Multiple sequence alignment - TraesCS1A01G424200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G424200 chr1A 100.000 4014 0 0 970 4983 579296187 579300200 0.000000e+00 7413.0
1 TraesCS1A01G424200 chr1A 100.000 420 0 0 1 420 579295218 579295637 0.000000e+00 776.0
2 TraesCS1A01G424200 chr1D 93.795 2659 134 16 1941 4589 482838891 482836254 0.000000e+00 3967.0
3 TraesCS1A01G424200 chr1D 93.319 913 44 5 970 1875 482839903 482839001 0.000000e+00 1332.0
4 TraesCS1A01G424200 chr1D 97.574 371 9 0 4590 4960 447759947 447760317 1.960000e-178 636.0
5 TraesCS1A01G424200 chr1D 94.960 377 17 2 4584 4960 277081815 277082189 1.550000e-164 590.0
6 TraesCS1A01G424200 chr1D 96.875 32 1 0 34 65 482841328 482841297 3.000000e-03 54.7
7 TraesCS1A01G424200 chr1B 90.147 2385 160 27 2241 4588 671201400 671199054 0.000000e+00 3033.0
8 TraesCS1A01G424200 chr1B 89.353 1268 86 22 975 2217 671202722 671201479 0.000000e+00 1548.0
9 TraesCS1A01G424200 chr4A 97.333 375 10 0 4590 4964 430871749 430872123 5.440000e-179 638.0
10 TraesCS1A01G424200 chr7D 97.035 371 11 0 4590 4960 620597522 620597892 4.240000e-175 625.0
11 TraesCS1A01G424200 chr7A 97.035 371 11 0 4590 4960 41993581 41993951 4.240000e-175 625.0
12 TraesCS1A01G424200 chr5D 96.063 381 13 2 4586 4965 14600746 14600367 1.970000e-173 619.0
13 TraesCS1A01G424200 chr5D 95.148 371 18 0 4590 4960 202503983 202504353 2.000000e-163 586.0
14 TraesCS1A01G424200 chr3D 96.021 377 13 2 4586 4960 395783688 395784064 3.300000e-171 612.0
15 TraesCS1A01G424200 chr3D 85.338 532 75 3 976 1505 310923398 310922868 9.430000e-152 547.0
16 TraesCS1A01G424200 chr3D 78.033 478 81 19 1025 1489 457018915 457019381 3.800000e-71 279.0
17 TraesCS1A01G424200 chr3D 80.896 335 50 11 2951 3282 310920863 310920540 8.280000e-63 252.0
18 TraesCS1A01G424200 chr4D 95.418 371 17 0 4590 4960 31214298 31213928 4.300000e-165 592.0
19 TraesCS1A01G424200 chr3B 85.448 536 75 3 973 1506 410040724 410041258 5.640000e-154 555.0
20 TraesCS1A01G424200 chr3B 78.448 464 82 14 1035 1489 603601812 603602266 2.270000e-73 287.0
21 TraesCS1A01G424200 chr3B 81.009 337 46 13 2951 3282 410043253 410043576 8.280000e-63 252.0
22 TraesCS1A01G424200 chr3A 85.206 534 76 3 973 1504 421118799 421119331 3.390000e-151 545.0
23 TraesCS1A01G424200 chr3A 78.013 473 90 13 1025 1489 599861202 599861668 8.160000e-73 285.0
24 TraesCS1A01G424200 chr3A 81.250 336 46 12 2951 3282 421121353 421121675 6.400000e-64 255.0
25 TraesCS1A01G424200 chr6D 78.827 392 69 14 1029 1413 472358883 472358499 8.280000e-63 252.0
26 TraesCS1A01G424200 chr5B 81.000 300 52 5 1034 1330 647944169 647943872 3.000000e-57 233.0
27 TraesCS1A01G424200 chr7B 94.643 56 3 0 2450 2505 331058281 331058336 2.470000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G424200 chr1A 579295218 579300200 4982 False 4094.500000 7413 100.0000 1 4983 2 chr1A.!!$F1 4982
1 TraesCS1A01G424200 chr1D 482836254 482841328 5074 True 1784.566667 3967 94.6630 34 4589 3 chr1D.!!$R1 4555
2 TraesCS1A01G424200 chr1B 671199054 671202722 3668 True 2290.500000 3033 89.7500 975 4588 2 chr1B.!!$R1 3613
3 TraesCS1A01G424200 chr3D 310920540 310923398 2858 True 399.500000 547 83.1170 976 3282 2 chr3D.!!$R1 2306
4 TraesCS1A01G424200 chr3B 410040724 410043576 2852 False 403.500000 555 83.2285 973 3282 2 chr3B.!!$F2 2309
5 TraesCS1A01G424200 chr3A 421118799 421121675 2876 False 400.000000 545 83.2280 973 3282 2 chr3A.!!$F2 2309

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
209 232 0.038166 AATCCACGCCACATTCCACT 59.962 50.000 0.00 0.0 0.00 4.00 F
321 787 0.171903 CCACCTCGACCGAACGTTAT 59.828 55.000 0.00 0.0 34.70 1.89 F
324 790 0.248784 CCTCGACCGAACGTTATCCC 60.249 60.000 0.00 0.0 34.70 3.85 F
325 791 0.248784 CTCGACCGAACGTTATCCCC 60.249 60.000 0.00 0.0 34.70 4.81 F
2068 3079 0.250467 ATCCCTGGCCATCGATTTCG 60.250 55.000 5.51 0.0 41.45 3.46 F
3298 4651 1.813178 GAGTAACTCCAGCAAAAGCCC 59.187 52.381 0.00 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1861 2824 0.106819 GAGATGCACCTGCCCAGAAT 60.107 55.000 0.0 0.0 41.18 2.40 R
1912 2884 0.750911 CTCATTTCCCAGCCTCTGCC 60.751 60.000 0.0 0.0 38.69 4.85 R
1953 2964 1.699634 TGGGAAAAGGAGACACAGAGG 59.300 52.381 0.0 0.0 0.00 3.69 R
2281 3570 1.992557 TCAAGTGGTTTATCTGGGGCT 59.007 47.619 0.0 0.0 0.00 5.19 R
3456 4809 3.338249 ACAGAGATGACACAAATTCCCG 58.662 45.455 0.0 0.0 0.00 5.14 R
4628 6020 0.034896 GATCGGCATACCCCACGATT 59.965 55.000 0.0 0.0 44.99 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.614673 CCGCTTGACTGTTTGTGC 57.385 55.556 0.00 0.00 0.00 4.57
18 19 1.008538 CCGCTTGACTGTTTGTGCC 60.009 57.895 0.00 0.00 0.00 5.01
19 20 1.369209 CGCTTGACTGTTTGTGCCG 60.369 57.895 0.00 0.00 0.00 5.69
20 21 1.658409 GCTTGACTGTTTGTGCCGC 60.658 57.895 0.00 0.00 0.00 6.53
21 22 1.369209 CTTGACTGTTTGTGCCGCG 60.369 57.895 0.00 0.00 0.00 6.46
22 23 3.462333 TTGACTGTTTGTGCCGCGC 62.462 57.895 0.00 0.00 0.00 6.86
62 63 4.996434 ACACCAGGCAGCAGCGAC 62.996 66.667 0.00 0.00 43.41 5.19
91 111 4.025401 GGAAAGGCACCACGCACG 62.025 66.667 0.00 0.00 45.17 5.34
93 113 2.281484 AAAGGCACCACGCACGAT 60.281 55.556 0.00 0.00 45.17 3.73
94 114 2.240612 GAAAGGCACCACGCACGATC 62.241 60.000 0.00 0.00 45.17 3.69
116 139 4.994471 GAACGTTCCGGCCGGGTT 62.994 66.667 42.36 35.50 37.00 4.11
120 143 4.646877 GTTCCGGCCGGGTTGGAA 62.647 66.667 42.36 26.78 42.00 3.53
121 144 3.653078 TTCCGGCCGGGTTGGAAT 61.653 61.111 42.36 0.00 42.00 3.01
122 145 3.929334 TTCCGGCCGGGTTGGAATG 62.929 63.158 42.36 15.31 42.00 2.67
127 150 3.439540 CCGGGTTGGAATGGCACG 61.440 66.667 0.00 0.00 42.00 5.34
129 152 2.034999 GGGTTGGAATGGCACGGA 59.965 61.111 0.00 0.00 0.00 4.69
131 154 2.700773 GGTTGGAATGGCACGGAGC 61.701 63.158 0.00 0.00 44.65 4.70
140 163 2.280797 GCACGGAGCCACTGTTGA 60.281 61.111 0.00 0.00 35.72 3.18
141 164 2.607892 GCACGGAGCCACTGTTGAC 61.608 63.158 0.00 0.00 35.72 3.18
142 165 1.069765 CACGGAGCCACTGTTGACT 59.930 57.895 0.00 0.00 35.72 3.41
143 166 1.069765 ACGGAGCCACTGTTGACTG 59.930 57.895 0.00 0.00 33.91 3.51
144 167 1.069765 CGGAGCCACTGTTGACTGT 59.930 57.895 0.00 0.00 0.00 3.55
145 168 1.224069 CGGAGCCACTGTTGACTGTG 61.224 60.000 12.51 12.51 42.92 3.66
158 181 2.666190 CTGTGGTGCGGTGGACTG 60.666 66.667 0.00 0.00 0.00 3.51
159 182 3.460672 CTGTGGTGCGGTGGACTGT 62.461 63.158 0.00 0.00 0.00 3.55
160 183 2.972505 GTGGTGCGGTGGACTGTG 60.973 66.667 0.00 0.00 0.00 3.66
162 185 4.927782 GGTGCGGTGGACTGTGCA 62.928 66.667 0.00 0.00 34.44 4.57
163 186 2.899838 GTGCGGTGGACTGTGCAA 60.900 61.111 2.79 0.00 39.34 4.08
164 187 2.899838 TGCGGTGGACTGTGCAAC 60.900 61.111 7.34 7.34 33.80 4.17
181 204 1.754380 AACAGTCCACGGCAGTAGCA 61.754 55.000 0.00 0.00 44.61 3.49
182 205 1.005037 CAGTCCACGGCAGTAGCAA 60.005 57.895 0.00 0.00 44.61 3.91
185 208 2.031919 CCACGGCAGTAGCAACCA 59.968 61.111 0.00 0.00 44.61 3.67
186 209 1.599518 CCACGGCAGTAGCAACCAA 60.600 57.895 0.00 0.00 44.61 3.67
187 210 0.960364 CCACGGCAGTAGCAACCAAT 60.960 55.000 0.00 0.00 44.61 3.16
189 212 0.676782 ACGGCAGTAGCAACCAATCC 60.677 55.000 0.00 0.00 44.61 3.01
190 213 0.676466 CGGCAGTAGCAACCAATCCA 60.676 55.000 0.00 0.00 44.61 3.41
191 214 1.544724 GGCAGTAGCAACCAATCCAA 58.455 50.000 0.00 0.00 44.61 3.53
192 215 2.102578 GGCAGTAGCAACCAATCCAAT 58.897 47.619 0.00 0.00 44.61 3.16
194 217 2.099756 GCAGTAGCAACCAATCCAATCC 59.900 50.000 0.00 0.00 41.58 3.01
195 218 3.355378 CAGTAGCAACCAATCCAATCCA 58.645 45.455 0.00 0.00 0.00 3.41
196 219 3.129287 CAGTAGCAACCAATCCAATCCAC 59.871 47.826 0.00 0.00 0.00 4.02
197 220 1.176527 AGCAACCAATCCAATCCACG 58.823 50.000 0.00 0.00 0.00 4.94
198 221 0.458370 GCAACCAATCCAATCCACGC 60.458 55.000 0.00 0.00 0.00 5.34
199 222 0.173255 CAACCAATCCAATCCACGCC 59.827 55.000 0.00 0.00 0.00 5.68
200 223 0.251564 AACCAATCCAATCCACGCCA 60.252 50.000 0.00 0.00 0.00 5.69
201 224 0.965363 ACCAATCCAATCCACGCCAC 60.965 55.000 0.00 0.00 0.00 5.01
202 225 0.964860 CCAATCCAATCCACGCCACA 60.965 55.000 0.00 0.00 0.00 4.17
203 226 1.105457 CAATCCAATCCACGCCACAT 58.895 50.000 0.00 0.00 0.00 3.21
204 227 1.477700 CAATCCAATCCACGCCACATT 59.522 47.619 0.00 0.00 0.00 2.71
205 228 1.392589 ATCCAATCCACGCCACATTC 58.607 50.000 0.00 0.00 0.00 2.67
206 229 0.679640 TCCAATCCACGCCACATTCC 60.680 55.000 0.00 0.00 0.00 3.01
209 232 0.038166 AATCCACGCCACATTCCACT 59.962 50.000 0.00 0.00 0.00 4.00
221 244 0.389948 ATTCCACTCAACTCCGCGTC 60.390 55.000 4.92 0.00 0.00 5.19
