Multiple sequence alignment - TraesCS1A01G436200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G436200 chr1A 100.000 5384 0 0 1 5384 586520878 586515495 0.000000e+00 9943.0
1 TraesCS1A01G436200 chr1A 81.758 2127 311 47 2257 4371 586924613 586922552 0.000000e+00 1707.0
2 TraesCS1A01G436200 chr1A 83.234 1843 260 29 2281 4101 586712569 586710754 0.000000e+00 1646.0
3 TraesCS1A01G436200 chr1A 80.000 2035 350 45 2361 4371 586332539 586330538 0.000000e+00 1450.0
4 TraesCS1A01G436200 chr1A 82.489 1639 161 48 219 1806 586318550 586316987 0.000000e+00 1321.0
5 TraesCS1A01G436200 chr1A 82.360 1661 160 52 198 1806 586348953 586347374 0.000000e+00 1321.0
6 TraesCS1A01G436200 chr1A 76.978 2098 395 64 2353 4416 586316233 586314190 0.000000e+00 1118.0
7 TraesCS1A01G436200 chr1A 79.777 1617 257 48 2361 3957 586362289 586360723 0.000000e+00 1110.0
8 TraesCS1A01G436200 chr1A 82.753 1235 157 28 1049 2253 586925865 586924657 0.000000e+00 1050.0
9 TraesCS1A01G436200 chr1A 77.390 1747 337 41 2645 4374 586381341 586379636 0.000000e+00 985.0
10 TraesCS1A01G436200 chr1A 83.156 1128 120 32 786 1853 586714428 586713311 0.000000e+00 966.0
11 TraesCS1A01G436200 chr1A 84.256 813 126 2 1007 1818 586366343 586365532 0.000000e+00 791.0
12 TraesCS1A01G436200 chr1A 79.252 294 47 11 5024 5314 586921792 586921510 5.500000e-45 193.0
13 TraesCS1A01G436200 chr1A 93.333 45 2 1 26 70 550598206 550598163 1.250000e-06 65.8
14 TraesCS1A01G436200 chr1B 91.133 3406 258 22 999 4371 679710581 679707187 0.000000e+00 4577.0
15 TraesCS1A01G436200 chr1B 85.750 1207 133 20 630 1806 679656854 679655657 0.000000e+00 1240.0
16 TraesCS1A01G436200 chr1B 77.433 2096 392 66 2353 4416 679654649 679652603 0.000000e+00 1175.0
17 TraesCS1A01G436200 chr1B 84.005 844 132 2 999 1839 679701925 679701082 0.000000e+00 808.0
18 TraesCS1A01G436200 chr1B 85.333 525 33 13 4 500 679657446 679656938 2.240000e-138 503.0
19 TraesCS1A01G436200 chr1B 91.613 310 17 5 4570 4879 679706665 679706365 2.320000e-113 420.0
20 TraesCS1A01G436200 chr1B 83.613 476 37 16 4878 5348 679706309 679705870 5.020000e-110 409.0
21 TraesCS1A01G436200 chr1B 87.797 295 28 3 4230 4516 679706960 679706666 6.680000e-89 339.0
22 TraesCS1A01G436200 chr1D 90.167 2217 196 13 2250 4455 487896094 487893889 0.000000e+00 2867.0
23 TraesCS1A01G436200 chr1D 81.153 2133 346 38 2260 4376 488484061 488486153 0.000000e+00 1661.0
24 TraesCS1A01G436200 chr1D 81.066 1257 181 30 1012 2251 487897349 487896133 0.000000e+00 950.0
25 TraesCS1A01G436200 chr1D 81.245 1189 163 34 917 2072 487841911 487840750 0.000000e+00 905.0
26 TraesCS1A01G436200 chr1D 81.572 369 25 14 174 517 487842574 487842224 1.150000e-66 265.0
27 TraesCS1A01G436200 chr1D 84.099 283 18 12 4821 5088 487893650 487893380 1.160000e-61 248.0
28 TraesCS1A01G436200 chr1D 91.473 129 10 1 4480 4607 487893892 487893764 5.540000e-40 176.0
29 TraesCS1A01G436200 chr1D 92.727 110 8 0 4679 4788 487893762 487893653 5.580000e-35 159.0
30 TraesCS1A01G436200 chr1D 89.655 116 12 0 5210 5325 487893245 487893130 1.210000e-31 148.0
31 TraesCS1A01G436200 chr1D 86.022 93 7 1 15 101 487842683 487842591 1.600000e-15 95.3
32 TraesCS1A01G436200 chr1D 100.000 29 0 0 5156 5184 487893271 487893243 3.000000e-03 54.7
33 TraesCS1A01G436200 chrUn 81.115 2134 342 39 2260 4376 8844831 8842742 0.000000e+00 1652.0
34 TraesCS1A01G436200 chr4A 74.951 515 118 9 3775 4282 729747453 729747963 5.430000e-55 226.0
35 TraesCS1A01G436200 chr4A 72.673 505 114 21 3793 4282 729708249 729708744 4.350000e-31 147.0
