Multiple sequence alignment - TraesCS1A01G436700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G436700 chr1A 100.000 3974 0 0 1 3974 586731957 586727984 0.000000e+00 7339.0
1 TraesCS1A01G436700 chr1A 84.664 1102 135 17 1910 3000 290216410 290215332 0.000000e+00 1068.0
2 TraesCS1A01G436700 chr1A 85.118 887 113 9 3105 3974 290215201 290214317 0.000000e+00 889.0
3 TraesCS1A01G436700 chr1A 90.698 43 4 0 3169 3211 290215204 290215162 1.540000e-04 58.4
4 TraesCS1A01G436700 chr4A 98.743 3341 40 2 636 3974 90065734 90069074 0.000000e+00 5936.0
5 TraesCS1A01G436700 chr4A 98.801 3336 34 4 641 3974 502364851 502361520 0.000000e+00 5934.0
6 TraesCS1A01G436700 chr4A 98.205 3342 54 4 634 3974 90051378 90054714 0.000000e+00 5834.0
7 TraesCS1A01G436700 chr4A 98.046 614 11 1 636 1248 90070884 90071497 0.000000e+00 1066.0
8 TraesCS1A01G436700 chr7A 98.567 3350 32 2 641 3974 700287245 700290594 0.000000e+00 5906.0
9 TraesCS1A01G436700 chr7A 97.428 2061 46 4 640 2696 66691248 66689191 0.000000e+00 3506.0
10 TraesCS1A01G436700 chr7A 98.100 1263 23 1 641 1902 38955048 38953786 0.000000e+00 2198.0
11 TraesCS1A01G436700 chr7A 98.710 310 4 0 3665 3974 66689193 66688884 5.800000e-153 551.0
12 TraesCS1A01G436700 chr4B 96.317 1765 40 2 639 2378 532722201 532723965 0.000000e+00 2876.0
13 TraesCS1A01G436700 chr4B 85.419 919 115 12 3073 3974 87817498 87818414 0.000000e+00 937.0
14 TraesCS1A01G436700 chr4B 85.670 649 84 7 1912 2558 87816813 87817454 0.000000e+00 675.0
15 TraesCS1A01G436700 chr4B 86.842 114 10 4 3102 3211 87817457 87817569 5.390000e-24 122.0
16 TraesCS1A01G436700 chr4B 100.000 30 0 0 3169 3198 87817457 87817486 5.550000e-04 56.5
17 TraesCS1A01G436700 chr7B 98.478 1314 20 0 1714 3027 56998587 56997274 0.000000e+00 2316.0
18 TraesCS1A01G436700 chr7B 88.509 322 30 4 1 315 735986738 735987059 2.240000e-102 383.0
19 TraesCS1A01G436700 chr7B 100.000 28 0 0 616 643 498097433 498097406 7.000000e-03 52.8
20 TraesCS1A01G436700 chr4D 97.961 932 17 2 638 1568 82856468 82855538 0.000000e+00 1615.0
21 TraesCS1A01G436700 chr3D 97.746 710 10 2 1260 1968 253529120 253528416 0.000000e+00 1218.0
22 TraesCS1A01G436700 chr3D 94.744 742 15 1 639 1356 253529862 253529121 0.000000e+00 1133.0
23 TraesCS1A01G436700 chr2A 80.552 833 111 23 1905 2733 49923812 49923027 9.510000e-166 593.0
24 TraesCS1A01G436700 chr5D 86.213 573 46 12 1 568 379258881 379258337 1.230000e-164 590.0
25 TraesCS1A01G436700 chr2D 79.927 827 110 29 1905 2728 46373428 46372655 1.250000e-154 556.0
26 TraesCS1A01G436700 chr3B 95.584 317 7 1 1679 1995 805050300 805050609 5.930000e-138 501.0
27 TraesCS1A01G436700 chr3B 88.379 327 30 5 1 321 758628537 758628861 1.730000e-103 387.0
28 TraesCS1A01G436700 chr3B 87.316 339 36 4 1 332 685611673 685612011 8.060000e-102 381.0
29 TraesCS1A01G436700 chr6B 88.820 322 29 4 1 315 317752346 317752025 4.820000e-104 388.0
30 TraesCS1A01G436700 chr6B 87.537 337 32 5 1 331 260600984 260601316 8.060000e-102 381.0
31 TraesCS1A01G436700 chr5B 88.509 322 30 4 1 315 445179292 445179613 2.240000e-102 383.0
32 TraesCS1A01G436700 chr5B 85.960 349 39 6 1 342 448456065 448455720 8.120000e-97 364.0
33 TraesCS1A01G436700 chr1B 88.235 323 31 4 1 316 655851231 655850909 2.900000e-101 379.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G436700 chr1A 586727984 586731957 3973 True 7339.000 7339 100.000000 1 3974 1 chr1A.!!$R1 3973
1 TraesCS1A01G436700 chr1A 290214317 290216410 2093 True 671.800 1068 86.826667 1910 3974 3 chr1A.!!$R2 2064
2 TraesCS1A01G436700 chr4A 502361520 502364851 3331 True 5934.000 5934 98.801000 641 3974 1 chr4A.!!$R1 3333
3 TraesCS1A01G436700 chr4A 90051378 90054714 3336 False 5834.000 5834 98.205000 634 3974 1 chr4A.!!$F1 3340
4 TraesCS1A01G436700 chr4A 90065734 90071497 5763 False 3501.000 5936 98.394500 636 3974 2 chr4A.!!$F2 3338
5 TraesCS1A01G436700 chr7A 700287245 700290594 3349 False 5906.000 5906 98.567000 641 3974 1 chr7A.!!$F1 3333
6 TraesCS1A01G436700 chr7A 38953786 38955048 1262 True 2198.000 2198 98.100000 641 1902 1 chr7A.!!$R1 1261
7 TraesCS1A01G436700 chr7A 66688884 66691248 2364 True 2028.500 3506 98.069000 640 3974 2 chr7A.!!$R2 3334
8 TraesCS1A01G436700 chr4B 532722201 532723965 1764 False 2876.000 2876 96.317000 639 2378 1 chr4B.!!$F1 1739
9 TraesCS1A01G436700 chr4B 87816813 87818414 1601 False 447.625 937 89.482750 1912 3974 4 chr4B.!!$F2 2062
10 TraesCS1A01G436700 chr7B 56997274 56998587 1313 True 2316.000 2316 98.478000 1714 3027 1 chr7B.!!$R1 1313
11 TraesCS1A01G436700 chr4D 82855538 82856468 930 True 1615.000 1615 97.961000 638 1568 1 chr4D.!!$R1 930
12 TraesCS1A01G436700 chr3D 253528416 253529862 1446 True 1175.500 1218 96.245000 639 1968 2 chr3D.!!$R1 1329
13 TraesCS1A01G436700 chr2A 49923027 49923812 785 True 593.000 593 80.552000 1905 2733 1 chr2A.!!$R1 828
14 TraesCS1A01G436700 chr5D 379258337 379258881 544 True 590.000 590 86.213000 1 568 1 chr5D.!!$R1 567
15 TraesCS1A01G436700 chr2D 46372655 46373428 773 True 556.000 556 79.927000 1905 2728 1 chr2D.!!$R1 823

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
188 189 0.099436 GATGATGGCAACGCACCTTC 59.901 55.0 0.0 0.0 42.51 3.46 F
457 458 0.179032 ACGTCCACTCCAACAATGCA 60.179 50.0 0.0 0.0 0.00 3.96 F
533 534 0.306228 CGTCGTGTTGTTTGATGGCA 59.694 50.0 0.0 0.0 0.00 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1030 1033 4.373116 GGCTTCACGAGGTGCCGA 62.373 66.667 0.00 0.00 35.79 5.54 R
2952 3215 6.016555 ACCTTAGACCATTTTGCCAAATAGT 58.983 36.000 0.00 0.00 30.90 2.12 R
3457 3793 7.040132 GCCTAGCCTTTATTTTTATCATGAGCT 60.040 37.037 0.09 2.25 0.00 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.228749 TCGTCATTGTTCGTCTACGTTC 58.771 45.455 0.00 0.00 40.80 3.95
30 31 2.111756 GTTCGTCTACGTTCGTGTGTT 58.888 47.619 8.14 0.00 40.80 3.32
33 34 2.783284 TCGTCTACGTTCGTGTGTTTTC 59.217 45.455 8.14 0.00 40.80 2.29
37 38 0.740516 ACGTTCGTGTGTTTTCGGGT 60.741 50.000 0.00 0.00 0.00 5.28
38 39 0.374410 CGTTCGTGTGTTTTCGGGTT 59.626 50.000 0.00 0.00 0.00 4.11
39 40 1.817609 GTTCGTGTGTTTTCGGGTTG 58.182 50.000 0.00 0.00 0.00 3.77
40 41 0.733729 TTCGTGTGTTTTCGGGTTGG 59.266 50.000 0.00 0.00 0.00 3.77
41 42 0.107800 TCGTGTGTTTTCGGGTTGGA 60.108 50.000 0.00 0.00 0.00 3.53
42 43 0.948678 CGTGTGTTTTCGGGTTGGAT 59.051 50.000 0.00 0.00 0.00 3.41
43 44 1.069500 CGTGTGTTTTCGGGTTGGATC 60.069 52.381 0.00 0.00 0.00 3.36
44 45 2.227194 GTGTGTTTTCGGGTTGGATCT 58.773 47.619 0.00 0.00 0.00 2.75
45 46 2.621526 GTGTGTTTTCGGGTTGGATCTT 59.378 45.455 0.00 0.00 0.00 2.40
46 47 3.067601 GTGTGTTTTCGGGTTGGATCTTT 59.932 43.478 0.00 0.00 0.00 2.52
47 48 3.316868 TGTGTTTTCGGGTTGGATCTTTC 59.683 43.478 0.00 0.00 0.00 2.62
48 49 3.568430 GTGTTTTCGGGTTGGATCTTTCT 59.432 43.478 0.00 0.00 0.00 2.52
49 50 3.568007 TGTTTTCGGGTTGGATCTTTCTG 59.432 43.478 0.00 0.00 0.00 3.02
50 51 3.780804 TTTCGGGTTGGATCTTTCTGA 57.219 42.857 0.00 0.00 0.00 3.27
51 52 4.301072 TTTCGGGTTGGATCTTTCTGAT 57.699 40.909 0.00 0.00 38.27 2.90
71 72 9.486497 TTCTGATCTATGTTATTCTTCATCTGC 57.514 33.333 0.00 0.00 0.00 4.26
72 73 7.811713 TCTGATCTATGTTATTCTTCATCTGCG 59.188 37.037 0.00 0.00 0.00 5.18
73 74 6.870439 TGATCTATGTTATTCTTCATCTGCGG 59.130 38.462 0.00 0.00 0.00 5.69
74 75 4.991056 TCTATGTTATTCTTCATCTGCGGC 59.009 41.667 0.00 0.00 0.00 6.53
75 76 1.933181 TGTTATTCTTCATCTGCGGCG 59.067 47.619 0.51 0.51 0.00 6.46
76 77 1.261619 GTTATTCTTCATCTGCGGCGG 59.738 52.381 9.78 1.35 0.00 6.13
77 78 0.464036 TATTCTTCATCTGCGGCGGT 59.536 50.000 9.78 0.00 0.00 5.68
78 79 0.392998 ATTCTTCATCTGCGGCGGTT 60.393 50.000 9.78 0.00 0.00 4.44
79 80 1.298157 TTCTTCATCTGCGGCGGTTG 61.298 55.000 9.78 12.61 0.00 3.77
80 81 2.031919 TTCATCTGCGGCGGTTGT 59.968 55.556 17.01 0.00 0.00 3.32
81 82 1.577328 CTTCATCTGCGGCGGTTGTT 61.577 55.000 17.01 0.00 0.00 2.83
82 83 1.851021 TTCATCTGCGGCGGTTGTTG 61.851 55.000 17.01 8.14 0.00 3.33
83 84 3.055719 ATCTGCGGCGGTTGTTGG 61.056 61.111 9.78 0.00 0.00 3.77
84 85 3.842925 ATCTGCGGCGGTTGTTGGT 62.843 57.895 9.78 0.00 0.00 3.67
85 86 4.326766 CTGCGGCGGTTGTTGGTG 62.327 66.667 9.78 0.00 0.00 4.17
90 91 4.980903 GCGGTTGTTGGTGCGCTG 62.981 66.667 9.73 0.00 0.00 5.18
91 92 4.326766 CGGTTGTTGGTGCGCTGG 62.327 66.667 9.73 0.00 0.00 4.85
92 93 3.216292 GGTTGTTGGTGCGCTGGT 61.216 61.111 9.73 0.00 0.00 4.00
93 94 2.331451 GTTGTTGGTGCGCTGGTC 59.669 61.111 9.73 0.00 0.00 4.02
94 95 2.904866 TTGTTGGTGCGCTGGTCC 60.905 61.111 9.73 6.75 0.00 4.46
95 96 3.414136 TTGTTGGTGCGCTGGTCCT 62.414 57.895 9.73 0.00 0.00 3.85
96 97 2.046009 TTGTTGGTGCGCTGGTCCTA 62.046 55.000 9.73 0.22 0.00 2.94
97 98 1.078426 GTTGGTGCGCTGGTCCTAT 60.078 57.895 9.73 0.00 0.00 2.57
98 99 0.177141 GTTGGTGCGCTGGTCCTATA 59.823 55.000 9.73 0.00 0.00 1.31
99 100 0.906066 TTGGTGCGCTGGTCCTATAA 59.094 50.000 9.73 0.00 0.00 0.98
