Multiple sequence alignment - TraesCS1A01G423100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G423100 chr1A 100.000 7856 0 0 1 7856 578515212 578523067 0.000000e+00 14508.0
1 TraesCS1A01G423100 chr1A 73.460 211 43 11 6925 7132 561375459 561375659 5.090000e-07 67.6
2 TraesCS1A01G423100 chr1A 94.737 38 2 0 81 118 578515323 578515286 8.510000e-05 60.2
3 TraesCS1A01G423100 chr1A 100.000 28 0 0 7375 7402 577263127 577263100 1.400000e-02 52.8
4 TraesCS1A01G423100 chr1B 88.641 4833 336 114 34 4748 670383252 670387989 0.000000e+00 5686.0
5 TraesCS1A01G423100 chr1B 93.420 1079 56 6 4825 5898 670387986 670389054 0.000000e+00 1585.0
6 TraesCS1A01G423100 chr1B 90.948 696 44 8 6005 6682 670389125 670389819 0.000000e+00 918.0
7 TraesCS1A01G423100 chr1B 82.439 615 72 28 5690 6290 670422197 670422789 9.100000e-139 505.0
8 TraesCS1A01G423100 chr1B 93.617 188 8 3 6686 6870 670390273 670390459 2.160000e-70 278.0
9 TraesCS1A01G423100 chr1B 87.845 181 18 3 7550 7726 652464767 652464947 7.990000e-50 209.0
10 TraesCS1A01G423100 chr1B 87.730 163 13 1 5309 5464 670422036 670422198 4.840000e-42 183.0
11 TraesCS1A01G423100 chr1D 93.897 2556 127 13 3332 5873 481695272 481697812 0.000000e+00 3829.0
12 TraesCS1A01G423100 chr1D 90.368 2907 176 58 1 2838 481691673 481694544 0.000000e+00 3722.0
13 TraesCS1A01G423100 chr1D 93.036 1321 56 15 5875 7163 481698012 481699328 0.000000e+00 1897.0
14 TraesCS1A01G423100 chr1D 91.163 679 49 9 2653 3330 481694496 481695164 0.000000e+00 911.0
15 TraesCS1A01G423100 chr1D 82.945 686 103 11 4029 4712 481816819 481817492 2.420000e-169 606.0
16 TraesCS1A01G423100 chr1D 87.449 247 18 4 4895 5141 481817490 481817723 1.000000e-68 272.0
17 TraesCS1A01G423100 chr1D 89.412 170 17 1 7543 7711 463381898 463382067 6.180000e-51 213.0
18 TraesCS1A01G423100 chr1D 90.909 121 9 2 1753 1871 481699909 481700029 2.270000e-35 161.0
19 TraesCS1A01G423100 chr1D 89.189 111 11 1 7743 7852 481699705 481699815 3.820000e-28 137.0
20 TraesCS1A01G423100 chr1D 97.778 45 1 0 7708 7752 481699639 481699683 2.350000e-10 78.7
21 TraesCS1A01G423100 chr1D 87.931 58 6 1 6925 6982 468555825 468555881 5.090000e-07 67.6
22 TraesCS1A01G423100 chr7B 90.419 167 15 1 7545 7710 11441309 11441143 1.330000e-52 219.0
23 TraesCS1A01G423100 chr7B 87.500 184 20 3 7543 7725 650608924 650609105 7.990000e-50 209.0
24 TraesCS1A01G423100 chr7B 83.333 114 12 6 1197 1304 113915780 113915892 1.800000e-16 99.0
25 TraesCS1A01G423100 chr7B 94.737 38 2 0 6919 6956 24004476 24004513 8.510000e-05 60.2
26 TraesCS1A01G423100 chr7A 89.080 174 17 2 7551 7723 224313911 224314083 1.720000e-51 215.0
27 TraesCS1A01G423100 chr7A 89.941 169 14 3 7549 7715 677696410 677696243 1.720000e-51 215.0
28 TraesCS1A01G423100 chr7A 89.189 74 8 0 6925 6998 526789820 526789747 8.390000e-15 93.5
29 TraesCS1A01G423100 chr5D 88.827 179 15 4 7545 7719 377988169 377987992 1.720000e-51 215.0
30 TraesCS1A01G423100 chr3D 90.741 162 14 1 7547 7707 87925997 87926158 1.720000e-51 215.0
31 TraesCS1A01G423100 chr3D 94.118 102 6 0 7167 7268 184589380 184589279 1.060000e-33 156.0
32 TraesCS1A01G423100 chr6B 87.432 183 19 4 7540 7719 481857840 481858021 2.870000e-49 207.0
33 TraesCS1A01G423100 chr6B 83.133 166 22 5 1201 1360 279016095 279015930 6.350000e-31 147.0
34 TraesCS1A01G423100 chr6B 95.556 90 4 0 4746 4835 512256534 512256623 2.280000e-30 145.0
35 TraesCS1A01G423100 chr6B 96.512 86 3 0 4746 4831 13827525 13827610 8.220000e-30 143.0
36 TraesCS1A01G423100 chr6B 91.837 98 7 1 4734 4831 359864731 359864635 1.380000e-27 135.0
37 TraesCS1A01G423100 chr6B 80.488 82 13 2 6901 6979 717449440 717449359 8.510000e-05 60.2
38 TraesCS1A01G423100 chr6B 80.488 82 13 2 6901 6979 717465536 717465455 8.510000e-05 60.2
39 TraesCS1A01G423100 chr5B 76.082 439 78 13 5382 5818 612068421 612068834 3.720000e-48 204.0
40 TraesCS1A01G423100 chr2D 80.443 271 43 8 2522 2787 16269715 16269450 1.730000e-46 198.0
41 TraesCS1A01G423100 chr2D 92.523 107 8 0 7162 7268 335687006 335687112 3.800000e-33 154.0
42 TraesCS1A01G423100 chr2D 91.837 98 8 0 4744 4841 382456027 382455930 3.820000e-28 137.0
43 TraesCS1A01G423100 chr3A 88.800 125 11 3 7162 7285 697447777 697447655 4.910000e-32 150.0
44 TraesCS1A01G423100 chr3A 90.741 108 9 1 7162 7268 235826493 235826386 8.220000e-30 143.0
45 TraesCS1A01G423100 chr2A 91.589 107 9 0 7162 7268 446069287 446069393 1.770000e-31 148.0
46 TraesCS1A01G423100 chr2A 90.909 99 9 0 4743 4841 377134957 377135055 4.950000e-27 134.0
47 TraesCS1A01G423100 chr2A 82.857 105 11 6 1206 1304 667022984 667022881 3.910000e-13 87.9
48 TraesCS1A01G423100 chr2A 100.000 29 0 0 1276 1304 577500543 577500515 4.000000e-03 54.7
49 TraesCS1A01G423100 chr3B 92.157 102 8 0 7167 7268 263262663 263262562 2.280000e-30 145.0
50 TraesCS1A01G423100 chr2B 90.654 107 10 0 7162 7268 403699384 403699490 8.220000e-30 143.0
51 TraesCS1A01G423100 chr2B 93.617 94 5 1 4747 4840 354879125 354879217 1.060000e-28 139.0
52 TraesCS1A01G423100 chr2B 100.000 33 0 0 6920 6952 215600043 215600075 2.370000e-05 62.1
53 TraesCS1A01G423100 chr4D 90.654 107 9 1 7162 7268 83148099 83148204 2.960000e-29 141.0
54 TraesCS1A01G423100 chr4D 94.872 39 1 1 6918 6955 6388378 6388340 8.510000e-05 60.2
55 TraesCS1A01G423100 chr4B 90.654 107 9 1 7162 7268 117778785 117778890 2.960000e-29 141.0
56 TraesCS1A01G423100 chr4B 89.623 106 5 6 4729 4833 119340137 119340237 6.400000e-26 130.0
57 TraesCS1A01G423100 chr4A 92.632 95 7 0 4739 4833 285485359 285485453 3.820000e-28 137.0
58 TraesCS1A01G423100 chr4A 88.172 93 10 1 5382 5473 616238719 616238811 8.330000e-20 110.0
59 TraesCS1A01G423100 chr7D 91.111 45 3 1 6914 6957 130403546 130403502 8.510000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G423100 chr1A 578515212 578523067 7855 False 14508.000000 14508 100.000000 1 7856 1 chr1A.!!$F2 7855
1 TraesCS1A01G423100 chr1B 670383252 670390459 7207 False 2116.750000 5686 91.656500 34 6870 4 chr1B.!!$F2 6836
2 TraesCS1A01G423100 chr1B 670422036 670422789 753 False 344.000000 505 85.084500 5309 6290 2 chr1B.!!$F3 981
3 TraesCS1A01G423100 chr1D 481691673 481700029 8356 False 1533.671429 3829 92.334286 1 7852 7 chr1D.!!$F3 7851
4 TraesCS1A01G423100 chr1D 481816819 481817723 904 False 439.000000 606 85.197000 4029 5141 2 chr1D.!!$F4 1112

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
417 443 0.032267 GTGTCCTCGGCTATGGCTAC 59.968 60.0 0.00 0.00 38.73 3.58 F
1011 1045 1.050421 CCCCCAATGGCTCATTTCCC 61.050 60.0 0.00 0.00 31.05 3.97 F
1484 1567 0.953960 GCGTTCCCTCGGTTTGATGT 60.954 55.0 0.00 0.00 0.00 3.06 F
1952 2054 0.402121 GTTTCTCTCCACCCCTTGCT 59.598 55.0 0.00 0.00 0.00 3.91 F
1963 2065 0.548031 CCCCTTGCTCTGCTCCATTA 59.452 55.0 0.00 0.00 0.00 1.90 F
3675 4039 0.036858 GACTGAACCTGACTGGCTCC 60.037 60.0 0.00 0.00 40.22 4.70 F
5165 5546 0.248377 GCGCCAGCTTCATCAATGTC 60.248 55.0 0.00 0.00 41.01 3.06 F
5420 5808 1.073177 CCGCGACAAATAGACCGTTT 58.927 50.0 8.23 0.00 0.00 3.60 F
6223 6837 1.445716 CGGTCGTCGATCTTAGGCCT 61.446 60.0 11.78 11.78 42.43 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1399 1474 0.251341 ACCGGCCAAATCAGAGCTTT 60.251 50.000 0.00 0.00 0.00 3.51 R
1933 2035 0.402121 AGCAAGGGGTGGAGAGAAAC 59.598 55.000 0.00 0.00 0.00 2.78 R
3000 3250 1.328680 GACGACGCAATGATTCTGCAT 59.671 47.619 0.00 0.00 39.91 3.96 R