36 TraesCS1A01G436200 chr7D 76.033 363 78 7 3775 4131 10047896 10048255 4.280000e-41 180.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G436200 chr1A 586515495 586520878 5383 True 9943.000000 9943 100.000000 1 5384 1 chr1A.!!$R5 5383
1 TraesCS1A01G436200 chr1A 586330538 586332539 2001 True 1450.000000 1450 80.000000 2361 4371 1 chr1A.!!$R2 2010
2 TraesCS1A01G436200 chr1A 586347374 586348953 1579 True 1321.000000 1321 82.360000 198 1806 1 chr1A.!!$R3 1608
3 TraesCS1A01G436200 chr1A 586710754 586714428 3674 True 1306.000000 1646 83.195000 786 4101 2 chr1A.!!$R8 3315
4 TraesCS1A01G436200 chr1A 586314190 586318550 4360 True 1219.500000 1321 79.733500 219 4416 2 chr1A.!!$R6 4197
5 TraesCS1A01G436200 chr1A 586379636 586381341 1705 True 985.000000 985 77.390000 2645 4374 1 chr1A.!!$R4 1729
6 TraesCS1A01G436200 chr1A 586921510 586925865 4355 True 983.333333 1707 81.254333 1049 5314 3 chr1A.!!$R9 4265
7 TraesCS1A01G436200 chr1A 586360723 586366343 5620 True 950.500000 1110 82.016500 1007 3957 2 chr1A.!!$R7 2950
8 TraesCS1A01G436200 chr1B 679701082 679710581 9499 True 1310.600000 4577 87.632200 999 5348 5 chr1B.!!$R2 4349
9 TraesCS1A01G436200 chr1B 679652603 679657446 4843 True 972.666667 1240 82.838667 4 4416 3 chr1B.!!$R1 4412
10 TraesCS1A01G436200 chr1D 488484061 488486153 2092 False 1661.000000 1661 81.153000 2260 4376 1 chr1D.!!$F1 2116
11 TraesCS1A01G436200 chr1D 487893130 487897349 4219 True 657.528571 2867 89.883857 1012 5325 7 chr1D.!!$R2 4313
12 TraesCS1A01G436200 chr1D 487840750 487842683 1933 True 421.766667 905 82.946333 15 2072 3 chr1D.!!$R1 2057
13 TraesCS1A01G436200 chrUn 8842742 8844831 2089 True 1652.000000 1652 81.115000 2260 4376 1 chrUn.!!$R1 2116
14 TraesCS1A01G436200 chr4A 729747453 729747963 510 False 226.000000 226 74.951000 3775 4282 1 chr4A.!!$F2 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
557 603 0.103937 CACTCGCTTCCTCATCTCCC 59.896 60.000 0.00 0.00 0.00 4.30 F
985 1097 0.108898 CGCTGCTTCAGTCTGTAGCT 60.109 55.000 25.99 0.00 40.75 3.32 F
1287 1435 1.047596 AGTCTCGGGCTGATGATGCT 61.048 55.000 0.00 0.00 0.00 3.79 F
1539 1693 1.891150 GAGGAGGTTGTCACTCGGTTA 59.109 52.381 0.00 0.00 35.82 2.85 F
3238 6508 1.202533 ACAAGGTCCGGCGATTATCTG 60.203 52.381 9.30 0.54 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1898 2083 1.071699 ACCATAAACAGACAGCACCGT 59.928 47.619 0.00 0.0 0.00 4.83 R
2778 6045 1.368203 TCCCACCCCTTCCTTGATCTA 59.632 52.381 0.00 0.0 0.00 1.98 R
3238 6508 2.035632 ACCACTAGCCATAGAGCTCAC 58.964 52.381 17.77 0.0 43.67 3.51 R
3467 6741 2.715046 CAGGGAGCTGCACAAATCTTA 58.285 47.619 7.79 0.0 0.00 2.10 R
4516 8200 0.037303 AGGGGTCATGCAACTCACTG 59.963 55.000 0.00 0.0 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 7.424803 TGAATTCTTGTGTACAACTGAAATGG 58.575 34.615 7.05 0.00 0.00 3.16
95 102 7.095229 GGCATTTTGAAGAAAGGTTGGTATTTC 60.095 37.037 0.00 0.00 35.99 2.17
104 111 4.198028 AGGTTGGTATTTCGGTGTCTAC 57.802 45.455 0.00 0.00 0.00 2.59
119 126 4.304110 GTGTCTACATGAAAGACGGTGAA 58.696 43.478 20.39 6.99 45.19 3.18
135 142 3.809832 CGGTGAAATCTCAGTGAAAGTGT 59.190 43.478 0.00 0.00 38.75 3.55
148 155 5.048991 CAGTGAAAGTGTAAACCATGGGTAC 60.049 44.000 18.09 17.44 30.78 3.34
152 159 2.983898 AGTGTAAACCATGGGTACACCT 59.016 45.455 34.87 25.98 42.75 4.00
153 160 3.396611 AGTGTAAACCATGGGTACACCTT 59.603 43.478 34.87 24.50 42.75 3.50
215 222 6.679919 GCTTACGTTACGTGATTTATTTGTCC 59.320 38.462 21.22 0.00 41.39 4.02
263 280 0.249741 GCTGGGCCGTACGTGATAAT 60.250 55.000 15.21 0.00 0.00 1.28
287 309 4.196778 TTGTGGGCCTGGTTCGCA 62.197 61.111 4.53 0.00 0.00 5.10
299 330 1.078848 GTTCGCAGGGCATCTGTCT 60.079 57.895 7.89 0.00 45.08 3.41
302 333 1.078918 CGCAGGGCATCTGTCTTCA 60.079 57.895 7.89 0.00 45.08 3.02