100 101 0.464036 TGGTGCGCTGGTCCTATAAG 59.536 55.000 9.73 0.00 0.00 1.73
101 102 0.249911 GGTGCGCTGGTCCTATAAGG 60.250 60.000 9.73 0.00 36.46 2.69
102 103 0.880718 GTGCGCTGGTCCTATAAGGC 60.881 60.000 9.73 0.00 34.61 4.35
103 104 1.301795 GCGCTGGTCCTATAAGGCC 60.302 63.158 0.00 0.00 34.61 5.19
104 105 1.759459 GCGCTGGTCCTATAAGGCCT 61.759 60.000 0.00 0.00 34.61 5.19
105 106 0.759346 CGCTGGTCCTATAAGGCCTT 59.241 55.000 24.18 24.18 34.61 4.35
106 107 1.968493 CGCTGGTCCTATAAGGCCTTA 59.032 52.381 27.11 27.11 34.61 2.69
107 108 2.028930 CGCTGGTCCTATAAGGCCTTAG 60.029 54.545 28.35 18.46 34.61 2.18
108 109 2.289756 GCTGGTCCTATAAGGCCTTAGC 60.290 54.545 28.35 21.42 34.61 3.09
109 110 2.972713 CTGGTCCTATAAGGCCTTAGCA 59.027 50.000 28.35 21.09 42.56 3.49
110 111 2.704065 TGGTCCTATAAGGCCTTAGCAC 59.296 50.000 28.35 20.01 42.56 4.40
111 112 2.288886 GGTCCTATAAGGCCTTAGCACG 60.289 54.545 28.35 16.06 42.56 5.34
112 113 2.626743 GTCCTATAAGGCCTTAGCACGA 59.373 50.000 28.35 17.85 42.56 4.35
113 114 2.626743 TCCTATAAGGCCTTAGCACGAC 59.373 50.000 28.35 0.00 42.56 4.34
114 115 2.607282 CCTATAAGGCCTTAGCACGACG 60.607 54.545 28.35 11.87 42.56 5.12
115 116 1.108776 ATAAGGCCTTAGCACGACGA 58.891 50.000 28.35 6.31 42.56 4.20
116 117 0.171903 TAAGGCCTTAGCACGACGAC 59.828 55.000 21.68 0.00 42.56 4.34
117 118 1.533469 AAGGCCTTAGCACGACGACT 61.533 55.000 18.87 0.59 42.56 4.18
118 119 1.080025 GGCCTTAGCACGACGACTT 60.080 57.895 0.00 0.00 42.56 3.01
119 120 1.077089 GGCCTTAGCACGACGACTTC 61.077 60.000 0.00 0.00 42.56 3.01
120 121 1.077089 GCCTTAGCACGACGACTTCC 61.077 60.000 0.00 0.00 39.53 3.46
121 122 0.458025 CCTTAGCACGACGACTTCCC 60.458 60.000 0.00 0.00 0.00 3.97
122 123 0.797249 CTTAGCACGACGACTTCCCG 60.797 60.000 0.00 0.00 0.00 5.14
123 124 1.236616 TTAGCACGACGACTTCCCGA 61.237 55.000 0.00 0.00 0.00 5.14
124 125 1.915614 TAGCACGACGACTTCCCGAC 61.916 60.000 0.00 0.00 0.00 4.79
125 126 2.952245 CACGACGACTTCCCGACT 59.048 61.111 0.00 0.00 0.00 4.18
126 127 1.442184 CACGACGACTTCCCGACTG 60.442 63.158 0.00 0.00 0.00 3.51
127 128 1.895707 ACGACGACTTCCCGACTGT 60.896 57.895 0.00 0.00 0.00 3.55
128 129 1.285023 CGACGACTTCCCGACTGTT 59.715 57.895 0.00 0.00 0.00 3.16
129 130 0.318445 CGACGACTTCCCGACTGTTT 60.318 55.000 0.00 0.00 0.00 2.83
130 131 1.069022 CGACGACTTCCCGACTGTTTA 60.069 52.381 0.00 0.00 0.00 2.01
131 132 2.323059 GACGACTTCCCGACTGTTTAC 58.677 52.381 0.00 0.00 0.00 2.01
132 133 1.959282 ACGACTTCCCGACTGTTTACT 59.041 47.619 0.00 0.00 0.00 2.24
133 134 3.149196 ACGACTTCCCGACTGTTTACTA 58.851 45.455 0.00 0.00 0.00 1.82
134 135 3.057946 ACGACTTCCCGACTGTTTACTAC 60.058 47.826 0.00 0.00 0.00 2.73
135 136 3.058016 CGACTTCCCGACTGTTTACTACA 60.058 47.826 0.00 0.00 34.95 2.74
136 137 4.557296 CGACTTCCCGACTGTTTACTACAA 60.557 45.833 0.00 0.00 36.02 2.41
137 138 4.625028 ACTTCCCGACTGTTTACTACAAC 58.375 43.478 0.00 0.00 36.02 3.32
138 139 4.099881 ACTTCCCGACTGTTTACTACAACA 59.900 41.667 0.00 0.00 36.02 3.33
139 140 4.669206 TCCCGACTGTTTACTACAACAA 57.331 40.909 0.00 0.00 36.22 2.83
140 141 4.624015 TCCCGACTGTTTACTACAACAAG 58.376 43.478 0.00 0.00 36.22 3.16
141 142 4.099881 TCCCGACTGTTTACTACAACAAGT 59.900 41.667 0.00 0.00 36.22 3.16
142 143 4.812626 CCCGACTGTTTACTACAACAAGTT 59.187 41.667 0.00 0.00 36.22 2.66
143 144 5.277154 CCCGACTGTTTACTACAACAAGTTG 60.277 44.000 11.16 11.16 45.58 3.16
152 153 2.404083 CAACAAGTTGTGCCCGACT 58.596 52.632 9.79 0.00 36.86 4.18
153 154 0.307760 CAACAAGTTGTGCCCGACTC 59.692 55.000 9.79 0.00 34.00 3.36
154 155 0.818040 AACAAGTTGTGCCCGACTCC 60.818 55.000 9.79 0.00 34.00 3.85
155 156 2.030562 AAGTTGTGCCCGACTCCG 59.969 61.111 0.00 0.00 34.00 4.63
172 173 4.530857 GGCGACGGAGGGGTGATG 62.531 72.222 0.00 0.00 0.00 3.07
173 174 3.458163 GCGACGGAGGGGTGATGA 61.458 66.667 0.00 0.00 0.00 2.92
174 175 2.797278 GCGACGGAGGGGTGATGAT 61.797 63.158 0.00 0.00 0.00 2.45
175 176 1.068083 CGACGGAGGGGTGATGATG 59.932 63.158 0.00 0.00 0.00 3.07
176 177 1.447643 GACGGAGGGGTGATGATGG 59.552 63.158 0.00 0.00 0.00 3.51
177 178 2.111878 CGGAGGGGTGATGATGGC 59.888 66.667 0.00 0.00 0.00 4.40
178 179 2.745308 CGGAGGGGTGATGATGGCA 61.745 63.158 0.00 0.00 0.00 4.92
179 180 1.614711 GGAGGGGTGATGATGGCAA 59.385 57.895 0.00 0.00 0.00 4.52
180 181 0.753111 GGAGGGGTGATGATGGCAAC 60.753 60.000 0.00 0.00 0.00 4.17
181 182 1.077501 AGGGGTGATGATGGCAACG 60.078 57.895 0.00 0.00 42.51 4.10
182 183 2.774799 GGGGTGATGATGGCAACGC 61.775 63.158 0.00 0.00 42.51 4.84
183 184 2.045708 GGGTGATGATGGCAACGCA 61.046 57.895 0.00 0.00 42.51 5.24
184 185 1.137404 GGTGATGATGGCAACGCAC 59.863 57.895 10.64 10.64 42.51 5.34
185 186 1.137404 GTGATGATGGCAACGCACC 59.863 57.895 8.66 0.00 42.51 5.01
186 187 1.002257 TGATGATGGCAACGCACCT 60.002 52.632 0.00 0.00 42.51 4.00
187 188 0.608856 TGATGATGGCAACGCACCTT 60.609 50.000 0.00 0.00 42.51 3.50
188 189 0.099436 GATGATGGCAACGCACCTTC 59.901 55.000 0.00 0.00 42.51 3.46
189 190 1.647545 ATGATGGCAACGCACCTTCG 61.648 55.000 0.00 0.00 42.51 3.79
190 191 3.039202 GATGGCAACGCACCTTCGG 62.039 63.158 0.00 0.00 42.51 4.30
193 194 4.090057 GCAACGCACCTTCGGCTC 62.090 66.667 0.00 0.00 0.00 4.70
194 195 3.777925 CAACGCACCTTCGGCTCG 61.778 66.667 0.00 0.00 0.00 5.03
198 199 3.491652 GCACCTTCGGCTCGCTTC 61.492 66.667 0.00 0.00 0.00 3.86
199 200 2.048222 CACCTTCGGCTCGCTTCA 60.048 61.111 0.00 0.00 0.00 3.02
200 201 2.097038 CACCTTCGGCTCGCTTCAG 61.097 63.158 0.00 0.00 0.00 3.02
201 202 2.262915 CCTTCGGCTCGCTTCAGT 59.737 61.111 0.00 0.00 0.00 3.41
202 203 2.097038 CCTTCGGCTCGCTTCAGTG 61.097 63.158 0.00 0.00 0.00 3.66
203 204 2.734673 CTTCGGCTCGCTTCAGTGC 61.735 63.158 0.00 0.00 0.00 4.40
204 205 3.226429 TTCGGCTCGCTTCAGTGCT 62.226 57.895 0.00 0.00 0.00 4.40
205 206 2.715532 TTCGGCTCGCTTCAGTGCTT 62.716 55.000 0.00 0.00 0.00 3.91
206 207 2.866028 GGCTCGCTTCAGTGCTTG 59.134 61.111 0.00 0.00 0.00 4.01
207 208 1.963338 GGCTCGCTTCAGTGCTTGT 60.963 57.895 0.00 0.00 0.00 3.16
208 209 0.670546 GGCTCGCTTCAGTGCTTGTA 60.671 55.000 0.00 0.00 0.00 2.41
209 210 0.718343 GCTCGCTTCAGTGCTTGTAG 59.282 55.000 0.00 0.00 0.00 2.74
210 211 1.937108 GCTCGCTTCAGTGCTTGTAGT 60.937 52.381 0.00 0.00 0.00 2.73
211 212 1.989165 CTCGCTTCAGTGCTTGTAGTC 59.011 52.381 0.00 0.00 0.00 2.59
212 213 0.710567 CGCTTCAGTGCTTGTAGTCG 59.289 55.000 0.00 0.00 0.00 4.18
213 214 1.784525 GCTTCAGTGCTTGTAGTCGT 58.215 50.000 0.00 0.00 0.00 4.34
214 215 2.135933 GCTTCAGTGCTTGTAGTCGTT 58.864 47.619 0.00 0.00 0.00 3.85
215 216 2.096713 GCTTCAGTGCTTGTAGTCGTTG 60.097 50.000 0.00 0.00 0.00 4.10
216 217 1.497991 TCAGTGCTTGTAGTCGTTGC 58.502 50.000 0.00 0.00 0.00 4.17
217 218 1.068588 TCAGTGCTTGTAGTCGTTGCT 59.931 47.619 0.00 0.00 0.00 3.91
218 219 2.295070 TCAGTGCTTGTAGTCGTTGCTA 59.705 45.455 0.00 0.00 0.00 3.49
219 220 2.663602 CAGTGCTTGTAGTCGTTGCTAG 59.336 50.000 0.00 0.00 0.00 3.42
220 221 2.557056 AGTGCTTGTAGTCGTTGCTAGA 59.443 45.455 0.00 0.00 0.00 2.43
221 222 2.662156 GTGCTTGTAGTCGTTGCTAGAC 59.338 50.000 0.00 0.00 38.81 2.59
222 223 1.912110 GCTTGTAGTCGTTGCTAGACG 59.088 52.381 0.00 0.00 42.97 4.18
223 224 2.516923 CTTGTAGTCGTTGCTAGACGG 58.483 52.381 4.36 0.00 42.98 4.79
224 225 1.527034 TGTAGTCGTTGCTAGACGGT 58.473 50.000 4.36 0.00 42.98 4.83
225 226 1.466167 TGTAGTCGTTGCTAGACGGTC 59.534 52.381 0.00 0.00 42.98 4.79
226 227 1.736681 GTAGTCGTTGCTAGACGGTCT 59.263 52.381 15.95 15.95 42.98 3.85
227 228 2.105006 AGTCGTTGCTAGACGGTCTA 57.895 50.000 16.50 16.50 42.98 2.59
228 229 1.736681 AGTCGTTGCTAGACGGTCTAC 59.263 52.381 13.70 11.15 42.98 2.59
238 239 2.754658 CGGTCTACGGGCCTGACT 60.755 66.667 21.41 0.00 39.42 3.41
239 240 2.893398 GGTCTACGGGCCTGACTG 59.107 66.667 21.41 7.74 0.00 3.51
240 241 1.982938 GGTCTACGGGCCTGACTGT 60.983 63.158 21.41 4.43 0.00 3.55
241 242 0.682209 GGTCTACGGGCCTGACTGTA 60.682 60.000 21.41 5.43 0.00 2.74
242 243 1.180029 GTCTACGGGCCTGACTGTAA 58.820 55.000 21.41 0.00 32.20 2.41
243 244 1.755380 GTCTACGGGCCTGACTGTAAT 59.245 52.381 21.41 0.00 32.20 1.89
244 245 2.167900 GTCTACGGGCCTGACTGTAATT 59.832 50.000 21.41 0.00 32.20 1.40
245 246 2.835764 TCTACGGGCCTGACTGTAATTT 59.164 45.455 21.41 0.00 32.20 1.82
246 247 2.579410 ACGGGCCTGACTGTAATTTT 57.421 45.000 21.41 0.00 0.00 1.82
247 248 2.871453 ACGGGCCTGACTGTAATTTTT 58.129 42.857 21.41 0.00 0.00 1.94
248 249 4.023726 ACGGGCCTGACTGTAATTTTTA 57.976 40.909 21.41 0.00 0.00 1.52
249 250 4.595986 ACGGGCCTGACTGTAATTTTTAT 58.404 39.130 21.41 0.00 0.00 1.40
250 251 5.014202 ACGGGCCTGACTGTAATTTTTATT 58.986 37.500 21.41 0.00 0.00 1.40
251 252 6.181908 ACGGGCCTGACTGTAATTTTTATTA 58.818 36.000 21.41 0.00 0.00 0.98
252 253 6.831868 ACGGGCCTGACTGTAATTTTTATTAT 59.168 34.615 21.41 0.00 0.00 1.28
253 254 7.340999 ACGGGCCTGACTGTAATTTTTATTATT 59.659 33.333 21.41 0.00 0.00 1.40
254 255 8.194769 CGGGCCTGACTGTAATTTTTATTATTT 58.805 33.333 5.28 0.00 0.00 1.40