224 247 1.284982 CCACTCAACTCCGCGTCAAG 61.285 60.000 4.92 1.69 0.00 3.02
225 248 1.006102 ACTCAACTCCGCGTCAAGG 60.006 57.895 4.92 0.00 0.00 3.61
226 249 1.289066 CTCAACTCCGCGTCAAGGA 59.711 57.895 4.92 0.00 36.20 3.36
229 252 1.156736 CAACTCCGCGTCAAGGAAAT 58.843 50.000 4.92 0.00 37.32 2.17
231 254 0.608640 ACTCCGCGTCAAGGAAATCT 59.391 50.000 4.92 0.00 37.32 2.40
232 255 1.822990 ACTCCGCGTCAAGGAAATCTA 59.177 47.619 4.92 0.00 37.32 1.98
233 256 2.159226 ACTCCGCGTCAAGGAAATCTAG 60.159 50.000 4.92 0.00 37.32 2.43
234 257 1.822990 TCCGCGTCAAGGAAATCTAGT 59.177 47.619 4.92 0.00 34.33 2.57
235 258 3.018856 TCCGCGTCAAGGAAATCTAGTA 58.981 45.455 4.92 0.00 34.33 1.82
236 259 3.114065 CCGCGTCAAGGAAATCTAGTAC 58.886 50.000 4.92 0.00 0.00 2.73
238 261 3.730061 CGCGTCAAGGAAATCTAGTACGT 60.730 47.826 0.00 0.00 31.71 3.57
241 264 5.448360 GCGTCAAGGAAATCTAGTACGTACT 60.448 44.000 29.62 29.62 40.24 2.73
242 265 6.190962 CGTCAAGGAAATCTAGTACGTACTC 58.809 44.000 30.53 15.59 37.73 2.59
243 266 6.493978 GTCAAGGAAATCTAGTACGTACTCC 58.506 44.000 30.53 23.05 37.73 3.85
244 267 6.094603 GTCAAGGAAATCTAGTACGTACTCCA 59.905 42.308 30.53 18.62 37.73 3.86
246 269 5.753716 AGGAAATCTAGTACGTACTCCACT 58.246 41.667 30.53 16.61 37.73 4.00
247 270 6.893583 AGGAAATCTAGTACGTACTCCACTA 58.106 40.000 30.53 12.84 37.73 2.74
248 271 6.765512 AGGAAATCTAGTACGTACTCCACTAC 59.234 42.308 30.53 18.07 37.73 2.73
250 273 7.254727 GGAAATCTAGTACGTACTCCACTACTG 60.255 44.444 30.53 11.97 37.73 2.74
251 274 4.437239 TCTAGTACGTACTCCACTACTGC 58.563 47.826 30.53 0.00 37.73 4.40
252 275 2.363683 AGTACGTACTCCACTACTGCC 58.636 52.381 22.45 0.00 0.00 4.85
253 276 2.086869 GTACGTACTCCACTACTGCCA 58.913 52.381 18.47 0.00 0.00 4.92
270 736 1.711060 CCACAAACCACGACGCAACT 61.711 55.000 0.00 0.00 0.00 3.16
283 749 4.263572 CAACTGCCCCACCCGTCA 62.264 66.667 0.00 0.00 0.00 4.35
284 750 3.494254 AACTGCCCCACCCGTCAA 61.494 61.111 0.00 0.00 0.00 3.18
285 751 3.785122 AACTGCCCCACCCGTCAAC 62.785 63.158 0.00 0.00 0.00 3.18
296 762 3.697747 CGTCAACGGCCCCCACTA 61.698 66.667 0.00 0.00 35.37 2.74
297 763 2.995547 GTCAACGGCCCCCACTAT 59.004 61.111 0.00 0.00 0.00 2.12
298 764 1.153229 GTCAACGGCCCCCACTATC 60.153 63.158 0.00 0.00 0.00 2.08
299 765 2.192175 CAACGGCCCCCACTATCC 59.808 66.667 0.00 0.00 0.00 2.59
300 766 2.285818 AACGGCCCCCACTATCCA 60.286 61.111 0.00 0.00 0.00 3.41
301 767 1.696314 AACGGCCCCCACTATCCAT 60.696 57.895 0.00 0.00 0.00 3.41
302 768 1.705997 AACGGCCCCCACTATCCATC 61.706 60.000 0.00 0.00 0.00 3.51
303 769 2.895424 CGGCCCCCACTATCCATCC 61.895 68.421 0.00 0.00 0.00 3.51
304 770 1.774217 GGCCCCCACTATCCATCCA 60.774 63.158 0.00 0.00 0.00 3.41
305 771 1.456287 GCCCCCACTATCCATCCAC 59.544 63.158 0.00 0.00 0.00 4.02
306 772 2.069165 GCCCCCACTATCCATCCACC 62.069 65.000 0.00 0.00 0.00 4.61
307 773 0.401979 CCCCCACTATCCATCCACCT 60.402 60.000 0.00 0.00 0.00 4.00
308 774 1.059913 CCCCACTATCCATCCACCTC 58.940 60.000 0.00 0.00 0.00 3.85
309 775 0.681733 CCCACTATCCATCCACCTCG 59.318 60.000 0.00 0.00 0.00 4.63
310 776 1.704641 CCACTATCCATCCACCTCGA 58.295 55.000 0.00 0.00 0.00 4.04
311 777 1.341531 CCACTATCCATCCACCTCGAC 59.658 57.143 0.00 0.00 0.00 4.20
312 778 1.341531 CACTATCCATCCACCTCGACC 59.658 57.143 0.00 0.00 0.00 4.79
313 779 0.598562 CTATCCATCCACCTCGACCG 59.401 60.000 0.00 0.00 0.00 4.79
314 780 0.184211 TATCCATCCACCTCGACCGA 59.816 55.000 0.00 0.00 0.00 4.69
315 781 0.686441 ATCCATCCACCTCGACCGAA 60.686 55.000 0.00 0.00 0.00 4.30
316 782 1.153628 CCATCCACCTCGACCGAAC 60.154 63.158 0.00 0.00 0.00 3.95
317 783 1.516386 CATCCACCTCGACCGAACG 60.516 63.158 0.00 0.00 0.00 3.95
318 784 1.975407 ATCCACCTCGACCGAACGT 60.975 57.895 0.00 0.00 34.70 3.99
319 785 1.530013 ATCCACCTCGACCGAACGTT 61.530 55.000 0.00 0.00 34.70 3.99
320 786 0.888736 TCCACCTCGACCGAACGTTA 60.889 55.000 0.00 0.00 34.70 3.18
321 787 0.171903 CCACCTCGACCGAACGTTAT 59.828 55.000 0.00 0.00 34.70 1.89
322 788 1.542544 CACCTCGACCGAACGTTATC 58.457 55.000 0.00 0.00 34.70 1.75
323 789 0.453390 ACCTCGACCGAACGTTATCC 59.547 55.000 0.00 0.00 34.70 2.59
324 790 0.248784 CCTCGACCGAACGTTATCCC 60.249 60.000 0.00 0.00 34.70 3.85
325 791 0.248784 CTCGACCGAACGTTATCCCC 60.249 60.000 0.00 0.00 34.70 4.81
326 792 1.227060 CGACCGAACGTTATCCCCC 60.227 63.158 0.00 0.00 0.00 5.40
327 793 1.227060 GACCGAACGTTATCCCCCG 60.227 63.158 0.00 0.00 0.00 5.73
328 794 2.586914 CCGAACGTTATCCCCCGC 60.587 66.667 0.00 0.00 0.00 6.13
329 795 2.586914 CGAACGTTATCCCCCGCC 60.587 66.667 0.00 0.00 0.00 6.13
330 796 2.586914 GAACGTTATCCCCCGCCG 60.587 66.667 0.00 0.00 0.00 6.46
331 797 4.843719 AACGTTATCCCCCGCCGC 62.844 66.667 0.00 0.00 0.00 6.53
1035 1541 3.387947 ACCTACACCTTCGGCCGG 61.388 66.667 27.83 12.37 0.00 6.13
1119 1625 3.869272 GCCTGCAAGTCCATCGCG 61.869 66.667 0.00 0.00 0.00 5.87
1494 2000 1.118965 TCTTCAAGCCCGGTCAGTGA 61.119 55.000 0.00 0.00 0.00 3.41
1503 2016 2.009774 CCCGGTCAGTGATTCATTGAC 58.990 52.381 25.85 25.85 45.89 3.18
1505 2018 3.118775 CCCGGTCAGTGATTCATTGACTA 60.119 47.826 29.78 4.15 45.88 2.59
1562 2078 7.233962 TGGTTACTGAATTTACTAGTGTCTGGA 59.766 37.037 5.39 0.00 0.00 3.86
1569 2085 5.740290 TTTACTAGTGTCTGGAAAGGGAG 57.260 43.478 5.39 0.00 0.00 4.30
1616 2132 4.318332 CCTTAGTTCATGTTGTCTCTGCA 58.682 43.478 0.00 0.00 0.00 4.41
1619 2135 6.072286 CCTTAGTTCATGTTGTCTCTGCAATT 60.072 38.462 0.00 0.00 0.00 2.32
1620 2136 7.119699 CCTTAGTTCATGTTGTCTCTGCAATTA 59.880 37.037 0.00 0.00 0.00 1.40
1621 2137 6.882610 AGTTCATGTTGTCTCTGCAATTAA 57.117 33.333 0.00 0.00 0.00 1.40
1622 2138 6.672147 AGTTCATGTTGTCTCTGCAATTAAC 58.328 36.000 0.00 0.00 0.00 2.01
1623 2139 5.627499 TCATGTTGTCTCTGCAATTAACC 57.373 39.130 0.00 0.00 0.00 2.85
1624 2140 5.069318 TCATGTTGTCTCTGCAATTAACCA 58.931 37.500 0.00 0.00 0.00 3.67
1625 2141 4.829064 TGTTGTCTCTGCAATTAACCAC 57.171 40.909 0.00 0.00 0.00 4.16
1626 2142 3.249799 TGTTGTCTCTGCAATTAACCACG 59.750 43.478 0.00 0.00 0.00 4.94
1627 2143 3.394674 TGTCTCTGCAATTAACCACGA 57.605 42.857 0.00 0.00 0.00 4.35
1628 2144 3.064207 TGTCTCTGCAATTAACCACGAC 58.936 45.455 0.00 0.00 0.00 4.34
1643 2159 5.814764 ACCACGACTTACTAGTGTATCTG 57.185 43.478 5.39 1.36 33.84 2.90
1795 2758 2.526120 GGTGCTGAAGCGGCGATAC 61.526 63.158 12.98 0.00 45.83 2.24
1801 2764 3.486252 GAAGCGGCGATACGGAGCT 62.486 63.158 12.98 0.00 40.20 4.09
1861 2824 3.068691 CTCTCCGGCGTTCCTCCA 61.069 66.667 6.01 0.00 0.00 3.86
1876 2839 2.036098 CCATTCTGGGCAGGTGCA 59.964 61.111 4.01 0.00 44.36 4.57
1878 2841 1.389609 CCATTCTGGGCAGGTGCATC 61.390 60.000 4.01 0.00 44.36 3.91
1887 2850 4.521062 AGGTGCATCTCGCGGCTC 62.521 66.667 6.13 2.05 46.97 4.70
1888 2851 4.819761 GGTGCATCTCGCGGCTCA 62.820 66.667 6.13 0.00 46.97 4.26
1889 2852 2.815211 GTGCATCTCGCGGCTCAA 60.815 61.111 6.13 0.00 46.97 3.02
1891 2854 1.884464 TGCATCTCGCGGCTCAATC 60.884 57.895 6.13 0.00 46.97 2.67
1892 2855 1.884464 GCATCTCGCGGCTCAATCA 60.884 57.895 6.13 0.00 0.00 2.57
1893 2856 1.431488 GCATCTCGCGGCTCAATCAA 61.431 55.000 6.13 0.00 0.00 2.57
1900 2863 1.059549 CGCGGCTCAATCAATTTTTGC 59.940 47.619 0.00 0.00 0.00 3.68
1904 2867 4.643953 CGGCTCAATCAATTTTTGCATTG 58.356 39.130 0.00 0.00 35.73 2.82
1926 2898 1.210204 ATTGAGGCAGAGGCTGGGAA 61.210 55.000 0.00 0.00 38.98 3.97
1927 2899 1.426251 TTGAGGCAGAGGCTGGGAAA 61.426 55.000 0.00 0.00 38.98 3.13
1931 2903 0.750911 GGCAGAGGCTGGGAAATGAG 60.751 60.000 0.00 0.00 40.87 2.90
1953 2964 7.103641 TGAGTTCAGTTATCCTAACATGAACC 58.896 38.462 21.98 17.76 44.70 3.62
1965 2976 1.625818 ACATGAACCCTCTGTGTCTCC 59.374 52.381 0.00 0.00 0.00 3.71
1967 2978 2.103153 TGAACCCTCTGTGTCTCCTT 57.897 50.000 0.00 0.00 0.00 3.36
1973 2984 1.699634 CCTCTGTGTCTCCTTTTCCCA 59.300 52.381 0.00 0.00 0.00 4.37
1981 2992 3.296854 GTCTCCTTTTCCCACTTGGTTT 58.703 45.455 0.00 0.00 34.77 3.27
1982 2993 3.704566 GTCTCCTTTTCCCACTTGGTTTT 59.295 43.478 0.00 0.00 34.77 2.43
1983 2994 3.704061 TCTCCTTTTCCCACTTGGTTTTG 59.296 43.478 0.00 0.00 34.77 2.44
1984 2995 3.704061 CTCCTTTTCCCACTTGGTTTTGA 59.296 43.478 0.00 0.00 34.77 2.69
1996 3007 6.438763 CACTTGGTTTTGATTACCAGAGAAC 58.561 40.000 0.00 0.00 45.80 3.01
2002 3013 4.720649 TTGATTACCAGAGAACGAGGAG 57.279 45.455 0.00 0.00 0.00 3.69
2023 3034 5.703130 GGAGGGTATATTTGATGCTGTTCTC 59.297 44.000 0.00 0.00 0.00 2.87
2068 3079 0.250467 ATCCCTGGCCATCGATTTCG 60.250 55.000 5.51 0.00 41.45 3.46
2125 3136 4.035102 GACCCCAAGGAGCGGCTT 62.035 66.667 2.97 0.00 36.73 4.35
2229 3463 4.982295 GCATGATAGTGTATTAGTGTCGCA 59.018 41.667 0.00 0.00 0.00 5.10