331 362 2.852075 TGAACAGTCCCGGGCCTT 60.852 61.111 18.49 3.23 0.00 4.35
341 372 3.419759 CGGGCCTTTTCGTCGGTG 61.420 66.667 0.84 0.00 0.00 4.94
342 373 3.053896 GGGCCTTTTCGTCGGTGG 61.054 66.667 0.84 0.00 0.00 4.61
440 486 1.380246 TTCTAGGGTTCCGCCGCTA 60.380 57.895 0.00 0.00 38.44 4.26
470 516 1.691434 CTACCTCCTCATCTCCTTGCC 59.309 57.143 0.00 0.00 0.00 4.52
493 539 2.886124 GCTCGTTGCTACTCCCGC 60.886 66.667 0.00 0.00 38.95 6.13
517 563 3.215568 CACCGCCAACACAAGCCA 61.216 61.111 0.00 0.00 0.00 4.75
518 564 2.906897 ACCGCCAACACAAGCCAG 60.907 61.111 0.00 0.00 0.00 4.85
519 565 3.673484 CCGCCAACACAAGCCAGG 61.673 66.667 0.00 0.00 0.00 4.45
520 566 2.906897 CGCCAACACAAGCCAGGT 60.907 61.111 0.00 0.00 0.00 4.00
521 567 2.489275 CGCCAACACAAGCCAGGTT 61.489 57.895 0.00 0.00 0.00 3.50
523 569 0.177836 GCCAACACAAGCCAGGTTTT 59.822 50.000 0.00 0.00 0.00 2.43
524 570 1.406751 GCCAACACAAGCCAGGTTTTT 60.407 47.619 0.00 0.00 0.00 1.94
543 589 1.906994 TTTTTCCGCATCCGCACTCG 61.907 55.000 0.00 0.00 38.40 4.18
547 593 3.918220 CGCATCCGCACTCGCTTC 61.918 66.667 0.00 0.00 38.40 3.86
548 594 3.567797 GCATCCGCACTCGCTTCC 61.568 66.667 0.00 0.00 38.36 3.46
549 595 2.185350 CATCCGCACTCGCTTCCT 59.815 61.111 0.00 0.00 35.30 3.36
550 596 1.880340 CATCCGCACTCGCTTCCTC 60.880 63.158 0.00 0.00 35.30 3.71
551 597 2.351244 ATCCGCACTCGCTTCCTCA 61.351 57.895 0.00 0.00 35.30 3.86
552 598 1.680522 ATCCGCACTCGCTTCCTCAT 61.681 55.000 0.00 0.00 35.30 2.90
553 599 1.880340 CCGCACTCGCTTCCTCATC 60.880 63.158 0.00 0.00 35.30 2.92
554 600 1.140589 CGCACTCGCTTCCTCATCT 59.859 57.895 0.00 0.00 35.30 2.90
555 601 0.869454 CGCACTCGCTTCCTCATCTC 60.869 60.000 0.00 0.00 35.30 2.75
556 602 0.529555 GCACTCGCTTCCTCATCTCC 60.530 60.000 0.00 0.00 34.30 3.71
557 603 0.103937 CACTCGCTTCCTCATCTCCC 59.896 60.000 0.00 0.00 0.00 4.30
558 604 1.045911 ACTCGCTTCCTCATCTCCCC 61.046 60.000 0.00 0.00 0.00 4.81
559 605 1.001631 TCGCTTCCTCATCTCCCCA 59.998 57.895 0.00 0.00 0.00 4.96
560 606 1.144936 CGCTTCCTCATCTCCCCAC 59.855 63.158 0.00 0.00 0.00 4.61
561 607 1.333636 CGCTTCCTCATCTCCCCACT 61.334 60.000 0.00 0.00 0.00 4.00
562 608 0.467804 GCTTCCTCATCTCCCCACTC 59.532 60.000 0.00 0.00 0.00 3.51
563 609 1.127343 CTTCCTCATCTCCCCACTCC 58.873 60.000 0.00 0.00 0.00 3.85
564 610 0.326618 TTCCTCATCTCCCCACTCCC 60.327 60.000 0.00 0.00 0.00 4.30
565 611 2.136878 CCTCATCTCCCCACTCCCG 61.137 68.421 0.00 0.00 0.00 5.14
566 612 1.381872 CTCATCTCCCCACTCCCGT 60.382 63.158 0.00 0.00 0.00 5.28
567 613 1.381327 TCATCTCCCCACTCCCGTC 60.381 63.158 0.00 0.00 0.00 4.79
594 640 4.565850 AGATCCGCCTCCTCCCCC 62.566 72.222 0.00 0.00 0.00 5.40
624 691 1.442148 GGCTCGTCTCCGCCTAATT 59.558 57.895 0.00 0.00 42.98 1.40
672 739 2.539081 GGTGCCTTCCCCAACCTCT 61.539 63.158 0.00 0.00 0.00 3.69
713 781 2.863401 TCGATCAGGTAACACATCGG 57.137 50.000 10.48 0.00 45.47 4.18
717 785 0.908910 TCAGGTAACACATCGGCCAT 59.091 50.000 2.24 0.00 41.41 4.40
769 842 4.516698 CCAACTAACTCTTGCTTCACACAT 59.483 41.667 0.00 0.00 0.00 3.21
770 843 5.334414 CCAACTAACTCTTGCTTCACACATC 60.334 44.000 0.00 0.00 0.00 3.06
772 845 1.800805 ACTCTTGCTTCACACATCGG 58.199 50.000 0.00 0.00 0.00 4.18
773 846 0.445436 CTCTTGCTTCACACATCGGC 59.555 55.000 0.00 0.00 0.00 5.54
774 847 0.955428 TCTTGCTTCACACATCGGCC 60.955 55.000 0.00 0.00 0.00 6.13
775 848 1.228094 TTGCTTCACACATCGGCCA 60.228 52.632 2.24 0.00 0.00 5.36
776 849 0.608856 TTGCTTCACACATCGGCCAT 60.609 50.000 2.24 0.00 0.00 4.40
778 851 0.940126 GCTTCACACATCGGCCATAG 59.060 55.000 2.24 0.00 0.00 2.23
852 949 1.305887 AATCTCCGACCTCCCCGTT 60.306 57.895 0.00 0.00 0.00 4.44
913 1011 0.325933 CACTGCAGAGGATCCCAACA 59.674 55.000 23.35 0.92 33.66 3.33