255 256 9.529325 GGGCCTGACTGTAATTTTTATTATTTC 57.471 33.333 0.84 0.00 0.00 2.17
275 276 9.688091 TTATTTCTGGTATTTATTGTACTGCCA 57.312 29.630 0.00 0.00 0.00 4.92
276 277 8.766994 ATTTCTGGTATTTATTGTACTGCCAT 57.233 30.769 0.00 0.00 0.00 4.40
277 278 7.566760 TTCTGGTATTTATTGTACTGCCATG 57.433 36.000 0.00 0.00 0.00 3.66
278 279 6.894682 TCTGGTATTTATTGTACTGCCATGA 58.105 36.000 0.00 0.00 0.00 3.07
279 280 7.517320 TCTGGTATTTATTGTACTGCCATGAT 58.483 34.615 0.00 0.00 0.00 2.45
280 281 7.998383 TCTGGTATTTATTGTACTGCCATGATT 59.002 33.333 0.00 0.00 0.00 2.57
281 282 7.939782 TGGTATTTATTGTACTGCCATGATTG 58.060 34.615 0.00 0.00 0.00 2.67
282 283 7.777440 TGGTATTTATTGTACTGCCATGATTGA 59.223 33.333 0.00 0.00 0.00 2.57
283 284 8.629158 GGTATTTATTGTACTGCCATGATTGAA 58.371 33.333 0.00 0.00 0.00 2.69
287 288 8.929827 TTATTGTACTGCCATGATTGAAAATG 57.070 30.769 0.00 0.00 0.00 2.32
288 289 6.587206 TTGTACTGCCATGATTGAAAATGA 57.413 33.333 0.00 0.00 0.00 2.57
289 290 6.587206 TGTACTGCCATGATTGAAAATGAA 57.413 33.333 0.00 0.00 0.00 2.57
290 291 7.172868 TGTACTGCCATGATTGAAAATGAAT 57.827 32.000 0.00 0.00 0.00 2.57
291 292 8.291191 TGTACTGCCATGATTGAAAATGAATA 57.709 30.769 0.00 0.00 0.00 1.75
292 293 8.407832 TGTACTGCCATGATTGAAAATGAATAG 58.592 33.333 0.00 0.00 0.00 1.73
293 294 6.812998 ACTGCCATGATTGAAAATGAATAGG 58.187 36.000 0.00 0.00 0.00 2.57
294 295 6.381994 ACTGCCATGATTGAAAATGAATAGGT 59.618 34.615 0.00 0.00 0.00 3.08
295 296 6.808829 TGCCATGATTGAAAATGAATAGGTC 58.191 36.000 0.00 0.00 0.00 3.85
296 297 5.916883 GCCATGATTGAAAATGAATAGGTCG 59.083 40.000 0.00 0.00 0.00 4.79
297 298 6.238731 GCCATGATTGAAAATGAATAGGTCGA 60.239 38.462 0.00 0.00 0.00 4.20
298 299 7.681782 GCCATGATTGAAAATGAATAGGTCGAA 60.682 37.037 0.00 0.00 0.00 3.71
299 300 8.190122 CCATGATTGAAAATGAATAGGTCGAAA 58.810 33.333 0.00 0.00 0.00 3.46
300 301 9.740239 CATGATTGAAAATGAATAGGTCGAAAT 57.260 29.630 0.00 0.00 0.00 2.17
338 339 7.463469 AGTAAAGCAAAAGAAAAATGAACCG 57.537 32.000 0.00 0.00 0.00 4.44
339 340 7.262048 AGTAAAGCAAAAGAAAAATGAACCGA 58.738 30.769 0.00 0.00 0.00 4.69
340 341 6.588348 AAAGCAAAAGAAAAATGAACCGAG 57.412 33.333 0.00 0.00 0.00 4.63
341 342 5.514274 AGCAAAAGAAAAATGAACCGAGA 57.486 34.783 0.00 0.00 0.00 4.04
342 343 5.901552 AGCAAAAGAAAAATGAACCGAGAA 58.098 33.333 0.00 0.00 0.00 2.87
343 344 6.337356 AGCAAAAGAAAAATGAACCGAGAAA 58.663 32.000 0.00 0.00 0.00 2.52
344 345 6.816140 AGCAAAAGAAAAATGAACCGAGAAAA 59.184 30.769 0.00 0.00 0.00 2.29
345 346 7.333174 AGCAAAAGAAAAATGAACCGAGAAAAA 59.667 29.630 0.00 0.00 0.00 1.94
346 347 8.122330 GCAAAAGAAAAATGAACCGAGAAAAAT 58.878 29.630 0.00 0.00 0.00 1.82
353 354 9.981114 AAAAATGAACCGAGAAAAATATTGAGT 57.019 25.926 0.00 0.00 0.00 3.41
354 355 9.981114 AAAATGAACCGAGAAAAATATTGAGTT 57.019 25.926 0.00 0.00 0.00 3.01
355 356 9.981114 AAATGAACCGAGAAAAATATTGAGTTT 57.019 25.926 0.00 0.00 0.00 2.66
356 357 9.981114 AATGAACCGAGAAAAATATTGAGTTTT 57.019 25.926 0.00 0.00 35.64 2.43
357 358 8.795786 TGAACCGAGAAAAATATTGAGTTTTG 57.204 30.769 0.00 0.00 33.20 2.44
358 359 7.865385 TGAACCGAGAAAAATATTGAGTTTTGG 59.135 33.333 0.00 0.00 33.20 3.28
359 360 7.519032 ACCGAGAAAAATATTGAGTTTTGGA 57.481 32.000 0.00 0.00 33.20 3.53
360 361 7.593825 ACCGAGAAAAATATTGAGTTTTGGAG 58.406 34.615 0.00 0.00 33.20 3.86
361 362 6.528072 CCGAGAAAAATATTGAGTTTTGGAGC 59.472 38.462 0.00 0.00 33.20 4.70
362 363 7.083858 CGAGAAAAATATTGAGTTTTGGAGCA 58.916 34.615 0.00 0.00 33.20 4.26
363 364 7.061094 CGAGAAAAATATTGAGTTTTGGAGCAC 59.939 37.037 0.00 0.00 33.20 4.40
364 365 7.154656 AGAAAAATATTGAGTTTTGGAGCACC 58.845 34.615 0.00 0.00 33.20 5.01
365 366 6.418057 AAAATATTGAGTTTTGGAGCACCA 57.582 33.333 0.00 0.00 45.34 4.17
366 367 6.610075 AAATATTGAGTTTTGGAGCACCAT 57.390 33.333 2.87 0.00 46.34 3.55
367 368 6.610075 AATATTGAGTTTTGGAGCACCATT 57.390 33.333 2.87 0.00 46.34 3.16
368 369 4.961438 ATTGAGTTTTGGAGCACCATTT 57.039 36.364 2.87 0.00 46.34 2.32
369 370 4.751767 TTGAGTTTTGGAGCACCATTTT 57.248 36.364 2.87 0.00 46.34 1.82
370 371 4.751767 TGAGTTTTGGAGCACCATTTTT 57.248 36.364 2.87 0.00 46.34 1.94
389 390 3.515071 TTTTCAACGCTCGAGTTTAGC 57.485 42.857 15.13 0.00 36.60 3.09
390 391 1.425412 TTCAACGCTCGAGTTTAGCC 58.575 50.000 15.13 0.00 36.60 3.93
391 392 0.601558 TCAACGCTCGAGTTTAGCCT 59.398 50.000 15.13 0.00 36.60 4.58
392 393 0.716108 CAACGCTCGAGTTTAGCCTG 59.284 55.000 15.13 0.00 36.60 4.85
393 394 0.317479 AACGCTCGAGTTTAGCCTGT 59.683 50.000 15.13 0.00 36.60 4.00
394 395 0.317479 ACGCTCGAGTTTAGCCTGTT 59.683 50.000 15.13 0.00 36.60 3.16
395 396 1.270147 ACGCTCGAGTTTAGCCTGTTT 60.270 47.619 15.13 0.00 36.60 2.83
396 397 1.798813 CGCTCGAGTTTAGCCTGTTTT 59.201 47.619 15.13 0.00 36.60 2.43
397 398 2.159827 CGCTCGAGTTTAGCCTGTTTTC 60.160 50.000 15.13 0.00 36.60 2.29
398 399 2.806244 GCTCGAGTTTAGCCTGTTTTCA 59.194 45.455 15.13 0.00 33.73 2.69
399 400 3.437049 GCTCGAGTTTAGCCTGTTTTCAT 59.563 43.478 15.13 0.00 33.73 2.57
400 401 4.083271 GCTCGAGTTTAGCCTGTTTTCATT 60.083 41.667 15.13 0.00 33.73 2.57
401 402 5.607119 TCGAGTTTAGCCTGTTTTCATTC 57.393 39.130 0.00 0.00 0.00 2.67
402 403 5.305585 TCGAGTTTAGCCTGTTTTCATTCT 58.694 37.500 0.00 0.00 0.00 2.40
403 404 5.408604 TCGAGTTTAGCCTGTTTTCATTCTC 59.591 40.000 0.00 0.00 0.00 2.87
404 405 5.409826 CGAGTTTAGCCTGTTTTCATTCTCT 59.590 40.000 0.00 0.00 0.00 3.10
405 406 6.590292 CGAGTTTAGCCTGTTTTCATTCTCTA 59.410 38.462 0.00 0.00 0.00 2.43
406 407 7.117812 CGAGTTTAGCCTGTTTTCATTCTCTAA 59.882 37.037 0.00 0.00 0.00 2.10
407 408 8.329203 AGTTTAGCCTGTTTTCATTCTCTAAG 57.671 34.615 0.00 0.00 0.00 2.18
408 409 7.939588 AGTTTAGCCTGTTTTCATTCTCTAAGT 59.060 33.333 0.00 0.00 0.00 2.24
409 410 8.568794 GTTTAGCCTGTTTTCATTCTCTAAGTT 58.431 33.333 0.00 0.00 0.00 2.66
410 411 8.691661 TTAGCCTGTTTTCATTCTCTAAGTTT 57.308 30.769 0.00 0.00 0.00 2.66
411 412 7.588497 AGCCTGTTTTCATTCTCTAAGTTTT 57.412 32.000 0.00 0.00 0.00 2.43
412 413 8.011844 AGCCTGTTTTCATTCTCTAAGTTTTT 57.988 30.769 0.00 0.00 0.00 1.94
413 414 9.131791 AGCCTGTTTTCATTCTCTAAGTTTTTA 57.868 29.630 0.00 0.00 0.00 1.52
414 415 9.181805 GCCTGTTTTCATTCTCTAAGTTTTTAC 57.818 33.333 0.00 0.00 0.00 2.01
422 423 9.778741 TCATTCTCTAAGTTTTTACACATCAGT 57.221 29.630 0.00 0.00 0.00 3.41
425 426 8.294341 TCTCTAAGTTTTTACACATCAGTTCG 57.706 34.615 0.00 0.00 0.00 3.95
426 427 7.384115 TCTCTAAGTTTTTACACATCAGTTCGG 59.616 37.037 0.00 0.00 0.00 4.30
427 428 4.483476 AGTTTTTACACATCAGTTCGGC 57.517 40.909 0.00 0.00 0.00 5.54
428 429 4.134563 AGTTTTTACACATCAGTTCGGCT 58.865 39.130 0.00 0.00 0.00 5.52
429 430 4.578928 AGTTTTTACACATCAGTTCGGCTT 59.421 37.500 0.00 0.00 0.00 4.35
430 431 5.067283 AGTTTTTACACATCAGTTCGGCTTT 59.933 36.000 0.00 0.00 0.00 3.51
431 432 6.261381 AGTTTTTACACATCAGTTCGGCTTTA 59.739 34.615 0.00 0.00 0.00 1.85
432 433 5.856126 TTTACACATCAGTTCGGCTTTAG 57.144 39.130 0.00 0.00 0.00 1.85
433 434 3.678056 ACACATCAGTTCGGCTTTAGA 57.322 42.857 0.00 0.00 0.00 2.10
434 435 4.207891 ACACATCAGTTCGGCTTTAGAT 57.792 40.909 0.00 0.00 0.00 1.98
435 436 4.184629 ACACATCAGTTCGGCTTTAGATC 58.815 43.478 0.00 0.00 0.00 2.75
436 437 3.557595 CACATCAGTTCGGCTTTAGATCC 59.442 47.826 0.00 0.00 0.00 3.36
437 438 3.197766 ACATCAGTTCGGCTTTAGATCCA 59.802 43.478 0.00 0.00 0.00 3.41
438 439 3.973206 TCAGTTCGGCTTTAGATCCAA 57.027 42.857 0.00 0.00 0.00 3.53
439 440 3.596214 TCAGTTCGGCTTTAGATCCAAC 58.404 45.455 0.00 0.00 0.00 3.77
440 441 2.348666 CAGTTCGGCTTTAGATCCAACG 59.651 50.000 0.00 0.00 0.00 4.10
441 442 2.028385 AGTTCGGCTTTAGATCCAACGT 60.028 45.455 0.00 0.00 0.00 3.99
442 443 2.288961 TCGGCTTTAGATCCAACGTC 57.711 50.000 0.00 0.00 0.00 4.34
443 444 1.134907 TCGGCTTTAGATCCAACGTCC 60.135 52.381 0.00 0.00 0.00 4.79
444 445 1.404986 CGGCTTTAGATCCAACGTCCA 60.405 52.381 0.00 0.00 0.00 4.02
445 446 2.007608 GGCTTTAGATCCAACGTCCAC 58.992 52.381 0.00 0.00 0.00 4.02
446 447 2.354805 GGCTTTAGATCCAACGTCCACT 60.355 50.000 0.00 0.00 0.00 4.00
447 448 2.930682 GCTTTAGATCCAACGTCCACTC 59.069 50.000 0.00 0.00 0.00 3.51
448 449 3.522553 CTTTAGATCCAACGTCCACTCC 58.477 50.000 0.00 0.00 0.00 3.85
449 450 2.225382 TAGATCCAACGTCCACTCCA 57.775 50.000 0.00 0.00 0.00 3.86
450 451 1.348064 AGATCCAACGTCCACTCCAA 58.652 50.000 0.00 0.00 0.00 3.53
451 452 1.002087 AGATCCAACGTCCACTCCAAC 59.998 52.381 0.00 0.00 0.00 3.77
452 453 0.762418 ATCCAACGTCCACTCCAACA 59.238 50.000 0.00 0.00 0.00 3.33
453 454 0.542333 TCCAACGTCCACTCCAACAA 59.458 50.000 0.00 0.00 0.00 2.83
454 455 1.142060 TCCAACGTCCACTCCAACAAT 59.858 47.619 0.00 0.00 0.00 2.71
455 456 1.266718 CCAACGTCCACTCCAACAATG 59.733 52.381 0.00 0.00 0.00 2.82
456 457 0.951558 AACGTCCACTCCAACAATGC 59.048 50.000 0.00 0.00 0.00 3.56
457 458 0.179032 ACGTCCACTCCAACAATGCA 60.179 50.000 0.00 0.00 0.00 3.96
458 459 0.950836 CGTCCACTCCAACAATGCAA 59.049 50.000 0.00 0.00 0.00 4.08
