGAAGCCAACAGAAAA 58.473 39.130 0.00 0.00 42.58 2.29
2737 3215 4.156455 AGAACTCTGAAGCCAACAGAAA 57.844 40.909 0.00 0.00 42.58 2.52
2738 3216 3.845781 AGAACTCTGAAGCCAACAGAA 57.154 42.857 0.00 0.00 42.58 3.02
2739 3217 3.470709 CAAGAACTCTGAAGCCAACAGA 58.529 45.455 0.00 0.00 41.26 3.41
2740 3218 2.031333 GCAAGAACTCTGAAGCCAACAG 60.031 50.000 0.00 0.00 36.80 3.16
2741 3219 1.949525 GCAAGAACTCTGAAGCCAACA 59.050 47.619 0.00 0.00 0.00 3.33
2742 3220 2.225467 AGCAAGAACTCTGAAGCCAAC 58.775 47.619 0.00 0.00 0.00 3.77
2743 3221 2.645838 AGCAAGAACTCTGAAGCCAA 57.354 45.000 0.00 0.00 0.00 4.52
2744 3222 2.105477 AGAAGCAAGAACTCTGAAGCCA 59.895 45.455 0.00 0.00 0.00 4.75
2745 3223 2.483491 CAGAAGCAAGAACTCTGAAGCC 59.517 50.000 0.00 0.00 0.00 4.35
2746 3224 3.397482 TCAGAAGCAAGAACTCTGAAGC 58.603 45.455 0.00 0.00 34.91 3.86
2747 3225 4.630940 GGATCAGAAGCAAGAACTCTGAAG 59.369 45.833 5.20 0.00 40.26 3.02
2748 3226 4.040829 TGGATCAGAAGCAAGAACTCTGAA 59.959 41.667 5.20 0.00 40.26 3.02
2749 3227 3.580022 TGGATCAGAAGCAAGAACTCTGA 59.420 43.478 3.67 3.67 40.98 3.27
2750 3228 3.935315 TGGATCAGAAGCAAGAACTCTG 58.065 45.455 0.00 0.00 0.00 3.35
2751 3229 4.630644 TTGGATCAGAAGCAAGAACTCT 57.369 40.909 0.00 0.00 0.00 3.24
2752 3230 4.516698 TGTTTGGATCAGAAGCAAGAACTC 59.483 41.667 0.00 0.00 0.00 3.01
2753 3231 4.276926 GTGTTTGGATCAGAAGCAAGAACT 59.723 41.667 0.00 0.00 0.00 3.01
2754 3232 4.036734 TGTGTTTGGATCAGAAGCAAGAAC 59.963 41.667 0.00 0.00 0.00 3.01
2755 3233 4.206375 TGTGTTTGGATCAGAAGCAAGAA 58.794 39.130 0.00 0.00 0.00 2.52
2756 3234 3.819368 TGTGTTTGGATCAGAAGCAAGA 58.181 40.909 0.00 0.00 0.00 3.02
2757 3235 4.572985 TTGTGTTTGGATCAGAAGCAAG 57.427 40.909 0.00 0.00 0.00 4.01
2758 3236 4.644234 TCTTTGTGTTTGGATCAGAAGCAA 59.356 37.500 0.00 0.00 0.00 3.91
2759 3237 4.206375 TCTTTGTGTTTGGATCAGAAGCA 58.794 39.130 0.00 0.00 0.00 3.91
2760 3238 4.320788 CCTCTTTGTGTTTGGATCAGAAGC 60.321 45.833 0.00 0.00 0.00 3.86
2761 3239 4.823989 ACCTCTTTGTGTTTGGATCAGAAG 59.176 41.667 0.00 0.00 0.00 2.85
2762 3240 4.580167 CACCTCTTTGTGTTTGGATCAGAA 59.420 41.667 0.00 0.00 0.00 3.02
2763 3241 4.136796 CACCTCTTTGTGTTTGGATCAGA 58.863 43.478 0.00 0.00 0.00 3.27
2764 3242 4.136796 TCACCTCTTTGTGTTTGGATCAG 58.863 43.478 0.00 0.00 37.51 2.90
2765 3243 4.136796 CTCACCTCTTTGTGTTTGGATCA 58.863 43.478 0.00 0.00 37.51 2.92
2766 3244 3.057946 GCTCACCTCTTTGTGTTTGGATC 60.058 47.826 0.00 0.00 37.51 3.36
2767 3245 2.887152 GCTCACCTCTTTGTGTTTGGAT 59.113 45.455 0.00 0.00 37.51 3.41
2768 3246 2.092429 AGCTCACCTCTTTGTGTTTGGA 60.092 45.455 0.00 0.00 37.51 3.53
2769 3247 2.301346 AGCTCACCTCTTTGTGTTTGG 58.699 47.619 0.00 0.00 37.51 3.28
2772 3250 4.973168 TGATAAGCTCACCTCTTTGTGTT 58.027 39.130 0.00 0.00 37.51 3.32
2774 3252 5.064452 GTGATGATAAGCTCACCTCTTTGTG 59.936 44.000 0.00 0.00 36.48 3.33
2784 3275 2.094026 ACAGCGTGTGATGATAAGCTCA 60.094 45.455 0.00 0.00 38.53 4.26