3655 4019 0.681733 GAGCCAGTCAGGTTCAGTCA 59.318 55.000 0.00 0.00 46.12 3.41 R
3803 4167 4.462483 GGCTAACATTTTCTGGAACATGGA 59.538 41.667 12.23 2.14 38.20 3.41 R
5453 5841 0.593128 GCATTTGAACAGACCTGCGT 59.407 50.000 0.00 0.00 0.00 5.24 R
6223 6837 0.331616 TCAGGTCCTCCATCGTCAGA 59.668 55.000 0.00 0.00 35.89 3.27 R
6402 7019 1.001764 TCCTTCGCCGTAGAGGTCA 60.002 57.895 0.00 0.00 43.70 4.02 R
7601 8710 0.453282 CGCTCATTTTGCTCCGTGTG 60.453 55.000 0.00 0.00 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 6.084060 TCCATGAATAGATAGGTGGTCATGA 58.916 40.000 11.91 0.00 43.14 3.07
32 33 7.072328 TCCATGAATAGATAGGTGGTCATGAAA 59.928 37.037 11.91 0.00 43.14 2.69
76 77 3.596214 GGCCATGACGTTTCTTCTTAGA 58.404 45.455 0.00 0.00 0.00 2.10
79 80 3.304559 CCATGACGTTTCTTCTTAGAGCG 59.695 47.826 0.00 0.00 36.96 5.03
139 161 4.979204 CGTAGGACGCTTGGTTGA 57.021 55.556 0.00 0.00 33.65 3.18
140 162 3.436001 CGTAGGACGCTTGGTTGAT 57.564 52.632 0.00 0.00 33.65 2.57
147 169 1.398390 GACGCTTGGTTGATCATGGTC 59.602 52.381 0.00 0.00 0.00 4.02
168 190 3.942748 TCAAGTAGAAACGCCAAACTTGT 59.057 39.130 11.88 0.00 44.60 3.16
176 198 2.874849 ACGCCAAACTTGTCTTTGTTG 58.125 42.857 0.00 0.00 30.33 3.33
177 199 1.587946 CGCCAAACTTGTCTTTGTTGC 59.412 47.619 0.00 0.00 30.33 4.17
179 201 1.587946 CCAAACTTGTCTTTGTTGCGC 59.412 47.619 0.00 0.00 30.33 6.09
183 205 4.568152 AACTTGTCTTTGTTGCGCTATT 57.432 36.364 9.73 0.00 0.00 1.73
202 224 4.558538 ATTTAGCAGAAACGCCATGATC 57.441 40.909 0.00 0.00 0.00 2.92
206 228 1.202222 GCAGAAACGCCATGATCCTTG 60.202 52.381 0.00 0.00 0.00 3.61
208 230 1.004745 AGAAACGCCATGATCCTTGGT 59.995 47.619 12.09 0.00 36.57 3.67
218 240 5.393461 GCCATGATCCTTGGTGTTTCTAAAG 60.393 44.000 12.09 0.00 36.57 1.85
232 257 6.016860 GTGTTTCTAAAGGGGTTAAATCGTGT 60.017 38.462 0.00 0.00 0.00 4.49
237 262 8.098220 TCTAAAGGGGTTAAATCGTGTTAAAC 57.902 34.615 1.52 1.52 31.10 2.01
242 267 8.462589 AGGGGTTAAATCGTGTTAAACTTTTA 57.537 30.769 8.02 0.00 32.30 1.52
243 268 8.911965 AGGGGTTAAATCGTGTTAAACTTTTAA 58.088 29.630 8.02 0.00 32.30 1.52
305 331 2.086610 ACTGTGATTTTGGCCCAACT 57.913 45.000 0.00 0.00 0.00 3.16
313 339 1.955458 TTTGGCCCAACTGAAGGGGT 61.955 55.000 0.00 0.00 46.86 4.95
323 349 4.344865 GAAGGGGTTGCCTCCGCA 62.345 66.667 12.36 0.00 45.49 5.69
343 369 3.947196 GCAATGTTGAGACCCATGTATCA 59.053 43.478 0.00 0.00 40.78 2.15
354 380 1.479942 CCATGTATCAAGGGGCATGCT 60.480 52.381 18.92 0.00 37.84 3.79
377 403 4.118410 TGTTGCACATTTGTCAATGGTTC 58.882 39.130 0.00 0.00 43.82 3.62
381 407 5.366460 TGCACATTTGTCAATGGTTCAATT 58.634 33.333 0.31 0.00 43.82 2.32
417 443 0.032267 GTGTCCTCGGCTATGGCTAC 59.968 60.000 0.00 0.00 38.73 3.58
422 448 1.504647 CTCGGCTATGGCTACGACGA 61.505 60.000 0.00 0.00 38.73 4.20
423 449 1.096967 TCGGCTATGGCTACGACGAA 61.097 55.000 0.00 0.00 38.73 3.85
447 474 1.614711 CATGCCCCTTGGAGCCTAA 59.385 57.895 0.00 0.00 0.00 2.69
463 490 3.329929 CCTAACTAGGCGTCCACTTTT 57.670 47.619 0.00 0.00 36.53 2.27
508 535 1.133976 CGAGGAGGGCCATTTCATCTT 60.134 52.381 6.18 0.00 36.29 2.40
521 548 6.290605 CCATTTCATCTTCAAGGTTTGGTTT 58.709 36.000 0.00 0.00 0.00 3.27
527 554 4.282496 TCTTCAAGGTTTGGTTTTGCCTA 58.718 39.130 0.00 0.00 38.35 3.93
549 576 9.813080 GCCTATTATCTTTGTCGATGTATTTTC 57.187 33.333 0.00 0.00 0.00 2.29
553 580 6.589830 ATCTTTGTCGATGTATTTTCCTCG 57.410 37.500 0.00 0.00 0.00 4.63
568 595 1.621317 TCCTCGAGTTGCAACCATACA 59.379 47.619 25.62 5.16 0.00 2.29
596 623 3.377485 GCTACCTCTACGATGTTGAGACA 59.623 47.826 9.46 0.00 37.54 3.41
628 657 3.537580 ACTTTTAGGAGTTGCGTGTTGA 58.462 40.909 0.00 0.00 0.00 3.18
688 717 9.213799 CTATAACAAATTTGCAAGGGCTTTTTA 57.786 29.630 18.12 5.69 41.91 1.52
699 730 1.822371 GGGCTTTTTATCGGCTTTCCA 59.178 47.619 0.00 0.00 0.00 3.53
707 738 1.094785 ATCGGCTTTCCACCAATTCG 58.905 50.000 0.00 0.00 0.00 3.34
809 840 6.002062 ACATGTGTAAAGCTAACTTCTTGC 57.998 37.500 0.00 0.00 34.05 4.01
910 944 3.175438 AGCCATTGGTCTAAAAAGCCT 57.825 42.857 4.26 0.00 0.00 4.58
984 1018 2.121129 GCCGCCTATATATACCCCCAA 58.879 52.381 0.00 0.00 0.00 4.12
1011 1045 1.050421 CCCCCAATGGCTCATTTCCC 61.050 60.000 0.00 0.00 31.05 3.97
1057 1091 2.689034 CTCCCCCGCCTTCCTCTT 60.689 66.667 0.00 0.00 0.00 2.85
1078 1134 2.104111 TCTTCCTCCAAGTTCTTGCGAA 59.896 45.455 7.00 7.18 33.27 4.70
1133 1207 4.477975 GCGCGCGTCCAGACTAGT 62.478 66.667 32.35 0.00 0.00 2.57
1157 1231 4.869440 CAGAGGAGCCTGCTCGCG 62.869 72.222 12.65 0.00 43.59 5.87
1384 1459 3.357079 CTTGCCTTGCTCGCCGTT 61.357 61.111 0.00 0.00 0.00 4.44
1408 1483 3.185246 GGATTCCGATCAAAGCTCTGA 57.815 47.619 0.00 0.00 33.77 3.27
1411 1494 4.578105 GGATTCCGATCAAAGCTCTGATTT 59.422 41.667 3.55 0.00 36.15 2.17
1414 1497 2.223433 CCGATCAAAGCTCTGATTTGGC 60.223 50.000 3.55 0.00 36.15 4.52
1421 1504 1.815421 CTCTGATTTGGCCGGTCGG 60.815 63.158 0.00 4.85 38.57 4.79
1429 1512 4.941309 GGCCGGTCGGTTTGGTGT 62.941 66.667 11.25 0.00 37.65 4.16
1432 1515 1.165284 GCCGGTCGGTTTGGTGTTTA 61.165 55.000 11.25 0.00 37.65 2.01
1445 1528 2.296752 TGGTGTTTACTGATTCGACCGA 59.703 45.455 0.00 0.00 0.00 4.69
1480 1563 3.419759 CGGCGTTCCCTCGGTTTG 61.420 66.667 0.00 0.00 0.00 2.93
1481 1564 2.031465 GGCGTTCCCTCGGTTTGA 59.969 61.111 0.00 0.00 0.00 2.69
1482 1565 1.376812 GGCGTTCCCTCGGTTTGAT 60.377 57.895 0.00 0.00 0.00 2.57
1483 1566 1.644786 GGCGTTCCCTCGGTTTGATG 61.645 60.000 0.00 0.00 0.00 3.07
1484 1567 0.953960 GCGTTCCCTCGGTTTGATGT 60.954 55.000 0.00 0.00 0.00 3.06
1485 1568 1.519408 CGTTCCCTCGGTTTGATGTT 58.481 50.000 0.00 0.00 0.00 2.71
1486 1569 1.877443 CGTTCCCTCGGTTTGATGTTT 59.123 47.619 0.00 0.00 0.00 2.83
1565 1648 1.997606 CGTTACCGTCCATGTTCTTCC 59.002 52.381 0.00 0.00 0.00 3.46
1599 1682 1.234821 GCAGTTCGTTGGGTGATTCA 58.765 50.000 0.00 0.00 0.00 2.57
1634 1717 2.351157 GCAGATGTTCAGTTGAGTTGGC 60.351 50.000 0.00 0.00 0.00 4.52
1636 1719 4.318332 CAGATGTTCAGTTGAGTTGGCTA 58.682 43.478 0.00 0.00 0.00 3.93
1643 1726 6.072508 TGTTCAGTTGAGTTGGCTATGAAATC 60.073 38.462 0.00 0.00 0.00 2.17
1645 1728 5.645067 TCAGTTGAGTTGGCTATGAAATCTG 59.355 40.000 0.00 0.00 0.00 2.90
1659 1744 7.148272 GCTATGAAATCTGAGCAGAGTTTCTTT 60.148 37.037 13.52 5.41 44.55 2.52
1660 1745 6.309712 TGAAATCTGAGCAGAGTTTCTTTG 57.690 37.500 13.52 0.00 44.55 2.77
1661 1746 5.824624 TGAAATCTGAGCAGAGTTTCTTTGT 59.175 36.000 13.52 0.00 44.55 2.83
1662 1747 6.992123 TGAAATCTGAGCAGAGTTTCTTTGTA 59.008 34.615 13.52 3.06 44.55 2.41
1663 1748 6.793492 AATCTGAGCAGAGTTTCTTTGTAC 57.207 37.500 6.34 0.00 41.33 2.90
1664 1749 5.537300 TCTGAGCAGAGTTTCTTTGTACT 57.463 39.130 0.00 0.00 32.82 2.73
1691 1778 4.823989 CCCTGATCAGTTCAAGTTCAGTTT 59.176 41.667 21.11 0.00 33.19 2.66
1736 1823 5.882557 AGTTCATGTTCAGTTCAGTTCAGTT 59.117 36.000 0.00 0.00 0.00 3.16
1737 1824 5.739752 TCATGTTCAGTTCAGTTCAGTTG 57.260 39.130 0.00 0.00 0.00 3.16
1738 1825 4.035558 TCATGTTCAGTTCAGTTCAGTTGC 59.964 41.667 0.00 0.00 0.00 4.17
1742 1829 3.872696 TCAGTTCAGTTCAGTTGCAAGA 58.127 40.909 0.00 0.00 0.00 3.02
1743 1830 4.260985 TCAGTTCAGTTCAGTTGCAAGAA 58.739 39.130 0.00 0.00 0.00 2.52
1744 1831 4.883585 TCAGTTCAGTTCAGTTGCAAGAAT 59.116 37.500 0.00 0.00 0.00 2.40
1748 1835 5.929697 TCAGTTCAGTTGCAAGAATAGTG 57.070 39.130 0.00 0.00 0.00 2.74
1750 1837 5.698089 TCAGTTCAGTTGCAAGAATAGTGAG 59.302 40.000 0.00 0.00 0.00 3.51
1945 2047 4.103153 TCATGGATATGGTTTCTCTCCACC 59.897 45.833 0.00 0.00 38.74 4.61
1948 2050 2.661176 TATGGTTTCTCTCCACCCCT 57.339 50.000 0.00 0.00 37.81 4.79