459 460 1.541147 CGTCCACTCCAACAATGCAAT 59.459 47.619 0.00 0.00 0.00 3.56
460 461 2.414559 CGTCCACTCCAACAATGCAATC 60.415 50.000 0.00 0.00 0.00 2.67
461 462 1.811965 TCCACTCCAACAATGCAATCG 59.188 47.619 0.00 0.00 0.00 3.34
462 463 1.811965 CCACTCCAACAATGCAATCGA 59.188 47.619 0.00 0.00 0.00 3.59
463 464 2.228582 CCACTCCAACAATGCAATCGAA 59.771 45.455 0.00 0.00 0.00 3.71
464 465 3.236816 CACTCCAACAATGCAATCGAAC 58.763 45.455 0.00 0.00 0.00 3.95
465 466 2.884012 ACTCCAACAATGCAATCGAACA 59.116 40.909 0.00 0.00 0.00 3.18
466 467 3.507233 ACTCCAACAATGCAATCGAACAT 59.493 39.130 0.00 0.00 0.00 2.71
467 468 4.095410 TCCAACAATGCAATCGAACATC 57.905 40.909 0.00 0.00 0.00 3.06
468 469 2.847717 CCAACAATGCAATCGAACATCG 59.152 45.455 0.00 0.00 42.10 3.84
469 470 2.178474 ACAATGCAATCGAACATCGC 57.822 45.000 0.00 0.00 40.21 4.58
470 471 1.106933 CAATGCAATCGAACATCGCG 58.893 50.000 0.00 0.00 40.21 5.87
471 472 0.589729 AATGCAATCGAACATCGCGC 60.590 50.000 0.00 0.00 40.21 6.86
472 473 2.351210 GCAATCGAACATCGCGCC 60.351 61.111 0.00 0.00 40.21 6.53
473 474 3.088914 CAATCGAACATCGCGCCA 58.911 55.556 0.00 0.00 40.21 5.69
474 475 1.423450 CAATCGAACATCGCGCCAA 59.577 52.632 0.00 0.00 40.21 4.52
475 476 0.587242 CAATCGAACATCGCGCCAAG 60.587 55.000 0.00 0.00 40.21 3.61
476 477 1.705337 AATCGAACATCGCGCCAAGG 61.705 55.000 0.00 0.00 40.21 3.61
477 478 2.852495 ATCGAACATCGCGCCAAGGT 62.852 55.000 0.00 0.00 40.21 3.50
478 479 2.677003 CGAACATCGCGCCAAGGTT 61.677 57.895 0.00 4.23 31.14 3.50
479 480 1.134694 GAACATCGCGCCAAGGTTC 59.865 57.895 16.03 16.03 0.00 3.62
480 481 2.563086 GAACATCGCGCCAAGGTTCG 62.563 60.000 16.03 0.00 0.00 3.95
481 482 3.118454 CATCGCGCCAAGGTTCGT 61.118 61.111 0.00 0.00 0.00 3.85
482 483 2.358247 ATCGCGCCAAGGTTCGTT 60.358 55.556 0.00 0.00 0.00 3.85
483 484 2.388232 ATCGCGCCAAGGTTCGTTC 61.388 57.895 0.00 0.00 0.00 3.95
484 485 2.781595 ATCGCGCCAAGGTTCGTTCT 62.782 55.000 0.00 0.00 0.00 3.01
485 486 1.735198 CGCGCCAAGGTTCGTTCTA 60.735 57.895 0.00 0.00 0.00 2.10
486 487 1.785951 GCGCCAAGGTTCGTTCTAC 59.214 57.895 0.00 0.00 0.00 2.59
487 488 0.669625 GCGCCAAGGTTCGTTCTACT 60.670 55.000 0.00 0.00 0.00 2.57
488 489 1.403249 GCGCCAAGGTTCGTTCTACTA 60.403 52.381 0.00 0.00 0.00 1.82
489 490 2.737679 GCGCCAAGGTTCGTTCTACTAT 60.738 50.000 0.00 0.00 0.00 2.12
490 491 3.489738 GCGCCAAGGTTCGTTCTACTATA 60.490 47.826 0.00 0.00 0.00 1.31
491 492 4.675510 CGCCAAGGTTCGTTCTACTATAA 58.324 43.478 0.00 0.00 0.00 0.98
492 493 4.738740 CGCCAAGGTTCGTTCTACTATAAG 59.261 45.833 0.00 0.00 0.00 1.73
493 494 5.449588 CGCCAAGGTTCGTTCTACTATAAGA 60.450 44.000 0.00 0.00 0.00 2.10
494 495 6.514063 GCCAAGGTTCGTTCTACTATAAGAT 58.486 40.000 0.00 0.00 0.00 2.40
495 496 6.985059 GCCAAGGTTCGTTCTACTATAAGATT 59.015 38.462 0.00 0.00 0.00 2.40
496 497 7.169476 GCCAAGGTTCGTTCTACTATAAGATTC 59.831 40.741 0.00 0.00 0.00 2.52
497 498 7.652507 CCAAGGTTCGTTCTACTATAAGATTCC 59.347 40.741 0.00 0.00 0.00 3.01
498 499 7.893124 AGGTTCGTTCTACTATAAGATTCCA 57.107 36.000 0.00 0.00 0.00 3.53
499 500 8.480133 AGGTTCGTTCTACTATAAGATTCCAT 57.520 34.615 0.00 0.00 0.00 3.41
500 501 9.584008 AGGTTCGTTCTACTATAAGATTCCATA 57.416 33.333 0.00 0.00 0.00 2.74
501 502 9.623350 GGTTCGTTCTACTATAAGATTCCATAC 57.377 37.037 0.00 0.00 0.00 2.39
502 503 9.623350 GTTCGTTCTACTATAAGATTCCATACC 57.377 37.037 0.00 0.00 0.00 2.73
503 504 8.037382 TCGTTCTACTATAAGATTCCATACCG 57.963 38.462 0.00 0.00 0.00 4.02
504 505 7.879677 TCGTTCTACTATAAGATTCCATACCGA 59.120 37.037 0.00 0.00 0.00 4.69
505 506 8.509690 CGTTCTACTATAAGATTCCATACCGAA 58.490 37.037 0.00 0.00 0.00 4.30
508 509 9.803507 TCTACTATAAGATTCCATACCGAAAGA 57.196 33.333 0.00 0.00 0.00 2.52
511 512 9.930693 ACTATAAGATTCCATACCGAAAGATTC 57.069 33.333 0.00 0.00 0.00 2.52
512 513 9.372369 CTATAAGATTCCATACCGAAAGATTCC 57.628 37.037 0.00 0.00 0.00 3.01
513 514 5.896073 AGATTCCATACCGAAAGATTCCT 57.104 39.130 0.00 0.00 0.00 3.36
514 515 5.859495 AGATTCCATACCGAAAGATTCCTC 58.141 41.667 0.00 0.00 0.00 3.71
515 516 3.728076 TCCATACCGAAAGATTCCTCG 57.272 47.619 0.00 0.02 34.83 4.63
516 517 3.028850 TCCATACCGAAAGATTCCTCGT 58.971 45.455 5.38 0.00 33.17 4.18
517 518 3.067742 TCCATACCGAAAGATTCCTCGTC 59.932 47.826 5.38 0.00 33.17 4.20
518 519 2.838386 TACCGAAAGATTCCTCGTCG 57.162 50.000 5.38 0.00 35.10 5.12
519 520 0.886563 ACCGAAAGATTCCTCGTCGT 59.113 50.000 0.00 0.00 34.14 4.34
520 521 1.269166 CCGAAAGATTCCTCGTCGTG 58.731 55.000 0.00 0.00 34.14 4.35
521 522 1.402456 CCGAAAGATTCCTCGTCGTGT 60.402 52.381 0.00 0.00 34.14 4.49
522 523 2.325761 CGAAAGATTCCTCGTCGTGTT 58.674 47.619 0.00 0.00 32.46 3.32
523 524 2.090658 CGAAAGATTCCTCGTCGTGTTG 59.909 50.000 0.00 0.00 32.46 3.33
524 525 2.814280 AAGATTCCTCGTCGTGTTGT 57.186 45.000 0.00 0.00 0.00 3.32
525 526 2.814280 AGATTCCTCGTCGTGTTGTT 57.186 45.000 0.00 0.00 0.00 2.83
526 527 3.107642 AGATTCCTCGTCGTGTTGTTT 57.892 42.857 0.00 0.00 0.00 2.83
527 528 2.800544 AGATTCCTCGTCGTGTTGTTTG 59.199 45.455 0.00 0.00 0.00 2.93
528 529 2.296831 TTCCTCGTCGTGTTGTTTGA 57.703 45.000 0.00 0.00 0.00 2.69
529 530 2.519377 TCCTCGTCGTGTTGTTTGAT 57.481 45.000 0.00 0.00 0.00 2.57
530 531 2.131972 TCCTCGTCGTGTTGTTTGATG 58.868 47.619 0.00 0.00 0.00 3.07
531 532 1.194547 CCTCGTCGTGTTGTTTGATGG 59.805 52.381 0.00 0.00 0.00 3.51
532 533 0.584396 TCGTCGTGTTGTTTGATGGC 59.416 50.000 0.00 0.00 0.00 4.40
533 534 0.306228 CGTCGTGTTGTTTGATGGCA 59.694 50.000 0.00 0.00 0.00 4.92
534 535 1.069296 CGTCGTGTTGTTTGATGGCAT 60.069 47.619 0.00 0.00 0.00 4.40
535 536 2.604373 CGTCGTGTTGTTTGATGGCATT 60.604 45.455 0.00 0.00 0.00 3.56
536 537 2.725723 GTCGTGTTGTTTGATGGCATTG 59.274 45.455 0.00 0.00 0.00 2.82
537 538 2.620585 TCGTGTTGTTTGATGGCATTGA 59.379 40.909 0.00 0.00 0.00 2.57
538 539 3.067320 TCGTGTTGTTTGATGGCATTGAA 59.933 39.130 0.00 0.00 0.00 2.69
539 540 3.801050 CGTGTTGTTTGATGGCATTGAAA 59.199 39.130 0.00 1.33 0.00 2.69
540 541 4.269603 CGTGTTGTTTGATGGCATTGAAAA 59.730 37.500 0.00 0.60 0.00 2.29
541 542 5.050227 CGTGTTGTTTGATGGCATTGAAAAT 60.050 36.000 0.00 0.00 0.00 1.82
542 543 6.365050 GTGTTGTTTGATGGCATTGAAAATC 58.635 36.000 0.00 0.00 0.00 2.17
543 544 5.177142 TGTTGTTTGATGGCATTGAAAATCG 59.823 36.000 0.00 0.00 0.00 3.34
544 545 4.880759 TGTTTGATGGCATTGAAAATCGT 58.119 34.783 0.00 0.00 0.00 3.73
545 546 4.685165 TGTTTGATGGCATTGAAAATCGTG 59.315 37.500 0.00 0.00 0.00 4.35
546 547 4.517952 TTGATGGCATTGAAAATCGTGT 57.482 36.364 0.00 0.00 0.00 4.49
547 548 4.517952 TGATGGCATTGAAAATCGTGTT 57.482 36.364 0.00 0.00 0.00 3.32
548 549 5.635417 TGATGGCATTGAAAATCGTGTTA 57.365 34.783 0.00 0.00 0.00 2.41
549 550 5.639757 TGATGGCATTGAAAATCGTGTTAG 58.360 37.500 0.00 0.00 0.00 2.34
550 551 5.414144 TGATGGCATTGAAAATCGTGTTAGA 59.586 36.000 0.00 0.00 0.00 2.10
551 552 5.697473 TGGCATTGAAAATCGTGTTAGAA 57.303 34.783 0.00 0.00 0.00 2.10
552 553 6.078202 TGGCATTGAAAATCGTGTTAGAAA 57.922 33.333 0.00 0.00 0.00 2.52
553 554 6.686630 TGGCATTGAAAATCGTGTTAGAAAT 58.313 32.000 0.00 0.00 0.00 2.17
554 555 6.585702 TGGCATTGAAAATCGTGTTAGAAATG 59.414 34.615 0.00 0.00 0.00 2.32
555 556 6.806249 GGCATTGAAAATCGTGTTAGAAATGA 59.194 34.615 0.00 0.00 0.00 2.57
556 557 7.328249 GGCATTGAAAATCGTGTTAGAAATGAA 59.672 33.333 0.00 0.00 0.00 2.57
557 558 8.155923 GCATTGAAAATCGTGTTAGAAATGAAC 58.844 33.333 0.00 0.00 0.00 3.18
558 559 7.830217 TTGAAAATCGTGTTAGAAATGAACG 57.170 32.000 0.00 0.00 35.64 3.95
559 560 6.367421 TGAAAATCGTGTTAGAAATGAACGG 58.633 36.000 0.00 0.00 35.08 4.44
560 561 5.934935 AAATCGTGTTAGAAATGAACGGT 57.065 34.783 0.00 0.00 35.08 4.83
561 562 5.934935 AATCGTGTTAGAAATGAACGGTT 57.065 34.783 0.00 0.00 33.07 4.44
562 563 4.718858 TCGTGTTAGAAATGAACGGTTG 57.281 40.909 0.00 0.00 35.08 3.77
563 564 4.121317 TCGTGTTAGAAATGAACGGTTGT 58.879 39.130 0.00 0.00 35.08 3.32
564 565 5.288015 TCGTGTTAGAAATGAACGGTTGTA 58.712 37.500 0.00 0.00 35.08 2.41
565 566 5.403166 TCGTGTTAGAAATGAACGGTTGTAG 59.597 40.000 0.00 0.00 35.08 2.74
566 567 5.176223 CGTGTTAGAAATGAACGGTTGTAGT 59.824 40.000 0.00 0.00 0.00 2.73
567 568 6.363088 CGTGTTAGAAATGAACGGTTGTAGTA 59.637 38.462 0.00 0.00 0.00 1.82
568 569 7.504818 GTGTTAGAAATGAACGGTTGTAGTAC 58.495 38.462 0.00 0.00 0.00 2.73
569 570 7.383300 GTGTTAGAAATGAACGGTTGTAGTACT 59.617 37.037 0.00 0.00 0.00 2.73
570 571 8.575589 TGTTAGAAATGAACGGTTGTAGTACTA 58.424 33.333 0.00 0.00 0.00 1.82
571 572 9.410556 GTTAGAAATGAACGGTTGTAGTACTAA 57.589 33.333 3.61 0.00 0.00 2.24
572 573 9.630098 TTAGAAATGAACGGTTGTAGTACTAAG 57.370 33.333 3.61 0.00 0.00 2.18
573 574 7.664758 AGAAATGAACGGTTGTAGTACTAAGT 58.335 34.615 3.61 0.00 0.00 2.24
574 575 8.796475 AGAAATGAACGGTTGTAGTACTAAGTA 58.204 33.333 3.61 0.00 0.00 2.24
575 576 8.748380 AAATGAACGGTTGTAGTACTAAGTAC 57.252 34.615 3.61 3.25 39.10 2.73
577 578 7.510549 TGAACGGTTGTAGTACTAAGTACTT 57.489 36.000 13.68 13.68 45.68 2.24