2249 3538 4.957967 CGCAATCTAATCTGTTTAAGCACG 59.042 41.667 0.00 0.00 0.00 5.34
2281 3570 4.842948 CCATGGATTAGAGAGGATGGAGAA 59.157 45.833 5.56 0.00 33.52 2.87
2395 3684 6.719301 ACTCAAATGATCTGAACTCCAATCT 58.281 36.000 0.00 0.00 0.00 2.40
2436 3725 4.462483 GGCAGTCCATTTAAATCTTGGTGA 59.538 41.667 0.00 0.00 0.00 4.02
2532 3822 6.386927 TGTTCAAGTCCCTGGATACTGATAAT 59.613 38.462 0.00 0.00 37.83 1.28
2547 3837 9.654663 GATACTGATAATAGTGGGACAATTACC 57.345 37.037 0.00 0.00 44.16 2.85
2748 4095 9.755804 TGCATATTTCTCTCTGTTCTGTATTAG 57.244 33.333 0.00 0.00 0.00 1.73
2759 4106 7.112122 TCTGTTCTGTATTAGTGCCAATCATT 58.888 34.615 0.00 0.00 0.00 2.57
2776 4123 5.841957 ATCATTTACTAAAAGGCTGCAGG 57.158 39.130 17.12 0.00 0.00 4.85
2881 4229 3.133362 ACTTGTCCACGTTTCTGGTAGAA 59.867 43.478 0.00 0.00 32.50 2.10
2900 4248 3.681835 GGTCCGTGTCGCCTGACT 61.682 66.667 0.00 0.00 45.70 3.41
2935 4283 6.992063 TTCTGTTTCAGCTCCTTAATCATC 57.008 37.500 0.00 0.00 0.00 2.92
3165 4518 3.520569 TCAAGTTGCTTGCAAACTTTCC 58.479 40.909 11.43 0.00 43.60 3.13
3298 4651 1.813178 GAGTAACTCCAGCAAAAGCCC 59.187 52.381 0.00 0.00 0.00 5.19
3319 4672 5.302823 GCCCAAATAAGTCCATTATCTGCTT 59.697 40.000 0.00 0.00 32.71 3.91
3429 4782 7.125507 AGACTAAACAGATCATCTTGGAGACAT 59.874 37.037 0.00 0.00 42.32 3.06
3450 4803 5.301805 ACATGGTAGGAGGTTTTGTTTCAAG 59.698 40.000 0.00 0.00 0.00 3.02
3456 4809 8.459635 GGTAGGAGGTTTTGTTTCAAGATATTC 58.540 37.037 0.00 0.00 0.00 1.75
3465 4818 8.755696 TTTGTTTCAAGATATTCGGGAATTTG 57.244 30.769 0.00 0.00 32.50 2.32
3594 4949 9.435688 AACTGCTTTGTTTTAAGAACTCATTTT 57.564 25.926 0.00 0.00 0.00 1.82
3676 5031 7.598493 GCTTCCATCAATACTGCTTTGTTTAAA 59.402 33.333 0.00 0.00 0.00 1.52
3833 5189 3.630312 TGCTCACAAGTCCCAAGTAAAAC 59.370 43.478 0.00 0.00 0.00 2.43
3853 5209 4.732285 ACGTTCAAATGAAGCACTACTG 57.268 40.909 0.00 0.00 34.27 2.74
3859 5215 5.610398 TCAAATGAAGCACTACTGAACTCA 58.390 37.500 0.00 0.00 0.00 3.41
3872 5232 6.996879 ACTACTGAACTCACTTACTCACTACA 59.003 38.462 0.00 0.00 0.00 2.74
4104 5467 1.135402 GCTTGGCCACGGAATTTAGTG 60.135 52.381 3.88 7.12 38.05 2.74
4219 5611 7.116075 TCTTGTGCTACCATGTTATACCATTT 58.884 34.615 0.00 0.00 0.00 2.32
4298 5690 8.696043 TCCTCCAATTGATCATTTATGTAAGG 57.304 34.615 7.12 3.43 0.00 2.69
4304 5696 9.252962 CAATTGATCATTTATGTAAGGAAAGGC 57.747 33.333 0.00 0.00 29.21 4.35
4309 5701 9.120538 GATCATTTATGTAAGGAAAGGCTTGTA 57.879 33.333 0.00 0.00 29.21 2.41
4310 5702 8.871629 TCATTTATGTAAGGAAAGGCTTGTAA 57.128 30.769 0.00 0.00 0.00 2.41
4313 5705 9.923143 ATTTATGTAAGGAAAGGCTTGTAAAAC 57.077 29.630 0.00 0.00 0.00 2.43
4316 5708 5.889289 TGTAAGGAAAGGCTTGTAAAACACT 59.111 36.000 0.00 0.00 0.00 3.55
4364 5756 8.380867 AGATCATGTTTCCAGATGAATATAGCA 58.619 33.333 0.00 0.00 36.33 3.49
4379 5771 8.034313 TGAATATAGCACAAAGGAAGGTATCT 57.966 34.615 0.00 0.00 0.00 1.98
4381 5773 5.957771 ATAGCACAAAGGAAGGTATCTGA 57.042 39.130 0.00 0.00 0.00 3.27
4386 5778 4.761739 CACAAAGGAAGGTATCTGAAAGCA 59.238 41.667 0.00 0.00 0.00 3.91
4413 5805 5.943416 CCTTTGTACTTGGACACATTATCCA 59.057 40.000 0.00 0.00 44.74 3.41
4419 5811 6.005066 ACTTGGACACATTATCCATCATCA 57.995 37.500 0.00 0.00 45.71 3.07
4429 5821 9.888878 CACATTATCCATCATCAACAACTATTC 57.111 33.333 0.00 0.00 0.00 1.75
4455 5847 1.955778 CATGTGTTTTGAGCTGGGTGA 59.044 47.619 0.00 0.00 0.00 4.02
4462 5854 2.435372 TTGAGCTGGGTGACACTTTT 57.565 45.000 5.39 0.00 0.00 2.27
4508 5900 6.855836 TCTTGCATTTCAACATGTATCCTTC 58.144 36.000 0.00 0.00 0.00 3.46
4510 5902 6.441093 TGCATTTCAACATGTATCCTTCTC 57.559 37.500 0.00 0.00 0.00 2.87
4555 5947 2.254546 TGTGCTTCGTCCACTTGATT 57.745 45.000 0.00 0.00 34.38 2.57
4619 6011 5.941555 ACTATATAGTGGGCCAATAGCTC 57.058 43.478 19.41 0.16 45.08 4.09
4620 6012 4.717280 ACTATATAGTGGGCCAATAGCTCC 59.283 45.833 19.41 0.00 43.71 4.70
4621 6013 1.819753 ATAGTGGGCCAATAGCTCCA 58.180 50.000 19.41 0.00 43.71 3.86
4623 6015 3.833653 TGGGCCAATAGCTCCACA 58.166 55.556 2.13 0.00 43.71 4.17
4624 6016 2.320671 TGGGCCAATAGCTCCACAT 58.679 52.632 2.13 0.00 43.71 3.21
4625 6017 1.517238 TGGGCCAATAGCTCCACATA 58.483 50.000 2.13 0.00 43.71 2.29
4626 6018 2.065007 TGGGCCAATAGCTCCACATAT 58.935 47.619 2.13 0.00 43.71 1.78
4627 6019 2.446666 TGGGCCAATAGCTCCACATATT 59.553 45.455 2.13 0.00 43.71 1.28
4628 6020 3.655291 TGGGCCAATAGCTCCACATATTA 59.345 43.478 2.13 0.00 43.71 0.98
4629 6021 4.105537 TGGGCCAATAGCTCCACATATTAA 59.894 41.667 2.13 0.00 43.71 1.40
4630 6022 5.222316 TGGGCCAATAGCTCCACATATTAAT 60.222 40.000 2.13 0.00 43.71 1.40
4631 6023 5.358160 GGGCCAATAGCTCCACATATTAATC 59.642 44.000 4.39 0.00 43.05 1.75
4632 6024 5.065218 GGCCAATAGCTCCACATATTAATCG 59.935 44.000 0.00 0.00 43.05 3.34
4633 6025 5.643777 GCCAATAGCTCCACATATTAATCGT 59.356 40.000 0.00 0.00 38.99 3.73
4634 6026 6.402550 GCCAATAGCTCCACATATTAATCGTG 60.403 42.308 9.83 9.83 38.99 4.35
4642 6034 4.394920 CCACATATTAATCGTGGGGTATGC 59.605 45.833 21.49 0.00 45.32 3.14
4643 6035 4.394920 CACATATTAATCGTGGGGTATGCC 59.605 45.833 9.18 0.00 0.00 4.40
4644 6036 2.178912 ATTAATCGTGGGGTATGCCG 57.821 50.000 0.00 0.00 34.97 5.69
4645 6037 1.121378 TTAATCGTGGGGTATGCCGA 58.879 50.000 0.00 0.00 34.97 5.54
4646 6038 1.344065 TAATCGTGGGGTATGCCGAT 58.656 50.000 0.00 0.00 41.41 4.18
4647 6039 0.034896 AATCGTGGGGTATGCCGATC 59.965 55.000 0.00 0.00 38.96 3.69
4648 6040 1.827399 ATCGTGGGGTATGCCGATCC 61.827 60.000 0.00 0.00 35.28 3.36
4649 6041 2.802724 CGTGGGGTATGCCGATCCA 61.803 63.158 0.00 0.00 34.97 3.41
4650 6042 1.529796 GTGGGGTATGCCGATCCAA 59.470 57.895 0.00 0.00 34.97 3.53
4651 6043 0.818040 GTGGGGTATGCCGATCCAAC 60.818 60.000 0.00 0.00 34.97 3.77
4652 6044 1.597027 GGGGTATGCCGATCCAACG 60.597 63.158 0.00 0.00 34.97 4.10
4660 6052 3.050703 CCGATCCAACGGTCAAGAG 57.949 57.895 0.00 0.00 46.70 2.85
4661 6053 0.530744 CCGATCCAACGGTCAAGAGA 59.469 55.000 0.00 0.00 46.70 3.10
4662 6054 1.137086 CCGATCCAACGGTCAAGAGAT 59.863 52.381 0.00 0.00 46.70 2.75
4663 6055 2.196749 CGATCCAACGGTCAAGAGATG 58.803 52.381 0.00 0.00 0.00 2.90
4664 6056 2.159240 CGATCCAACGGTCAAGAGATGA 60.159 50.000 0.00 0.00 35.05 2.92
4675 6067 3.525537 TCAAGAGATGACAAATCCGAGC 58.474 45.455 0.00 0.00 31.50 5.03
4676 6068 3.055891 TCAAGAGATGACAAATCCGAGCA 60.056 43.478 0.00 0.00 31.50 4.26
4677 6069 3.834489 AGAGATGACAAATCCGAGCAT 57.166 42.857 0.00 0.00 0.00 3.79
4678 6070 4.148128 AGAGATGACAAATCCGAGCATT 57.852 40.909 0.00 0.00 0.00 3.56
4679 6071 5.282055 AGAGATGACAAATCCGAGCATTA 57.718 39.130 0.00 0.00 0.00 1.90
4680 6072 5.862845 AGAGATGACAAATCCGAGCATTAT 58.137 37.500 0.00 0.00 0.00 1.28
4681 6073 5.931146 AGAGATGACAAATCCGAGCATTATC 59.069 40.000 0.00 0.00 0.00 1.75
4682 6074 5.614308 AGATGACAAATCCGAGCATTATCA 58.386 37.500 0.00 0.00 0.00 2.15
4683 6075 6.236409 AGATGACAAATCCGAGCATTATCAT 58.764 36.000 0.00 0.00 30.04 2.45
4684 6076 5.929697 TGACAAATCCGAGCATTATCATC 57.070 39.130 0.00 0.00 0.00 2.92
4685 6077 4.756642 TGACAAATCCGAGCATTATCATCC 59.243 41.667 0.00 0.00 0.00 3.51
4686 6078 3.748048 ACAAATCCGAGCATTATCATCCG 59.252 43.478 0.00 0.00 0.00 4.18
4687 6079 3.685139 AATCCGAGCATTATCATCCGT 57.315 42.857 0.00 0.00 0.00 4.69
4688 6080 3.685139 ATCCGAGCATTATCATCCGTT 57.315 42.857 0.00 0.00 0.00 4.44
4689 6081 2.754472 TCCGAGCATTATCATCCGTTG 58.246 47.619 0.00 0.00 0.00 4.10
4690 6082 1.800586 CCGAGCATTATCATCCGTTGG 59.199 52.381 0.00 0.00 0.00 3.77
4691 6083 2.547855 CCGAGCATTATCATCCGTTGGA 60.548 50.000 0.00 0.00 35.55 3.53
4692 6084 3.329386 CGAGCATTATCATCCGTTGGAT 58.671 45.455 0.00 0.00 44.21 3.41
4693 6085 4.494484 CGAGCATTATCATCCGTTGGATA 58.506 43.478 0.00 0.00 40.98 2.59
4694 6086 4.929211 CGAGCATTATCATCCGTTGGATAA 59.071 41.667 0.00 0.00 40.98 1.75
4695 6087 5.408299 CGAGCATTATCATCCGTTGGATAAA 59.592 40.000 0.00 0.00 40.98 1.40
4696 6088 6.401474 CGAGCATTATCATCCGTTGGATAAAG 60.401 42.308 0.00 0.00 40.98 1.85
4697 6089 6.299141 AGCATTATCATCCGTTGGATAAAGT 58.701 36.000 0.00 0.00 40.98 2.66
4698 6090 6.772716 AGCATTATCATCCGTTGGATAAAGTT 59.227 34.615 0.00 0.00 40.98 2.66
4699 6091 7.285401 AGCATTATCATCCGTTGGATAAAGTTT 59.715 33.333 0.00 0.00 40.98 2.66
4700 6092 7.920682 GCATTATCATCCGTTGGATAAAGTTTT 59.079 33.333 0.00 0.00 40.98 2.43
4701 6093 9.450807 CATTATCATCCGTTGGATAAAGTTTTC 57.549 33.333 0.00 0.00 40.98 2.29
4702 6094 8.568676 TTATCATCCGTTGGATAAAGTTTTCA 57.431 30.769 0.00 0.00 40.98 2.69
4703 6095 6.885952 TCATCCGTTGGATAAAGTTTTCAA 57.114 33.333 0.00 0.00 40.98 2.69