2799 3290 0.529773 TCGTTTTCAGAGCACAGCGT 60.530 50.000 0.00 0.00 0.00 5.07
2800 3291 0.162507 CTCGTTTTCAGAGCACAGCG 59.837 55.000 0.00 0.00 0.00 5.18
2804 3297 2.062519 GAGGACTCGTTTTCAGAGCAC 58.937 52.381 0.00 0.00 39.23 4.40
2816 3309 3.533606 ACATCAAATGGAGAGGACTCG 57.466 47.619 0.00 0.00 43.44 4.18
2819 3312 7.814264 ATGAATAACATCAAATGGAGAGGAC 57.186 36.000 0.00 0.00 33.46 3.85
2820 3313 8.689061 CAAATGAATAACATCAAATGGAGAGGA 58.311 33.333 0.00 0.00 38.38 3.71
2822 3315 7.924412 CCCAAATGAATAACATCAAATGGAGAG 59.076 37.037 11.20 0.00 39.57 3.20
2823 3316 7.147689 CCCCAAATGAATAACATCAAATGGAGA 60.148 37.037 11.20 0.00 39.57 3.71
2824 3317 6.987992 CCCCAAATGAATAACATCAAATGGAG 59.012 38.462 11.20 0.00 39.57 3.86
2825 3318 6.126825 CCCCCAAATGAATAACATCAAATGGA 60.127 38.462 11.20 0.00 39.57 3.41
2826 3319 6.056884 CCCCCAAATGAATAACATCAAATGG 58.943 40.000 0.00 0.00 38.38 3.16
2827 3320 5.528320 GCCCCCAAATGAATAACATCAAATG 59.472 40.000 0.00 0.00 38.38 2.32
2828 3321 5.429435 AGCCCCCAAATGAATAACATCAAAT 59.571 36.000 0.00 0.00 38.38 2.32
2829 3322 4.782156 AGCCCCCAAATGAATAACATCAAA 59.218 37.500 0.00 0.00 38.38 2.69
2830 3323 4.360889 AGCCCCCAAATGAATAACATCAA 58.639 39.130 0.00 0.00 38.38 2.57
2832 3325 4.892934 TGTAGCCCCCAAATGAATAACATC 59.107 41.667 0.00 0.00 38.38 3.06
2845 3339 0.909623 GCTTTCTAGTGTAGCCCCCA 59.090 55.000 0.00 0.00 0.00 4.96
2851 3345 3.511934 ACAGAGTGGGCTTTCTAGTGTAG 59.488 47.826 0.00 0.00 0.00 2.74
2886 3382 9.283768 CCAAAACAGATGTATATTGGTAGCATA 57.716 33.333 13.11 0.00 34.46 3.14
2895 3395 6.832520 TGTGTGCCAAAACAGATGTATATT 57.167 33.333 0.00 0.00 0.00 1.28
2930 3514 7.960738 ACGGTGTAATCTTTAACGATTGAATTG 59.039 33.333 15.44 6.88 35.40 2.32
2931 3515 7.960738 CACGGTGTAATCTTTAACGATTGAATT 59.039 33.333 15.44 0.00 35.40 2.17
2937 3521 6.814644 TCAATCACGGTGTAATCTTTAACGAT 59.185 34.615 8.17 0.00 0.00 3.73
2939 3523 6.397831 TCAATCACGGTGTAATCTTTAACG 57.602 37.500 8.17 0.00 0.00 3.18
2941 3525 7.972832 ACTTCAATCACGGTGTAATCTTTAA 57.027 32.000 8.17 0.00 0.00 1.52
2942 3526 7.972832 AACTTCAATCACGGTGTAATCTTTA 57.027 32.000 8.17 0.00 0.00 1.85
2944 3528 6.877611 AAACTTCAATCACGGTGTAATCTT 57.122 33.333 8.17 0.00 0.00 2.40
2948 3532 7.066043 ACAAGTTAAACTTCAATCACGGTGTAA 59.934 33.333 8.17 0.00 36.03 2.41
2951 3535 5.816919 ACAAGTTAAACTTCAATCACGGTG 58.183 37.500 0.56 0.56 36.03 4.94
2953 3537 5.173131 GCAACAAGTTAAACTTCAATCACGG 59.827 40.000 0.00 0.00 36.03 4.94
2954 3538 5.971202 AGCAACAAGTTAAACTTCAATCACG 59.029 36.000 0.00 0.00 36.03 4.35
2961 3546 9.595357 GTAATCTGTAGCAACAAGTTAAACTTC 57.405 33.333 0.00 0.00 36.03 3.01
2984 3569 6.775629 GGGTGCCAATTATTCTCATTAGGTAA 59.224 38.462 0.00 0.00 0.00 2.85
2988 3573 6.713762 TTGGGTGCCAATTATTCTCATTAG 57.286 37.500 0.00 0.00 38.75 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.