578 579 7.940850 TGAACGGTTGTAGTACTAAGTACTTT 58.059 34.615 14.49 0.00 45.68 2.66
579 580 8.076178 TGAACGGTTGTAGTACTAAGTACTTTC 58.924 37.037 14.49 9.83 45.68 2.62
580 581 7.751768 ACGGTTGTAGTACTAAGTACTTTCT 57.248 36.000 14.49 9.84 45.68 2.52
581 582 7.811653 ACGGTTGTAGTACTAAGTACTTTCTC 58.188 38.462 14.49 2.90 45.68 2.87
582 583 7.663493 ACGGTTGTAGTACTAAGTACTTTCTCT 59.337 37.037 14.49 9.84 45.68 3.10
583 584 7.961827 CGGTTGTAGTACTAAGTACTTTCTCTG 59.038 40.741 14.49 2.54 45.68 3.35
584 585 8.791675 GGTTGTAGTACTAAGTACTTTCTCTGT 58.208 37.037 14.49 8.01 45.68 3.41
585 586 9.824534 GTTGTAGTACTAAGTACTTTCTCTGTC 57.175 37.037 14.49 1.79 45.68 3.51
586 587 9.790344 TTGTAGTACTAAGTACTTTCTCTGTCT 57.210 33.333 14.49 6.51 45.68 3.41
587 588 9.434420 TGTAGTACTAAGTACTTTCTCTGTCTC 57.566 37.037 14.49 0.00 45.68 3.36
588 589 9.434420 GTAGTACTAAGTACTTTCTCTGTCTCA 57.566 37.037 14.49 0.00 45.68 3.27
590 591 8.952278 AGTACTAAGTACTTTCTCTGTCTCATG 58.048 37.037 14.49 0.00 45.68 3.07
591 592 8.948145 GTACTAAGTACTTTCTCTGTCTCATGA 58.052 37.037 14.49 0.00 36.25 3.07
592 593 8.588290 ACTAAGTACTTTCTCTGTCTCATGAT 57.412 34.615 14.49 0.00 0.00 2.45
593 594 9.688091 ACTAAGTACTTTCTCTGTCTCATGATA 57.312 33.333 14.49 0.00 0.00 2.15
608 609 9.816354 TGTCTCATGATATAAGAACATTTTCGA 57.184 29.630 0.00 0.00 36.78 3.71
610 611 9.816354 TCTCATGATATAAGAACATTTTCGACA 57.184 29.630 0.00 0.00 36.78 4.35
611 612 9.855361 CTCATGATATAAGAACATTTTCGACAC 57.145 33.333 0.00 0.00 36.78 3.67
612 613 9.599866 TCATGATATAAGAACATTTTCGACACT 57.400 29.630 0.00 0.00 36.78 3.55
629 630 8.563123 TTCGACACTAGTATATTATGAGAGGG 57.437 38.462 0.00 0.00 0.00 4.30
630 631 7.914859 TCGACACTAGTATATTATGAGAGGGA 58.085 38.462 0.00 0.00 0.00 4.20
631 632 8.041919 TCGACACTAGTATATTATGAGAGGGAG 58.958 40.741 0.00 0.00 0.00 4.30
632 633 7.281324 CGACACTAGTATATTATGAGAGGGAGG 59.719 44.444 0.00 0.00 0.00 4.30
633 634 7.415086 ACACTAGTATATTATGAGAGGGAGGG 58.585 42.308 0.00 0.00 0.00 4.30
634 635 7.242101 ACACTAGTATATTATGAGAGGGAGGGA 59.758 40.741 0.00 0.00 0.00 4.20
635 636 7.777910 CACTAGTATATTATGAGAGGGAGGGAG 59.222 44.444 0.00 0.00 0.00 4.30
636 637 6.744802 AGTATATTATGAGAGGGAGGGAGT 57.255 41.667 0.00 0.00 0.00 3.85
741 744 1.596895 GGAGAGAGAAGCGAACGGGT 61.597 60.000 0.00 0.00 0.00 5.28
941 944 2.547642 CGCCAAATCAAGCCTTCCAAAA 60.548 45.455 0.00 0.00 0.00 2.44
944 947 4.520111 GCCAAATCAAGCCTTCCAAAATTT 59.480 37.500 0.00 0.00 0.00 1.82
2952 3215 5.010617 GGCATTGAAGTGTTTAAGGGAGAAA 59.989 40.000 0.00 0.00 0.00 2.52
3457 3793 3.511934 GTCCTAGACTCCTTTGCTGAGAA 59.488 47.826 0.00 0.00 33.95 2.87
3473 3809 8.510243 TTGCTGAGAAGCTCATGATAAAAATA 57.490 30.769 0.00 0.00 39.92 1.40
3894 4230 2.949909 TACTTGCGACGCCCCACAT 61.950 57.895 18.69 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.722629 CACACGAACGTAGACGAACAAT 59.277 45.455 9.41 0.00 43.02 2.71
13 14 2.406368 CGAAAACACACGAACGTAGACG 60.406 50.000 0.00 0.00 46.33 4.18
23 24 0.948678 ATCCAACCCGAAAACACACG 59.051 50.000 0.00 0.00 0.00 4.49
30 31 3.780804 TCAGAAAGATCCAACCCGAAA 57.219 42.857 0.00 0.00 0.00 3.46
45 46 9.486497 GCAGATGAAGAATAACATAGATCAGAA 57.514 33.333 0.00 0.00 0.00 3.02
46 47 7.811713 CGCAGATGAAGAATAACATAGATCAGA 59.188 37.037 0.00 0.00 0.00 3.27
47 48 7.063191 CCGCAGATGAAGAATAACATAGATCAG 59.937 40.741 0.00 0.00 0.00 2.90
48 49 6.870439 CCGCAGATGAAGAATAACATAGATCA 59.130 38.462 0.00 0.00 0.00 2.92
49 50 6.183360 GCCGCAGATGAAGAATAACATAGATC 60.183 42.308 0.00 0.00 0.00 2.75
50 51 5.641209 GCCGCAGATGAAGAATAACATAGAT 59.359 40.000 0.00 0.00 0.00 1.98
51 52 4.991056 GCCGCAGATGAAGAATAACATAGA 59.009 41.667 0.00 0.00 0.00 1.98
52 53 4.143242 CGCCGCAGATGAAGAATAACATAG 60.143 45.833 0.00 0.00 0.00 2.23
53 54 3.740832 CGCCGCAGATGAAGAATAACATA 59.259 43.478 0.00 0.00 0.00 2.29
54 55 2.545526 CGCCGCAGATGAAGAATAACAT 59.454 45.455 0.00 0.00 0.00 2.71
55 56 1.933181 CGCCGCAGATGAAGAATAACA 59.067 47.619 0.00 0.00 0.00 2.41
56 57 1.261619 CCGCCGCAGATGAAGAATAAC 59.738 52.381 0.00 0.00 0.00 1.89
57 58 1.134521 ACCGCCGCAGATGAAGAATAA 60.135 47.619 0.00 0.00 0.00 1.40
58 59 0.464036 ACCGCCGCAGATGAAGAATA 59.536 50.000 0.00 0.00 0.00 1.75
59 60 0.392998 AACCGCCGCAGATGAAGAAT 60.393 50.000 0.00 0.00 0.00 2.40
60 61 1.003839 AACCGCCGCAGATGAAGAA 60.004 52.632 0.00 0.00 0.00 2.52
61 62 1.741401 CAACCGCCGCAGATGAAGA 60.741 57.895 0.00 0.00 0.00 2.87
62 63 1.577328 AACAACCGCCGCAGATGAAG 61.577 55.000 0.00 0.00 0.00 3.02
63 64 1.599518 AACAACCGCCGCAGATGAA 60.600 52.632 0.00 0.00 0.00 2.57
64 65 2.031919 AACAACCGCCGCAGATGA 59.968 55.556 0.00 0.00 0.00 2.92
65 66 2.176546 CAACAACCGCCGCAGATG 59.823 61.111 0.00 0.00 0.00 2.90
66 67 3.055719 CCAACAACCGCCGCAGAT 61.056 61.111 0.00 0.00 0.00 2.90
67 68 4.555709 ACCAACAACCGCCGCAGA 62.556 61.111 0.00 0.00 0.00 4.26
68 69 4.326766 CACCAACAACCGCCGCAG 62.327 66.667 0.00 0.00 0.00 5.18
73 74 4.980903 CAGCGCACCAACAACCGC 62.981 66.667 11.47 0.00 46.14 5.68
74 75 4.326766 CCAGCGCACCAACAACCG 62.327 66.667 11.47 0.00 0.00 4.44
75 76 3.194272 GACCAGCGCACCAACAACC 62.194 63.158 11.47 0.00 0.00 3.77
76 77 2.331451 GACCAGCGCACCAACAAC 59.669 61.111 11.47 0.00 0.00 3.32
77 78 2.046009 TAGGACCAGCGCACCAACAA 62.046 55.000 11.47 0.00 0.00 2.83
78 79 1.836999 ATAGGACCAGCGCACCAACA 61.837 55.000 11.47 0.00 0.00 3.33
79 80 0.177141 TATAGGACCAGCGCACCAAC 59.823 55.000 11.47 0.00 0.00 3.77
80 81 0.906066 TTATAGGACCAGCGCACCAA 59.094 50.000 11.47 0.00 0.00 3.67
81 82 0.464036 CTTATAGGACCAGCGCACCA 59.536 55.000 11.47 0.00 0.00 4.17
82 83 0.249911 CCTTATAGGACCAGCGCACC 60.250 60.000 11.47 7.54 37.67 5.01
83 84 0.880718 GCCTTATAGGACCAGCGCAC 60.881 60.000 11.47 0.00 37.67 5.34
84 85 1.445942 GCCTTATAGGACCAGCGCA 59.554 57.895 11.47 0.00 37.67 6.09
85 86 1.301795 GGCCTTATAGGACCAGCGC 60.302 63.158 0.00 0.00 37.46 5.92
91 92 2.626743 TCGTGCTAAGGCCTTATAGGAC 59.373 50.000 25.37 24.18 46.64 3.85
92 93 2.626743 GTCGTGCTAAGGCCTTATAGGA 59.373 50.000 25.37 22.06 37.67 2.94
93 94 2.607282 CGTCGTGCTAAGGCCTTATAGG 60.607 54.545 25.37 20.41 38.80 2.57
94 95 2.292569 TCGTCGTGCTAAGGCCTTATAG 59.707 50.000 25.37 17.62 37.74 1.31
95 96 2.033801 GTCGTCGTGCTAAGGCCTTATA 59.966 50.000 25.37 14.69 37.74 0.98
96 97 1.108776 TCGTCGTGCTAAGGCCTTAT 58.891 50.000 25.37 3.52 37.74 1.73
97 98 0.171903 GTCGTCGTGCTAAGGCCTTA 59.828 55.000 23.79 23.79 37.74 2.69
98 99 1.080025 GTCGTCGTGCTAAGGCCTT 60.080 57.895 24.18 24.18 37.74 4.35
99 100 1.533469 AAGTCGTCGTGCTAAGGCCT 61.533 55.000 0.00 0.00 37.74 5.19
100 101 1.077089 GAAGTCGTCGTGCTAAGGCC 61.077 60.000 0.00 0.00 37.74 5.19
101 102 1.077089 GGAAGTCGTCGTGCTAAGGC 61.077 60.000 0.00 0.00 39.26 4.35
102 103 0.458025 GGGAAGTCGTCGTGCTAAGG 60.458 60.000 0.00 0.00 0.00 2.69
103 104 0.797249 CGGGAAGTCGTCGTGCTAAG 60.797 60.000 0.00 0.00 0.00 2.18
104 105 1.210931 CGGGAAGTCGTCGTGCTAA 59.789 57.895 0.00 0.00 0.00 3.09
105 106 1.672030 TCGGGAAGTCGTCGTGCTA 60.672 57.895 0.00 0.00 0.00 3.49
106 107 2.981909 TCGGGAAGTCGTCGTGCT 60.982 61.111 0.00 0.00 0.00 4.40
107 108 2.804090 GTCGGGAAGTCGTCGTGC 60.804 66.667 0.00 0.00 0.00 5.34
108 109 1.442184 CAGTCGGGAAGTCGTCGTG 60.442 63.158 0.00 0.00 0.00 4.35
109 110 1.450531 AACAGTCGGGAAGTCGTCGT 61.451 55.000 0.00 0.00 0.00 4.34
110 111 0.318445 AAACAGTCGGGAAGTCGTCG 60.318 55.000 0.00 0.00 0.00 5.12
111 112 2.030451 AGTAAACAGTCGGGAAGTCGTC 60.030 50.000 0.00 0.00 0.00 4.20
112 113 1.959282 AGTAAACAGTCGGGAAGTCGT 59.041 47.619 0.00 0.00 0.00 4.34
113 114 2.719426 AGTAAACAGTCGGGAAGTCG 57.281 50.000 0.00 0.00 0.00 4.18
114 115 4.510038 TGTAGTAAACAGTCGGGAAGTC 57.490 45.455 0.00 0.00 33.01 3.01
115 116 4.099881 TGTTGTAGTAAACAGTCGGGAAGT 59.900 41.667 0.00 0.00 39.87 3.01
116 117 4.624015 TGTTGTAGTAAACAGTCGGGAAG 58.376 43.478 0.00 0.00 39.87 3.46
117 118 4.669206 TGTTGTAGTAAACAGTCGGGAA 57.331 40.909 0.00 0.00 39.87 3.97
118 119 4.099881 ACTTGTTGTAGTAAACAGTCGGGA 59.900 41.667 0.00 0.00 40.93 5.14
119 120 4.374399 ACTTGTTGTAGTAAACAGTCGGG 58.626 43.478 0.00 0.00 40.93 5.14
120 121 5.292589 ACAACTTGTTGTAGTAAACAGTCGG 59.707 40.000 16.35 0.00 40.93 4.79
121 122 6.182634 CACAACTTGTTGTAGTAAACAGTCG 58.817 40.000 17.26 0.00 40.93 4.18
122 123 5.963586 GCACAACTTGTTGTAGTAAACAGTC 59.036 40.000 17.26 0.00 40.93 3.51
123 124 5.163693 GGCACAACTTGTTGTAGTAAACAGT 60.164 40.000 17.26 0.00 40.93 3.55
124 125 5.270853 GGCACAACTTGTTGTAGTAAACAG 58.729 41.667 17.26 5.63 40.93 3.16
125 126 4.096682 GGGCACAACTTGTTGTAGTAAACA 59.903 41.667 17.26 0.00 38.26 2.83
126 127 4.603985 GGGCACAACTTGTTGTAGTAAAC 58.396 43.478 17.26 6.04 33.17 2.01
127 128 3.312973 CGGGCACAACTTGTTGTAGTAAA 59.687 43.478 17.26 0.00 33.17 2.01
128 129 2.873472 CGGGCACAACTTGTTGTAGTAA 59.127 45.455 17.26 0.00 33.17 2.24
129 130 2.102757 TCGGGCACAACTTGTTGTAGTA 59.897 45.455 17.26 1.74 33.17 1.82
130 131 1.134340 TCGGGCACAACTTGTTGTAGT 60.134 47.619 17.26 0.00 33.17 2.73