1952 2054 0.402121 GTTTCTCTCCACCCCTTGCT 59.598 55.000 0.00 0.00 0.00 3.91
1963 2065 0.548031 CCCCTTGCTCTGCTCCATTA 59.452 55.000 0.00 0.00 0.00 1.90
1969 2071 1.134995 TGCTCTGCTCCATTACTGACG 60.135 52.381 0.00 0.00 0.00 4.35
1970 2078 1.804372 GCTCTGCTCCATTACTGACGG 60.804 57.143 0.00 0.00 0.00 4.79
2293 2406 1.000843 GTTGTTGGTTGGGGCATCTTC 59.999 52.381 0.00 0.00 0.00 2.87
2391 2508 9.430838 CTGATAACAGAAGAAAAAGATATTGCG 57.569 33.333 0.00 0.00 46.03 4.85
2400 2517 8.847444 AAGAAAAAGATATTGCGATCATTCAC 57.153 30.769 0.00 0.00 0.00 3.18
2406 2523 6.732154 AGATATTGCGATCATTCACTTTTGG 58.268 36.000 0.00 0.00 0.00 3.28
2442 2559 2.919229 CCGTCGCGTCACTTATTTTAGT 59.081 45.455 5.77 0.00 0.00 2.24
2448 2565 6.690098 GTCGCGTCACTTATTTTAGTCTGATA 59.310 38.462 5.77 0.00 0.00 2.15
2450 2567 7.919091 TCGCGTCACTTATTTTAGTCTGATATT 59.081 33.333 5.77 0.00 0.00 1.28
2467 2584 9.383519 GTCTGATATTCAAGGATTTGTTGTCTA 57.616 33.333 0.00 0.00 35.73 2.59
2469 2586 9.388506 CTGATATTCAAGGATTTGTTGTCTAGT 57.611 33.333 0.00 0.00 35.73 2.57
2473 2590 7.639113 TTCAAGGATTTGTTGTCTAGTTTGT 57.361 32.000 0.00 0.00 35.73 2.83
2514 2631 8.378421 GCTCTGAATTTACATGCTTCATTTTTC 58.622 33.333 0.00 0.00 0.00 2.29
2582 2699 3.110178 CCGAGACGACGTTTGGGC 61.110 66.667 6.64 0.00 0.00 5.36
2650 2767 0.930726 AGCCTAGAGGTACCAGAGCT 59.069 55.000 15.94 11.55 39.10 4.09
2724 2973 5.482908 ACTGTCTTTGATATGCTTTCTCGT 58.517 37.500 0.00 0.00 0.00 4.18
2769 3018 7.698970 GGTTTTCGACATTTGTTTACTCTTCAA 59.301 33.333 0.00 0.00 0.00 2.69
2859 3108 6.462073 ACGTAAAACTAGCTGTTATGTGTG 57.538 37.500 0.00 0.00 38.03 3.82
2884 3133 0.854218 TGTAGCCCCTTTTTCCACCA 59.146 50.000 0.00 0.00 0.00 4.17
2894 3143 4.188462 CCTTTTTCCACCAACCAAGTTTC 58.812 43.478 0.00 0.00 0.00 2.78
2895 3144 3.512033 TTTTCCACCAACCAAGTTTCG 57.488 42.857 0.00 0.00 0.00 3.46
2901 3150 3.615056 CCACCAACCAAGTTTCGAAAAAC 59.385 43.478 13.10 1.47 44.24 2.43
2982 3232 5.449553 AGATTTTGACTTGTTCCTGTCCTT 58.550 37.500 0.00 0.00 32.67 3.36
2983 3233 5.532779 AGATTTTGACTTGTTCCTGTCCTTC 59.467 40.000 0.00 0.00 32.67 3.46
2996 3246 3.077359 CTGTCCTTCTGTGGATGAAACC 58.923 50.000 0.00 0.00 38.52 3.27
3000 3250 3.913799 TCCTTCTGTGGATGAAACCCTTA 59.086 43.478 0.00 0.00 0.00 2.69
3052 3303 3.066900 GTGCAGATTCGAGAGCTAGGTAA 59.933 47.826 0.00 0.00 0.00 2.85
3075 3326 9.341899 GTAAATCTACACTTGCCAGTTTATTTG 57.658 33.333 0.00 0.00 0.00 2.32
3131 3382 5.741011 TGATCTATTTGTACCCACTGTTCC 58.259 41.667 0.00 0.00 0.00 3.62
3256 3508 5.507817 GCATTCAGGTGAACATCTTTGTTGA 60.508 40.000 0.00 0.00 46.01 3.18
3355 3713 7.014905 ACAGTTACTAGTGTCCAGTACATTCAA 59.985 37.037 5.39 0.00 41.10 2.69
3471 3832 3.715628 ACAATGGCTTCTGTGTGTTTC 57.284 42.857 0.00 0.00 0.00 2.78
3517 3878 5.765176 CTCTTCATCTTTTTGCACATGTGA 58.235 37.500 29.80 11.67 0.00 3.58
3518 3879 6.146601 TCTTCATCTTTTTGCACATGTGAA 57.853 33.333 29.80 17.53 0.00 3.18
3536 3900 7.386299 ACATGTGAAGTAGAACAAGAGAATCAC 59.614 37.037 0.00 0.00 37.82 3.06
3547 3911 7.768120 AGAACAAGAGAATCACATCATCCTTAC 59.232 37.037 0.00 0.00 37.82 2.34
3568 3932 5.366829 ACGGCTGTTAACCTTTTATGTTC 57.633 39.130 2.48 0.00 0.00 3.18
3653 4017 8.182227 GTCACTTTACAAGGTAATTATGCTTCC 58.818 37.037 0.00 0.00 0.00 3.46
3655 4019 8.739972 CACTTTACAAGGTAATTATGCTTCCTT 58.260 33.333 0.00 0.00 38.79 3.36
3675 4039 0.036858 GACTGAACCTGACTGGCTCC 60.037 60.000 0.00 0.00 40.22 4.70
3680 4044 1.001633 GAACCTGACTGGCTCCGTTTA 59.998 52.381 0.00 0.00 40.22 2.01
3686 4050 2.158957 TGACTGGCTCCGTTTATCCATC 60.159 50.000 0.00 0.00 0.00 3.51
3687 4051 1.837439 ACTGGCTCCGTTTATCCATCA 59.163 47.619 0.00 0.00 0.00 3.07
3689 4053 3.070018 CTGGCTCCGTTTATCCATCATC 58.930 50.000 0.00 0.00 0.00 2.92
3696 4060 5.297547 TCCGTTTATCCATCATCTGCTTAC 58.702 41.667 0.00 0.00 0.00 2.34
3698 4062 5.056480 CGTTTATCCATCATCTGCTTACCA 58.944 41.667 0.00 0.00 0.00 3.25
3793 4157 1.998315 CACTTCCTTCACAGATCGCAG 59.002 52.381 0.00 0.00 0.00 5.18
3798 4162 2.762887 TCCTTCACAGATCGCAGAGAAT 59.237 45.455 0.00 0.00 43.63 2.40
3803 4167 5.330455 TCACAGATCGCAGAGAATTTACT 57.670 39.130 0.00 0.00 43.63 2.24
3912 4276 4.660105 GATGTGGACGACAGAGTTAGTAC 58.340 47.826 0.00 0.00 38.23 2.73
3922 4286 4.228824 ACAGAGTTAGTACCCTGTTTCCA 58.771 43.478 0.00 0.00 36.57 3.53
4093 4457 1.022982 TGAGCTCAATCTGCCAAGCG 61.023 55.000 15.67 0.00 39.72 4.68
4108 4472 3.006537 GCCAAGCGGATACTATGGTTCTA 59.993 47.826 0.00 0.00 33.63 2.10
4144 4508 2.676342 GGAAATTATCGTGTCGGCAGTT 59.324 45.455 0.00 0.00 0.00 3.16
4298 4664 0.251297 TCTGCAGTTTGTCCCATGGG 60.251 55.000 26.30 26.30 0.00 4.00
4299 4665 1.880819 CTGCAGTTTGTCCCATGGGC 61.881 60.000 27.41 20.81 34.68 5.36
4375 4744 7.042992 CGAAGCAAACGAGGTATTTATGATGTA 60.043 37.037 0.00 0.00 0.00 2.29
4376 4745 7.715265 AGCAAACGAGGTATTTATGATGTAG 57.285 36.000 0.00 0.00 0.00 2.74
4377 4746 7.272978 AGCAAACGAGGTATTTATGATGTAGT 58.727 34.615 0.00 0.00 0.00 2.73
4411 4784 6.812879 AAAATAGTGTGCCAGTTTACCTAC 57.187 37.500 0.00 0.00 0.00 3.18
4412 4785 2.853235 AGTGTGCCAGTTTACCTACC 57.147 50.000 0.00 0.00 0.00 3.18
4539 4912 4.273969 CGCCACAAAAACCAGTAAGTTCTA 59.726 41.667 0.00 0.00 0.00 2.10
4767 5144 7.989947 TGGTACTCCCTCTGTAAAGAAATAT 57.010 36.000 0.00 0.00 0.00 1.28
4774 5151 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
4851 5228 4.861102 AGTTCTTCTTTGGAAGCATTGG 57.139 40.909 1.35 0.00 46.12 3.16
5030 5411 0.250234 TGGTCATGCTTCCTCTTCGG 59.750 55.000 0.00 0.00 0.00 4.30
5075 5456 1.610886 GGACTTCTAAAGCCTTGCCGT 60.611 52.381 0.00 0.00 0.00 5.68
5120 5501 1.200948 GGAACTGGCAAGACAATGCTC 59.799 52.381 0.00 0.00 45.68 4.26
5165 5546 0.248377 GCGCCAGCTTCATCAATGTC 60.248 55.000 0.00 0.00 41.01 3.06
5270 5651 5.297029 GGCTCCTACTATCATTTTTGTGGAC 59.703 44.000 0.00 0.00 0.00 4.02
5420 5808 1.073177 CCGCGACAAATAGACCGTTT 58.927 50.000 8.23 0.00 0.00 3.60
5453 5841 4.963318 AGCCATCATTAGGAGATTCGAA 57.037 40.909 0.00 0.00 0.00 3.71
5478 5866 2.490903 AGGTCTGTTCAAATGCAGCATC 59.509 45.455 8.77 0.00 33.09 3.91
5479 5867 2.229543 GGTCTGTTCAAATGCAGCATCA 59.770 45.455 8.77 0.64 33.09 3.07
5481 5869 3.857665 GTCTGTTCAAATGCAGCATCATG 59.142 43.478 8.77 11.28 33.09 3.07
5482 5870 3.508402 TCTGTTCAAATGCAGCATCATGT 59.492 39.130 8.77 0.00 33.09 3.21
5483 5871 4.021807 TCTGTTCAAATGCAGCATCATGTT 60.022 37.500 8.77 0.00 33.09 2.71
5485 5873 3.239587 TCAAATGCAGCATCATGTTGG 57.760 42.857 8.77 0.00 0.00 3.77
5486 5874 2.563620 TCAAATGCAGCATCATGTTGGT 59.436 40.909 8.77 2.62 0.00 3.67
5487 5875 2.665649 AATGCAGCATCATGTTGGTG 57.334 45.000 24.88 24.88 45.57 4.17
5498 5886 6.043590 AGCATCATGTTGGTGGAGAATAGATA 59.956 38.462 7.65 0.00 0.00 1.98
5590 5978 1.840635 GGCCTTCCCACTCAAGATAGT 59.159 52.381 0.00 0.00 0.00 2.12
5702 6090 2.084546 GCGGCAGTGATCTTAAGGTTT 58.915 47.619 1.85 0.00 0.00 3.27
5705 6093 4.250464 CGGCAGTGATCTTAAGGTTTGTA 58.750 43.478 1.85 0.00 0.00 2.41
5711 6107 8.082242 GCAGTGATCTTAAGGTTTGTACATTTT 58.918 33.333 1.85 0.00 29.89 1.82
5742 6138 8.661752 AACCTGAGTTAGTAGGTAGTTATTGT 57.338 34.615 0.00 0.00 46.28 2.71
5743 6139 8.291191 ACCTGAGTTAGTAGGTAGTTATTGTC 57.709 38.462 0.00 0.00 45.20 3.18
5744 6140 7.892241 ACCTGAGTTAGTAGGTAGTTATTGTCA 59.108 37.037 0.00 0.00 45.20 3.58
5802 6198 2.665165 TGCACCCAGAATCTTTGTGTT 58.335 42.857 9.70 0.00 0.00 3.32
5832 6228 1.454479 CCGACCGGTTAGGGAGCTA 60.454 63.158 19.05 0.00 46.96 3.32
5835 6231 1.482954 GACCGGTTAGGGAGCTACTT 58.517 55.000 9.42 0.00 46.96 2.24