4704 6096 6.674066 TCATCCGTTGGATAAAGTTTTCAAC 58.326 36.000 14.10 14.10 40.98 3.18
4705 6097 6.488683 TCATCCGTTGGATAAAGTTTTCAACT 59.511 34.615 18.31 0.00 40.98 3.16
4706 6098 6.308371 TCCGTTGGATAAAGTTTTCAACTC 57.692 37.500 18.31 2.51 41.91 3.01
4707 6099 5.823570 TCCGTTGGATAAAGTTTTCAACTCA 59.176 36.000 18.31 8.66 41.91 3.41
4708 6100 6.488683 TCCGTTGGATAAAGTTTTCAACTCAT 59.511 34.615 18.31 0.00 41.91 2.90
4709 6101 7.662258 TCCGTTGGATAAAGTTTTCAACTCATA 59.338 33.333 18.31 6.58 41.91 2.15
4710 6102 7.962918 CCGTTGGATAAAGTTTTCAACTCATAG 59.037 37.037 18.31 8.97 41.91 2.23
4711 6103 7.962918 CGTTGGATAAAGTTTTCAACTCATAGG 59.037 37.037 18.31 6.46 41.91 2.57
4712 6104 9.010029 GTTGGATAAAGTTTTCAACTCATAGGA 57.990 33.333 15.65 0.00 41.91 2.94
4713 6105 9.753674 TTGGATAAAGTTTTCAACTCATAGGAT 57.246 29.630 0.00 0.00 41.91 3.24
4714 6106 9.753674 TGGATAAAGTTTTCAACTCATAGGATT 57.246 29.630 0.00 0.00 41.91 3.01
4718 6110 6.749923 AGTTTTCAACTCATAGGATTCTGC 57.250 37.500 0.00 0.00 37.02 4.26
4719 6111 5.649831 AGTTTTCAACTCATAGGATTCTGCC 59.350 40.000 0.00 0.00 37.02 4.85
4720 6112 4.842531 TTCAACTCATAGGATTCTGCCA 57.157 40.909 0.00 0.00 0.00 4.92
4721 6113 5.378230 TTCAACTCATAGGATTCTGCCAT 57.622 39.130 0.00 0.00 0.00 4.40
4722 6114 4.711399 TCAACTCATAGGATTCTGCCATG 58.289 43.478 0.00 0.00 0.00 3.66
4723 6115 4.164796 TCAACTCATAGGATTCTGCCATGT 59.835 41.667 0.00 0.00 0.00 3.21
4724 6116 4.082665 ACTCATAGGATTCTGCCATGTG 57.917 45.455 0.00 0.00 0.00 3.21
4725 6117 3.181447 ACTCATAGGATTCTGCCATGTGG 60.181 47.826 0.00 0.00 38.53 4.17
4739 6131 4.376340 CCATGTGGCCTTCTAATTGAAC 57.624 45.455 3.32 0.00 0.00 3.18
4740 6132 3.131046 CCATGTGGCCTTCTAATTGAACC 59.869 47.826 3.32 0.00 0.00 3.62
4741 6133 2.802719 TGTGGCCTTCTAATTGAACCC 58.197 47.619 3.32 0.00 0.00 4.11
4742 6134 2.100197 GTGGCCTTCTAATTGAACCCC 58.900 52.381 3.32 0.00 0.00 4.95
4743 6135 1.006639 TGGCCTTCTAATTGAACCCCC 59.993 52.381 3.32 0.00 0.00 5.40
4744 6136 1.006639 GGCCTTCTAATTGAACCCCCA 59.993 52.381 0.00 0.00 0.00 4.96
4745 6137 2.558800 GGCCTTCTAATTGAACCCCCAA 60.559 50.000 0.00 0.00 0.00 4.12
4746 6138 2.496070 GCCTTCTAATTGAACCCCCAAC 59.504 50.000 0.00 0.00 0.00 3.77
4747 6139 3.817931 GCCTTCTAATTGAACCCCCAACT 60.818 47.826 0.00 0.00 0.00 3.16
4748 6140 4.017126 CCTTCTAATTGAACCCCCAACTC 58.983 47.826 0.00 0.00 0.00 3.01
4749 6141 4.263949 CCTTCTAATTGAACCCCCAACTCT 60.264 45.833 0.00 0.00 0.00 3.24
4750 6142 5.045140 CCTTCTAATTGAACCCCCAACTCTA 60.045 44.000 0.00 0.00 0.00 2.43
4751 6143 5.431179 TCTAATTGAACCCCCAACTCTAC 57.569 43.478 0.00 0.00 0.00 2.59
4752 6144 3.451402 AATTGAACCCCCAACTCTACC 57.549 47.619 0.00 0.00 0.00 3.18
4753 6145 1.822425 TTGAACCCCCAACTCTACCA 58.178 50.000 0.00 0.00 0.00 3.25
4754 6146 2.053747 TGAACCCCCAACTCTACCAT 57.946 50.000 0.00 0.00 0.00 3.55
4755 6147 1.913419 TGAACCCCCAACTCTACCATC 59.087 52.381 0.00 0.00 0.00 3.51
4756 6148 2.197465 GAACCCCCAACTCTACCATCT 58.803 52.381 0.00 0.00 0.00 2.90
4757 6149 1.880941 ACCCCCAACTCTACCATCTC 58.119 55.000 0.00 0.00 0.00 2.75
4758 6150 1.080498 ACCCCCAACTCTACCATCTCA 59.920 52.381 0.00 0.00 0.00 3.27
4759 6151 2.293856 ACCCCCAACTCTACCATCTCAT 60.294 50.000 0.00 0.00 0.00 2.90
4760 6152 2.105477 CCCCCAACTCTACCATCTCATG 59.895 54.545 0.00 0.00 0.00 3.07
4761 6153 2.774234 CCCCAACTCTACCATCTCATGT 59.226 50.000 0.00 0.00 0.00 3.21
4762 6154 3.432749 CCCCAACTCTACCATCTCATGTG 60.433 52.174 0.00 0.00 0.00 3.21
4763 6155 3.198635 CCCAACTCTACCATCTCATGTGT 59.801 47.826 0.00 0.00 0.00 3.72
4764 6156 4.323792 CCCAACTCTACCATCTCATGTGTT 60.324 45.833 0.00 0.00 0.00 3.32
4765 6157 4.872691 CCAACTCTACCATCTCATGTGTTC 59.127 45.833 0.00 0.00 0.00 3.18
4766 6158 5.337894 CCAACTCTACCATCTCATGTGTTCT 60.338 44.000 0.00 0.00 0.00 3.01
4767 6159 6.127338 CCAACTCTACCATCTCATGTGTTCTA 60.127 42.308 0.00 0.00 0.00 2.10
4768 6160 6.707440 ACTCTACCATCTCATGTGTTCTAG 57.293 41.667 0.00 0.00 0.00 2.43
4769 6161 6.427441 ACTCTACCATCTCATGTGTTCTAGA 58.573 40.000 0.00 0.00 0.00 2.43
4770 6162 6.892456 ACTCTACCATCTCATGTGTTCTAGAA 59.108 38.462 0.00 0.00 0.00 2.10
4771 6163 7.068103 ACTCTACCATCTCATGTGTTCTAGAAG 59.932 40.741 5.12 0.00 0.00 2.85
4772 6164 4.764172 ACCATCTCATGTGTTCTAGAAGC 58.236 43.478 5.12 2.75 0.00 3.86
4773 6165 4.223700 ACCATCTCATGTGTTCTAGAAGCA 59.776 41.667 5.12 8.67 0.00 3.91
4774 6166 5.104610 ACCATCTCATGTGTTCTAGAAGCAT 60.105 40.000 5.12 10.60 0.00 3.79
4775 6167 5.466058 CCATCTCATGTGTTCTAGAAGCATC 59.534 44.000 15.65 2.53 0.00 3.91
4776 6168 5.929058 TCTCATGTGTTCTAGAAGCATCT 57.071 39.130 15.65 0.00 39.82 2.90
4777 6169 7.432059 CATCTCATGTGTTCTAGAAGCATCTA 58.568 38.462 15.65 0.00 37.10 1.98
4778 6170 7.594351 TCTCATGTGTTCTAGAAGCATCTAT 57.406 36.000 15.65 7.51 37.52 1.98
4779 6171 7.656412 TCTCATGTGTTCTAGAAGCATCTATC 58.344 38.462 15.65 0.37 37.52 2.08
4780 6172 6.442112 TCATGTGTTCTAGAAGCATCTATCG 58.558 40.000 15.65 7.99 37.52 2.92
4781 6173 6.263168 TCATGTGTTCTAGAAGCATCTATCGA 59.737 38.462 15.65 9.58 37.52 3.59
4782 6174 5.822278 TGTGTTCTAGAAGCATCTATCGAC 58.178 41.667 5.12 0.33 37.52 4.20
4783 6175 5.357032 TGTGTTCTAGAAGCATCTATCGACA 59.643 40.000 5.12 2.77 37.52 4.35
4784 6176 6.039829 TGTGTTCTAGAAGCATCTATCGACAT 59.960 38.462 5.12 0.00 37.52 3.06
4785 6177 6.362016 GTGTTCTAGAAGCATCTATCGACATG 59.638 42.308 5.12 0.00 37.52 3.21
4786 6178 5.053140 TCTAGAAGCATCTATCGACATGC 57.947 43.478 14.98 14.98 44.96 4.06
4793 6185 5.699438 GCATCTATCGACATGCTTATCTG 57.301 43.478 15.35 0.00 41.93 2.90
4794 6186 5.405797 GCATCTATCGACATGCTTATCTGA 58.594 41.667 15.35 0.00 41.93 3.27
4795 6187 6.041511 GCATCTATCGACATGCTTATCTGAT 58.958 40.000 15.35 0.00 41.93 2.90
4796 6188 7.199078 GCATCTATCGACATGCTTATCTGATA 58.801 38.462 15.35 0.00 41.93 2.15
4797 6189 7.167302 GCATCTATCGACATGCTTATCTGATAC 59.833 40.741 15.35 0.00 41.93 2.24
4798 6190 7.929941 TCTATCGACATGCTTATCTGATACT 57.070 36.000 0.00 0.00 0.00 2.12
4799 6191 7.980062 TCTATCGACATGCTTATCTGATACTC 58.020 38.462 0.00 0.00 0.00 2.59
4800 6192 6.832520 ATCGACATGCTTATCTGATACTCT 57.167 37.500 0.00 0.00 0.00 3.24
4801 6193 7.929941 ATCGACATGCTTATCTGATACTCTA 57.070 36.000 0.00 0.00 0.00 2.43
4802 6194 7.745620 TCGACATGCTTATCTGATACTCTAA 57.254 36.000 0.00 0.00 0.00 2.10
4803 6195 8.341892 TCGACATGCTTATCTGATACTCTAAT 57.658 34.615 0.00 0.00 0.00 1.73
4804 6196 9.449719 TCGACATGCTTATCTGATACTCTAATA 57.550 33.333 0.00 0.00 0.00 0.98
4826 6218 8.581253 AATAAAAAGGGACTAGAACAATCTGG 57.419 34.615 0.00 0.00 38.49 3.86
4827 6219 5.843019 AAAAGGGACTAGAACAATCTGGA 57.157 39.130 0.00 0.00 38.49 3.86
4828 6220 6.394345 AAAAGGGACTAGAACAATCTGGAT 57.606 37.500 0.00 0.00 38.49 3.41
4829 6221 6.394345 AAAGGGACTAGAACAATCTGGATT 57.606 37.500 0.00 0.00 38.49 3.01
4830 6222 5.622346 AGGGACTAGAACAATCTGGATTC 57.378 43.478 0.00 0.00 37.58 2.52
4831 6223 5.284582 AGGGACTAGAACAATCTGGATTCT 58.715 41.667 0.00 0.00 37.58 2.40
4832 6224 6.444704 AGGGACTAGAACAATCTGGATTCTA 58.555 40.000 0.00 0.00 37.58 2.10
4838 6230 6.729690 AGAACAATCTGGATTCTAGAGAGG 57.270 41.667 5.92 0.93 33.59 3.69
4839 6231 6.201591 AGAACAATCTGGATTCTAGAGAGGT 58.798 40.000 5.92 0.00 33.59 3.85
4840 6232 7.358263 AGAACAATCTGGATTCTAGAGAGGTA 58.642 38.462 5.92 0.00 33.59 3.08
4841 6233 7.841729 AGAACAATCTGGATTCTAGAGAGGTAA 59.158 37.037 5.92 0.00 33.59 2.85
4842 6234 7.595819 ACAATCTGGATTCTAGAGAGGTAAG 57.404 40.000 5.92 0.00 0.00 2.34
4843 6235 7.358263 ACAATCTGGATTCTAGAGAGGTAAGA 58.642 38.462 5.92 0.00 0.00 2.10
4844 6236 7.841729 ACAATCTGGATTCTAGAGAGGTAAGAA 59.158 37.037 5.92 0.00 34.00 2.52
4845 6237 7.833285 ATCTGGATTCTAGAGAGGTAAGAAC 57.167 40.000 5.92 0.00 32.38 3.01
4862 6254 3.756117 AGAACCAACTTGGATCTTGTCC 58.244 45.455 15.14 0.00 45.92 4.02
4876 6268 6.856895 GGATCTTGTCCAAAACAATTCTAGG 58.143 40.000 0.00 0.00 46.53 3.02
4877 6269 6.659242 GGATCTTGTCCAAAACAATTCTAGGA 59.341 38.462 0.00 0.00 46.53 2.94
4878 6270 7.176690 GGATCTTGTCCAAAACAATTCTAGGAA 59.823 37.037 0.00 0.00 46.53 3.36
4879 6271 7.889873 TCTTGTCCAAAACAATTCTAGGAAA 57.110 32.000 0.00 0.00 46.53 3.13
4880 6272 7.940850 TCTTGTCCAAAACAATTCTAGGAAAG 58.059 34.615 0.00 0.00 46.53 2.62
4881 6273 6.648879 TGTCCAAAACAATTCTAGGAAAGG 57.351 37.500 0.00 0.00 34.03 3.11
4882 6274 6.369629 TGTCCAAAACAATTCTAGGAAAGGA 58.630 36.000 0.00 0.00 34.03 3.36
4883 6275 6.836527 TGTCCAAAACAATTCTAGGAAAGGAA 59.163 34.615 0.00 0.00 34.03 3.36
4884 6276 7.014230 TGTCCAAAACAATTCTAGGAAAGGAAG 59.986 37.037 0.00 0.00 34.03 3.46
4885 6277 7.014326 GTCCAAAACAATTCTAGGAAAGGAAGT 59.986 37.037 0.00 0.00 0.00 3.01