131 132 1.263217 GTCGGGCACAACTTGTTGTAG 59.737 52.381 17.26 12.96 33.17 2.74
132 133 1.134340 AGTCGGGCACAACTTGTTGTA 60.134 47.619 17.26 1.01 33.17 2.41
133 134 0.393808 AGTCGGGCACAACTTGTTGT 60.394 50.000 12.73 12.73 35.14 3.32
134 135 0.307760 GAGTCGGGCACAACTTGTTG 59.692 55.000 11.44 11.44 0.00 3.33
135 136 0.818040 GGAGTCGGGCACAACTTGTT 60.818 55.000 0.00 0.00 0.00 2.83
136 137 1.227853 GGAGTCGGGCACAACTTGT 60.228 57.895 0.00 0.00 0.00 3.16
137 138 2.317609 CGGAGTCGGGCACAACTTG 61.318 63.158 0.00 0.00 0.00 3.16
138 139 2.030562 CGGAGTCGGGCACAACTT 59.969 61.111 0.00 0.00 0.00 2.66
155 156 4.530857 CATCACCCCTCCGTCGCC 62.531 72.222 0.00 0.00 0.00 5.54
156 157 2.797278 ATCATCACCCCTCCGTCGC 61.797 63.158 0.00 0.00 0.00 5.19
157 158 1.068083 CATCATCACCCCTCCGTCG 59.932 63.158 0.00 0.00 0.00 5.12
158 159 1.447643 CCATCATCACCCCTCCGTC 59.552 63.158 0.00 0.00 0.00 4.79
159 160 2.746375 GCCATCATCACCCCTCCGT 61.746 63.158 0.00 0.00 0.00 4.69
160 161 2.111878 GCCATCATCACCCCTCCG 59.888 66.667 0.00 0.00 0.00 4.63
161 162 0.753111 GTTGCCATCATCACCCCTCC 60.753 60.000 0.00 0.00 0.00 4.30
162 163 1.097547 CGTTGCCATCATCACCCCTC 61.098 60.000 0.00 0.00 0.00 4.30
163 164 1.077501 CGTTGCCATCATCACCCCT 60.078 57.895 0.00 0.00 0.00 4.79
164 165 2.774799 GCGTTGCCATCATCACCCC 61.775 63.158 0.00 0.00 0.00 4.95
165 166 2.045708 TGCGTTGCCATCATCACCC 61.046 57.895 0.00 0.00 0.00 4.61
166 167 1.137404 GTGCGTTGCCATCATCACC 59.863 57.895 0.00 0.00 0.00 4.02
167 168 1.137404 GGTGCGTTGCCATCATCAC 59.863 57.895 0.00 0.00 0.00 3.06
168 169 0.608856 AAGGTGCGTTGCCATCATCA 60.609 50.000 0.00 0.00 0.00 3.07
169 170 0.099436 GAAGGTGCGTTGCCATCATC 59.901 55.000 0.00 0.00 0.00 2.92
170 171 1.647545 CGAAGGTGCGTTGCCATCAT 61.648 55.000 0.00 0.00 0.00 2.45
171 172 2.324330 CGAAGGTGCGTTGCCATCA 61.324 57.895 0.00 0.00 0.00 3.07
172 173 2.480555 CGAAGGTGCGTTGCCATC 59.519 61.111 0.00 0.00 0.00 3.51
185 186 2.734673 GCACTGAAGCGAGCCGAAG 61.735 63.158 0.00 0.00 0.00 3.79
186 187 2.715532 AAGCACTGAAGCGAGCCGAA 62.716 55.000 0.00 0.00 40.15 4.30
187 188 3.226429 AAGCACTGAAGCGAGCCGA 62.226 57.895 0.00 0.00 40.15 5.54
188 189 2.740055 AAGCACTGAAGCGAGCCG 60.740 61.111 0.00 0.00 40.15 5.52
189 190 0.670546 TACAAGCACTGAAGCGAGCC 60.671 55.000 0.00 0.00 40.15 4.70
190 191 0.718343 CTACAAGCACTGAAGCGAGC 59.282 55.000 0.00 0.00 40.15 5.03
191 192 1.989165 GACTACAAGCACTGAAGCGAG 59.011 52.381 0.00 0.00 40.15 5.03
192 193 1.666023 CGACTACAAGCACTGAAGCGA 60.666 52.381 0.00 0.00 40.15 4.93
193 194 0.710567 CGACTACAAGCACTGAAGCG 59.289 55.000 0.00 0.00 40.15 4.68
194 195 1.784525 ACGACTACAAGCACTGAAGC 58.215 50.000 0.00 0.00 0.00 3.86
195 196 2.096713 GCAACGACTACAAGCACTGAAG 60.097 50.000 0.00 0.00 0.00 3.02
196 197 1.864711 GCAACGACTACAAGCACTGAA 59.135 47.619 0.00 0.00 0.00 3.02
197 198 1.068588 AGCAACGACTACAAGCACTGA 59.931 47.619 0.00 0.00 0.00 3.41
198 199 1.502231 AGCAACGACTACAAGCACTG 58.498 50.000 0.00 0.00 0.00 3.66
199 200 2.557056 TCTAGCAACGACTACAAGCACT 59.443 45.455 0.00 0.00 0.00 4.40
200 201 2.662156 GTCTAGCAACGACTACAAGCAC 59.338 50.000 0.00 0.00 0.00 4.40
201 202 2.667448 CGTCTAGCAACGACTACAAGCA 60.667 50.000 0.00 0.00 45.37 3.91
202 203 1.912110 CGTCTAGCAACGACTACAAGC 59.088 52.381 0.00 0.00 45.37 4.01
203 204 2.095364 ACCGTCTAGCAACGACTACAAG 60.095 50.000 5.60 0.00 45.37 3.16
204 205 1.881973 ACCGTCTAGCAACGACTACAA 59.118 47.619 5.60 0.00 45.37 2.41
205 206 1.466167 GACCGTCTAGCAACGACTACA 59.534 52.381 5.60 0.00 45.37 2.74
206 207 1.736681 AGACCGTCTAGCAACGACTAC 59.263 52.381 0.00 0.00 45.37 2.73
207 208 2.105006 AGACCGTCTAGCAACGACTA 57.895 50.000 0.00 0.00 45.37 2.59
208 209 1.736681 GTAGACCGTCTAGCAACGACT 59.263 52.381 8.59 7.06 45.37 4.18
209 210 1.528603 CGTAGACCGTCTAGCAACGAC 60.529 57.143 13.88 1.43 45.37 4.34
210 211 0.723414 CGTAGACCGTCTAGCAACGA 59.277 55.000 13.88 0.00 45.37 3.85
211 212 0.247974 CCGTAGACCGTCTAGCAACG 60.248 60.000 8.59 10.93 42.24 4.10
212 213 0.100146 CCCGTAGACCGTCTAGCAAC 59.900 60.000 8.59 0.00 33.66 4.17
213 214 1.660560 GCCCGTAGACCGTCTAGCAA 61.661 60.000 8.59 0.00 33.66 3.91
214 215 2.117156 GCCCGTAGACCGTCTAGCA 61.117 63.158 8.59 0.00 33.66 3.49
215 216 2.720605 GCCCGTAGACCGTCTAGC 59.279 66.667 8.59 5.62 33.66 3.42
216 217 1.153005 AGGCCCGTAGACCGTCTAG 60.153 63.158 8.59 3.78 33.66 2.43
217 218 1.452651 CAGGCCCGTAGACCGTCTA 60.453 63.158 4.01 4.01 33.66 2.59
218 219 2.754658 CAGGCCCGTAGACCGTCT 60.755 66.667 6.25 6.25 33.66 4.18
219 220 2.753043 TCAGGCCCGTAGACCGTC 60.753 66.667 0.00 0.00 33.66 4.79
220 221 3.066814 GTCAGGCCCGTAGACCGT 61.067 66.667 0.00 0.00 33.66 4.83
221 222 2.754658 AGTCAGGCCCGTAGACCG 60.755 66.667 0.00 0.00 32.82 4.79
222 223 0.682209 TACAGTCAGGCCCGTAGACC 60.682 60.000 0.00 0.00 32.82 3.85
223 224 1.180029 TTACAGTCAGGCCCGTAGAC 58.820 55.000 0.00 2.78 0.00 2.59
224 225 2.154567 ATTACAGTCAGGCCCGTAGA 57.845 50.000 0.00 0.00 0.00 2.59
225 226 2.981859 AATTACAGTCAGGCCCGTAG 57.018 50.000 0.00 0.00 0.00 3.51
226 227 3.706600 AAAATTACAGTCAGGCCCGTA 57.293 42.857 0.00 0.00 0.00 4.02
227 228 2.579410 AAAATTACAGTCAGGCCCGT 57.421 45.000 0.00 0.00 0.00 5.28
228 229 5.576447 AATAAAAATTACAGTCAGGCCCG 57.424 39.130 0.00 0.00 0.00 6.13
229 230 9.529325 GAAATAATAAAAATTACAGTCAGGCCC 57.471 33.333 0.00 0.00 0.00 5.80
249 250 9.688091 TGGCAGTACAATAAATACCAGAAATAA 57.312 29.630 0.00 0.00 0.00 1.40
250 251 9.860650 ATGGCAGTACAATAAATACCAGAAATA 57.139 29.630 0.00 0.00 0.00 1.40
251 252 8.632679 CATGGCAGTACAATAAATACCAGAAAT 58.367 33.333 0.00 0.00 0.00 2.17
252 253 7.831690 TCATGGCAGTACAATAAATACCAGAAA 59.168 33.333 0.00 0.00 0.00 2.52
253 254 7.342581 TCATGGCAGTACAATAAATACCAGAA 58.657 34.615 0.00 0.00 0.00 3.02
254 255 6.894682 TCATGGCAGTACAATAAATACCAGA 58.105 36.000 0.00 0.00 0.00 3.86
255 256 7.750229 ATCATGGCAGTACAATAAATACCAG 57.250 36.000 0.00 0.00 0.00 4.00
256 257 7.777440 TCAATCATGGCAGTACAATAAATACCA 59.223 33.333 0.00 0.00 0.00 3.25
257 258 8.165239 TCAATCATGGCAGTACAATAAATACC 57.835 34.615 0.00 0.00 0.00 2.73
261 262 9.368674 CATTTTCAATCATGGCAGTACAATAAA 57.631 29.630 0.00 0.00 0.00 1.40
262 263 8.747471 TCATTTTCAATCATGGCAGTACAATAA 58.253 29.630 0.00 0.00 0.00 1.40
263 264 8.291191 TCATTTTCAATCATGGCAGTACAATA 57.709 30.769 0.00 0.00 0.00 1.90
264 265 7.172868 TCATTTTCAATCATGGCAGTACAAT 57.827 32.000 0.00 0.00 0.00 2.71
265 266 6.587206 TCATTTTCAATCATGGCAGTACAA 57.413 33.333 0.00 0.00 0.00 2.41
266 267 6.587206 TTCATTTTCAATCATGGCAGTACA 57.413 33.333 0.00 0.00 0.00 2.90
267 268 7.864379 CCTATTCATTTTCAATCATGGCAGTAC 59.136 37.037 0.00 0.00 0.00 2.73
268 269 7.560991 ACCTATTCATTTTCAATCATGGCAGTA 59.439 33.333 0.00 0.00 0.00 2.74
269 270 6.381994 ACCTATTCATTTTCAATCATGGCAGT 59.618 34.615 0.00 0.00 0.00 4.40
270 271 6.812998 ACCTATTCATTTTCAATCATGGCAG 58.187 36.000 0.00 0.00 0.00 4.85
271 272 6.459985 CGACCTATTCATTTTCAATCATGGCA 60.460 38.462 0.00 0.00 0.00 4.92
272 273 5.916883 CGACCTATTCATTTTCAATCATGGC 59.083 40.000 0.00 0.00 0.00 4.40
273 274 7.263100 TCGACCTATTCATTTTCAATCATGG 57.737 36.000 0.00 0.00 0.00 3.66
274 275 9.740239 ATTTCGACCTATTCATTTTCAATCATG 57.260 29.630 0.00 0.00 0.00 3.07
312 313 8.387354 CGGTTCATTTTTCTTTTGCTTTACTTT 58.613 29.630 0.00 0.00 0.00 2.66
313 314 7.762159 TCGGTTCATTTTTCTTTTGCTTTACTT 59.238 29.630 0.00 0.00 0.00 2.24
314 315 7.262048 TCGGTTCATTTTTCTTTTGCTTTACT 58.738 30.769 0.00 0.00 0.00 2.24
315 316 7.434013 TCTCGGTTCATTTTTCTTTTGCTTTAC 59.566 33.333 0.00 0.00 0.00 2.01
316 317 7.484975 TCTCGGTTCATTTTTCTTTTGCTTTA 58.515 30.769 0.00 0.00 0.00 1.85
317 318 6.337356 TCTCGGTTCATTTTTCTTTTGCTTT 58.663 32.000 0.00 0.00 0.00 3.51
318 319 5.901552 TCTCGGTTCATTTTTCTTTTGCTT 58.098 33.333 0.00 0.00 0.00 3.91
319 320 5.514274 TCTCGGTTCATTTTTCTTTTGCT 57.486 34.783 0.00 0.00 0.00 3.91
320 321 6.582437 TTTCTCGGTTCATTTTTCTTTTGC 57.418 33.333 0.00 0.00 0.00 3.68
327 328 9.981114 ACTCAATATTTTTCTCGGTTCATTTTT 57.019 25.926 0.00 0.00 0.00 1.94
328 329 9.981114 AACTCAATATTTTTCTCGGTTCATTTT 57.019 25.926 0.00 0.00 0.00 1.82
329 330 9.981114 AAACTCAATATTTTTCTCGGTTCATTT 57.019 25.926 0.00 0.00 0.00 2.32
330 331 9.981114 AAAACTCAATATTTTTCTCGGTTCATT 57.019 25.926 0.00 0.00 0.00 2.57
331 332 9.410556 CAAAACTCAATATTTTTCTCGGTTCAT 57.589 29.630 0.00 0.00 0.00 2.57
332 333 7.865385 CCAAAACTCAATATTTTTCTCGGTTCA 59.135 33.333 0.00 0.00 0.00 3.18
333 334 8.079809 TCCAAAACTCAATATTTTTCTCGGTTC 58.920 33.333 0.00 0.00 0.00 3.62
334 335 7.947282 TCCAAAACTCAATATTTTTCTCGGTT 58.053 30.769 0.00 0.00 0.00 4.44
335 336 7.519032 TCCAAAACTCAATATTTTTCTCGGT 57.481 32.000 0.00 0.00 0.00 4.69
336 337 6.528072 GCTCCAAAACTCAATATTTTTCTCGG 59.472 38.462 0.00 0.00 0.00 4.63
337 338 7.061094 GTGCTCCAAAACTCAATATTTTTCTCG 59.939 37.037 0.00 0.00 0.00 4.04
338 339 7.329471 GGTGCTCCAAAACTCAATATTTTTCTC 59.671 37.037 0.00 0.00 0.00 2.87