5888 6483 8.392372 AGGTTACTTACAAATGTCTTCTTTCC 57.608 34.615 0.00 0.00 0.00 3.13
5900 6495 8.635765 AATGTCTTCTTTCCTAAGCATTTACA 57.364 30.769 0.00 0.00 32.12 2.41
6022 6627 5.047519 ACATTCTTTGATGCTTCAGGAAAGG 60.048 40.000 17.30 15.30 35.37 3.11
6223 6837 1.445716 CGGTCGTCGATCTTAGGCCT 61.446 60.000 11.78 11.78 42.43 5.19
6265 6879 2.242043 CAGGCCAAAAATCAGGTGAGT 58.758 47.619 5.01 0.00 0.00 3.41
6402 7019 0.322975 ACGAGCTGAAGCAGTGGAAT 59.677 50.000 4.90 0.00 45.16 3.01
6528 7151 1.356979 GCAGCAGAGCATGAGCATG 59.643 57.895 6.11 6.11 45.49 4.06
6552 7176 0.771127 TGTTGGTGGGAAAGGAGAGG 59.229 55.000 0.00 0.00 0.00 3.69
6703 7781 2.370519 TGTAGCTGGTTTGTTAGCCTGA 59.629 45.455 0.00 0.00 40.76 3.86
6835 7914 3.181511 TGTTTGCTTCAGTTGTTCAGTCG 60.182 43.478 0.00 0.00 0.00 4.18
6880 7959 7.339721 TGAGTCGGATAACAGAAAAGAGATAGT 59.660 37.037 0.00 0.00 0.00 2.12
6908 8002 2.892425 GCGCCGAGGTTGATCCAG 60.892 66.667 0.00 0.00 39.02 3.86
7016 8114 8.094798 TGAATACTACACATTGTCCACTTTTC 57.905 34.615 0.00 0.00 0.00 2.29
7033 8131 6.578545 CCACTTTTCGAATACACATTGAACAG 59.421 38.462 0.00 0.00 0.00 3.16
7034 8132 6.578545 CACTTTTCGAATACACATTGAACAGG 59.421 38.462 0.00 0.00 0.00 4.00
7075 8175 7.849804 ACATTTATCAGATACACCTTCACAC 57.150 36.000 0.00 0.00 0.00 3.82
7096 8196 7.717436 TCACACTGTTGTTAAATACCTGATGAA 59.283 33.333 0.00 0.00 31.66 2.57
7099 8199 8.017373 CACTGTTGTTAAATACCTGATGAACAG 58.983 37.037 0.00 0.00 45.36 3.16
7100 8200 7.719633 ACTGTTGTTAAATACCTGATGAACAGT 59.280 33.333 0.00 0.00 43.69 3.55
7101 8201 8.458573 TGTTGTTAAATACCTGATGAACAGTT 57.541 30.769 0.00 0.00 44.40 3.16
7136 8236 8.114359 ACACATTCGAACAATTTTTAACACAG 57.886 30.769 0.00 0.00 0.00 3.66
7163 8263 8.854979 TTGTGCATTTTTCATATACATGCTAC 57.145 30.769 0.00 2.30 40.79 3.58
7164 8264 8.224389 TGTGCATTTTTCATATACATGCTACT 57.776 30.769 0.00 0.00 40.79 2.57
7165 8265 8.344831 TGTGCATTTTTCATATACATGCTACTC 58.655 33.333 0.00 0.00 40.79 2.59
7166 8266 7.805071 GTGCATTTTTCATATACATGCTACTCC 59.195 37.037 0.00 0.00 40.79 3.85
7167 8267 7.040478 TGCATTTTTCATATACATGCTACTCCC 60.040 37.037 0.00 0.00 40.79 4.30
7168 8268 7.175641 GCATTTTTCATATACATGCTACTCCCT 59.824 37.037 0.00 0.00 37.78 4.20
7169 8269 8.725148 CATTTTTCATATACATGCTACTCCCTC 58.275 37.037 0.00 0.00 31.73 4.30
7170 8270 6.360370 TTTCATATACATGCTACTCCCTCC 57.640 41.667 0.00 0.00 31.73 4.30
7171 8271 4.017126 TCATATACATGCTACTCCCTCCG 58.983 47.826 0.00 0.00 31.73 4.63
7173 8273 2.154567 TACATGCTACTCCCTCCGTT 57.845 50.000 0.00 0.00 0.00 4.44
7174 8274 0.824759 ACATGCTACTCCCTCCGTTC 59.175 55.000 0.00 0.00 0.00 3.95
7176 8276 1.482593 CATGCTACTCCCTCCGTTCTT 59.517 52.381 0.00 0.00 0.00 2.52
7177 8277 1.640917 TGCTACTCCCTCCGTTCTTT 58.359 50.000 0.00 0.00 0.00 2.52
7178 8278 1.975680 TGCTACTCCCTCCGTTCTTTT 59.024 47.619 0.00 0.00 0.00 2.27
7199 8299 6.620253 TTTTTGTAAGACGTTTTGAACAGC 57.380 33.333 0.83 0.00 0.00 4.40
7203 8303 3.675467 AAGACGTTTTGAACAGCTGAC 57.325 42.857 23.35 14.31 0.00 3.51
7204 8304 2.627945 AGACGTTTTGAACAGCTGACA 58.372 42.857 23.35 16.83 0.00 3.58
7205 8305 2.351726 AGACGTTTTGAACAGCTGACAC 59.648 45.455 23.35 11.36 0.00 3.67
7206 8306 2.351726 GACGTTTTGAACAGCTGACACT 59.648 45.455 23.35 0.91 0.00 3.55
7207 8307 2.095853 ACGTTTTGAACAGCTGACACTG 59.904 45.455 23.35 11.12 43.59 3.66
7208 8308 2.351418 CGTTTTGAACAGCTGACACTGA 59.649 45.455 23.35 2.78 40.25 3.41
7209 8309 3.181511 CGTTTTGAACAGCTGACACTGAA 60.182 43.478 23.35 8.64 40.25 3.02
7210 8310 4.098416 GTTTTGAACAGCTGACACTGAAC 58.902 43.478 23.35 17.52 40.25 3.18
7211 8311 2.988010 TGAACAGCTGACACTGAACT 57.012 45.000 23.35 0.00 40.25 3.01
7212 8312 4.400529 TTGAACAGCTGACACTGAACTA 57.599 40.909 23.35 0.65 40.25 2.24
7213 8313 4.607293 TGAACAGCTGACACTGAACTAT 57.393 40.909 23.35 0.00 40.25 2.12
7214 8314 4.960938 TGAACAGCTGACACTGAACTATT 58.039 39.130 23.35 0.00 40.25 1.73
7215 8315 5.368145 TGAACAGCTGACACTGAACTATTT 58.632 37.500 23.35 0.00 40.25 1.40
7216 8316 5.237127 TGAACAGCTGACACTGAACTATTTG 59.763 40.000 23.35 0.00 40.25 2.32
7217 8317 4.067896 ACAGCTGACACTGAACTATTTGG 58.932 43.478 23.35 0.00 40.25 3.28
7218 8318 4.202357 ACAGCTGACACTGAACTATTTGGA 60.202 41.667 23.35 0.00 40.25 3.53
7219 8319 4.391216 CAGCTGACACTGAACTATTTGGAG 59.609 45.833 8.42 0.00 40.25 3.86
7220 8320 3.126000 GCTGACACTGAACTATTTGGAGC 59.874 47.826 0.00 0.00 0.00 4.70
7221 8321 3.325870 TGACACTGAACTATTTGGAGCG 58.674 45.455 0.00 0.00 0.00 5.03
7222 8322 3.006430 TGACACTGAACTATTTGGAGCGA 59.994 43.478 0.00 0.00 0.00 4.93
7223 8323 4.184629 GACACTGAACTATTTGGAGCGAT 58.815 43.478 0.00 0.00 0.00 4.58
7224 8324 3.935203 ACACTGAACTATTTGGAGCGATG 59.065 43.478 0.00 0.00 0.00 3.84
7225 8325 3.935203 CACTGAACTATTTGGAGCGATGT 59.065 43.478 0.00 0.00 0.00 3.06
7226 8326 4.033358 CACTGAACTATTTGGAGCGATGTC 59.967 45.833 0.00 0.00 0.00 3.06
7227 8327 4.081420 ACTGAACTATTTGGAGCGATGTCT 60.081 41.667 0.00 0.00 0.00 3.41
7228 8328 4.183865 TGAACTATTTGGAGCGATGTCTG 58.816 43.478 0.00 0.00 0.00 3.51
7229 8329 4.081697 TGAACTATTTGGAGCGATGTCTGA 60.082 41.667 0.00 0.00 0.00 3.27
7230 8330 4.471904 ACTATTTGGAGCGATGTCTGAA 57.528 40.909 0.00 0.00 0.00 3.02
7231 8331 5.028549 ACTATTTGGAGCGATGTCTGAAT 57.971 39.130 0.00 0.00 0.00 2.57
7232 8332 5.431765 ACTATTTGGAGCGATGTCTGAATT 58.568 37.500 0.00 0.00 0.00 2.17
7233 8333 4.627611 ATTTGGAGCGATGTCTGAATTG 57.372 40.909 0.00 0.00 0.00 2.32
7234 8334 2.768253 TGGAGCGATGTCTGAATTGT 57.232 45.000 0.00 0.00 0.00 2.71
7235 8335 2.621338 TGGAGCGATGTCTGAATTGTC 58.379 47.619 0.00 0.00 0.00 3.18
7236 8336 2.234661 TGGAGCGATGTCTGAATTGTCT 59.765 45.455 0.00 0.00 0.00 3.41
7237 8337 3.447229 TGGAGCGATGTCTGAATTGTCTA 59.553 43.478 0.00 0.00 0.00 2.59
7238 8338 4.081697 TGGAGCGATGTCTGAATTGTCTAA 60.082 41.667 0.00 0.00 0.00 2.10
7239 8339 4.870426 GGAGCGATGTCTGAATTGTCTAAA 59.130 41.667 0.00 0.00 0.00 1.85
7240 8340 5.220491 GGAGCGATGTCTGAATTGTCTAAAC 60.220 44.000 0.00 0.00 0.00 2.01
7241 8341 4.327357 AGCGATGTCTGAATTGTCTAAACG 59.673 41.667 0.00 0.00 0.00 3.60
7242 8342 4.091509 GCGATGTCTGAATTGTCTAAACGT 59.908 41.667 0.00 0.00 0.00 3.99
7243 8343 5.721510 GCGATGTCTGAATTGTCTAAACGTC 60.722 44.000 0.00 0.00 0.00 4.34
7244 8344 5.573282 CGATGTCTGAATTGTCTAAACGTCT 59.427 40.000 0.00 0.00 0.00 4.18
7245 8345 6.089551 CGATGTCTGAATTGTCTAAACGTCTT 59.910 38.462 0.00 0.00 0.00 3.01
7246 8346 7.272731 CGATGTCTGAATTGTCTAAACGTCTTA 59.727 37.037 0.00 0.00 0.00 2.10
7247 8347 9.088512 GATGTCTGAATTGTCTAAACGTCTTAT 57.911 33.333 0.00 0.00 0.00 1.73
7249 8349 9.917129 TGTCTGAATTGTCTAAACGTCTTATAA 57.083 29.630 0.00 0.00 0.00 0.98
7258 8358 9.531942 TGTCTAAACGTCTTATAAAAGTGAACA 57.468 29.630 0.00 0.00 34.13 3.18
7260 8360 9.970395 TCTAAACGTCTTATAAAAGTGAACAGA 57.030 29.630 0.00 0.00 34.13 3.41
7262 8362 7.653767 AACGTCTTATAAAAGTGAACAGAGG 57.346 36.000 0.00 0.00 34.13 3.69
7263 8363 6.164176 ACGTCTTATAAAAGTGAACAGAGGG 58.836 40.000 0.00 0.00 34.13 4.30
7264 8364 6.014840 ACGTCTTATAAAAGTGAACAGAGGGA 60.015 38.462 0.00 0.00 34.13 4.20
7265 8365 6.531948 CGTCTTATAAAAGTGAACAGAGGGAG 59.468 42.308 0.00 0.00 34.13 4.30
7266 8366 7.387643 GTCTTATAAAAGTGAACAGAGGGAGT 58.612 38.462 0.00 0.00 34.13 3.85
7267 8367 8.529476 GTCTTATAAAAGTGAACAGAGGGAGTA 58.471 37.037 0.00 0.00 34.13 2.59
7268 8368 9.096823 TCTTATAAAAGTGAACAGAGGGAGTAA 57.903 33.333 0.00 0.00 34.13 2.24
7269 8369 9.152595 CTTATAAAAGTGAACAGAGGGAGTAAC 57.847 37.037 0.00 0.00 0.00 2.50