925 1023 2.978010 CCAACACCTCGCCACCAC 60.978 66.667 0.00 0.00 0.00 4.16
932 1037 1.737793 CACCTCGCCACCACTTAATTC 59.262 52.381 0.00 0.00 0.00 2.17
985 1097 0.108898 CGCTGCTTCAGTCTGTAGCT 60.109 55.000 25.99 0.00 40.75 3.32
1077 1206 1.078214 CACCGCACTCATGGGTGAT 60.078 57.895 30.02 10.77 44.08 3.06
1156 1285 4.776322 CCATGAACGCCGCCCTGA 62.776 66.667 0.00 0.00 0.00 3.86
1164 1293 2.360475 GCCGCCCTGAAGAAGCTT 60.360 61.111 0.00 0.00 0.00 3.74
1287 1435 1.047596 AGTCTCGGGCTGATGATGCT 61.048 55.000 0.00 0.00 0.00 3.79
1363 1517 2.828868 GCATAGCCCACCGGATGA 59.171 61.111 9.46 0.00 0.00 2.92
1408 1562 4.520846 CGAATGCTCGGCGGCAAC 62.521 66.667 22.91 18.35 45.68 4.17
1485 1639 2.799371 CGAGCGGTCTACCAGGAC 59.201 66.667 13.48 0.00 35.14 3.85
1539 1693 1.891150 GAGGAGGTTGTCACTCGGTTA 59.109 52.381 0.00 0.00 35.82 2.85
1554 1708 5.749109 CACTCGGTTAATGGATACTCAGAAC 59.251 44.000 0.00 0.00 37.61 3.01
1617 1771 4.119136 GCAAAACTACACTTGCCAAACAT 58.881 39.130 0.00 0.00 41.69 2.71
1806 1960 9.349713 AGACAACATCTGAAAAATAACAGGTAA 57.650 29.630 0.00 0.00 35.81 2.85
1879 2063 8.397906 ACATTTTGTACTGATATTTGTCCATCG 58.602 33.333 0.00 0.00 0.00 3.84
1898 2083 5.334319 CATCGAAGCTGCATTTTGATTGTA 58.666 37.500 1.02 0.00 0.00 2.41
1899 2084 4.722194 TCGAAGCTGCATTTTGATTGTAC 58.278 39.130 1.02 0.00 0.00 2.90
2171 4849 5.228945 AGGATTAAACATATCCCTCCACG 57.771 43.478 0.00 0.00 42.12 4.94
2184 4865 2.888414 CCCTCCACGCCTTTTCTTTTTA 59.112 45.455 0.00 0.00 0.00 1.52
2186 4867 4.485163 CCTCCACGCCTTTTCTTTTTATG 58.515 43.478 0.00 0.00 0.00 1.90
2303 5536 9.950680 ATGATATGCTTTGGTATTACTTTTTCG 57.049 29.630 0.00 0.00 0.00 3.46
2308 5541 7.136119 TGCTTTGGTATTACTTTTTCGTTCAG 58.864 34.615 0.00 0.00 0.00 3.02
2391 5654 4.168014 TGTCAAGATTTTGATGATTGCGC 58.832 39.130 0.00 0.00 44.62 6.09
2399 5662 7.533426 AGATTTTGATGATTGCGCCTATAATC 58.467 34.615 4.18 8.16 34.64 1.75
2403 5668 7.977789 TTGATGATTGCGCCTATAATCTAAA 57.022 32.000 16.32 7.71 35.02 1.85
2406 5671 9.836864 TGATGATTGCGCCTATAATCTAAATAT 57.163 29.630 16.32 4.40 35.02 1.28
2631 5898 5.310409 TGGAACCTCTCAGTGAAGAAAAT 57.690 39.130 0.00 0.00 0.00 1.82
2708 5975 4.682860 CCAATTTGAACAAGTCATGACTGC 59.317 41.667 28.52 17.66 41.58 4.40
2778 6045 4.284746 GGTAGCCTATTAGCCAGTCAAGAT 59.715 45.833 0.00 0.00 0.00 2.40
3238 6508 1.202533 ACAAGGTCCGGCGATTATCTG 60.203 52.381 9.30 0.54 0.00 2.90
3394 6668 6.436027 AGGATTGATCAAGGTAGTACTCAGA 58.564 40.000 14.54 0.00 0.00 3.27
3467 6741 5.014755 TGAGGTATTTGTATGTTTGGGGACT 59.985 40.000 0.00 0.00 0.00 3.85
3563 6847 5.770162 TCGACAGCATTCCTTCAGATATAGA 59.230 40.000 0.00 0.00 0.00 1.98
3592 6876 6.235231 TGTCCCACTTGTCCTATCTTTATC 57.765 41.667 0.00 0.00 0.00 1.75
3599 6883 9.482627 CCACTTGTCCTATCTTTATCTTCATAC 57.517 37.037 0.00 0.00 0.00 2.39
3637 6921 3.887110 CAGATTGCTGCCTGAATGGATTA 59.113 43.478 0.00 0.00 37.63 1.75
3665 6949 7.840342 ATATGAAATCACTGAACAGTCTGAC 57.160 36.000 6.91 0.00 40.20 3.51
3687 6971 3.680196 TCGGTAGGCTGGGGGACT 61.680 66.667 0.00 0.00 37.00 3.85
3727 7014 6.697641 ATGGGATGAACGGTATTATAGGTT 57.302 37.500 0.00 0.00 0.00 3.50
3729 7016 6.292923 TGGGATGAACGGTATTATAGGTTTG 58.707 40.000 0.00 0.00 0.00 2.93
3749 7036 1.086634 GGCGAGCTGACCAATCTCAC 61.087 60.000 0.00 0.00 0.00 3.51
3836 7123 7.391148 TTGGAAAGCTATGTAACCTCAAATC 57.609 36.000 0.00 0.00 0.00 2.17
3844 7131 7.550906 AGCTATGTAACCTCAAATCTCTTCAAC 59.449 37.037 0.00 0.00 0.00 3.18
3858 7145 4.039730 TCTCTTCAACTCTCAGGGTTTCAG 59.960 45.833 0.00 0.00 0.00 3.02
3982 7282 2.115291 GGTCTCCATTGCCTTCGCC 61.115 63.158 0.00 0.00 0.00 5.54
4017 7317 1.340248 GTGGAGGAGACGTCAACTGAA 59.660 52.381 19.50 2.83 0.00 3.02
4021 7321 3.056465 GGAGGAGACGTCAACTGAAGATT 60.056 47.826 19.50 0.00 0.00 2.40