339 340 7.154656 GGTGCTCCAAAACTCAATATTTTTCT 58.845 34.615 0.00 0.00 0.00 2.52
340 341 6.928492 TGGTGCTCCAAAACTCAATATTTTTC 59.072 34.615 4.68 0.00 41.25 2.29
341 342 6.825610 TGGTGCTCCAAAACTCAATATTTTT 58.174 32.000 4.68 0.00 41.25 1.94
342 343 6.418057 TGGTGCTCCAAAACTCAATATTTT 57.582 33.333 4.68 0.00 41.25 1.82
368 369 3.303526 GGCTAAACTCGAGCGTTGAAAAA 60.304 43.478 13.61 0.00 41.06 1.94
369 370 2.222445 GGCTAAACTCGAGCGTTGAAAA 59.778 45.455 13.61 0.00 41.06 2.29
370 371 1.796459 GGCTAAACTCGAGCGTTGAAA 59.204 47.619 13.61 0.00 41.06 2.69
371 372 1.000506 AGGCTAAACTCGAGCGTTGAA 59.999 47.619 13.61 0.00 41.06 2.69
372 373 0.601558 AGGCTAAACTCGAGCGTTGA 59.398 50.000 13.61 0.00 41.06 3.18
373 374 0.716108 CAGGCTAAACTCGAGCGTTG 59.284 55.000 13.61 2.61 41.06 4.10
374 375 0.317479 ACAGGCTAAACTCGAGCGTT 59.683 50.000 13.61 9.77 41.06 4.84
375 376 0.317479 AACAGGCTAAACTCGAGCGT 59.683 50.000 13.61 2.62 41.06 5.07
376 377 1.429463 AAACAGGCTAAACTCGAGCG 58.571 50.000 13.61 0.00 41.06 5.03
377 378 2.806244 TGAAAACAGGCTAAACTCGAGC 59.194 45.455 13.61 0.00 39.33 5.03
378 379 5.409826 AGAATGAAAACAGGCTAAACTCGAG 59.590 40.000 11.84 11.84 0.00 4.04
379 380 5.305585 AGAATGAAAACAGGCTAAACTCGA 58.694 37.500 0.00 0.00 0.00 4.04
380 381 5.409826 AGAGAATGAAAACAGGCTAAACTCG 59.590 40.000 0.00 0.00 0.00 4.18
381 382 6.809630 AGAGAATGAAAACAGGCTAAACTC 57.190 37.500 0.00 0.00 0.00 3.01
382 383 7.939588 ACTTAGAGAATGAAAACAGGCTAAACT 59.060 33.333 0.00 0.00 0.00 2.66
383 384 8.100508 ACTTAGAGAATGAAAACAGGCTAAAC 57.899 34.615 0.00 0.00 0.00 2.01
384 385 8.691661 AACTTAGAGAATGAAAACAGGCTAAA 57.308 30.769 0.00 0.00 0.00 1.85
385 386 8.691661 AAACTTAGAGAATGAAAACAGGCTAA 57.308 30.769 0.00 0.00 0.00 3.09
386 387 8.691661 AAAACTTAGAGAATGAAAACAGGCTA 57.308 30.769 0.00 0.00 0.00 3.93
387 388 7.588497 AAAACTTAGAGAATGAAAACAGGCT 57.412 32.000 0.00 0.00 0.00 4.58
388 389 9.181805 GTAAAAACTTAGAGAATGAAAACAGGC 57.818 33.333 0.00 0.00 0.00 4.85
396 397 9.778741 ACTGATGTGTAAAAACTTAGAGAATGA 57.221 29.630 0.00 0.00 0.00 2.57
399 400 8.761497 CGAACTGATGTGTAAAAACTTAGAGAA 58.239 33.333 0.00 0.00 0.00 2.87
400 401 7.384115 CCGAACTGATGTGTAAAAACTTAGAGA 59.616 37.037 0.00 0.00 0.00 3.10
401 402 7.510630 CCGAACTGATGTGTAAAAACTTAGAG 58.489 38.462 0.00 0.00 0.00 2.43
402 403 6.073440 GCCGAACTGATGTGTAAAAACTTAGA 60.073 38.462 0.00 0.00 0.00 2.10
403 404 6.073222 AGCCGAACTGATGTGTAAAAACTTAG 60.073 38.462 0.00 0.00 0.00 2.18
404 405 5.761234 AGCCGAACTGATGTGTAAAAACTTA 59.239 36.000 0.00 0.00 0.00 2.24
405 406 4.578928 AGCCGAACTGATGTGTAAAAACTT 59.421 37.500 0.00 0.00 0.00 2.66
406 407 4.134563 AGCCGAACTGATGTGTAAAAACT 58.865 39.130 0.00 0.00 0.00 2.66
407 408 4.483476 AGCCGAACTGATGTGTAAAAAC 57.517 40.909 0.00 0.00 0.00 2.43
408 409 5.508200 AAAGCCGAACTGATGTGTAAAAA 57.492 34.783 0.00 0.00 0.00 1.94
409 410 5.992829 TCTAAAGCCGAACTGATGTGTAAAA 59.007 36.000 0.00 0.00 0.00 1.52
410 411 5.543714 TCTAAAGCCGAACTGATGTGTAAA 58.456 37.500 0.00 0.00 0.00 2.01
411 412 5.142061 TCTAAAGCCGAACTGATGTGTAA 57.858 39.130 0.00 0.00 0.00 2.41
412 413 4.794278 TCTAAAGCCGAACTGATGTGTA 57.206 40.909 0.00 0.00 0.00 2.90
413 414 3.678056 TCTAAAGCCGAACTGATGTGT 57.322 42.857 0.00 0.00 0.00 3.72
414 415 3.557595 GGATCTAAAGCCGAACTGATGTG 59.442 47.826 0.00 0.00 0.00 3.21
415 416 3.197766 TGGATCTAAAGCCGAACTGATGT 59.802 43.478 0.00 0.00 31.80 3.06
416 417 3.797039 TGGATCTAAAGCCGAACTGATG 58.203 45.455 0.00 0.00 31.80 3.07
417 418 4.192317 GTTGGATCTAAAGCCGAACTGAT 58.808 43.478 0.00 0.00 31.80 2.90
418 419 3.596214 GTTGGATCTAAAGCCGAACTGA 58.404 45.455 0.00 0.00 31.80 3.41
419 420 2.348666 CGTTGGATCTAAAGCCGAACTG 59.651 50.000 0.00 0.00 31.80 3.16
420 421 2.028385 ACGTTGGATCTAAAGCCGAACT 60.028 45.455 4.70 0.00 31.80 3.01
421 422 2.344025 ACGTTGGATCTAAAGCCGAAC 58.656 47.619 4.70 0.00 31.80 3.95
422 423 2.613691 GACGTTGGATCTAAAGCCGAA 58.386 47.619 4.70 0.00 31.80 4.30
423 424 1.134907 GGACGTTGGATCTAAAGCCGA 60.135 52.381 4.70 0.00 31.80 5.54
424 425 1.287425 GGACGTTGGATCTAAAGCCG 58.713 55.000 4.70 2.11 31.80 5.52
425 426 2.007608 GTGGACGTTGGATCTAAAGCC 58.992 52.381 4.70 7.68 0.00 4.35
426 427 2.930682 GAGTGGACGTTGGATCTAAAGC 59.069 50.000 4.70 0.00 0.00 3.51
427 428 3.056107 TGGAGTGGACGTTGGATCTAAAG 60.056 47.826 3.28 3.28 0.00 1.85
428 429 2.901192 TGGAGTGGACGTTGGATCTAAA 59.099 45.455 0.00 0.00 0.00 1.85
429 430 2.531771 TGGAGTGGACGTTGGATCTAA 58.468 47.619 0.00 0.00 0.00 2.10
430 431 2.225382 TGGAGTGGACGTTGGATCTA 57.775 50.000 0.00 0.00 0.00 1.98
431 432 1.002087 GTTGGAGTGGACGTTGGATCT 59.998 52.381 0.00 0.00 0.00 2.75
432 433 1.270625 TGTTGGAGTGGACGTTGGATC 60.271 52.381 0.00 0.00 0.00 3.36
433 434 0.762418 TGTTGGAGTGGACGTTGGAT 59.238 50.000 0.00 0.00 0.00 3.41
434 435 0.542333 TTGTTGGAGTGGACGTTGGA 59.458 50.000 0.00 0.00 0.00 3.53
435 436 1.266718 CATTGTTGGAGTGGACGTTGG 59.733 52.381 0.00 0.00 0.00 3.77
436 437 1.334960 GCATTGTTGGAGTGGACGTTG 60.335 52.381 0.00 0.00 0.00 4.10
437 438 0.951558 GCATTGTTGGAGTGGACGTT 59.048 50.000 0.00 0.00 0.00 3.99
438 439 0.179032 TGCATTGTTGGAGTGGACGT 60.179 50.000 0.00 0.00 0.00 4.34
439 440 0.950836 TTGCATTGTTGGAGTGGACG 59.049 50.000 0.00 0.00 0.00 4.79
440 441 2.414559 CGATTGCATTGTTGGAGTGGAC 60.415 50.000 0.00 0.00 0.00 4.02
441 442 1.811965 CGATTGCATTGTTGGAGTGGA 59.188 47.619 0.00 0.00 0.00 4.02
442 443 1.811965 TCGATTGCATTGTTGGAGTGG 59.188 47.619 0.00 0.00 0.00 4.00
443 444 3.236816 GTTCGATTGCATTGTTGGAGTG 58.763 45.455 0.00 0.00 0.00 3.51
444 445 2.884012 TGTTCGATTGCATTGTTGGAGT 59.116 40.909 0.00 0.00 0.00 3.85
445 446 3.557577 TGTTCGATTGCATTGTTGGAG 57.442 42.857 0.00 0.00 0.00 3.86
446 447 3.426025 CGATGTTCGATTGCATTGTTGGA 60.426 43.478 0.00 0.00 43.74 3.53
447 448 2.847717 CGATGTTCGATTGCATTGTTGG 59.152 45.455 0.00 0.00 43.74 3.77
448 449 2.277057 GCGATGTTCGATTGCATTGTTG 59.723 45.455 0.32 0.00 43.74 3.33
449 450 2.518949 GCGATGTTCGATTGCATTGTT 58.481 42.857 0.32 0.00 43.74 2.83
450 451 1.529622 CGCGATGTTCGATTGCATTGT 60.530 47.619 0.00 0.00 43.74 2.71
451 452 1.106933 CGCGATGTTCGATTGCATTG 58.893 50.000 0.00 0.00 43.74 2.82
452 453 0.589729 GCGCGATGTTCGATTGCATT 60.590 50.000 12.10 0.00 43.74 3.56
453 454 1.010797 GCGCGATGTTCGATTGCAT 60.011 52.632 12.10 0.00 43.74 3.96
454 455 2.399217 GCGCGATGTTCGATTGCA 59.601 55.556 12.10 0.00 43.74 4.08
455 456 2.351210 GGCGCGATGTTCGATTGC 60.351 61.111 12.10 1.40 43.74 3.56
456 457 0.587242 CTTGGCGCGATGTTCGATTG 60.587 55.000 12.10 0.00 43.74 2.67
457 458 1.705337 CCTTGGCGCGATGTTCGATT 61.705 55.000 12.10 0.00 43.74 3.34
458 459 2.173669 CCTTGGCGCGATGTTCGAT 61.174 57.895 12.10 0.00 43.74 3.59
459 460 2.813474 CCTTGGCGCGATGTTCGA 60.813 61.111 12.10 0.00 43.74 3.71
460 461 2.563086 GAACCTTGGCGCGATGTTCG 62.563 60.000 12.10 0.00 43.89 3.95
461 462 1.134694 GAACCTTGGCGCGATGTTC 59.865 57.895 12.10 15.74 0.00 3.18
462 463 2.677003 CGAACCTTGGCGCGATGTT 61.677 57.895 12.10 4.28 0.00 2.71
463 464 3.118454 CGAACCTTGGCGCGATGT 61.118 61.111 12.10 0.00 0.00 3.06
464 465 2.563086 GAACGAACCTTGGCGCGATG 62.563 60.000 12.10 0.00 0.00 3.84
465 466 2.358247 AACGAACCTTGGCGCGAT 60.358 55.556 12.10 0.00 0.00 4.58
466 467 2.144833 TAGAACGAACCTTGGCGCGA 62.145 55.000 12.10 0.00 0.00 5.87
467 468 1.735198 TAGAACGAACCTTGGCGCG 60.735 57.895 0.00 0.00 0.00 6.86
468 469 0.669625 AGTAGAACGAACCTTGGCGC 60.670 55.000 0.00 0.00 0.00 6.53
469 470 2.642139 TAGTAGAACGAACCTTGGCG 57.358 50.000 0.00 0.00 0.00 5.69
470 471 5.899299 TCTTATAGTAGAACGAACCTTGGC 58.101 41.667 0.00 0.00 0.00 4.52
471 472 7.652507 GGAATCTTATAGTAGAACGAACCTTGG 59.347 40.741 0.00 0.00 0.00 3.61
472 473 8.195436 TGGAATCTTATAGTAGAACGAACCTTG 58.805 37.037 0.00 0.00 0.00 3.61
473 474 8.302515 TGGAATCTTATAGTAGAACGAACCTT 57.697 34.615 0.00 0.00 0.00 3.50
474 475 7.893124 TGGAATCTTATAGTAGAACGAACCT 57.107 36.000 0.00 0.00 0.00 3.50
475 476 9.623350 GTATGGAATCTTATAGTAGAACGAACC 57.377 37.037 0.00 0.00 0.00 3.62
476 477 9.623350 GGTATGGAATCTTATAGTAGAACGAAC 57.377 37.037 0.00 0.00 0.00 3.95
477 478 8.509690 CGGTATGGAATCTTATAGTAGAACGAA 58.490 37.037 0.00 0.00 0.00 3.85
478 479 7.879677 TCGGTATGGAATCTTATAGTAGAACGA 59.120 37.037 0.00 0.00 0.00 3.85
479 480 8.037382 TCGGTATGGAATCTTATAGTAGAACG 57.963 38.462 0.00 0.00 0.00 3.95
482 483 9.803507 TCTTTCGGTATGGAATCTTATAGTAGA 57.196 33.333 0.00 0.00 0.00 2.59
485 486 9.930693 GAATCTTTCGGTATGGAATCTTATAGT 57.069 33.333 0.00 0.00 0.00 2.12
486 487 9.372369 GGAATCTTTCGGTATGGAATCTTATAG 57.628 37.037 0.00 0.00 0.00 1.31
487 488 9.101325 AGGAATCTTTCGGTATGGAATCTTATA 57.899 33.333 0.00 0.00 0.00 0.98
488 489 7.978925 AGGAATCTTTCGGTATGGAATCTTAT 58.021 34.615 0.00 0.00 0.00 1.73
489 490 7.374975 AGGAATCTTTCGGTATGGAATCTTA 57.625 36.000 0.00 0.00 0.00 2.10
490 491 6.253946 AGGAATCTTTCGGTATGGAATCTT 57.746 37.500 0.00 0.00 0.00 2.40