7270 8370 5.367945 AAAAGTGAACAGAGGGAGTAACA 57.632 39.130 0.00 0.00 0.00 2.41
7271 8371 5.568620 AAAGTGAACAGAGGGAGTAACAT 57.431 39.130 0.00 0.00 0.00 2.71
7272 8372 5.568620 AAGTGAACAGAGGGAGTAACATT 57.431 39.130 0.00 0.00 0.00 2.71
7361 8470 5.108517 TGGTGCAAACATTTTTCAGAACTC 58.891 37.500 0.00 0.00 0.00 3.01
7367 8476 2.480419 ACATTTTTCAGAACTCGCCGAG 59.520 45.455 13.52 13.52 35.52 4.63
7370 8479 0.944311 TTTCAGAACTCGCCGAGCAC 60.944 55.000 15.20 8.51 32.04 4.40
7371 8480 2.049156 CAGAACTCGCCGAGCACA 60.049 61.111 15.20 0.00 32.04 4.57
7372 8481 1.664649 CAGAACTCGCCGAGCACAA 60.665 57.895 15.20 0.00 32.04 3.33
7373 8482 1.069090 AGAACTCGCCGAGCACAAA 59.931 52.632 15.20 0.00 32.04 2.83
7378 8487 2.147958 ACTCGCCGAGCACAAATTTTA 58.852 42.857 15.20 0.00 32.04 1.52
7379 8488 2.095919 ACTCGCCGAGCACAAATTTTAC 60.096 45.455 15.20 0.00 32.04 2.01
7390 8499 6.381801 AGCACAAATTTTACACTACATGAGC 58.618 36.000 0.00 0.00 0.00 4.26
7422 8531 7.623268 AAACGTGTGATTTTCTTAATGAAGC 57.377 32.000 0.00 0.00 35.89 3.86
7423 8532 5.382303 ACGTGTGATTTTCTTAATGAAGCG 58.618 37.500 0.00 0.00 35.89 4.68
7435 8544 7.851822 TCTTAATGAAGCGAACATTGTTTTC 57.148 32.000 3.08 4.70 38.25 2.29
7448 8557 8.164058 GAACATTGTTTTCGAAAGTACAAACA 57.836 30.769 24.32 16.36 35.99 2.83
7452 8561 9.965748 CATTGTTTTCGAAAGTACAAACATTTT 57.034 25.926 24.32 10.24 36.89 1.82
7558 8667 7.793948 AGTAATTGTACCATATACTCCCTCC 57.206 40.000 0.00 0.00 0.00 4.30
7559 8668 7.310634 AGTAATTGTACCATATACTCCCTCCA 58.689 38.462 0.00 0.00 0.00 3.86
7560 8669 7.962003 AGTAATTGTACCATATACTCCCTCCAT 59.038 37.037 0.00 0.00 0.00 3.41
7561 8670 7.648177 AATTGTACCATATACTCCCTCCATT 57.352 36.000 0.00 0.00 0.00 3.16
7562 8671 6.681729 TTGTACCATATACTCCCTCCATTC 57.318 41.667 0.00 0.00 0.00 2.67
7563 8672 5.091552 TGTACCATATACTCCCTCCATTCC 58.908 45.833 0.00 0.00 0.00 3.01
7564 8673 4.510303 ACCATATACTCCCTCCATTCCT 57.490 45.455 0.00 0.00 0.00 3.36
7565 8674 5.633473 ACCATATACTCCCTCCATTCCTA 57.367 43.478 0.00 0.00 0.00 2.94
7566 8675 5.989717 ACCATATACTCCCTCCATTCCTAA 58.010 41.667 0.00 0.00 0.00 2.69
7567 8676 6.399013 ACCATATACTCCCTCCATTCCTAAA 58.601 40.000 0.00 0.00 0.00 1.85
7568 8677 7.031917 ACCATATACTCCCTCCATTCCTAAAT 58.968 38.462 0.00 0.00 0.00 1.40
7569 8678 8.191110 ACCATATACTCCCTCCATTCCTAAATA 58.809 37.037 0.00 0.00 0.00 1.40
7570 8679 9.230477 CCATATACTCCCTCCATTCCTAAATAT 57.770 37.037 0.00 0.00 0.00 1.28
7574 8683 9.860393 ATACTCCCTCCATTCCTAAATATAAGT 57.140 33.333 0.00 0.00 0.00 2.24
7575 8684 8.208575 ACTCCCTCCATTCCTAAATATAAGTC 57.791 38.462 0.00 0.00 0.00 3.01
7576 8685 8.019652 ACTCCCTCCATTCCTAAATATAAGTCT 58.980 37.037 0.00 0.00 0.00 3.24
7577 8686 8.814448 TCCCTCCATTCCTAAATATAAGTCTT 57.186 34.615 0.00 0.00 0.00 3.01
7578 8687 9.237706 TCCCTCCATTCCTAAATATAAGTCTTT 57.762 33.333 0.00 0.00 0.00 2.52
7579 8688 9.868160 CCCTCCATTCCTAAATATAAGTCTTTT 57.132 33.333 0.00 0.00 0.00 2.27
7607 8716 3.812156 TCCATTATGGACTACACACGG 57.188 47.619 10.29 0.00 42.67 4.94
7608 8717 3.367321 TCCATTATGGACTACACACGGA 58.633 45.455 10.29 0.00 42.67 4.69
7609 8718 3.383505 TCCATTATGGACTACACACGGAG 59.616 47.826 10.29 0.00 42.67 4.63
7610 8719 2.953466 TTATGGACTACACACGGAGC 57.047 50.000 0.00 0.00 0.00 4.70
7611 8720 1.842052 TATGGACTACACACGGAGCA 58.158 50.000 0.00 0.00 0.00 4.26
7612 8721 0.973632 ATGGACTACACACGGAGCAA 59.026 50.000 0.00 0.00 0.00 3.91
7613 8722 0.753867 TGGACTACACACGGAGCAAA 59.246 50.000 0.00 0.00 0.00 3.68
7614 8723 1.139256 TGGACTACACACGGAGCAAAA 59.861 47.619 0.00 0.00 0.00 2.44
7615 8724 2.224426 TGGACTACACACGGAGCAAAAT 60.224 45.455 0.00 0.00 0.00 1.82
7616 8725 2.159627 GGACTACACACGGAGCAAAATG 59.840 50.000 0.00 0.00 0.00 2.32
7617 8726 3.064207 GACTACACACGGAGCAAAATGA 58.936 45.455 0.00 0.00 0.00 2.57
7618 8727 3.067106 ACTACACACGGAGCAAAATGAG 58.933 45.455 0.00 0.00 0.00 2.90
7619 8728 0.593128 ACACACGGAGCAAAATGAGC 59.407 50.000 0.00 0.00 0.00 4.26
7620 8729 0.453282 CACACGGAGCAAAATGAGCG 60.453 55.000 0.00 0.00 37.01 5.03
7621 8730 0.602638 ACACGGAGCAAAATGAGCGA 60.603 50.000 0.00 0.00 37.01 4.93
7622 8731 0.516877 CACGGAGCAAAATGAGCGAA 59.483 50.000 0.00 0.00 37.01 4.70
7623 8732 1.131126 CACGGAGCAAAATGAGCGAAT 59.869 47.619 0.00 0.00 37.01 3.34
7624 8733 1.398390 ACGGAGCAAAATGAGCGAATC 59.602 47.619 0.00 0.00 37.01 2.52
7625 8734 1.667724 CGGAGCAAAATGAGCGAATCT 59.332 47.619 0.00 0.00 37.01 2.40
7626 8735 2.866156 CGGAGCAAAATGAGCGAATCTA 59.134 45.455 0.00 0.00 37.01 1.98
7627 8736 3.496130 CGGAGCAAAATGAGCGAATCTAT 59.504 43.478 0.00 0.00 37.01 1.98
7628 8737 4.686091 CGGAGCAAAATGAGCGAATCTATA 59.314 41.667 0.00 0.00 37.01 1.31
7629 8738 5.388890 CGGAGCAAAATGAGCGAATCTATAC 60.389 44.000 0.00 0.00 37.01 1.47
7630 8739 5.698545 GGAGCAAAATGAGCGAATCTATACT 59.301 40.000 0.00 0.00 37.01 2.12
7631 8740 6.128688 GGAGCAAAATGAGCGAATCTATACTC 60.129 42.308 0.00 0.00 37.01 2.59
7632 8741 6.520272 AGCAAAATGAGCGAATCTATACTCT 58.480 36.000 0.00 0.00 37.01 3.24
7633 8742 7.661968 AGCAAAATGAGCGAATCTATACTCTA 58.338 34.615 0.00 0.00 37.01 2.43
7634 8743 8.144478 AGCAAAATGAGCGAATCTATACTCTAA 58.856 33.333 0.00 0.00 37.01 2.10
7635 8744 8.765219 GCAAAATGAGCGAATCTATACTCTAAA 58.235 33.333 0.00 0.00 0.00 1.85
7703 8812 8.959705 AAAAAGACTTATATTTAGGGACGGAG 57.040 34.615 0.00 0.00 0.00 4.63
7704 8813 6.667558 AAGACTTATATTTAGGGACGGAGG 57.332 41.667 0.00 0.00 0.00 4.30
7705 8814 5.085219 AGACTTATATTTAGGGACGGAGGG 58.915 45.833 0.00 0.00 0.00 4.30
7706 8815 5.082425 GACTTATATTTAGGGACGGAGGGA 58.918 45.833 0.00 0.00 0.00 4.20
7707 8816 5.470501 ACTTATATTTAGGGACGGAGGGAA 58.529 41.667 0.00 0.00 0.00 3.97
7708 8817 6.089502 ACTTATATTTAGGGACGGAGGGAAT 58.910 40.000 0.00 0.00 0.00 3.01
7709 8818 7.251195 ACTTATATTTAGGGACGGAGGGAATA 58.749 38.462 0.00 0.00 0.00 1.75
7778 8918 6.319141 AGGAAAGAAAAACAAGAATCCTCG 57.681 37.500 0.00 0.00 30.39 4.63
7779 8919 6.062095 AGGAAAGAAAAACAAGAATCCTCGA 58.938 36.000 0.00 0.00 30.39 4.04
7845 8986 2.135933 GAGTTCTTGGTTGGTCGTGAG 58.864 52.381 0.00 0.00 0.00 3.51
7852 8993 3.102052 TGGTTGGTCGTGAGAAACTAC 57.898 47.619 0.00 0.00 45.01 2.73
7853 8994 2.224113 TGGTTGGTCGTGAGAAACTACC 60.224 50.000 0.00 0.00 43.45 3.18
7855 8996 2.806608 TGGTCGTGAGAAACTACCAC 57.193 50.000 0.00 0.00 46.72 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 8.267620 TCTTTCATGACCACCTATCTATTCAT 57.732 34.615 0.00 0.00 0.00 2.57
30 31 0.307760 CGTTTCCAGCAACGCTCTTT 59.692 50.000 0.00 0.00 42.81 2.52
32 33 3.642755 CGTTTCCAGCAACGCTCT 58.357 55.556 0.00 0.00 42.81 4.09
62 63 3.655276 TTCCGCTCTAAGAAGAAACGT 57.345 42.857 0.00 0.00 32.26 3.99
79 80 2.759560 ATGGGCCATGGCGTTTCC 60.760 61.111 29.90 24.35 43.06 3.13
120 141 0.319211 TCAACCAAGCGTCCTACGTG 60.319 55.000 0.00 0.00 44.73 4.49
139 161 3.270877 GGCGTTTCTACTTGACCATGAT 58.729 45.455 0.00 0.00 0.00 2.45
140 162 2.037902 TGGCGTTTCTACTTGACCATGA 59.962 45.455 0.00 0.00 0.00 3.07
147 169 4.035208 AGACAAGTTTGGCGTTTCTACTTG 59.965 41.667 10.70 10.70 46.79 3.16
179 201 5.334414 GGATCATGGCGTTTCTGCTAAATAG 60.334 44.000 0.00 0.00 34.52 1.73
183 205 2.092968 AGGATCATGGCGTTTCTGCTAA 60.093 45.455 0.00 0.00 34.52 3.09
198 220 4.508405 CCCCTTTAGAAACACCAAGGATCA 60.508 45.833 0.00 0.00 38.52 2.92
199 221 4.017126 CCCCTTTAGAAACACCAAGGATC 58.983 47.826 0.00 0.00 38.52 3.36
202 224 3.238788 ACCCCTTTAGAAACACCAAGG 57.761 47.619 0.00 0.00 36.32 3.61