4886 6278 8.221944 TCCAAAACAATTCTAGGAAAGGAAGTA 58.778 33.333 0.00 0.00 0.00 2.24
4887 6279 8.297426 CCAAAACAATTCTAGGAAAGGAAGTAC 58.703 37.037 0.00 0.00 0.00 2.73
4888 6280 8.846211 CAAAACAATTCTAGGAAAGGAAGTACA 58.154 33.333 0.00 0.00 0.00 2.90
4889 6281 9.588096 AAAACAATTCTAGGAAAGGAAGTACAT 57.412 29.630 0.00 0.00 0.00 2.29
4911 6303 8.891671 ACATATTCAAATGTATTTTCCCATGC 57.108 30.769 0.00 0.00 38.31 4.06
4912 6304 8.707449 ACATATTCAAATGTATTTTCCCATGCT 58.293 29.630 0.00 0.00 38.31 3.79
4913 6305 9.550406 CATATTCAAATGTATTTTCCCATGCTT 57.450 29.630 0.00 0.00 0.00 3.91
4915 6307 8.866970 ATTCAAATGTATTTTCCCATGCTTTT 57.133 26.923 0.00 0.00 0.00 2.27
4916 6308 8.688747 TTCAAATGTATTTTCCCATGCTTTTT 57.311 26.923 0.00 0.00 0.00 1.94
4917 6309 9.784531 TTCAAATGTATTTTCCCATGCTTTTTA 57.215 25.926 0.00 0.00 0.00 1.52
4918 6310 9.956640 TCAAATGTATTTTCCCATGCTTTTTAT 57.043 25.926 0.00 0.00 0.00 1.40
4942 6334 6.869421 ATACATTTAAATGACGTGCAAAGC 57.131 33.333 30.18 0.00 39.67 3.51
4943 6335 4.615949 ACATTTAAATGACGTGCAAAGCA 58.384 34.783 30.18 0.00 39.67 3.91
4944 6336 4.444056 ACATTTAAATGACGTGCAAAGCAC 59.556 37.500 30.18 11.86 45.66 4.40
4956 6348 4.822036 TGCAAAGCACGTACAATTTACT 57.178 36.364 0.00 0.00 31.71 2.24
4957 6349 5.926214 TGCAAAGCACGTACAATTTACTA 57.074 34.783 0.00 0.00 31.71 1.82
4958 6350 5.922546 TGCAAAGCACGTACAATTTACTAG 58.077 37.500 0.00 0.00 31.71 2.57
4959 6351 5.467399 TGCAAAGCACGTACAATTTACTAGT 59.533 36.000 0.00 0.00 31.71 2.57
4960 6352 6.013689 GCAAAGCACGTACAATTTACTAGTC 58.986 40.000 0.00 0.00 0.00 2.59
4961 6353 6.347079 GCAAAGCACGTACAATTTACTAGTCA 60.347 38.462 0.00 0.00 0.00 3.41
4962 6354 7.569297 CAAAGCACGTACAATTTACTAGTCAA 58.431 34.615 0.00 0.00 0.00 3.18
4963 6355 7.718272 AAGCACGTACAATTTACTAGTCAAA 57.282 32.000 0.00 0.00 0.00 2.69
4964 6356 7.900782 AGCACGTACAATTTACTAGTCAAAT 57.099 32.000 0.00 1.78 0.00 2.32
4965 6357 7.960793 AGCACGTACAATTTACTAGTCAAATC 58.039 34.615 0.00 0.00 0.00 2.17
4966 6358 7.601130 AGCACGTACAATTTACTAGTCAAATCA 59.399 33.333 0.00 0.00 0.00 2.57
4967 6359 7.898309 GCACGTACAATTTACTAGTCAAATCAG 59.102 37.037 0.00 4.29 0.00 2.90
4968 6360 8.922676 CACGTACAATTTACTAGTCAAATCAGT 58.077 33.333 0.00 9.02 0.00 3.41
4978 6370 7.962995 ACTAGTCAAATCAGTATCTCAAGGA 57.037 36.000 0.00 0.00 0.00 3.36
4979 6371 8.367660 ACTAGTCAAATCAGTATCTCAAGGAA 57.632 34.615 0.00 0.00 0.00 3.36
4980 6372 8.474025 ACTAGTCAAATCAGTATCTCAAGGAAG 58.526 37.037 0.00 0.00 0.00 3.46
4981 6373 7.487822 AGTCAAATCAGTATCTCAAGGAAGA 57.512 36.000 0.00 0.00 0.00 2.87
4982 6374 8.088463 AGTCAAATCAGTATCTCAAGGAAGAT 57.912 34.615 0.00 0.00 39.35 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.008538 GGCACAAACAGTCAAGCGG 60.009 57.895 0.00 0.00 0.00 5.52
1 2 1.369209 CGGCACAAACAGTCAAGCG 60.369 57.895 0.00 0.00 0.00 4.68
2 3 1.658409 GCGGCACAAACAGTCAAGC 60.658 57.895 0.00 0.00 0.00 4.01
3 4 1.369209 CGCGGCACAAACAGTCAAG 60.369 57.895 0.00 0.00 0.00 3.02
4 5 2.712539 CGCGGCACAAACAGTCAA 59.287 55.556 0.00 0.00 0.00 3.18
5 6 3.947841 GCGCGGCACAAACAGTCA 61.948 61.111 8.83 0.00 0.00 3.41
32 33 1.152419 TGGTGTGAACTCCTCCGGA 60.152 57.895 2.93 2.93 0.00 5.14
110 133 3.439540 CGTGCCATTCCAACCCGG 61.440 66.667 0.00 0.00 0.00 5.73
125 148 1.069765 CAGTCAACAGTGGCTCCGT 59.930 57.895 0.00 0.00 37.72 4.69
127 150 0.886490 CCACAGTCAACAGTGGCTCC 60.886 60.000 11.19 0.00 44.59 4.70
129 152 4.885426 CCACAGTCAACAGTGGCT 57.115 55.556 11.19 0.00 44.59 4.75
132 155 1.643292 CGCACCACAGTCAACAGTG 59.357 57.895 0.00 0.00 33.78 3.66
133 156 1.523711 CCGCACCACAGTCAACAGT 60.524 57.895 0.00 0.00 0.00 3.55
134 157 1.523711 ACCGCACCACAGTCAACAG 60.524 57.895 0.00 0.00 0.00 3.16
135 158 1.817520 CACCGCACCACAGTCAACA 60.818 57.895 0.00 0.00 0.00 3.33
137 160 2.203139 CCACCGCACCACAGTCAA 60.203 61.111 0.00 0.00 0.00 3.18
138 161 3.157949 TCCACCGCACCACAGTCA 61.158 61.111 0.00 0.00 0.00 3.41
139 162 2.665185 GTCCACCGCACCACAGTC 60.665 66.667 0.00 0.00 0.00 3.51
140 163 3.161450 AGTCCACCGCACCACAGT 61.161 61.111 0.00 0.00 0.00 3.55
141 164 2.666190 CAGTCCACCGCACCACAG 60.666 66.667 0.00 0.00 0.00 3.66
142 165 3.475494 ACAGTCCACCGCACCACA 61.475 61.111 0.00 0.00 0.00 4.17
143 166 2.972505 CACAGTCCACCGCACCAC 60.973 66.667 0.00 0.00 0.00 4.16
144 167 4.927782 GCACAGTCCACCGCACCA 62.928 66.667 0.00 0.00 0.00 4.17
145 168 4.927782 TGCACAGTCCACCGCACC 62.928 66.667 0.00 0.00 0.00 5.01
146 169 2.899838 TTGCACAGTCCACCGCAC 60.900 61.111 0.00 0.00 33.29 5.34
149 172 3.333414 CTGTTGCACAGTCCACCG 58.667 61.111 7.80 0.00 41.19 4.94
158 181 2.896801 CTGCCGTGGACTGTTGCAC 61.897 63.158 0.00 0.00 40.58 4.57
159 182 2.034048 TACTGCCGTGGACTGTTGCA 62.034 55.000 0.00 0.00 0.00 4.08
160 183 1.291877 CTACTGCCGTGGACTGTTGC 61.292 60.000 0.00 0.00 0.00 4.17
162 185 1.004918 GCTACTGCCGTGGACTGTT 60.005 57.895 0.00 0.00 0.00 3.16
163 186 1.754380 TTGCTACTGCCGTGGACTGT 61.754 55.000 0.00 0.00 38.71 3.55
164 187 1.005037 TTGCTACTGCCGTGGACTG 60.005 57.895 0.00 0.00 38.71 3.51
172 195 1.544724 TTGGATTGGTTGCTACTGCC 58.455 50.000 0.00 0.00 38.71 4.85
181 204 0.251564 TGGCGTGGATTGGATTGGTT 60.252 50.000 0.00 0.00 0.00 3.67
182 205 0.965363 GTGGCGTGGATTGGATTGGT 60.965 55.000 0.00 0.00 0.00 3.67
185 208 1.750778 GAATGTGGCGTGGATTGGATT 59.249 47.619 0.00 0.00 0.00 3.01
186 209 1.392589 GAATGTGGCGTGGATTGGAT 58.607 50.000 0.00 0.00 0.00 3.41
187 210 0.679640 GGAATGTGGCGTGGATTGGA 60.680 55.000 0.00 0.00 0.00 3.53
189 212 0.171007 GTGGAATGTGGCGTGGATTG 59.829 55.000 0.00 0.00 0.00 2.67
190 213 0.038166 AGTGGAATGTGGCGTGGATT 59.962 50.000 0.00 0.00 0.00 3.01
191 214 0.392998 GAGTGGAATGTGGCGTGGAT 60.393 55.000 0.00 0.00 0.00 3.41
192 215 1.003839 GAGTGGAATGTGGCGTGGA 60.004 57.895 0.00 0.00 0.00 4.02
194 217 0.238289 GTTGAGTGGAATGTGGCGTG 59.762 55.000 0.00 0.00 0.00 5.34
195 218 0.108585 AGTTGAGTGGAATGTGGCGT 59.891 50.000 0.00 0.00 0.00 5.68
196 219 0.798776 GAGTTGAGTGGAATGTGGCG 59.201 55.000 0.00 0.00 0.00 5.69
197 220 1.168714 GGAGTTGAGTGGAATGTGGC 58.831 55.000 0.00 0.00 0.00 5.01
198 221 1.442769 CGGAGTTGAGTGGAATGTGG 58.557 55.000 0.00 0.00 0.00 4.17
199 222 0.798776 GCGGAGTTGAGTGGAATGTG 59.201 55.000 0.00 0.00 0.00 3.21
200 223 0.670546 CGCGGAGTTGAGTGGAATGT 60.671 55.000 0.00 0.00 0.00 2.71
201 224 0.670546 ACGCGGAGTTGAGTGGAATG 60.671 55.000 12.47 0.00 0.00 2.67
202 225 0.389948 GACGCGGAGTTGAGTGGAAT 60.390 55.000 12.47 0.00 0.00 3.01
203 226 1.006571 GACGCGGAGTTGAGTGGAA 60.007 57.895 12.47 0.00 0.00 3.53
204 227 1.740332 TTGACGCGGAGTTGAGTGGA 61.740 55.000 12.47 0.00 0.00 4.02
205 228 1.284982 CTTGACGCGGAGTTGAGTGG 61.285 60.000 12.47 0.00 0.00 4.00
206 229 1.284982 CCTTGACGCGGAGTTGAGTG 61.285 60.000 12.47 0.00 0.00 3.51
209 232 0.105224 TTTCCTTGACGCGGAGTTGA 59.895 50.000 12.47 0.00 0.00 3.18
221 244 6.095160 AGTGGAGTACGTACTAGATTTCCTTG 59.905 42.308 27.44 0.00 36.50 3.61
224 247 6.765512 AGTAGTGGAGTACGTACTAGATTTCC 59.234 42.308 27.44 21.99 36.50 3.13
225 248 7.629130 CAGTAGTGGAGTACGTACTAGATTTC 58.371 42.308 27.44 14.13 36.50 2.17
226 249 6.038050 GCAGTAGTGGAGTACGTACTAGATTT 59.962 42.308 27.44 14.50 36.50 2.17
229 252 4.437239 GCAGTAGTGGAGTACGTACTAGA 58.563 47.826 27.44 14.36 36.50 2.43
231 254 3.055167 TGGCAGTAGTGGAGTACGTACTA 60.055 47.826 27.44 11.15 36.50 1.82
232 255 2.290514 TGGCAGTAGTGGAGTACGTACT 60.291 50.000 27.71 27.71 39.71 2.73
233 256 2.086869 TGGCAGTAGTGGAGTACGTAC 58.913 52.381 18.10 18.10 0.00 3.67
234 257 2.086869 GTGGCAGTAGTGGAGTACGTA 58.913 52.381 0.00 0.00 0.00 3.57
235 258 0.886563 GTGGCAGTAGTGGAGTACGT 59.113 55.000 0.00 0.00 0.00 3.57
236 259 0.885879 TGTGGCAGTAGTGGAGTACG 59.114 55.000 0.00 0.00 0.00 3.67
238 261 2.038033 GGTTTGTGGCAGTAGTGGAGTA 59.962 50.000 0.00 0.00 0.00 2.59
241 264 0.840617 TGGTTTGTGGCAGTAGTGGA 59.159 50.000 0.00 0.00 0.00 4.02
242 265 0.951558 GTGGTTTGTGGCAGTAGTGG 59.048 55.000 0.00 0.00 0.00 4.00
243 266 0.586319 CGTGGTTTGTGGCAGTAGTG 59.414 55.000 0.00 0.00 0.00 2.74
244 267 0.466543 TCGTGGTTTGTGGCAGTAGT 59.533 50.000 0.00 0.00 0.00 2.73
246 269 0.876777 CGTCGTGGTTTGTGGCAGTA 60.877 55.000 0.00 0.00 0.00 2.74
247 270 2.177580 CGTCGTGGTTTGTGGCAGT 61.178 57.895 0.00 0.00 0.00 4.40
248 271 2.631428 CGTCGTGGTTTGTGGCAG 59.369 61.111 0.00 0.00 0.00 4.85
250 273 3.114647 TTGCGTCGTGGTTTGTGGC 62.115 57.895 0.00 0.00 0.00 5.01
251 274 1.298041 GTTGCGTCGTGGTTTGTGG 60.298 57.895 0.00 0.00 0.00 4.17
252 275 0.588730 CAGTTGCGTCGTGGTTTGTG 60.589 55.000 0.00 0.00 0.00 3.33