491 492 5.509840 CGAGGAATCTTTCGGTATGGAATCT 60.510 44.000 1.03 0.00 33.39 2.40
492 493 4.686554 CGAGGAATCTTTCGGTATGGAATC 59.313 45.833 1.03 0.00 33.39 2.52
493 494 4.101119 ACGAGGAATCTTTCGGTATGGAAT 59.899 41.667 11.05 0.00 40.93 3.01
494 495 3.449737 ACGAGGAATCTTTCGGTATGGAA 59.550 43.478 11.05 0.00 40.93 3.53
495 496 3.028850 ACGAGGAATCTTTCGGTATGGA 58.971 45.455 11.05 0.00 40.93 3.41
496 497 3.381949 GACGAGGAATCTTTCGGTATGG 58.618 50.000 11.05 0.00 40.93 2.74
497 498 3.043586 CGACGAGGAATCTTTCGGTATG 58.956 50.000 11.05 0.00 40.93 2.39
498 499 2.686915 ACGACGAGGAATCTTTCGGTAT 59.313 45.455 0.00 0.00 40.93 2.73
499 500 2.086869 ACGACGAGGAATCTTTCGGTA 58.913 47.619 0.00 0.00 40.93 4.02
500 501 0.886563 ACGACGAGGAATCTTTCGGT 59.113 50.000 0.00 0.41 40.93 4.69
501 502 1.269166 CACGACGAGGAATCTTTCGG 58.731 55.000 0.00 0.00 40.93 4.30
502 503 1.978542 ACACGACGAGGAATCTTTCG 58.021 50.000 0.00 6.25 42.26 3.46
503 504 3.057734 ACAACACGACGAGGAATCTTTC 58.942 45.455 0.00 0.00 0.00 2.62
504 505 3.107642 ACAACACGACGAGGAATCTTT 57.892 42.857 0.00 0.00 0.00 2.52
505 506 2.814280 ACAACACGACGAGGAATCTT 57.186 45.000 0.00 0.00 0.00 2.40
506 507 2.800544 CAAACAACACGACGAGGAATCT 59.199 45.455 0.00 0.00 0.00 2.40
507 508 2.798283 TCAAACAACACGACGAGGAATC 59.202 45.455 0.00 0.00 0.00 2.52
508 509 2.828877 TCAAACAACACGACGAGGAAT 58.171 42.857 0.00 0.00 0.00 3.01
509 510 2.296831 TCAAACAACACGACGAGGAA 57.703 45.000 0.00 0.00 0.00 3.36
510 511 2.131972 CATCAAACAACACGACGAGGA 58.868 47.619 0.00 0.00 0.00 3.71
511 512 1.194547 CCATCAAACAACACGACGAGG 59.805 52.381 0.00 0.00 0.00 4.63
512 513 1.398451 GCCATCAAACAACACGACGAG 60.398 52.381 0.00 0.00 0.00 4.18
513 514 0.584396 GCCATCAAACAACACGACGA 59.416 50.000 0.00 0.00 0.00 4.20
514 515 0.306228 TGCCATCAAACAACACGACG 59.694 50.000 0.00 0.00 0.00 5.12
515 516 2.704725 ATGCCATCAAACAACACGAC 57.295 45.000 0.00 0.00 0.00 4.34
516 517 2.620585 TCAATGCCATCAAACAACACGA 59.379 40.909 0.00 0.00 0.00 4.35
517 518 3.010624 TCAATGCCATCAAACAACACG 57.989 42.857 0.00 0.00 0.00 4.49
518 519 5.731599 TTTTCAATGCCATCAAACAACAC 57.268 34.783 0.00 0.00 0.00 3.32
519 520 5.177142 CGATTTTCAATGCCATCAAACAACA 59.823 36.000 0.00 0.00 0.00 3.33
520 521 5.177327 ACGATTTTCAATGCCATCAAACAAC 59.823 36.000 0.00 0.00 0.00 3.32
521 522 5.177142 CACGATTTTCAATGCCATCAAACAA 59.823 36.000 0.00 0.00 0.00 2.83
522 523 4.685165 CACGATTTTCAATGCCATCAAACA 59.315 37.500 0.00 0.00 0.00 2.83
523 524 4.685628 ACACGATTTTCAATGCCATCAAAC 59.314 37.500 0.00 0.00 0.00 2.93
524 525 4.880759 ACACGATTTTCAATGCCATCAAA 58.119 34.783 0.00 0.00 0.00 2.69
525 526 4.517952 ACACGATTTTCAATGCCATCAA 57.482 36.364 0.00 0.00 0.00 2.57
526 527 4.517952 AACACGATTTTCAATGCCATCA 57.482 36.364 0.00 0.00 0.00 3.07
527 528 5.879237 TCTAACACGATTTTCAATGCCATC 58.121 37.500 0.00 0.00 0.00 3.51
528 529 5.895636 TCTAACACGATTTTCAATGCCAT 57.104 34.783 0.00 0.00 0.00 4.40
529 530 5.697473 TTCTAACACGATTTTCAATGCCA 57.303 34.783 0.00 0.00 0.00 4.92
530 531 6.806249 TCATTTCTAACACGATTTTCAATGCC 59.194 34.615 0.00 0.00 0.00 4.40
531 532 7.795431 TCATTTCTAACACGATTTTCAATGC 57.205 32.000 0.00 0.00 0.00 3.56
532 533 8.357966 CGTTCATTTCTAACACGATTTTCAATG 58.642 33.333 0.00 0.00 32.51 2.82
533 534 7.537306 CCGTTCATTTCTAACACGATTTTCAAT 59.463 33.333 0.00 0.00 32.51 2.57
534 535 6.853872 CCGTTCATTTCTAACACGATTTTCAA 59.146 34.615 0.00 0.00 32.51 2.69
535 536 6.017770 ACCGTTCATTTCTAACACGATTTTCA 60.018 34.615 0.00 0.00 32.51 2.69
536 537 6.368213 ACCGTTCATTTCTAACACGATTTTC 58.632 36.000 0.00 0.00 32.51 2.29
537 538 6.308371 ACCGTTCATTTCTAACACGATTTT 57.692 33.333 0.00 0.00 32.51 1.82
538 539 5.934935 ACCGTTCATTTCTAACACGATTT 57.065 34.783 0.00 0.00 32.51 2.17
539 540 5.237779 ACAACCGTTCATTTCTAACACGATT 59.762 36.000 0.00 0.00 32.51 3.34
540 541 4.753107 ACAACCGTTCATTTCTAACACGAT 59.247 37.500 0.00 0.00 32.51 3.73
541 542 4.121317 ACAACCGTTCATTTCTAACACGA 58.879 39.130 0.00 0.00 32.51 4.35
542 543 4.461992 ACAACCGTTCATTTCTAACACG 57.538 40.909 0.00 0.00 0.00 4.49
543 544 6.535274 ACTACAACCGTTCATTTCTAACAC 57.465 37.500 0.00 0.00 0.00 3.32
544 545 7.436118 AGTACTACAACCGTTCATTTCTAACA 58.564 34.615 0.00 0.00 0.00 2.41
545 546 7.880059 AGTACTACAACCGTTCATTTCTAAC 57.120 36.000 0.00 0.00 0.00 2.34
546 547 9.630098 CTTAGTACTACAACCGTTCATTTCTAA 57.370 33.333 0.91 0.00 0.00 2.10
547 548 8.796475 ACTTAGTACTACAACCGTTCATTTCTA 58.204 33.333 0.91 0.00 0.00 2.10
548 549 7.664758 ACTTAGTACTACAACCGTTCATTTCT 58.335 34.615 0.91 0.00 0.00 2.52
549 550 7.880059 ACTTAGTACTACAACCGTTCATTTC 57.120 36.000 0.91 0.00 0.00 2.17
550 551 8.579863 AGTACTTAGTACTACAACCGTTCATTT 58.420 33.333 21.95 0.00 45.99 2.32
551 552 8.115490 AGTACTTAGTACTACAACCGTTCATT 57.885 34.615 21.95 0.00 45.99 2.57
552 553 7.693969 AGTACTTAGTACTACAACCGTTCAT 57.306 36.000 21.95 0.00 45.99 2.57
553 554 7.510549 AAGTACTTAGTACTACAACCGTTCA 57.489 36.000 23.27 0.00 46.96 3.18
554 555 8.293157 AGAAAGTACTTAGTACTACAACCGTTC 58.707 37.037 23.27 19.43 46.96 3.95
555 556 8.171164 AGAAAGTACTTAGTACTACAACCGTT 57.829 34.615 23.27 12.98 46.96 4.44
556 557 7.663493 AGAGAAAGTACTTAGTACTACAACCGT 59.337 37.037 23.27 5.28 46.96 4.83
557 558 7.961827 CAGAGAAAGTACTTAGTACTACAACCG 59.038 40.741 23.27 9.29 46.96 4.44
558 559 8.791675 ACAGAGAAAGTACTTAGTACTACAACC 58.208 37.037 23.27 12.60 46.96 3.77
559 560 9.824534 GACAGAGAAAGTACTTAGTACTACAAC 57.175 37.037 23.27 15.34 46.96 3.32
560 561 9.790344 AGACAGAGAAAGTACTTAGTACTACAA 57.210 33.333 23.27 0.00 46.96 2.41
561 562 9.434420 GAGACAGAGAAAGTACTTAGTACTACA 57.566 37.037 23.27 0.00 46.96 2.74
562 563 9.434420 TGAGACAGAGAAAGTACTTAGTACTAC 57.566 37.037 23.27 19.13 46.96 2.73
565 566 8.948145 TCATGAGACAGAGAAAGTACTTAGTAC 58.052 37.037 14.13 14.13 39.10 2.73
566 567 9.688091 ATCATGAGACAGAGAAAGTACTTAGTA 57.312 33.333 8.92 0.00 0.00 1.82
567 568 8.588290 ATCATGAGACAGAGAAAGTACTTAGT 57.412 34.615 8.92 0.00 0.00 2.24
582 583 9.816354 TCGAAAATGTTCTTATATCATGAGACA 57.184 29.630 0.09 0.00 0.00 3.41
584 585 9.816354 TGTCGAAAATGTTCTTATATCATGAGA 57.184 29.630 0.09 0.00 0.00 3.27
585 586 9.855361 GTGTCGAAAATGTTCTTATATCATGAG 57.145 33.333 0.09 0.00 0.00 2.90
586 587 9.599866 AGTGTCGAAAATGTTCTTATATCATGA 57.400 29.630 0.00 0.00 0.00 3.07
603 604 9.011095 CCCTCTCATAATATACTAGTGTCGAAA 57.989 37.037 5.39 0.00 0.00 3.46
604 605 8.380867 TCCCTCTCATAATATACTAGTGTCGAA 58.619 37.037 5.39 0.00 0.00 3.71
605 606 7.914859 TCCCTCTCATAATATACTAGTGTCGA 58.085 38.462 5.39 0.00 0.00 4.20
606 607 7.281324 CCTCCCTCTCATAATATACTAGTGTCG 59.719 44.444 5.39 0.00 0.00 4.35
607 608 7.558444 CCCTCCCTCTCATAATATACTAGTGTC 59.442 44.444 5.39 0.00 0.00 3.67
608 609 7.242101 TCCCTCCCTCTCATAATATACTAGTGT 59.758 40.741 5.39 0.39 0.00 3.55
609 610 7.644062 TCCCTCCCTCTCATAATATACTAGTG 58.356 42.308 5.39 0.00 0.00 2.74
610 611 7.466213 ACTCCCTCCCTCTCATAATATACTAGT 59.534 40.741 0.00 0.00 0.00 2.57
611 612 7.878495 ACTCCCTCCCTCTCATAATATACTAG 58.122 42.308 0.00 0.00 0.00 2.57
612 613 7.848821 ACTCCCTCCCTCTCATAATATACTA 57.151 40.000 0.00 0.00 0.00 1.82
613 614 6.744802 ACTCCCTCCCTCTCATAATATACT 57.255 41.667 0.00 0.00 0.00 2.12
616 617 9.086059 TCTAATACTCCCTCCCTCTCATAATAT 57.914 37.037 0.00 0.00 0.00 1.28
617 618 8.478214 TCTAATACTCCCTCCCTCTCATAATA 57.522 38.462 0.00 0.00 0.00 0.98
618 619 7.363759 TCTAATACTCCCTCCCTCTCATAAT 57.636 40.000 0.00 0.00 0.00 1.28
619 620 6.751510 GCTCTAATACTCCCTCCCTCTCATAA 60.752 46.154 0.00 0.00 0.00 1.90
620 621 5.281297 GCTCTAATACTCCCTCCCTCTCATA 60.281 48.000 0.00 0.00 0.00 2.15
621 622 4.510205 GCTCTAATACTCCCTCCCTCTCAT 60.510 50.000 0.00 0.00 0.00 2.90
622 623 3.181427 GCTCTAATACTCCCTCCCTCTCA 60.181 52.174 0.00 0.00 0.00 3.27
623 624 3.181427 TGCTCTAATACTCCCTCCCTCTC 60.181 52.174 0.00 0.00 0.00 3.20
624 625 2.792370 TGCTCTAATACTCCCTCCCTCT 59.208 50.000 0.00 0.00 0.00 3.69
625 626 3.246416 TGCTCTAATACTCCCTCCCTC 57.754 52.381 0.00 0.00 0.00 4.30
626 627 3.051727 ACTTGCTCTAATACTCCCTCCCT 60.052 47.826 0.00 0.00 0.00 4.20
627 628 3.310193 ACTTGCTCTAATACTCCCTCCC 58.690 50.000 0.00 0.00 0.00 4.30
628 629 7.778185 TTATACTTGCTCTAATACTCCCTCC 57.222 40.000 0.00 0.00 0.00 4.30
632 633 9.589111 GCCTTATTATACTTGCTCTAATACTCC 57.411 37.037 0.00 0.00 0.00 3.85
941 944 1.005924 AGAGGTGGCGATTTGGGAAAT 59.994 47.619 0.00 0.00 0.00 2.17
944 947 1.602237 GAGAGGTGGCGATTTGGGA 59.398 57.895 0.00 0.00 0.00 4.37
1030 1033 4.373116 GGCTTCACGAGGTGCCGA 62.373 66.667 0.00 0.00 35.79 5.54
2952 3215 6.016555 ACCTTAGACCATTTTGCCAAATAGT 58.983 36.000 0.00 0.00 30.90 2.12
3457 3793 7.040132 GCCTAGCCTTTATTTTTATCATGAGCT 60.040 37.037 0.09 2.25 0.00 4.09
3473 3809 1.625818 CCATATCCGAGCCTAGCCTTT 59.374 52.381 0.00 0.00 0.00 3.11
3894 4230 0.904865 AGACGCTCAACATCCTCCCA 60.905 55.000 0.00 0.00 0.00 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.