206 228 5.474532 ACGATTTAACCCCTTTAGAAACACC 59.525 40.000 0.00 0.00 0.00 4.16
208 230 6.063404 ACACGATTTAACCCCTTTAGAAACA 58.937 36.000 0.00 0.00 0.00 2.83
218 240 9.526713 TTTAAAAGTTTAACACGATTTAACCCC 57.473 29.630 0.00 0.00 34.22 4.95
237 262 6.538381 AGCACAAAATGAACCCAGTTTAAAAG 59.462 34.615 0.00 0.00 38.36 2.27
242 267 5.606348 TTAGCACAAAATGAACCCAGTTT 57.394 34.783 0.00 0.00 40.70 2.66
243 268 5.128663 ACTTTAGCACAAAATGAACCCAGTT 59.871 36.000 0.00 0.00 31.15 3.16
280 305 3.390639 TGGGCCAAAATCACAGTTTTGAT 59.609 39.130 2.13 0.00 46.78 2.57
305 331 4.344865 GCGGAGGCAACCCCTTCA 62.345 66.667 0.00 0.00 46.60 3.02
323 349 5.195940 CCTTGATACATGGGTCTCAACATT 58.804 41.667 0.00 0.00 35.82 2.71
343 369 3.062639 GCAACAAGCATGCCCCTT 58.937 55.556 15.66 0.00 44.79 3.95
377 403 3.243636 ACAAGCAAGCTCACCTTCAATTG 60.244 43.478 0.00 0.00 0.00 2.32
381 407 1.311859 CACAAGCAAGCTCACCTTCA 58.688 50.000 0.00 0.00 0.00 3.02
417 443 2.100631 GGGCATGGAGTGTTCGTCG 61.101 63.158 0.00 0.00 0.00 5.12
422 448 1.077265 CCAAGGGGCATGGAGTGTT 59.923 57.895 0.00 0.00 40.56 3.32
423 449 1.852157 TCCAAGGGGCATGGAGTGT 60.852 57.895 0.00 0.00 41.98 3.55
447 474 1.002087 CCTCAAAAGTGGACGCCTAGT 59.998 52.381 0.00 0.00 0.00 2.57
463 490 1.070134 CGAGAAAACCACCACTCCTCA 59.930 52.381 0.00 0.00 0.00 3.86
508 535 6.723977 AGATAATAGGCAAAACCAAACCTTGA 59.276 34.615 0.00 0.00 43.14 3.02
521 548 8.902540 AATACATCGACAAAGATAATAGGCAA 57.097 30.769 0.00 0.00 0.00 4.52
527 554 8.765219 CGAGGAAAATACATCGACAAAGATAAT 58.235 33.333 0.00 0.00 44.84 1.28
549 576 2.093306 TGTATGGTTGCAACTCGAGG 57.907 50.000 27.64 0.17 0.00 4.63
553 580 3.428045 GCCTCATTGTATGGTTGCAACTC 60.428 47.826 27.64 18.23 29.85 3.01
596 623 5.552870 ACTCCTAAAAGTCTGACACATGT 57.447 39.130 10.88 0.00 0.00 3.21
606 633 3.558418 TCAACACGCAACTCCTAAAAGTC 59.442 43.478 0.00 0.00 0.00 3.01
607 634 3.537580 TCAACACGCAACTCCTAAAAGT 58.462 40.909 0.00 0.00 0.00 2.66
608 635 3.807622 TCTCAACACGCAACTCCTAAAAG 59.192 43.478 0.00 0.00 0.00 2.27
628 657 2.066262 CAACATACCGACAAACGCTCT 58.934 47.619 0.00 0.00 41.07 4.09
676 705 3.511699 GAAAGCCGATAAAAAGCCCTTG 58.488 45.455 0.00 0.00 0.00 3.61
688 717 1.094785 CGAATTGGTGGAAAGCCGAT 58.905 50.000 0.00 0.00 36.79 4.18
699 730 3.860930 AACTGCCCCGCGAATTGGT 62.861 57.895 8.23 0.00 0.00 3.67
779 810 7.641411 GAAGTTAGCTTTACACATGTATGCATG 59.359 37.037 20.68 20.68 44.93 4.06
809 840 6.753107 AACACCCTATGGTTAATTTCTTCG 57.247 37.500 0.00 0.00 44.75 3.79
917 951 2.931649 GGGGTTCTGGTTCCGGGA 60.932 66.667 0.00 0.00 0.00 5.14
984 1018 3.190349 CCATTGGGGGAGGGTTGT 58.810 61.111 0.00 0.00 0.00 3.32
1011 1045 2.364317 TGAGGAGGAAGGCGGAGG 60.364 66.667 0.00 0.00 0.00 4.30
1057 1091 2.169832 CGCAAGAACTTGGAGGAAGA 57.830 50.000 14.95 0.00 40.74 2.87
1133 1207 2.831859 CAGGCTCCTCTGCTCCATA 58.168 57.895 0.00 0.00 0.00 2.74
1399 1474 0.251341 ACCGGCCAAATCAGAGCTTT 60.251 50.000 0.00 0.00 0.00 3.51
1406 1481 1.228306 AAACCGACCGGCCAAATCA 60.228 52.632 8.55 0.00 39.32 2.57
1407 1482 1.211709 CAAACCGACCGGCCAAATC 59.788 57.895 8.55 0.00 39.32 2.17
1408 1483 2.272447 CCAAACCGACCGGCCAAAT 61.272 57.895 8.55 0.00 39.32 2.32
1411 1494 4.939368 CACCAAACCGACCGGCCA 62.939 66.667 8.55 0.00 39.32 5.36
1414 1497 0.587768 GTAAACACCAAACCGACCGG 59.412 55.000 6.94 6.94 42.03 5.28
1421 1504 4.609783 CGGTCGAATCAGTAAACACCAAAC 60.610 45.833 0.00 0.00 0.00 2.93
1429 1512 1.733389 GCCGTCGGTCGAATCAGTAAA 60.733 52.381 13.94 0.00 42.86 2.01
1432 1515 2.181021 GCCGTCGGTCGAATCAGT 59.819 61.111 13.94 0.00 42.86 3.41
1471 1554 4.092968 GCTACAGTAAACATCAAACCGAGG 59.907 45.833 0.00 0.00 0.00 4.63
1475 1558 7.063544 CAGACTAGCTACAGTAAACATCAAACC 59.936 40.741 0.00 0.00 0.00 3.27
1476 1559 7.813148 TCAGACTAGCTACAGTAAACATCAAAC 59.187 37.037 0.00 0.00 0.00 2.93
1478 1561 7.462571 TCAGACTAGCTACAGTAAACATCAA 57.537 36.000 0.00 0.00 0.00 2.57
1479 1562 7.176865 AGTTCAGACTAGCTACAGTAAACATCA 59.823 37.037 0.00 0.00 33.32 3.07
1480 1563 7.486551 CAGTTCAGACTAGCTACAGTAAACATC 59.513 40.741 0.00 0.00 33.90 3.06
1481 1564 7.176865 TCAGTTCAGACTAGCTACAGTAAACAT 59.823 37.037 0.00 0.00 33.90 2.71
1482 1565 6.489022 TCAGTTCAGACTAGCTACAGTAAACA 59.511 38.462 0.00 0.00 33.90 2.83
1483 1566 6.910995 TCAGTTCAGACTAGCTACAGTAAAC 58.089 40.000 0.00 0.00 33.90 2.01
1484 1567 7.230913 AGTTCAGTTCAGACTAGCTACAGTAAA 59.769 37.037 0.00 0.00 33.90 2.01
1485 1568 6.715718 AGTTCAGTTCAGACTAGCTACAGTAA 59.284 38.462 0.00 0.00 33.90 2.24
1486 1569 6.239396 AGTTCAGTTCAGACTAGCTACAGTA 58.761 40.000 0.00 0.00 33.90 2.74
1565 1648 4.041723 CGAACTGCCTTTTACTTTTGGTG 58.958 43.478 0.00 0.00 0.00 4.17
1599 1682 2.238847 ATCTGCGGTACCATGCGTGT 62.239 55.000 13.54 0.00 0.00 4.49
1634 1717 7.846644 AAGAAACTCTGCTCAGATTTCATAG 57.153 36.000 21.99 7.52 37.39 2.23
1636 1719 6.489361 ACAAAGAAACTCTGCTCAGATTTCAT 59.511 34.615 21.99 14.85 37.39 2.57
1643 1726 5.837586 GAGTACAAAGAAACTCTGCTCAG 57.162 43.478 0.00 0.00 39.24 3.35
1659 1744 2.238084 ACTGATCAGGGCAGAGTACA 57.762 50.000 26.08 0.00 36.86 2.90
1660 1745 2.497675 TGAACTGATCAGGGCAGAGTAC 59.502 50.000 26.08 7.33 36.86 2.73
1661 1746 2.820178 TGAACTGATCAGGGCAGAGTA 58.180 47.619 26.08 1.70 36.86 2.59
1662 1747 1.649321 TGAACTGATCAGGGCAGAGT 58.351 50.000 26.08 1.49 36.86 3.24
1663 1748 2.027377 ACTTGAACTGATCAGGGCAGAG 60.027 50.000 26.08 20.45 39.36 3.35
1664 1749 1.980765 ACTTGAACTGATCAGGGCAGA 59.019 47.619 26.08 12.47 39.36 4.26
1667 1752 2.746362 CTGAACTTGAACTGATCAGGGC 59.254 50.000 26.08 17.14 39.36 5.19
1668 1753 4.013267 ACTGAACTTGAACTGATCAGGG 57.987 45.455 26.08 12.58 41.34 4.45
1669 1754 6.708054 ACTAAACTGAACTTGAACTGATCAGG 59.292 38.462 26.08 10.69 41.34 3.86
1713 1800 5.741388 ACTGAACTGAACTGAACATGAAC 57.259 39.130 0.00 0.00 0.00 3.18
1714 1801 5.449041 GCAACTGAACTGAACTGAACATGAA 60.449 40.000 0.00 0.00 0.00 2.57
1715 1802 4.035558 GCAACTGAACTGAACTGAACATGA 59.964 41.667 0.00 0.00 0.00 3.07
1716 1803 4.201940 TGCAACTGAACTGAACTGAACATG 60.202 41.667 0.00 0.00 0.00 3.21
1717 1804 3.947196 TGCAACTGAACTGAACTGAACAT 59.053 39.130 0.00 0.00 0.00 2.71
1718 1805 3.342719 TGCAACTGAACTGAACTGAACA 58.657 40.909 0.00 0.00 0.00 3.18
1736 1823 7.607607 ACATCAACATTACTCACTATTCTTGCA 59.392 33.333 0.00 0.00 0.00 4.08
1737 1824 7.907045 CACATCAACATTACTCACTATTCTTGC 59.093 37.037 0.00 0.00 0.00 4.01
1738 1825 8.939929 ACACATCAACATTACTCACTATTCTTG 58.060 33.333 0.00 0.00 0.00 3.02
1742 1829 7.661437 ACACACACATCAACATTACTCACTATT 59.339 33.333 0.00 0.00 0.00 1.73
1743 1830 7.161404 ACACACACATCAACATTACTCACTAT 58.839 34.615 0.00 0.00 0.00 2.12
1744 1831 6.521162 ACACACACATCAACATTACTCACTA 58.479 36.000 0.00 0.00 0.00 2.74
1748 1835 4.911610 GCAACACACACATCAACATTACTC 59.088 41.667 0.00 0.00 0.00 2.59
1750 1837 4.605968 TGCAACACACACATCAACATTAC 58.394 39.130 0.00 0.00 0.00 1.89
1933 2035 0.402121 AGCAAGGGGTGGAGAGAAAC 59.598 55.000 0.00 0.00 0.00 2.78
1945 2047 1.211457 AGTAATGGAGCAGAGCAAGGG 59.789 52.381 0.00 0.00 0.00 3.95
1948 2050 2.675032 CGTCAGTAATGGAGCAGAGCAA 60.675 50.000 0.00 0.00 0.00 3.91
1952 2054 1.476891 GTCCGTCAGTAATGGAGCAGA 59.523 52.381 0.00 0.00 43.99 4.26
1963 2065 1.005630 GAAGCAGCAGTCCGTCAGT 60.006 57.895 0.00 0.00 0.00 3.41
1969 2071 2.636830 ACATACATGAAGCAGCAGTCC 58.363 47.619 0.00 0.00 0.00 3.85
1970 2078 4.409570 CAAACATACATGAAGCAGCAGTC 58.590 43.478 0.00 0.00 0.00 3.51
2293 2406 5.106594 GCCAAGTTGCCCAAATAAAAATCTG 60.107 40.000 0.00 0.00 0.00 2.90