4076 7376 0.443869 CTCAAATTCAGGCCGTCACG 59.556 55.000 0.00 0.00 0.00 4.35
4149 7449 5.875359 GGAGTACTTCGAATTTTGGACTGAT 59.125 40.000 4.83 0.00 0.00 2.90
4168 7468 3.321968 TGATGAAGACGCTATGGCATACT 59.678 43.478 2.32 0.00 38.60 2.12
4191 7491 1.229082 ATTCGAGGCGGGGGCTATA 60.229 57.895 0.00 0.00 38.98 1.31
4274 7948 1.352156 GAGCACCTGTTACGCCTTCG 61.352 60.000 0.00 0.00 42.43 3.79
4287 7961 2.232941 ACGCCTTCGGAAGATCAAACTA 59.767 45.455 19.06 0.00 41.60 2.24
4371 8045 1.599797 AAACCGCCCTTCCGTTGAG 60.600 57.895 0.00 0.00 0.00 3.02
4452 8128 2.630580 GGCCAATCTGTTTAACCCACAA 59.369 45.455 0.00 0.00 0.00 3.33
4493 8176 8.247562 GGCCATTTAATTAATGCGGATATGTAA 58.752 33.333 0.00 0.00 41.93 2.41
4494 8177 9.072294 GCCATTTAATTAATGCGGATATGTAAC 57.928 33.333 10.66 0.00 41.93 2.50
4503 8187 6.959639 ATGCGGATATGTAACTTGGAAATT 57.040 33.333 0.00 0.00 0.00 1.82
4510 8194 8.695456 GGATATGTAACTTGGAAATTTCATGGT 58.305 33.333 19.49 10.99 0.00 3.55
4512 8196 6.723298 TGTAACTTGGAAATTTCATGGTGT 57.277 33.333 19.49 7.85 0.00 4.16
4516 8200 5.600696 ACTTGGAAATTTCATGGTGTTGTC 58.399 37.500 19.49 0.00 0.00 3.18
4549 8233 2.070039 CCCCTGCCCGTAATCCAGA 61.070 63.158 0.00 0.00 0.00 3.86
4555 8239 1.522092 CCCGTAATCCAGAGCAGCA 59.478 57.895 0.00 0.00 0.00 4.41
4556 8240 0.531532 CCCGTAATCCAGAGCAGCAG 60.532 60.000 0.00 0.00 0.00 4.24
4590 8274 5.413309 AGTGTCCTGATTTGGTTAGAGAG 57.587 43.478 0.00 0.00 0.00 3.20
4613 8297 1.556911 GATGAGAAGTTGGAGGCCAGA 59.443 52.381 5.01 0.00 33.81 3.86
4616 8300 2.174639 TGAGAAGTTGGAGGCCAGAAAA 59.825 45.455 5.01 0.00 33.81 2.29
4640 8324 5.882557 ACTACATGGCATTTTAGGAAGAGTG 59.117 40.000 14.48 0.00 0.00 3.51
4646 8330 4.321230 GGCATTTTAGGAAGAGTGTGGTTG 60.321 45.833 0.00 0.00 0.00 3.77
4650 8334 5.828299 TTTAGGAAGAGTGTGGTTGTTTG 57.172 39.130 0.00 0.00 0.00 2.93
4661 8345 1.755959 TGGTTGTTTGTGCAGCTCATT 59.244 42.857 0.00 0.00 0.00 2.57
4670 8354 2.490509 TGTGCAGCTCATTGGAGAAATG 59.509 45.455 0.00 0.00 46.10 2.32
4723 8407 8.048534 ACAATCCAGAGTTTTATGACAAGATG 57.951 34.615 0.00 0.00 0.00 2.90
4788 8475 5.587388 ATTATGTTTCTCCAGTGGCAATG 57.413 39.130 8.18 8.18 0.00 2.82
4971 8831 5.468592 TGTTGGCATGCATACTTTTACTTG 58.531 37.500 21.36 0.00 0.00 3.16
5039 9164 5.296151 TCATATACAAAGAGGGGAGCTTG 57.704 43.478 0.00 0.00 0.00 4.01
5045 9170 0.539051 AAGAGGGGAGCTTGTCATCG 59.461 55.000 0.00 0.00 0.00 3.84
5077 9203 4.395231 TGCTCTGAAAATGATGCTCTCTTG 59.605 41.667 0.00 0.00 0.00 3.02
5082 9208 4.940046 TGAAAATGATGCTCTCTTGAGTCC 59.060 41.667 0.00 0.00 42.13 3.85
5095 9221 7.254727 GCTCTCTTGAGTCCATGTTATTCATTC 60.255 40.741 0.00 0.00 42.13 2.67
5117 9243 3.381908 CGGGAGATACACTAGAAAGCACT 59.618 47.826 0.00 0.00 0.00 4.40
5118 9244 4.498345 CGGGAGATACACTAGAAAGCACTC 60.498 50.000 0.00 0.00 0.00 3.51
5119 9245 4.202172 GGGAGATACACTAGAAAGCACTCC 60.202 50.000 0.00 0.00 40.11 3.85
5148 9274 7.515957 GTTTTAGAAAACATCCATCATGCTG 57.484 36.000 12.00 0.00 45.72 4.41
5193 9403 7.221452 GGCACACAAAAGATTATAAGCATTCAG 59.779 37.037 3.17 0.00 0.00 3.02
5198 9408 9.846248 ACAAAAGATTATAAGCATTCAGTTGAC 57.154 29.630 3.17 0.00 0.00 3.18
5245 9455 9.826574 AAGTTTAACTTGTTGATACAGAGTACA 57.173 29.630 9.77 0.00 37.00 2.90
5269 9480 7.383572 ACACATGAGAATAATTAGCACTCGATC 59.616 37.037 0.00 0.00 0.00 3.69
5286 9498 4.060205 TCGATCGAATGTACGTATCTGGA 58.940 43.478 16.99 0.00 34.70 3.86
5290 9502 6.576662 ATCGAATGTACGTATCTGGATTCT 57.423 37.500 0.00 0.00 34.70 2.40
5308 9520 5.106515 GGATTCTTTTCTGCTCAGTGGTTAC 60.107 44.000 0.00 0.00 0.00 2.50
5314 9526 6.659745 TTTCTGCTCAGTGGTTACTAGTTA 57.340 37.500 0.00 0.00 34.74 2.24
5329 9541 9.097257 GGTTACTAGTTAGTACTGTAGTGAGAG 57.903 40.741 18.00 1.21 38.43 3.20