253 276 1.719117 CAGTTGCGTCGTGGTTTGT 59.281 52.632 0.00 0.00 0.00 2.83
279 745 2.918230 GATAGTGGGGGCCGTTGACG 62.918 65.000 0.00 0.00 39.44 4.35
280 746 1.153229 GATAGTGGGGGCCGTTGAC 60.153 63.158 0.00 0.00 0.00 3.18
281 747 2.372074 GGATAGTGGGGGCCGTTGA 61.372 63.158 0.00 0.00 0.00 3.18
282 748 1.994885 ATGGATAGTGGGGGCCGTTG 61.995 60.000 0.00 0.00 0.00 4.10
283 749 1.696314 ATGGATAGTGGGGGCCGTT 60.696 57.895 0.00 0.00 0.00 4.44
284 750 2.039831 ATGGATAGTGGGGGCCGT 60.040 61.111 0.00 0.00 0.00 5.68
285 751 2.750350 GATGGATAGTGGGGGCCG 59.250 66.667 0.00 0.00 0.00 6.13
286 752 1.774217 TGGATGGATAGTGGGGGCC 60.774 63.158 0.00 0.00 0.00 5.80
287 753 1.456287 GTGGATGGATAGTGGGGGC 59.544 63.158 0.00 0.00 0.00 5.80
288 754 0.401979 AGGTGGATGGATAGTGGGGG 60.402 60.000 0.00 0.00 0.00 5.40
289 755 1.059913 GAGGTGGATGGATAGTGGGG 58.940 60.000 0.00 0.00 0.00 4.96
290 756 0.681733 CGAGGTGGATGGATAGTGGG 59.318 60.000 0.00 0.00 0.00 4.61
291 757 1.341531 GTCGAGGTGGATGGATAGTGG 59.658 57.143 0.00 0.00 0.00 4.00
292 758 1.341531 GGTCGAGGTGGATGGATAGTG 59.658 57.143 0.00 0.00 0.00 2.74
293 759 1.705873 GGTCGAGGTGGATGGATAGT 58.294 55.000 0.00 0.00 0.00 2.12
294 760 0.598562 CGGTCGAGGTGGATGGATAG 59.401 60.000 0.00 0.00 0.00 2.08
295 761 0.184211 TCGGTCGAGGTGGATGGATA 59.816 55.000 0.00 0.00 0.00 2.59
296 762 0.686441 TTCGGTCGAGGTGGATGGAT 60.686 55.000 0.00 0.00 0.00 3.41
297 763 1.304630 TTCGGTCGAGGTGGATGGA 60.305 57.895 0.00 0.00 0.00 3.41
298 764 1.153628 GTTCGGTCGAGGTGGATGG 60.154 63.158 0.00 0.00 0.00 3.51
299 765 1.516386 CGTTCGGTCGAGGTGGATG 60.516 63.158 0.00 0.00 0.00 3.51
300 766 1.530013 AACGTTCGGTCGAGGTGGAT 61.530 55.000 0.00 0.00 34.70 3.41
301 767 0.888736 TAACGTTCGGTCGAGGTGGA 60.889 55.000 2.82 0.00 34.70 4.02
302 768 0.171903 ATAACGTTCGGTCGAGGTGG 59.828 55.000 2.82 0.00 34.70 4.61
303 769 1.542544 GATAACGTTCGGTCGAGGTG 58.457 55.000 2.82 0.00 34.70 4.00
304 770 0.453390 GGATAACGTTCGGTCGAGGT 59.547 55.000 2.82 0.00 34.70 3.85
305 771 0.248784 GGGATAACGTTCGGTCGAGG 60.249 60.000 2.82 0.00 34.70 4.63
306 772 0.248784 GGGGATAACGTTCGGTCGAG 60.249 60.000 2.82 0.00 34.70 4.04
307 773 1.666209 GGGGGATAACGTTCGGTCGA 61.666 60.000 2.82 0.00 34.70 4.20
308 774 1.227060 GGGGGATAACGTTCGGTCG 60.227 63.158 2.82 0.00 0.00 4.79
309 775 1.227060 CGGGGGATAACGTTCGGTC 60.227 63.158 2.82 1.62 0.00 4.79
310 776 2.894919 CGGGGGATAACGTTCGGT 59.105 61.111 2.82 0.00 0.00 4.69
311 777 2.586914 GCGGGGGATAACGTTCGG 60.587 66.667 2.82 0.00 0.00 4.30
312 778 2.586914 GGCGGGGGATAACGTTCG 60.587 66.667 2.82 1.64 0.00 3.95
313 779 2.586914 CGGCGGGGGATAACGTTC 60.587 66.667 2.82 0.00 0.00 3.95
314 780 4.843719 GCGGCGGGGGATAACGTT 62.844 66.667 9.78 5.88 0.00 3.99
1341 1847 1.222115 GCACAACACTGACGACCTCC 61.222 60.000 0.00 0.00 0.00 4.30
1494 2000 8.565896 TCAGTGCAATTAACTAGTCAATGAAT 57.434 30.769 7.44 0.00 0.00 2.57
1505 2018 9.362539 GAATTGAATTCATCAGTGCAATTAACT 57.637 29.630 9.40 0.00 39.77 2.24
1562 2078 1.132036 AGGTTTCTCCCCTCTCCCTTT 60.132 52.381 0.00 0.00 36.75 3.11
1569 2085 4.846168 ATAGTTGAAGGTTTCTCCCCTC 57.154 45.455 0.00 0.00 36.75 4.30
1616 2132 8.964772 AGATACACTAGTAAGTCGTGGTTAATT 58.035 33.333 0.00 0.00 31.97 1.40
1619 2135 6.881065 ACAGATACACTAGTAAGTCGTGGTTA 59.119 38.462 0.00 0.00 31.97 2.85
1620 2136 5.709164 ACAGATACACTAGTAAGTCGTGGTT 59.291 40.000 0.00 0.00 31.97 3.67
1621 2137 5.251764 ACAGATACACTAGTAAGTCGTGGT 58.748 41.667 0.00 0.00 31.97 4.16
1622 2138 5.814764 ACAGATACACTAGTAAGTCGTGG 57.185 43.478 0.00 0.00 31.97 4.94
1623 2139 7.064371 ACACTACAGATACACTAGTAAGTCGTG 59.936 40.741 0.00 3.88 35.65 4.35
1624 2140 7.064371 CACACTACAGATACACTAGTAAGTCGT 59.936 40.741 0.00 0.00 31.97 4.34
1625 2141 7.400301 CACACTACAGATACACTAGTAAGTCG 58.600 42.308 0.00 0.00 31.97 4.18
1626 2142 7.066043 AGCACACTACAGATACACTAGTAAGTC 59.934 40.741 0.00 0.00 31.97 3.01
1627 2143 6.885376 AGCACACTACAGATACACTAGTAAGT 59.115 38.462 0.00 0.00 35.91 2.24
1628 2144 7.323049 AGCACACTACAGATACACTAGTAAG 57.677 40.000 0.00 0.00 33.13 2.34
1643 2159 1.135373 TGAAGCGAGCTAGCACACTAC 60.135 52.381 21.36 4.83 40.15 2.73
1801 2764 1.883638 GCACTCCAAATGTCAGCCTCA 60.884 52.381 0.00 0.00 0.00 3.86
1861 2824 0.106819 GAGATGCACCTGCCCAGAAT 60.107 55.000 0.00 0.00 41.18 2.40
1876 2839 1.959042 AATTGATTGAGCCGCGAGAT 58.041 45.000 8.23 0.00 0.00 2.75
1878 2841 2.549633 AAAATTGATTGAGCCGCGAG 57.450 45.000 8.23 0.00 0.00 5.03
1883 2846 5.616488 ACAATGCAAAAATTGATTGAGCC 57.384 34.783 4.82 0.00 39.46 4.70
1884 2847 9.057365 CAATAACAATGCAAAAATTGATTGAGC 57.943 29.630 4.82 0.00 39.46 4.26
1887 2850 9.549509 CCTCAATAACAATGCAAAAATTGATTG 57.450 29.630 4.82 5.60 39.46 2.67
1888 2851 8.238631 GCCTCAATAACAATGCAAAAATTGATT 58.761 29.630 4.82 0.00 39.46 2.57
1889 2852 7.390996 TGCCTCAATAACAATGCAAAAATTGAT 59.609 29.630 4.82 0.00 39.46 2.57
1891 2854 6.900189 TGCCTCAATAACAATGCAAAAATTG 58.100 32.000 0.00 0.00 42.21 2.32
1892 2855 6.935771 TCTGCCTCAATAACAATGCAAAAATT 59.064 30.769 0.00 0.00 0.00 1.82
1893 2856 6.465948 TCTGCCTCAATAACAATGCAAAAAT 58.534 32.000 0.00 0.00 0.00 1.82
1900 2863 3.066342 CAGCCTCTGCCTCAATAACAATG 59.934 47.826 0.00 0.00 38.69 2.82
1904 2867 1.673168 CCAGCCTCTGCCTCAATAAC 58.327 55.000 0.00 0.00 38.69 1.89
1912 2884 0.750911 CTCATTTCCCAGCCTCTGCC 60.751 60.000 0.00 0.00 38.69 4.85
1926 2898 9.167311 GTTCATGTTAGGATAACTGAACTCATT 57.833 33.333 21.68 0.00 36.51 2.57
1927 2899 7.770897 GGTTCATGTTAGGATAACTGAACTCAT 59.229 37.037 24.37 0.00 37.81 2.90
1931 2903 6.415573 AGGGTTCATGTTAGGATAACTGAAC 58.584 40.000 21.30 21.30 37.45 3.18
1953 2964 1.699634 TGGGAAAAGGAGACACAGAGG 59.300 52.381 0.00 0.00 0.00 3.69
1965 2976 5.989168 GGTAATCAAAACCAAGTGGGAAAAG 59.011 40.000 1.69 0.00 41.15 2.27
1967 2978 4.962995 TGGTAATCAAAACCAAGTGGGAAA 59.037 37.500 1.69 0.00 43.99 3.13
1973 2984 5.238650 CGTTCTCTGGTAATCAAAACCAAGT 59.761 40.000 0.00 0.00 46.14 3.16
1981 2992 3.447586 CCTCCTCGTTCTCTGGTAATCAA 59.552 47.826 0.00 0.00 0.00 2.57
1982 2993 3.024547 CCTCCTCGTTCTCTGGTAATCA 58.975 50.000 0.00 0.00 0.00 2.57
1983 2994 2.362717 CCCTCCTCGTTCTCTGGTAATC 59.637 54.545 0.00 0.00 0.00 1.75
1984 2995 2.292323 ACCCTCCTCGTTCTCTGGTAAT 60.292 50.000 0.00 0.00 0.00 1.89
1996 3007 4.248859 CAGCATCAAATATACCCTCCTCG 58.751 47.826 0.00 0.00 0.00 4.63
2002 3013 6.942532 TTGAGAACAGCATCAAATATACCC 57.057 37.500 0.00 0.00 32.66 3.69
2023 3034 5.362556 ACGAGAAATCAATGTGACCTTTG 57.637 39.130 0.00 0.00 0.00 2.77
2068 3079 3.017442 GACCAAGTCTTTAGCCCCATTC 58.983 50.000 0.00 0.00 0.00 2.67
2125 3136 3.146066 ACTCAAAATTTCAGCAGCCGTA 58.854 40.909 0.00 0.00 0.00 4.02
2229 3463 5.874810 TCTGCGTGCTTAAACAGATTAGATT 59.125 36.000 0.00 0.00 34.35 2.40
2249 3538 5.417754 TCTCTAATCCATGGATGATCTGC 57.582 43.478 27.97 0.00 34.70 4.26
2281 3570 1.992557 TCAAGTGGTTTATCTGGGGCT 59.007 47.619 0.00 0.00 0.00 5.19
2532 3822 4.785914 TCATCAAGGGTAATTGTCCCACTA 59.214 41.667 18.51 7.05 46.82 2.74
2547 3837 2.648059 CCAGCCCTTAGTTCATCAAGG 58.352 52.381 0.00 0.00 40.93 3.61
2719 4066 4.269603 CAGAACAGAGAGAAATATGCACCG 59.730 45.833 0.00 0.00 0.00 4.94
2722 4069 9.755804 CTAATACAGAACAGAGAGAAATATGCA 57.244 33.333 0.00 0.00 0.00 3.96
2748 4095 5.807011 CAGCCTTTTAGTAAATGATTGGCAC 59.193 40.000 17.86 0.00 40.18 5.01
2759 4106 1.005450 CCCCCTGCAGCCTTTTAGTAA 59.995 52.381 8.66 0.00 0.00 2.24
2776 4123 6.039382 CCTTTTTAGATATAAGTGCACACCCC 59.961 42.308 21.04 2.79 0.00 4.95
2851 4199 1.415374 ACGTGGACAAGTCGATTTCG 58.585 50.000 0.00 0.00 41.45 3.46
2865 4213 1.269936 ACCGTTCTACCAGAAACGTGG 60.270 52.381 6.85 0.00 44.01 4.94
2866 4214 2.056577 GACCGTTCTACCAGAAACGTG 58.943 52.381 6.85 1.96 35.75 4.49
2900 4248 4.380531 CTGAAACAGAAAGTGCTGGAGTA 58.619 43.478 0.00 0.00 40.20 2.59
2935 4283 3.498397 AGCCTGTTCAACAACGTAAGATG 59.502 43.478 0.00 0.00 46.71 2.90
3165 4518 8.039603 TCAACTGTTATGTACCTATGCAAAAG 57.960 34.615 0.00 0.00 0.00 2.27
3298 4651 7.500227 TCAGGAAGCAGATAATGGACTTATTTG 59.500 37.037 0.00 0.00 35.83 2.32
3369 4722 8.301720 TCTCGAACTGAATAGTAAGTTAGCAAA 58.698 33.333 0.00 0.00 36.77 3.68
3406 4759 6.482641 CCATGTCTCCAAGATGATCTGTTTAG 59.517 42.308 0.00 0.00 30.14 1.85
3429 4782 5.118729 TCTTGAAACAAAACCTCCTACCA 57.881 39.130 0.00 0.00 0.00 3.25
3450 4803 6.708054 AGAGATGACACAAATTCCCGAATATC 59.292 38.462 0.00 0.00 0.00 1.63
3456 4809 3.338249 ACAGAGATGACACAAATTCCCG 58.662 45.455 0.00 0.00 0.00 5.14
3465 4818 5.724328 TCCACAATCTAACAGAGATGACAC 58.276 41.667 0.00 0.00 44.68 3.67