2391 2508 3.581024 TGCAGCCAAAAGTGAATGATC 57.419 42.857 0.00 0.00 0.00 2.92
2406 2523 1.920574 CGACGGCTATGTATATGCAGC 59.079 52.381 0.00 0.00 0.00 5.25
2442 2559 9.605275 CTAGACAACAAATCCTTGAATATCAGA 57.395 33.333 0.00 0.00 36.33 3.27
2448 2565 8.237811 ACAAACTAGACAACAAATCCTTGAAT 57.762 30.769 0.00 0.00 36.33 2.57
2450 2567 7.639113 AACAAACTAGACAACAAATCCTTGA 57.361 32.000 0.00 0.00 36.33 3.02
2453 2570 7.339466 ACAGAAACAAACTAGACAACAAATCCT 59.661 33.333 0.00 0.00 0.00 3.24
2467 2584 7.489113 CAGAGCACATAAAAACAGAAACAAACT 59.511 33.333 0.00 0.00 0.00 2.66
2469 2586 7.542890 TCAGAGCACATAAAAACAGAAACAAA 58.457 30.769 0.00 0.00 0.00 2.83
2514 2631 3.044986 CAAGCATGTTTTCAGGTTGTCG 58.955 45.455 0.00 0.00 34.76 4.35
2740 2989 4.891168 AGTAAACAAATGTCGAAAACCCCT 59.109 37.500 0.00 0.00 0.00 4.79
2823 3072 8.680903 AGCTAGTTTTACGTACACTGTATGTAT 58.319 33.333 18.08 8.95 45.59 2.29
2859 3108 2.231478 GGAAAAAGGGGCTACAGAAAGC 59.769 50.000 0.00 0.00 41.99 3.51
2928 3177 6.554334 TTGAGCAACCAAACTGAACTATAC 57.446 37.500 0.00 0.00 0.00 1.47
2933 3183 7.437862 TCAAAATATTGAGCAACCAAACTGAAC 59.562 33.333 0.00 0.00 40.59 3.18
2982 3232 3.010027 TGCATAAGGGTTTCATCCACAGA 59.990 43.478 0.00 0.00 0.00 3.41
2983 3233 3.355378 TGCATAAGGGTTTCATCCACAG 58.645 45.455 0.00 0.00 0.00 3.66
2996 3246 3.605461 CGACGCAATGATTCTGCATAAGG 60.605 47.826 0.00 0.00 39.91 2.69
3000 3250 1.328680 GACGACGCAATGATTCTGCAT 59.671 47.619 0.00 0.00 39.91 3.96
3052 3303 7.524717 ACAAATAAACTGGCAAGTGTAGATT 57.475 32.000 0.00 0.00 36.51 2.40
3099 3350 8.204836 GTGGGTACAAATAGATCAGATAACAGT 58.795 37.037 0.00 0.00 0.00 3.55
3116 3367 4.513406 AGAAAAGGAACAGTGGGTACAA 57.487 40.909 0.00 0.00 0.00 2.41
3117 3368 4.080243 TGAAGAAAAGGAACAGTGGGTACA 60.080 41.667 0.00 0.00 0.00 2.90
3118 3369 4.457466 TGAAGAAAAGGAACAGTGGGTAC 58.543 43.478 0.00 0.00 0.00 3.34
3276 3528 6.202762 TGCATACTCGAATCAAAATCGCTAAT 59.797 34.615 0.00 0.00 40.04 1.73
3282 3534 8.847444 AAATTCTGCATACTCGAATCAAAATC 57.153 30.769 0.00 0.00 0.00 2.17
3355 3713 2.359107 CGTGGGTGTCATGCAGCT 60.359 61.111 15.51 0.00 44.46 4.24
3471 3832 8.897752 AGAGCCTGTCTAAATTAAAAGCATTAG 58.102 33.333 0.00 0.00 31.71 1.73
3517 3878 7.768120 GGATGATGTGATTCTCTTGTTCTACTT 59.232 37.037 0.00 0.00 0.00 2.24
3518 3879 7.125507 AGGATGATGTGATTCTCTTGTTCTACT 59.874 37.037 0.00 0.00 0.00 2.57
3547 3911 5.365403 TGAACATAAAAGGTTAACAGCCG 57.635 39.130 8.10 0.00 0.00 5.52
3568 3932 2.983136 CTCGCCTAGCTGAAATCGTATG 59.017 50.000 0.00 0.00 0.00 2.39
3648 4012 2.147150 GTCAGGTTCAGTCAAGGAAGC 58.853 52.381 0.00 0.00 41.72 3.86
3653 4017 1.071385 AGCCAGTCAGGTTCAGTCAAG 59.929 52.381 0.00 0.00 40.61 3.02
3655 4019 0.681733 GAGCCAGTCAGGTTCAGTCA 59.318 55.000 0.00 0.00 46.12 3.41
3675 4039 5.056480 TGGTAAGCAGATGATGGATAAACG 58.944 41.667 0.00 0.00 0.00 3.60
3680 4044 4.719026 ACATGGTAAGCAGATGATGGAT 57.281 40.909 0.00 0.00 0.00 3.41
3686 4050 4.517285 AGTGGTTACATGGTAAGCAGATG 58.483 43.478 18.11 0.00 35.88 2.90
3687 4051 4.844349 AGTGGTTACATGGTAAGCAGAT 57.156 40.909 18.11 9.64 35.88 2.90
3689 4053 5.705609 AAAAGTGGTTACATGGTAAGCAG 57.294 39.130 18.11 0.00 35.88 4.24
3696 4060 5.067273 TGACCTGTAAAAGTGGTTACATGG 58.933 41.667 0.00 5.53 41.80 3.66
3698 4062 6.539173 TCATGACCTGTAAAAGTGGTTACAT 58.461 36.000 0.00 0.00 41.80 2.29
3793 4157 7.687941 TTTCTGGAACATGGAGTAAATTCTC 57.312 36.000 0.00 0.00 38.20 2.87
3798 4162 7.595819 AACATTTTCTGGAACATGGAGTAAA 57.404 32.000 12.23 0.00 38.20 2.01
3803 4167 4.462483 GGCTAACATTTTCTGGAACATGGA 59.538 41.667 12.23 2.14 38.20 3.41
3912 4276 5.595542 ATGTCAACATGATATGGAAACAGGG 59.404 40.000 0.00 0.00 38.52 4.45
3922 4286 6.323739 GTGGGGGTTTAATGTCAACATGATAT 59.676 38.462 0.00 0.00 36.56 1.63
4093 4457 7.723324 TGTAGTTGCTTAGAACCATAGTATCC 58.277 38.462 0.00 0.00 0.00 2.59
4096 4460 7.283807 TCGATGTAGTTGCTTAGAACCATAGTA 59.716 37.037 0.00 0.00 0.00 1.82
4108 4472 6.201044 CGATAATTTCCTCGATGTAGTTGCTT 59.799 38.462 0.00 0.00 37.05 3.91
4168 4532 6.127366 GCTTCCCATTTTTGTATTCAGGATCA 60.127 38.462 0.00 0.00 0.00 2.92
4298 4664 5.107337 GCCAGTTTCTTGAAAAATGCTTAGC 60.107 40.000 0.00 0.00 0.00 3.09
4299 4665 5.406477 GGCCAGTTTCTTGAAAAATGCTTAG 59.594 40.000 0.00 0.00 0.00 2.18
4375 4744 7.773224 TGGCACACTATTTTAAGCATATGTACT 59.227 33.333 4.29 0.00 0.00 2.73
4376 4745 7.925993 TGGCACACTATTTTAAGCATATGTAC 58.074 34.615 4.29 0.00 0.00 2.90
4377 4746 7.773224 ACTGGCACACTATTTTAAGCATATGTA 59.227 33.333 4.29 0.00 0.00 2.29
4411 4784 3.624861 CAGTAGCATTCAAGTTAGCCTGG 59.375 47.826 0.00 0.00 0.00 4.45
4412 4785 4.256920 ACAGTAGCATTCAAGTTAGCCTG 58.743 43.478 0.00 0.00 0.00 4.85
4517 4890 4.649088 AGAACTTACTGGTTTTTGTGGC 57.351 40.909 0.00 0.00 0.00 5.01
4539 4912 3.721035 GAAAGGCACAAGCAAACTGAAT 58.279 40.909 0.00 0.00 44.61 2.57
4767 5144 5.972107 AAGTAGTGACCTAAACGCTCTTA 57.028 39.130 0.00 0.00 0.00 2.10
4845 5222 3.950395 AGGATAAGAACTTCTGCCAATGC 59.050 43.478 0.00 0.00 38.26 3.56
4851 5228 4.880696 AGCATCAAGGATAAGAACTTCTGC 59.119 41.667 0.00 0.00 34.80 4.26
5030 5411 2.978018 CTTGAAAAGGTCGGGCCGC 61.978 63.158 23.83 16.55 41.27 6.53
5075 5456 1.388547 GCCCGAACAGCAATATTCCA 58.611 50.000 0.00 0.00 0.00 3.53
5120 5501 5.213913 CATCATTTGCTATAGCCTTAGCG 57.786 43.478 21.84 6.02 46.15 4.26
5144 5525 1.378911 ATTGATGAAGCTGGCGCCA 60.379 52.632 30.59 30.59 36.60 5.69
5147 5528 1.329906 GAGACATTGATGAAGCTGGCG 59.670 52.381 0.00 0.00 0.00 5.69
5165 5546 3.934579 TCGATGTGATTGTGGACATTGAG 59.065 43.478 0.00 0.00 37.84 3.02
5261 5642 3.512329 TGCTATCTACCTCGTCCACAAAA 59.488 43.478 0.00 0.00 0.00 2.44
5270 5651 2.289072 CCCCAACATGCTATCTACCTCG 60.289 54.545 0.00 0.00 0.00 4.63
5453 5841 0.593128 GCATTTGAACAGACCTGCGT 59.407 50.000 0.00 0.00 0.00 5.24
5478 5866 7.869937 CACTACTATCTATTCTCCACCAACATG 59.130 40.741 0.00 0.00 0.00 3.21
5479 5867 7.565398 ACACTACTATCTATTCTCCACCAACAT 59.435 37.037 0.00 0.00 0.00 2.71
5481 5869 7.203910 CACACTACTATCTATTCTCCACCAAC 58.796 42.308 0.00 0.00 0.00 3.77
5482 5870 6.323996 CCACACTACTATCTATTCTCCACCAA 59.676 42.308 0.00 0.00 0.00 3.67
5483 5871 5.833667 CCACACTACTATCTATTCTCCACCA 59.166 44.000 0.00 0.00 0.00 4.17
5485 5873 6.963083 ACCACACTACTATCTATTCTCCAC 57.037 41.667 0.00 0.00 0.00 4.02
5486 5874 6.895756 ACAACCACACTACTATCTATTCTCCA 59.104 38.462 0.00 0.00 0.00 3.86
5487 5875 7.349412 ACAACCACACTACTATCTATTCTCC 57.651 40.000 0.00 0.00 0.00 3.71
5498 5886 4.041567 TCATCATCCAACAACCACACTACT 59.958 41.667 0.00 0.00 0.00 2.57
5590 5978 6.859112 ACTGTCCTTAAAATCAGCTCTCTA 57.141 37.500 0.00 0.00 0.00 2.43
5742 6138 6.528321 ACTTTCAGTGATTCAGTCAGATTGA 58.472 36.000 0.00 0.00 37.56 2.57
5743 6139 6.798315 ACTTTCAGTGATTCAGTCAGATTG 57.202 37.500 0.00 0.00 37.56 2.67
5744 6140 6.769822 ACAACTTTCAGTGATTCAGTCAGATT 59.230 34.615 0.00 0.00 37.56 2.40
5773 6169 3.966665 AGATTCTGGGTGCAAAAGGAAAA 59.033 39.130 0.00 0.00 0.00 2.29
5802 6198 1.509463 CGGTCGGTAAGCAGCTGTA 59.491 57.895 16.64 0.00 0.00 2.74
5832 6228 7.046033 TCTCTTTCAACCGTTCTTTCTTAAGT 58.954 34.615 1.63 0.00 32.98 2.24
5835 6231 6.426937 CCATCTCTTTCAACCGTTCTTTCTTA 59.573 38.462 0.00 0.00 0.00 2.10
5873 6270 9.346725 GTAAATGCTTAGGAAAGAAGACATTTG 57.653 33.333 17.90 0.00 38.95 2.32
5888 6483 8.882736 TCATCACACACTTATGTAAATGCTTAG 58.117 33.333 0.00 0.00 36.72 2.18
5900 6495 5.942236 AGCATCAAAGTCATCACACACTTAT 59.058 36.000 0.00 0.00 32.36 1.73
5958 6563 4.255833 TGGGATGTTCAGAACAATTTGC 57.744 40.909 19.92 8.99 45.86 3.68