5331 9543 6.949715 ACTAGTTAGTACTGTAGTGAGAGCT 58.050 40.000 5.39 0.00 35.78 4.09
5338 9550 3.768878 ACTGTAGTGAGAGCTTACCACT 58.231 45.455 16.91 16.91 42.94 4.00
5341 9553 5.135508 TGTAGTGAGAGCTTACCACTTTC 57.864 43.478 17.62 13.02 41.01 2.62
5343 9555 2.028930 AGTGAGAGCTTACCACTTTCCG 60.029 50.000 9.79 0.00 37.86 4.30
5345 9557 0.036294 AGAGCTTACCACTTTCCGGC 60.036 55.000 0.00 0.00 0.00 6.13
5346 9558 0.321298 GAGCTTACCACTTTCCGGCA 60.321 55.000 0.00 0.00 0.00 5.69
5347 9559 0.321653 AGCTTACCACTTTCCGGCAG 60.322 55.000 0.00 0.00 0.00 4.85
5348 9560 0.321298 GCTTACCACTTTCCGGCAGA 60.321 55.000 7.44 0.00 0.00 4.26
5359 9580 2.242572 CCGGCAGATGCACAGATCG 61.243 63.158 7.19 0.00 44.36 3.69
5366 9587 4.151335 GGCAGATGCACAGATCGTTATTAG 59.849 45.833 7.19 0.00 44.36 1.73
5367 9588 4.747108 GCAGATGCACAGATCGTTATTAGT 59.253 41.667 0.00 0.00 41.59 2.24
5370 9591 7.116948 GCAGATGCACAGATCGTTATTAGTTAT 59.883 37.037 0.00 0.00 41.59 1.89
5375 9596 9.124807 TGCACAGATCGTTATTAGTTATATTCG 57.875 33.333 0.00 0.00 0.00 3.34
5376 9597 9.338291 GCACAGATCGTTATTAGTTATATTCGA 57.662 33.333 0.00 0.00 33.43 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 7.359181 CGAAATACCAACCTTTCTTCAAAATGC 60.359 37.037 0.00 0.00 30.80 3.56
95 102 2.259618 CCGTCTTTCATGTAGACACCG 58.740 52.381 21.87 12.98 41.64 4.94
104 111 4.692625 ACTGAGATTTCACCGTCTTTCATG 59.307 41.667 0.00 0.00 0.00 3.07
119 126 6.207417 CCATGGTTTACACTTTCACTGAGATT 59.793 38.462 2.57 0.00 0.00 2.40
135 142 6.298441 GTACTAAGGTGTACCCATGGTTTA 57.702 41.667 11.73 0.00 37.43 2.01
172 179 0.999406 GCACATACTGCAGTGTACCG 59.001 55.000 29.57 13.31 46.29 4.02
215 222 6.454715 GCCCACGAACTAAAATAAACTACTCG 60.455 42.308 0.00 0.00 0.00 4.18
254 271 2.811431 CCACAACCACACATTATCACGT 59.189 45.455 0.00 0.00 0.00 4.49
263 280 2.123939 CAGGCCCACAACCACACA 60.124 61.111 0.00 0.00 0.00 3.72
287 309 1.137872 GACGATGAAGACAGATGCCCT 59.862 52.381 0.00 0.00 0.00 5.19
299 330 3.069586 ACTGTTCAGAGGTTGACGATGAA 59.930 43.478 6.83 0.00 34.94 2.57
302 333 2.028930 GGACTGTTCAGAGGTTGACGAT 60.029 50.000 6.83 0.00 34.94 3.73
448 494 2.957312 GCAAGGAGATGAGGAGGTAGGT 60.957 54.545 0.00 0.00 0.00 3.08
500 546 3.198236 CTGGCTTGTGTTGGCGGTG 62.198 63.158 0.00 0.00 0.00 4.94
501 547 2.906897 CTGGCTTGTGTTGGCGGT 60.907 61.111 0.00 0.00 0.00 5.68
543 589 0.467804 GAGTGGGGAGATGAGGAAGC 59.532 60.000 0.00 0.00 0.00 3.86
545 591 0.326618 GGGAGTGGGGAGATGAGGAA 60.327 60.000 0.00 0.00 0.00 3.36
546 592 1.314867 GGGAGTGGGGAGATGAGGA 59.685 63.158 0.00 0.00 0.00 3.71
547 593 2.136878 CGGGAGTGGGGAGATGAGG 61.137 68.421 0.00 0.00 0.00 3.86
548 594 1.381872 ACGGGAGTGGGGAGATGAG 60.382 63.158 0.00 0.00 44.82 2.90
549 595 2.777853 ACGGGAGTGGGGAGATGA 59.222 61.111 0.00 0.00 44.82 2.92
612 679 1.397390 GGACGGGAATTAGGCGGAGA 61.397 60.000 0.00 0.00 0.00 3.71
624 691 4.816984 GAGAGGAGGCGGACGGGA 62.817 72.222 0.00 0.00 0.00 5.14
672 739 2.654877 GCGGAGGAAACAGGTCGA 59.345 61.111 0.00 0.00 0.00 4.20
713 781 1.622811 AGAGTAGATGCAGGCTATGGC 59.377 52.381 0.00 0.00 37.82 4.40
717 785 7.926555 GTGTAAATTAAGAGTAGATGCAGGCTA 59.073 37.037 0.00 0.00 0.00 3.93
772 845 2.282745 GGGGATGCAGGCTATGGC 60.283 66.667 0.00 0.00 37.82 4.40
773 846 2.033141 CGGGGATGCAGGCTATGG 59.967 66.667 0.00 0.00 0.00 2.74
774 847 2.670934 GCGGGGATGCAGGCTATG 60.671 66.667 0.00 0.00 34.15 2.23
775 848 3.958860 GGCGGGGATGCAGGCTAT 61.959 66.667 0.00 0.00 36.28 2.97
783 856 4.569180 AGGAATGCGGCGGGGATG 62.569 66.667 9.78 0.00 0.00 3.51
784 857 3.774599 GAAGGAATGCGGCGGGGAT 62.775 63.158 9.78 0.00 0.00 3.85
852 949 2.040278 CCTGATGTGGTGAAGGAAGGAA 59.960 50.000 0.00 0.00 30.92 3.36