3540 4895 4.069232 TCCAGGTGCTTCGCCTCG 62.069 66.667 0.00 0.00 43.13 4.63
3760 5116 8.978564 CCAAAAAGGTTAAAGCAAATTGTTTT 57.021 26.923 12.16 12.16 35.09 2.43
3793 5149 9.461312 TTGTGAGCATAAGGATTAGTAATGTTT 57.539 29.630 0.00 0.00 31.76 2.83
3833 5189 4.990543 TCAGTAGTGCTTCATTTGAACG 57.009 40.909 0.00 0.00 0.00 3.95
3853 5209 5.122512 TGCTGTAGTGAGTAAGTGAGTTC 57.877 43.478 0.00 0.00 0.00 3.01
3859 5215 5.746990 AGGAAATGCTGTAGTGAGTAAGT 57.253 39.130 0.00 0.00 0.00 2.24
4010 5370 6.358991 TGTCTCAATGCATTCATAGGAATCA 58.641 36.000 9.53 2.62 41.78 2.57
4018 5378 3.693085 GTCACCTGTCTCAATGCATTCAT 59.307 43.478 9.53 0.00 33.53 2.57
4104 5467 4.414337 AAGGATCACTTGCAGATACCTC 57.586 45.455 0.00 0.00 38.21 3.85
4298 5690 8.968242 CATTTAAGAGTGTTTTACAAGCCTTTC 58.032 33.333 0.00 0.00 0.00 2.62
4301 5693 7.817418 TCATTTAAGAGTGTTTTACAAGCCT 57.183 32.000 0.00 0.00 0.00 4.58
4344 5736 7.067372 CCTTTGTGCTATATTCATCTGGAAACA 59.933 37.037 0.00 0.00 39.39 2.83
4346 5738 7.345691 TCCTTTGTGCTATATTCATCTGGAAA 58.654 34.615 0.00 0.00 39.39 3.13
4364 5756 4.985538 TGCTTTCAGATACCTTCCTTTGT 58.014 39.130 0.00 0.00 0.00 2.83
4379 5771 5.009610 GTCCAAGTACAAAGGATTGCTTTCA 59.990 40.000 0.00 0.00 40.34 2.69
4381 5773 4.892934 TGTCCAAGTACAAAGGATTGCTTT 59.107 37.500 0.00 0.00 40.34 3.51
4386 5778 7.339466 GGATAATGTGTCCAAGTACAAAGGATT 59.661 37.037 0.00 0.00 35.76 3.01
4413 5805 6.078456 TGAAGGGGAATAGTTGTTGATGAT 57.922 37.500 0.00 0.00 0.00 2.45
4419 5811 4.998051 ACACATGAAGGGGAATAGTTGTT 58.002 39.130 0.00 0.00 0.00 2.83
4429 5821 2.029649 CAGCTCAAAACACATGAAGGGG 60.030 50.000 0.00 0.00 0.00 4.79
4510 5902 1.069823 AGATGGCTCGCCTCATAAGTG 59.930 52.381 9.65 0.00 36.94 3.16
4596 5988 5.395768 GGAGCTATTGGCCCACTATATAGTG 60.396 48.000 28.82 28.82 44.58 2.74
4597 5989 4.717280 GGAGCTATTGGCCCACTATATAGT 59.283 45.833 9.71 9.71 43.05 2.12
4598 5990 4.716784 TGGAGCTATTGGCCCACTATATAG 59.283 45.833 8.27 8.27 43.05 1.31
4599 5991 4.694512 TGGAGCTATTGGCCCACTATATA 58.305 43.478 0.00 0.00 43.05 0.86
4600 5992 3.531059 TGGAGCTATTGGCCCACTATAT 58.469 45.455 0.00 0.00 43.05 0.86
4601 5993 2.984672 TGGAGCTATTGGCCCACTATA 58.015 47.619 0.00 0.00 43.05 1.31
4602 5994 1.819753 TGGAGCTATTGGCCCACTAT 58.180 50.000 0.00 0.00 43.05 2.12
4603 5995 3.333009 TGGAGCTATTGGCCCACTA 57.667 52.632 0.00 0.00 43.05 2.74
4604 5996 4.169452 TGGAGCTATTGGCCCACT 57.831 55.556 0.00 0.00 43.05 4.00
4605 5997 4.242602 GTGGAGCTATTGGCCCAC 57.757 61.111 13.84 13.84 46.58 4.61
4606 5998 1.517238 TATGTGGAGCTATTGGCCCA 58.483 50.000 0.00 0.00 43.05 5.36
4607 5999 2.887151 ATATGTGGAGCTATTGGCCC 57.113 50.000 0.00 0.00 43.05 5.80
4608 6000 5.065218 CGATTAATATGTGGAGCTATTGGCC 59.935 44.000 0.00 0.00 43.05 5.36
4609 6001 5.643777 ACGATTAATATGTGGAGCTATTGGC 59.356 40.000 0.00 0.00 42.19 4.52
4610 6002 7.065216 CACGATTAATATGTGGAGCTATTGG 57.935 40.000 10.91 0.00 0.00 3.16
4620 6012 4.394920 GGCATACCCCACGATTAATATGTG 59.605 45.833 11.55 11.55 0.00 3.21
4621 6013 4.585879 GGCATACCCCACGATTAATATGT 58.414 43.478 0.00 0.00 0.00 2.29
4622 6014 3.621268 CGGCATACCCCACGATTAATATG 59.379 47.826 0.00 0.00 0.00 1.78
4623 6015 3.516300 TCGGCATACCCCACGATTAATAT 59.484 43.478 0.00 0.00 0.00 1.28
4624 6016 2.898612 TCGGCATACCCCACGATTAATA 59.101 45.455 0.00 0.00 0.00 0.98
4625 6017 1.695242 TCGGCATACCCCACGATTAAT 59.305 47.619 0.00 0.00 0.00 1.40
4626 6018 1.121378 TCGGCATACCCCACGATTAA 58.879 50.000 0.00 0.00 0.00 1.40
4627 6019 1.274167 GATCGGCATACCCCACGATTA 59.726 52.381 0.00 0.00 44.99 1.75
4628 6020 0.034896 GATCGGCATACCCCACGATT 59.965 55.000 0.00 0.00 44.99 3.34
4629 6021 3.885814 ATCGGCATACCCCACGAT 58.114 55.556 0.00 0.00 40.80 3.73
4630 6022 2.504274 GGATCGGCATACCCCACGA 61.504 63.158 0.00 0.00 39.85 4.35
4631 6023 2.030562 GGATCGGCATACCCCACG 59.969 66.667 0.00 0.00 0.00 4.94
4632 6024 0.818040 GTTGGATCGGCATACCCCAC 60.818 60.000 0.00 0.00 0.00 4.61
4633 6025 1.529796 GTTGGATCGGCATACCCCA 59.470 57.895 0.00 0.00 0.00 4.96
4634 6026 1.597027 CGTTGGATCGGCATACCCC 60.597 63.158 0.00 0.00 0.00 4.95
4635 6027 1.597027 CCGTTGGATCGGCATACCC 60.597 63.158 0.00 0.00 43.96 3.69
4636 6028 4.043168 CCGTTGGATCGGCATACC 57.957 61.111 0.00 0.00 43.96 2.73
4643 6035 2.159240 TCATCTCTTGACCGTTGGATCG 60.159 50.000 0.00 0.00 0.00 3.69
4644 6036 3.526931 TCATCTCTTGACCGTTGGATC 57.473 47.619 0.00 0.00 0.00 3.36
4654 6046 3.055891 TGCTCGGATTTGTCATCTCTTGA 60.056 43.478 0.00 0.00 0.00 3.02
4655 6047 3.264947 TGCTCGGATTTGTCATCTCTTG 58.735 45.455 0.00 0.00 0.00 3.02
4656 6048 3.616956 TGCTCGGATTTGTCATCTCTT 57.383 42.857 0.00 0.00 0.00 2.85
4657 6049 3.834489 ATGCTCGGATTTGTCATCTCT 57.166 42.857 0.00 0.00 0.00 3.10
4658 6050 5.698089 TGATAATGCTCGGATTTGTCATCTC 59.302 40.000 0.00 0.00 0.00 2.75
4659 6051 5.614308 TGATAATGCTCGGATTTGTCATCT 58.386 37.500 0.00 0.00 0.00 2.90
4660 6052 5.929697 TGATAATGCTCGGATTTGTCATC 57.070 39.130 0.00 0.00 0.00 2.92
4661 6053 5.413833 GGATGATAATGCTCGGATTTGTCAT 59.586 40.000 9.66 9.66 0.00 3.06
4662 6054 4.756642 GGATGATAATGCTCGGATTTGTCA 59.243 41.667 0.00 0.00 0.00 3.58
4663 6055 4.143030 CGGATGATAATGCTCGGATTTGTC 60.143 45.833 0.00 0.00 0.00 3.18
4664 6056 3.748048 CGGATGATAATGCTCGGATTTGT 59.252 43.478 0.00 0.00 0.00 2.83
4665 6057 3.748048 ACGGATGATAATGCTCGGATTTG 59.252 43.478 0.00 0.00 0.00 2.32
4666 6058 4.008074 ACGGATGATAATGCTCGGATTT 57.992 40.909 0.00 0.00 0.00 2.17
4667 6059 3.685139 ACGGATGATAATGCTCGGATT 57.315 42.857 0.00 0.00 0.00 3.01
4668 6060 3.329386 CAACGGATGATAATGCTCGGAT 58.671 45.455 0.00 0.00 0.00 4.18
4669 6061 2.547855 CCAACGGATGATAATGCTCGGA 60.548 50.000 0.00 0.00 0.00 4.55
4670 6062 1.800586 CCAACGGATGATAATGCTCGG 59.199 52.381 0.00 0.00 0.00 4.63
4671 6063 2.754472 TCCAACGGATGATAATGCTCG 58.246 47.619 0.00 0.00 0.00 5.03
4672 6064 6.428159 ACTTTATCCAACGGATGATAATGCTC 59.572 38.462 5.76 0.00 43.06 4.26
4673 6065 6.299141 ACTTTATCCAACGGATGATAATGCT 58.701 36.000 5.76 3.18 43.06 3.79
4674 6066 6.560253 ACTTTATCCAACGGATGATAATGC 57.440 37.500 5.76 0.00 43.06 3.56
4675 6067 9.450807 GAAAACTTTATCCAACGGATGATAATG 57.549 33.333 5.76 11.17 43.06 1.90
4676 6068 9.184523 TGAAAACTTTATCCAACGGATGATAAT 57.815 29.630 5.76 0.00 43.06 1.28
4677 6069 8.568676 TGAAAACTTTATCCAACGGATGATAA 57.431 30.769 5.76 0.00 43.06 1.75
4678 6070 8.455682 GTTGAAAACTTTATCCAACGGATGATA 58.544 33.333 5.76 0.00 45.32 2.15
4679 6071 7.312899 GTTGAAAACTTTATCCAACGGATGAT 58.687 34.615 5.76 0.00 45.32 2.45
4680 6072 6.674066 GTTGAAAACTTTATCCAACGGATGA 58.326 36.000 5.76 0.00 45.32 2.92
4681 6073 6.927933 GTTGAAAACTTTATCCAACGGATG 57.072 37.500 5.76 0.00 45.32 3.51
4697 6089 5.569355 TGGCAGAATCCTATGAGTTGAAAA 58.431 37.500 0.00 0.00 0.00 2.29
4698 6090 5.178096 TGGCAGAATCCTATGAGTTGAAA 57.822 39.130 0.00 0.00 0.00 2.69
4699 6091 4.842531 TGGCAGAATCCTATGAGTTGAA 57.157 40.909 0.00 0.00 0.00 2.69
4700 6092 4.164796 ACATGGCAGAATCCTATGAGTTGA 59.835 41.667 0.00 0.00 0.00 3.18
4701 6093 4.275196 CACATGGCAGAATCCTATGAGTTG 59.725 45.833 0.00 0.00 0.00 3.16
4702 6094 4.458397 CACATGGCAGAATCCTATGAGTT 58.542 43.478 0.00 0.00 0.00 3.01
4703 6095 3.181447 CCACATGGCAGAATCCTATGAGT 60.181 47.826 0.00 0.00 0.00 3.41
4704 6096 3.409570 CCACATGGCAGAATCCTATGAG 58.590 50.000 0.00 0.00 0.00 2.90
4705 6097 3.497103 CCACATGGCAGAATCCTATGA 57.503 47.619 0.00 0.00 0.00 2.15
4718 6110 3.131046 GGTTCAATTAGAAGGCCACATGG 59.869 47.826 5.01 0.00 36.78 3.66
4719 6111 3.131046 GGGTTCAATTAGAAGGCCACATG 59.869 47.826 5.01 0.00 36.78 3.21
4720 6112 3.365472 GGGTTCAATTAGAAGGCCACAT 58.635 45.455 5.01 0.00 36.78 3.21
4721 6113 2.556559 GGGGTTCAATTAGAAGGCCACA 60.557 50.000 5.01 0.00 36.78 4.17
4722 6114 2.100197 GGGGTTCAATTAGAAGGCCAC 58.900 52.381 5.01 0.00 36.78 5.01
4723 6115 1.006639 GGGGGTTCAATTAGAAGGCCA 59.993 52.381 5.01 0.00 36.78 5.36
4724 6116 1.006639 TGGGGGTTCAATTAGAAGGCC 59.993 52.381 0.00 0.00 36.78 5.19
4725 6117 2.496070 GTTGGGGGTTCAATTAGAAGGC 59.504 50.000 0.00 0.00 36.78 4.35
4726 6118 4.017126 GAGTTGGGGGTTCAATTAGAAGG 58.983 47.826 0.00 0.00 36.78 3.46
4727 6119 4.923415 AGAGTTGGGGGTTCAATTAGAAG 58.077 43.478 0.00 0.00 36.78 2.85
4728 6120 5.280830 GGTAGAGTTGGGGGTTCAATTAGAA 60.281 44.000 0.00 0.00 0.00 2.10
4729 6121 4.226620 GGTAGAGTTGGGGGTTCAATTAGA 59.773 45.833 0.00 0.00 0.00 2.10
4730 6122 4.018779 TGGTAGAGTTGGGGGTTCAATTAG 60.019 45.833 0.00 0.00 0.00 1.73
4731 6123 3.917629 TGGTAGAGTTGGGGGTTCAATTA 59.082 43.478 0.00 0.00 0.00 1.40