885 983 3.231889 CTCTGCAGTGGCGAGGTGT 62.232 63.158 14.67 0.00 45.35 4.16
886 984 2.433838 CTCTGCAGTGGCGAGGTG 60.434 66.667 14.67 0.00 45.35 4.00
887 985 3.699894 CCTCTGCAGTGGCGAGGT 61.700 66.667 21.14 0.00 46.44 3.85
913 1011 1.628846 AGAATTAAGTGGTGGCGAGGT 59.371 47.619 0.00 0.00 0.00 3.85
985 1097 1.381191 TCATCTGGGCGGCTGACTA 60.381 57.895 9.56 0.00 0.00 2.59
997 1109 1.951130 CGATTCCGCCGGTCATCTG 60.951 63.158 1.63 0.07 0.00 2.90
1077 1206 4.165372 ACCCCTTTGAACTTCTTGTACTCA 59.835 41.667 0.00 0.00 0.00 3.41
1287 1435 7.050377 CAGTATTCTTGATGAAGCTTCCCTTA 58.950 38.462 23.42 5.29 38.18 2.69
1363 1517 1.546548 GGCAAGGGTCTTGAGCTCTTT 60.547 52.381 16.19 0.00 0.00 2.52
1404 1558 5.451908 CAATCATCAACCATATACCGTTGC 58.548 41.667 8.31 0.00 39.36 4.17
1408 1562 5.106555 GCTTCCAATCATCAACCATATACCG 60.107 44.000 0.00 0.00 0.00 4.02
1415 1569 2.449464 CAGGCTTCCAATCATCAACCA 58.551 47.619 0.00 0.00 0.00 3.67
1464 1618 2.360726 TGGTAGACCGCTCGCAGA 60.361 61.111 0.00 0.00 39.43 4.26
1539 1693 6.656693 CCTTGAGTTTGTTCTGAGTATCCATT 59.343 38.462 0.00 0.00 0.00 3.16
1554 1708 4.142182 ACAATTGACACCACCTTGAGTTTG 60.142 41.667 13.59 0.00 0.00 2.93
1617 1771 4.002982 GTGAGCCAATCTTGTCATACACA 58.997 43.478 0.00 0.00 0.00 3.72
1731 1885 2.736978 CGAGTGTGAGATGTATCAGGC 58.263 52.381 0.00 0.00 0.00 4.85
1806 1960 3.969287 ATGACTGCCGATAGTATGCAT 57.031 42.857 3.79 3.79 33.97 3.96
1879 2063 3.853671 CCGTACAATCAAAATGCAGCTTC 59.146 43.478 0.00 0.00 0.00 3.86
1898 2083 1.071699 ACCATAAACAGACAGCACCGT 59.928 47.619 0.00 0.00 0.00 4.83
1899 2084 1.808411 ACCATAAACAGACAGCACCG 58.192 50.000 0.00 0.00 0.00 4.94
2303 5536 9.250624 AGAAGCTAACGAATTATCATACTGAAC 57.749 33.333 0.00 0.00 0.00 3.18
2308 5541 9.464714 TTCTGAGAAGCTAACGAATTATCATAC 57.535 33.333 0.00 0.00 0.00 2.39
2631 5898 7.502226 ACTCTGTTCACCAATAACATTCTTGAA 59.498 33.333 0.00 0.00 36.33 2.69
2647 5914 3.871594 CCGGATCCAAATACTCTGTTCAC 59.128 47.826 13.41 0.00 0.00 3.18
2708 5975 5.095490 GCCCATGACACTTCTTTAAAATCG 58.905 41.667 0.00 0.00 0.00 3.34
2778 6045 1.368203 TCCCACCCCTTCCTTGATCTA 59.632 52.381 0.00 0.00 0.00 1.98
3238 6508 2.035632 ACCACTAGCCATAGAGCTCAC 58.964 52.381 17.77 0.00 43.67 3.51
3467 6741 2.715046 CAGGGAGCTGCACAAATCTTA 58.285 47.619 7.79 0.00 0.00 2.10
3563 6847 1.499007 AGGACAAGTGGGACAAATGGT 59.501 47.619 0.00 0.00 44.16 3.55
3592 6876 8.892723 TCTGTGGTTGCAATTATAAGTATGAAG 58.107 33.333 0.59 0.00 0.00 3.02
3637 6921 9.376075 CAGACTGTTCAGTGATTTCATATTACT 57.624 33.333 10.29 0.00 0.00 2.24
3665 6949 1.153168 CCCCAGCCTACCGACATTG 60.153 63.158 0.00 0.00 0.00 2.82
3687 6971 3.330405 TCCCATTCAATTCACTCTGACCA 59.670 43.478 0.00 0.00 0.00 4.02
3727 7014 1.377202 GATTGGTCAGCTCGCCCAA 60.377 57.895 9.93 9.93 42.12 4.12
3729 7016 1.522580 GAGATTGGTCAGCTCGCCC 60.523 63.158 1.03 0.00 0.00 6.13
3749 7036 3.594603 ACAGACTGATTGTTAGGTCCG 57.405 47.619 10.08 0.00 0.00 4.79
3836 7123 4.039730 TCTGAAACCCTGAGAGTTGAAGAG 59.960 45.833 0.00 0.00 0.00 2.85
3844 7131 4.342862 TTTCAGTCTGAAACCCTGAGAG 57.657 45.455 21.59 0.00 41.02 3.20
3982 7282 1.669115 CCACACGCAGGTCAAGGAG 60.669 63.158 0.00 0.00 0.00 3.69
4017 7317 3.368948 GCTCTCCAAGAAGACGGAAATCT 60.369 47.826 0.00 0.00 0.00 2.40
4021 7321 1.633774 AGCTCTCCAAGAAGACGGAA 58.366 50.000 0.00 0.00 0.00 4.30
4149 7449 3.457234 CAAGTATGCCATAGCGTCTTCA 58.543 45.455 0.00 0.00 44.31 3.02
4168 7468 3.792736 CCCCGCCTCGAATCCCAA 61.793 66.667 0.00 0.00 0.00 4.12
4191 7491 1.703513 GAGAGGGTTTGTAGGTTGGGT 59.296 52.381 0.00 0.00 0.00 4.51
4274 7948 4.779993 ACCCTCCATAGTTTGATCTTCC 57.220 45.455 0.00 0.00 0.00 3.46
4287 7961 0.987294 CACCAGAGTCAACCCTCCAT 59.013 55.000 0.00 0.00 31.53 3.41
4475 8158 8.458573 TTCCAAGTTACATATCCGCATTAATT 57.541 30.769 0.00 0.00 0.00 1.40
4493 8176 5.128499 TGACAACACCATGAAATTTCCAAGT 59.872 36.000 15.48 6.95 0.00 3.16
4494 8177 5.599732 TGACAACACCATGAAATTTCCAAG 58.400 37.500 15.48 6.35 0.00 3.61
4503 8187 3.558931 ACTCACTGACAACACCATGAA 57.441 42.857 0.00 0.00 0.00 2.57
4510 8194 2.613595 GTCATGCAACTCACTGACAACA 59.386 45.455 10.29 0.00 35.35 3.33
4512 8196 2.221169 GGTCATGCAACTCACTGACAA 58.779 47.619 15.63 0.00 36.16 3.18
4516 8200 0.037303 AGGGGTCATGCAACTCACTG 59.963 55.000 0.00 0.00 0.00 3.66
4549 8233 4.527583 GCTAGGCGCTCTGCTGCT 62.528 66.667 7.64 0.00 45.43 4.24
4590 8274 1.134250 GGCCTCCAACTTCTCATCTCC 60.134 57.143 0.00 0.00 0.00 3.71
4613 8297 7.451566 ACTCTTCCTAAAATGCCATGTAGTTTT 59.548 33.333 0.00 0.00 0.00 2.43
4616 8300 5.882557 CACTCTTCCTAAAATGCCATGTAGT 59.117 40.000 0.00 0.00 0.00 2.73
4640 8324 0.455410 TGAGCTGCACAAACAACCAC 59.545 50.000 1.02 0.00 0.00 4.16
4646 8330 1.881973 TCTCCAATGAGCTGCACAAAC 59.118 47.619 3.43 0.00 38.58 2.93
4650 8334 2.159282 CCATTTCTCCAATGAGCTGCAC 60.159 50.000 1.02 0.00 44.78 4.57
4661 8345 1.780309 ACAACAGTCCCCATTTCTCCA 59.220 47.619 0.00 0.00 0.00 3.86
4670 8354 1.463553 CCCTTTGCACAACAGTCCCC 61.464 60.000 0.00 0.00 0.00 4.81
4717 8401 6.430925 TGGTTCTGGAATGTAAAGTCATCTTG 59.569 38.462 0.00 0.00 33.79 3.02
4723 8407 4.652822 ACCTGGTTCTGGAATGTAAAGTC 58.347 43.478 0.00 0.00 0.00 3.01
4734 8418 2.513753 TGTGCAATTACCTGGTTCTGG 58.486 47.619 3.84 0.00 0.00 3.86
4771 8458 3.733443 AAACATTGCCACTGGAGAAAC 57.267 42.857 0.00 0.00 0.00 2.78
4797 8484 7.004086 ACTTGGAAGTTAATCATCCAACAGAA 58.996 34.615 12.79 0.00 45.27 3.02
4838 8525 4.124238 GGCATTCATGACATCCCAATTTG 58.876 43.478 0.00 0.00 35.34 2.32
4971 8831 2.427506 CCCTGAACTTGTCTAGCAACC 58.572 52.381 0.00 0.00 32.90 3.77
5032 9144 1.134965 AGCAGTACGATGACAAGCTCC 60.135 52.381 0.00 0.00 30.10 4.70
5039 9164 3.003793 TCAGAGCATAGCAGTACGATGAC 59.996 47.826 0.00 0.00 33.53 3.06
5045 9170 6.656945 CATCATTTTCAGAGCATAGCAGTAC 58.343 40.000 0.00 0.00 0.00 2.73
5077 9203 4.703897 TCCCGAATGAATAACATGGACTC 58.296 43.478 0.00 0.00 39.39 3.36
5082 9208 6.931281 AGTGTATCTCCCGAATGAATAACATG 59.069 38.462 0.00 0.00 39.39 3.21
5095 9221 3.381908 AGTGCTTTCTAGTGTATCTCCCG 59.618 47.826 0.00 0.00 0.00 5.14
5139 9265 4.270325 CAGATGTATATCGGCAGCATGATG 59.730 45.833 6.59 6.59 36.92 3.07
5140 9266 4.081254 ACAGATGTATATCGGCAGCATGAT 60.081 41.667 0.00 0.00 36.92 2.45
5141 9267 3.259123 ACAGATGTATATCGGCAGCATGA 59.741 43.478 0.00 0.00 36.92 3.07
5142 9268 3.593096 ACAGATGTATATCGGCAGCATG 58.407 45.455 0.00 0.00 38.38 4.06
5148 9274 3.563808 TGCCAAAACAGATGTATATCGGC 59.436 43.478 6.80 6.80 38.38 5.54
5245 9455 6.584184 CGATCGAGTGCTAATTATTCTCATGT 59.416 38.462 10.26 0.00 0.00 3.21
5269 9480 7.435488 AGAAAAGAATCCAGATACGTACATTCG 59.565 37.037 0.00 0.00 0.00 3.34
5286 9498 5.625150 AGTAACCACTGAGCAGAAAAGAAT 58.375 37.500 4.21 0.00 32.25 2.40
5290 9502 5.546621 ACTAGTAACCACTGAGCAGAAAA 57.453 39.130 4.21 0.00 36.14 2.29
5308 9520 7.852971 AAGCTCTCACTACAGTACTAACTAG 57.147 40.000 0.00 0.00 33.48 2.57
5314 9526 4.701171 GTGGTAAGCTCTCACTACAGTACT 59.299 45.833 0.00 0.00 0.00 2.73
5329 9541 0.321298 TCTGCCGGAAAGTGGTAAGC 60.321 55.000 5.05 0.00 0.00 3.09
5331 9543 1.948611 GCATCTGCCGGAAAGTGGTAA 60.949 52.381 5.05 0.00 34.31 2.85
5338 9550 0.035152 ATCTGTGCATCTGCCGGAAA 60.035 50.000 5.05 0.00 41.18 3.13
5341 9553 2.242572 CGATCTGTGCATCTGCCGG 61.243 63.158 0.00 0.00 41.18 6.13
5343 9555 1.939974 TAACGATCTGTGCATCTGCC 58.060 50.000 0.00 0.00 41.18 4.85
5345 9557 6.834959 AACTAATAACGATCTGTGCATCTG 57.165 37.500 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.