4732 6124 2.719705 TGGTAGAGTTGGGGGTTCAATT 59.280 45.455 0.00 0.00 0.00 2.32
4733 6125 2.354328 TGGTAGAGTTGGGGGTTCAAT 58.646 47.619 0.00 0.00 0.00 2.57
4734 6126 1.822425 TGGTAGAGTTGGGGGTTCAA 58.178 50.000 0.00 0.00 0.00 2.69
4735 6127 1.913419 GATGGTAGAGTTGGGGGTTCA 59.087 52.381 0.00 0.00 0.00 3.18
4736 6128 2.170817 GAGATGGTAGAGTTGGGGGTTC 59.829 54.545 0.00 0.00 0.00 3.62
4737 6129 2.197465 GAGATGGTAGAGTTGGGGGTT 58.803 52.381 0.00 0.00 0.00 4.11
4738 6130 1.080498 TGAGATGGTAGAGTTGGGGGT 59.920 52.381 0.00 0.00 0.00 4.95
4739 6131 1.879575 TGAGATGGTAGAGTTGGGGG 58.120 55.000 0.00 0.00 0.00 5.40
4740 6132 2.774234 ACATGAGATGGTAGAGTTGGGG 59.226 50.000 0.00 0.00 33.60 4.96
4741 6133 3.198635 ACACATGAGATGGTAGAGTTGGG 59.801 47.826 0.00 0.00 33.60 4.12
4742 6134 4.478206 ACACATGAGATGGTAGAGTTGG 57.522 45.455 0.00 0.00 33.60 3.77
4743 6135 5.728471 AGAACACATGAGATGGTAGAGTTG 58.272 41.667 0.00 0.00 33.60 3.16
4744 6136 6.892456 TCTAGAACACATGAGATGGTAGAGTT 59.108 38.462 0.00 0.00 33.60 3.01
4745 6137 6.427441 TCTAGAACACATGAGATGGTAGAGT 58.573 40.000 0.00 0.00 33.60 3.24
4746 6138 6.951062 TCTAGAACACATGAGATGGTAGAG 57.049 41.667 0.00 0.00 33.60 2.43
4747 6139 6.183360 GCTTCTAGAACACATGAGATGGTAGA 60.183 42.308 0.00 0.00 33.60 2.59
4748 6140 5.982516 GCTTCTAGAACACATGAGATGGTAG 59.017 44.000 0.00 0.00 33.60 3.18
4749 6141 5.422012 TGCTTCTAGAACACATGAGATGGTA 59.578 40.000 0.00 0.00 33.60 3.25
4750 6142 4.223700 TGCTTCTAGAACACATGAGATGGT 59.776 41.667 0.00 0.00 33.60 3.55
4751 6143 4.763073 TGCTTCTAGAACACATGAGATGG 58.237 43.478 0.00 0.00 33.60 3.51
4752 6144 6.282167 AGATGCTTCTAGAACACATGAGATG 58.718 40.000 17.10 0.10 0.00 2.90
4753 6145 6.482898 AGATGCTTCTAGAACACATGAGAT 57.517 37.500 17.10 0.00 0.00 2.75
4754 6146 5.929058 AGATGCTTCTAGAACACATGAGA 57.071 39.130 17.10 0.00 0.00 3.27
4755 6147 6.581919 CGATAGATGCTTCTAGAACACATGAG 59.418 42.308 17.10 0.00 37.86 2.90
4756 6148 6.263168 TCGATAGATGCTTCTAGAACACATGA 59.737 38.462 17.10 8.10 42.67 3.07
4757 6149 6.442112 TCGATAGATGCTTCTAGAACACATG 58.558 40.000 17.10 3.25 42.67 3.21
4758 6150 6.641169 TCGATAGATGCTTCTAGAACACAT 57.359 37.500 14.03 13.59 42.67 3.21
4773 6165 8.620416 GAGTATCAGATAAGCATGTCGATAGAT 58.380 37.037 0.00 0.00 41.69 1.98
4774 6166 7.826744 AGAGTATCAGATAAGCATGTCGATAGA 59.173 37.037 0.00 0.00 40.39 1.98
4775 6167 7.984391 AGAGTATCAGATAAGCATGTCGATAG 58.016 38.462 0.00 0.00 37.82 2.08
4776 6168 7.929941 AGAGTATCAGATAAGCATGTCGATA 57.070 36.000 0.00 0.00 37.82 2.92
4777 6169 6.832520 AGAGTATCAGATAAGCATGTCGAT 57.167 37.500 0.00 0.00 37.82 3.59
4778 6170 7.745620 TTAGAGTATCAGATAAGCATGTCGA 57.254 36.000 0.00 0.00 37.82 4.20
4800 6192 9.681062 CCAGATTGTTCTAGTCCCTTTTTATTA 57.319 33.333 0.00 0.00 0.00 0.98
4801 6193 8.390921 TCCAGATTGTTCTAGTCCCTTTTTATT 58.609 33.333 0.00 0.00 0.00 1.40
4802 6194 7.928873 TCCAGATTGTTCTAGTCCCTTTTTAT 58.071 34.615 0.00 0.00 0.00 1.40
4803 6195 7.324388 TCCAGATTGTTCTAGTCCCTTTTTA 57.676 36.000 0.00 0.00 0.00 1.52
4804 6196 6.200878 TCCAGATTGTTCTAGTCCCTTTTT 57.799 37.500 0.00 0.00 0.00 1.94
4805 6197 5.843019 TCCAGATTGTTCTAGTCCCTTTT 57.157 39.130 0.00 0.00 0.00 2.27
4806 6198 6.216456 AGAATCCAGATTGTTCTAGTCCCTTT 59.784 38.462 0.00 0.00 30.85 3.11
4807 6199 5.728741 AGAATCCAGATTGTTCTAGTCCCTT 59.271 40.000 0.00 0.00 30.85 3.95
4808 6200 5.284582 AGAATCCAGATTGTTCTAGTCCCT 58.715 41.667 0.00 0.00 30.85 4.20
4809 6201 5.622346 AGAATCCAGATTGTTCTAGTCCC 57.378 43.478 0.00 0.00 30.85 4.46
4810 6202 7.504238 TCTCTAGAATCCAGATTGTTCTAGTCC 59.496 40.741 16.49 0.00 45.82 3.85
4811 6203 8.458573 TCTCTAGAATCCAGATTGTTCTAGTC 57.541 38.462 16.49 0.00 45.82 2.59
4812 6204 7.505585 CCTCTCTAGAATCCAGATTGTTCTAGT 59.494 40.741 16.49 0.00 45.82 2.57
4813 6205 7.505585 ACCTCTCTAGAATCCAGATTGTTCTAG 59.494 40.741 12.75 12.75 46.49 2.43
4814 6206 7.358263 ACCTCTCTAGAATCCAGATTGTTCTA 58.642 38.462 0.00 0.00 34.33 2.10
4815 6207 6.201591 ACCTCTCTAGAATCCAGATTGTTCT 58.798 40.000 0.00 0.00 36.30 3.01
4816 6208 6.478512 ACCTCTCTAGAATCCAGATTGTTC 57.521 41.667 0.00 0.00 0.00 3.18
4817 6209 7.841729 TCTTACCTCTCTAGAATCCAGATTGTT 59.158 37.037 0.00 0.00 0.00 2.83
4818 6210 7.358263 TCTTACCTCTCTAGAATCCAGATTGT 58.642 38.462 0.00 0.00 0.00 2.71
4819 6211 7.831691 TCTTACCTCTCTAGAATCCAGATTG 57.168 40.000 0.00 0.00 0.00 2.67
4820 6212 7.289084 GGTTCTTACCTCTCTAGAATCCAGATT 59.711 40.741 0.00 0.00 41.53 2.40
4821 6213 6.780522 GGTTCTTACCTCTCTAGAATCCAGAT 59.219 42.308 0.00 0.00 41.53 2.90
4822 6214 6.130569 GGTTCTTACCTCTCTAGAATCCAGA 58.869 44.000 0.00 0.00 41.53 3.86
4823 6215 5.894393 TGGTTCTTACCTCTCTAGAATCCAG 59.106 44.000 0.00 0.00 45.27 3.86
4824 6216 5.838955 TGGTTCTTACCTCTCTAGAATCCA 58.161 41.667 0.00 0.00 45.27 3.41
4825 6217 6.381707 AGTTGGTTCTTACCTCTCTAGAATCC 59.618 42.308 0.00 0.00 45.27 3.01
4826 6218 7.412853 AGTTGGTTCTTACCTCTCTAGAATC 57.587 40.000 0.00 0.00 45.27 2.52
4827 6219 7.310734 CCAAGTTGGTTCTTACCTCTCTAGAAT 60.311 40.741 14.21 0.00 45.27 2.40
4828 6220 6.014499 CCAAGTTGGTTCTTACCTCTCTAGAA 60.014 42.308 14.21 0.00 45.27 2.10
4829 6221 5.480772 CCAAGTTGGTTCTTACCTCTCTAGA 59.519 44.000 14.21 0.00 45.27 2.43
4830 6222 5.480772 TCCAAGTTGGTTCTTACCTCTCTAG 59.519 44.000 21.35 0.00 45.27 2.43
4831 6223 5.399991 TCCAAGTTGGTTCTTACCTCTCTA 58.600 41.667 21.35 0.00 45.27 2.43
4832 6224 4.232091 TCCAAGTTGGTTCTTACCTCTCT 58.768 43.478 21.35 0.00 45.27 3.10
4833 6225 4.618920 TCCAAGTTGGTTCTTACCTCTC 57.381 45.455 21.35 0.00 45.27 3.20
4834 6226 4.846940 AGATCCAAGTTGGTTCTTACCTCT 59.153 41.667 24.16 11.33 42.34 3.69
4835 6227 5.167303 AGATCCAAGTTGGTTCTTACCTC 57.833 43.478 24.16 9.71 42.34 3.85
4841 6233 3.756117 GGACAAGATCCAAGTTGGTTCT 58.244 45.455 24.16 24.16 45.78 3.01
4858 6250 6.369629 TCCTTTCCTAGAATTGTTTTGGACA 58.630 36.000 0.00 0.00 36.19 4.02
4859 6251 6.894339 TCCTTTCCTAGAATTGTTTTGGAC 57.106 37.500 0.00 0.00 0.00 4.02
4860 6252 7.066781 ACTTCCTTTCCTAGAATTGTTTTGGA 58.933 34.615 0.00 0.00 0.00 3.53
4861 6253 7.290110 ACTTCCTTTCCTAGAATTGTTTTGG 57.710 36.000 0.00 0.00 0.00 3.28
4862 6254 8.846211 TGTACTTCCTTTCCTAGAATTGTTTTG 58.154 33.333 0.00 0.00 0.00 2.44
4863 6255 8.990163 TGTACTTCCTTTCCTAGAATTGTTTT 57.010 30.769 0.00 0.00 0.00 2.43
4885 6277 9.979578 GCATGGGAAAATACATTTGAATATGTA 57.020 29.630 0.00 0.00 43.15 2.29
4886 6278 8.707449 AGCATGGGAAAATACATTTGAATATGT 58.293 29.630 0.00 0.00 41.43 2.29
4887 6279 9.550406 AAGCATGGGAAAATACATTTGAATATG 57.450 29.630 0.00 0.00 0.00 1.78
4889 6281 9.956640 AAAAGCATGGGAAAATACATTTGAATA 57.043 25.926 0.00 0.00 0.00 1.75
4890 6282 8.866970 AAAAGCATGGGAAAATACATTTGAAT 57.133 26.923 0.00 0.00 0.00 2.57
4891 6283 8.688747 AAAAAGCATGGGAAAATACATTTGAA 57.311 26.923 0.00 0.00 0.00 2.69
4892 6284 9.956640 ATAAAAAGCATGGGAAAATACATTTGA 57.043 25.926 0.00 0.00 0.00 2.69
4916 6308 9.658475 GCTTTGCACGTCATTTAAATGTATATA 57.342 29.630 23.95 5.40 37.65 0.86
4917 6309 8.187480 TGCTTTGCACGTCATTTAAATGTATAT 58.813 29.630 23.95 8.96 34.03 0.86
4918 6310 7.530863 TGCTTTGCACGTCATTTAAATGTATA 58.469 30.769 23.95 6.09 34.03 1.47
4919 6311 6.385843 TGCTTTGCACGTCATTTAAATGTAT 58.614 32.000 23.95 10.78 34.03 2.29
4920 6312 5.763088 TGCTTTGCACGTCATTTAAATGTA 58.237 33.333 23.95 11.02 34.03 2.29
4921 6313 4.615949 TGCTTTGCACGTCATTTAAATGT 58.384 34.783 23.95 6.09 34.03 2.71
4935 6327 4.822036 AGTAAATTGTACGTGCTTTGCA 57.178 36.364 4.97 0.00 35.60 4.08
4936 6328 5.923665 ACTAGTAAATTGTACGTGCTTTGC 58.076 37.500 4.97 2.00 0.00 3.68
4937 6329 7.112528 TGACTAGTAAATTGTACGTGCTTTG 57.887 36.000 4.97 0.00 0.00 2.77
4938 6330 7.718272 TTGACTAGTAAATTGTACGTGCTTT 57.282 32.000 4.97 0.65 0.00 3.51
4939 6331 7.718272 TTTGACTAGTAAATTGTACGTGCTT 57.282 32.000 4.97 0.00 0.00 3.91
4940 6332 7.601130 TGATTTGACTAGTAAATTGTACGTGCT 59.399 33.333 4.97 0.00 0.00 4.40
4941 6333 7.735500 TGATTTGACTAGTAAATTGTACGTGC 58.264 34.615 0.00 0.00 0.00 5.34
4942 6334 8.922676 ACTGATTTGACTAGTAAATTGTACGTG 58.077 33.333 0.00 0.00 0.00 4.49
4952 6344 9.475620 TCCTTGAGATACTGATTTGACTAGTAA 57.524 33.333 0.00 0.00 31.40 2.24
4953 6345 9.475620 TTCCTTGAGATACTGATTTGACTAGTA 57.524 33.333 0.00 0.00 0.00 1.82
4954 6346 7.962995 TCCTTGAGATACTGATTTGACTAGT 57.037 36.000 0.00 0.00 0.00 2.57
4955 6347 8.690884 TCTTCCTTGAGATACTGATTTGACTAG 58.309 37.037 0.00 0.00 0.00 2.57
4956 6348 8.595362 TCTTCCTTGAGATACTGATTTGACTA 57.405 34.615 0.00 0.00 0.00 2.59
4957 6349 7.487822 TCTTCCTTGAGATACTGATTTGACT 57.512 36.000 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.