5967 6572 4.858850 ACAAGCATTATGGGATGTTCAGA 58.141 39.130 0.00 0.00 0.00 3.27
6022 6627 1.636570 GCTTCGCCTCCGTTTTCCTC 61.637 60.000 0.00 0.00 35.54 3.71
6223 6837 0.331616 TCAGGTCCTCCATCGTCAGA 59.668 55.000 0.00 0.00 35.89 3.27
6300 6916 3.055094 AGTGGCCTCGTTCTATCAATGTT 60.055 43.478 3.32 0.00 0.00 2.71
6301 6917 2.501723 AGTGGCCTCGTTCTATCAATGT 59.498 45.455 3.32 0.00 0.00 2.71
6402 7019 1.001764 TCCTTCGCCGTAGAGGTCA 60.002 57.895 0.00 0.00 43.70 4.02
6465 7082 3.896888 ACACAACACATCCACCATCATTT 59.103 39.130 0.00 0.00 0.00 2.32
6468 7085 2.622470 CAACACAACACATCCACCATCA 59.378 45.455 0.00 0.00 0.00 3.07
6528 7151 2.689983 CTCCTTTCCCACCAACATATGC 59.310 50.000 1.58 0.00 0.00 3.14
6552 7176 1.177401 GGTTGCTCACAGGAAATCCC 58.823 55.000 0.00 0.00 36.42 3.85
6703 7781 9.851686 TGCTAAAATTCAATCCAGATATACACT 57.148 29.630 0.00 0.00 0.00 3.55
6835 7914 7.182761 CGACTCACAATGAACATTCTTTATCC 58.817 38.462 0.00 0.00 0.00 2.59
6987 8082 8.458573 AGTGGACAATGTGTAGTATTCAAAAA 57.541 30.769 0.00 0.00 0.00 1.94
6990 8085 8.458573 AAAAGTGGACAATGTGTAGTATTCAA 57.541 30.769 0.00 0.00 0.00 2.69
6991 8086 7.095397 CGAAAAGTGGACAATGTGTAGTATTCA 60.095 37.037 0.00 0.00 0.00 2.57
6992 8087 7.117236 TCGAAAAGTGGACAATGTGTAGTATTC 59.883 37.037 0.00 0.00 0.00 1.75
6995 8090 5.845103 TCGAAAAGTGGACAATGTGTAGTA 58.155 37.500 0.00 0.00 0.00 1.82
6996 8091 4.699637 TCGAAAAGTGGACAATGTGTAGT 58.300 39.130 0.00 0.00 0.00 2.73
6997 8092 5.666969 TTCGAAAAGTGGACAATGTGTAG 57.333 39.130 0.00 0.00 0.00 2.74
7004 8102 6.261158 TCAATGTGTATTCGAAAAGTGGACAA 59.739 34.615 0.00 0.00 0.00 3.18
7016 8114 7.581476 ACTAAAACCTGTTCAATGTGTATTCG 58.419 34.615 0.00 0.00 0.00 3.34
7059 8159 4.380531 ACAACAGTGTGAAGGTGTATCTG 58.619 43.478 0.00 0.00 36.31 2.90
7115 8215 7.491048 ACAAGCTGTGTTAAAAATTGTTCGAAT 59.509 29.630 0.00 0.00 37.01 3.34
7136 8236 6.477688 AGCATGTATATGAAAAATGCACAAGC 59.522 34.615 3.28 0.00 44.76 4.01
7142 8242 7.175641 AGGGAGTAGCATGTATATGAAAAATGC 59.824 37.037 3.28 0.00 43.10 3.56
7176 8276 6.306837 CAGCTGTTCAAAACGTCTTACAAAAA 59.693 34.615 5.25 0.00 0.00 1.94
7177 8277 5.797934 CAGCTGTTCAAAACGTCTTACAAAA 59.202 36.000 5.25 0.00 0.00 2.44
7178 8278 5.122554 TCAGCTGTTCAAAACGTCTTACAAA 59.877 36.000 14.67 0.00 0.00 2.83
7180 8280 4.033587 GTCAGCTGTTCAAAACGTCTTACA 59.966 41.667 14.67 0.00 0.00 2.41
7181 8281 4.033587 TGTCAGCTGTTCAAAACGTCTTAC 59.966 41.667 14.67 0.00 0.00 2.34
7183 8283 3.006940 TGTCAGCTGTTCAAAACGTCTT 58.993 40.909 14.67 0.00 0.00 3.01
7186 8286 2.095853 CAGTGTCAGCTGTTCAAAACGT 59.904 45.455 14.67 0.00 0.00 3.99
7187 8287 2.351418 TCAGTGTCAGCTGTTCAAAACG 59.649 45.455 14.67 4.59 37.70 3.60
7188 8288 4.098416 GTTCAGTGTCAGCTGTTCAAAAC 58.902 43.478 14.67 13.92 37.70 2.43
7191 8291 3.266510 AGTTCAGTGTCAGCTGTTCAA 57.733 42.857 14.67 0.00 37.70 2.69
7193 8293 5.334414 CCAAATAGTTCAGTGTCAGCTGTTC 60.334 44.000 14.67 9.03 37.70 3.18
7196 8296 4.318332 TCCAAATAGTTCAGTGTCAGCTG 58.682 43.478 7.63 7.63 37.81 4.24
7198 8298 3.126000 GCTCCAAATAGTTCAGTGTCAGC 59.874 47.826 0.00 0.00 0.00 4.26
7199 8299 3.369147 CGCTCCAAATAGTTCAGTGTCAG 59.631 47.826 0.00 0.00 0.00 3.51
7203 8303 3.935203 ACATCGCTCCAAATAGTTCAGTG 59.065 43.478 0.00 0.00 0.00 3.66
7204 8304 4.081420 AGACATCGCTCCAAATAGTTCAGT 60.081 41.667 0.00 0.00 0.00 3.41
7205 8305 4.269603 CAGACATCGCTCCAAATAGTTCAG 59.730 45.833 0.00 0.00 0.00 3.02
7206 8306 4.081697 TCAGACATCGCTCCAAATAGTTCA 60.082 41.667 0.00 0.00 0.00 3.18
7207 8307 4.433615 TCAGACATCGCTCCAAATAGTTC 58.566 43.478 0.00 0.00 0.00 3.01
7208 8308 4.471904 TCAGACATCGCTCCAAATAGTT 57.528 40.909 0.00 0.00 0.00 2.24
7209 8309 4.471904 TTCAGACATCGCTCCAAATAGT 57.528 40.909 0.00 0.00 0.00 2.12
7210 8310 5.295292 ACAATTCAGACATCGCTCCAAATAG 59.705 40.000 0.00 0.00 0.00 1.73
7211 8311 5.185454 ACAATTCAGACATCGCTCCAAATA 58.815 37.500 0.00 0.00 0.00 1.40
7212 8312 4.012374 ACAATTCAGACATCGCTCCAAAT 58.988 39.130 0.00 0.00 0.00 2.32
7213 8313 3.411446 ACAATTCAGACATCGCTCCAAA 58.589 40.909 0.00 0.00 0.00 3.28
7214 8314 3.002791 GACAATTCAGACATCGCTCCAA 58.997 45.455 0.00 0.00 0.00 3.53
7215 8315 2.234661 AGACAATTCAGACATCGCTCCA 59.765 45.455 0.00 0.00 0.00 3.86
7216 8316 2.898705 AGACAATTCAGACATCGCTCC 58.101 47.619 0.00 0.00 0.00 4.70
7217 8317 5.499334 CGTTTAGACAATTCAGACATCGCTC 60.499 44.000 0.00 0.00 0.00 5.03
7218 8318 4.327357 CGTTTAGACAATTCAGACATCGCT 59.673 41.667 0.00 0.00 0.00 4.93
7219 8319 4.091509 ACGTTTAGACAATTCAGACATCGC 59.908 41.667 0.00 0.00 0.00 4.58
7220 8320 5.573282 AGACGTTTAGACAATTCAGACATCG 59.427 40.000 0.00 0.00 0.00 3.84
7221 8321 6.952935 AGACGTTTAGACAATTCAGACATC 57.047 37.500 0.00 0.00 0.00 3.06
7223 8323 9.917129 TTATAAGACGTTTAGACAATTCAGACA 57.083 29.630 0.00 0.00 0.00 3.41
7232 8332 9.531942 TGTTCACTTTTATAAGACGTTTAGACA 57.468 29.630 0.00 0.00 35.30 3.41
7234 8334 9.970395 TCTGTTCACTTTTATAAGACGTTTAGA 57.030 29.630 0.00 0.00 35.30 2.10
7236 8336 9.199982 CCTCTGTTCACTTTTATAAGACGTTTA 57.800 33.333 0.00 0.00 35.30 2.01
7237 8337 7.172703 CCCTCTGTTCACTTTTATAAGACGTTT 59.827 37.037 0.00 0.00 35.30 3.60
7238 8338 6.649557 CCCTCTGTTCACTTTTATAAGACGTT 59.350 38.462 0.00 0.00 35.30 3.99
7239 8339 6.014840 TCCCTCTGTTCACTTTTATAAGACGT 60.015 38.462 0.00 0.00 35.30 4.34
7240 8340 6.395629 TCCCTCTGTTCACTTTTATAAGACG 58.604 40.000 0.00 0.00 35.30 4.18
7241 8341 7.387643 ACTCCCTCTGTTCACTTTTATAAGAC 58.612 38.462 0.00 0.00 35.30 3.01
7242 8342 7.554959 ACTCCCTCTGTTCACTTTTATAAGA 57.445 36.000 0.00 0.00 35.30 2.10
7243 8343 9.152595 GTTACTCCCTCTGTTCACTTTTATAAG 57.847 37.037 0.00 0.00 37.40 1.73
7244 8344 8.653191 TGTTACTCCCTCTGTTCACTTTTATAA 58.347 33.333 0.00 0.00 0.00 0.98
7245 8345 8.197592 TGTTACTCCCTCTGTTCACTTTTATA 57.802 34.615 0.00 0.00 0.00 0.98
7246 8346 7.074653 TGTTACTCCCTCTGTTCACTTTTAT 57.925 36.000 0.00 0.00 0.00 1.40
7247 8347 6.488769 TGTTACTCCCTCTGTTCACTTTTA 57.511 37.500 0.00 0.00 0.00 1.52
7248 8348 5.367945 TGTTACTCCCTCTGTTCACTTTT 57.632 39.130 0.00 0.00 0.00 2.27
7249 8349 5.568620 ATGTTACTCCCTCTGTTCACTTT 57.431 39.130 0.00 0.00 0.00 2.66
7250 8350 5.568620 AATGTTACTCCCTCTGTTCACTT 57.431 39.130 0.00 0.00 0.00 3.16
7251 8351 5.568620 AAATGTTACTCCCTCTGTTCACT 57.431 39.130 0.00 0.00 0.00 3.41
7252 8352 6.635030 AAAAATGTTACTCCCTCTGTTCAC 57.365 37.500 0.00 0.00 0.00 3.18
7328 8435 8.999220 AAAAATGTTTGCACCATTCAAATTTT 57.001 23.077 10.37 5.56 36.06 1.82
7330 8437 7.769220 TGAAAAATGTTTGCACCATTCAAATT 58.231 26.923 10.37 5.33 36.06 1.82
7335 8442 6.258507 AGTTCTGAAAAATGTTTGCACCATTC 59.741 34.615 10.37 2.13 31.49 2.67
7361 8470 1.976045 GTGTAAAATTTGTGCTCGGCG 59.024 47.619 0.00 0.00 0.00 6.46
7367 8476 6.148948 TGCTCATGTAGTGTAAAATTTGTGC 58.851 36.000 0.00 0.00 0.00 4.57
7398 8507 6.359617 CGCTTCATTAAGAAAATCACACGTTT 59.640 34.615 0.00 0.00 35.40 3.60
7401 8510 5.617609 TCGCTTCATTAAGAAAATCACACG 58.382 37.500 0.00 0.00 35.40 4.49
7402 8511 6.855914 TGTTCGCTTCATTAAGAAAATCACAC 59.144 34.615 0.00 0.00 35.40 3.82
7403 8512 6.964908 TGTTCGCTTCATTAAGAAAATCACA 58.035 32.000 0.00 0.00 35.40 3.58
7407 8516 8.816640 AACAATGTTCGCTTCATTAAGAAAAT 57.183 26.923 0.00 0.00 35.40 1.82
7412 8521 6.577055 TCGAAAACAATGTTCGCTTCATTAAG 59.423 34.615 0.00 0.00 45.79 1.85
7414 8523 5.991568 TCGAAAACAATGTTCGCTTCATTA 58.008 33.333 0.00 0.00 45.79 1.90
7415 8524 4.854399 TCGAAAACAATGTTCGCTTCATT 58.146 34.783 0.00 0.00 45.79 2.57
7416 8525 4.481930 TCGAAAACAATGTTCGCTTCAT 57.518 36.364 0.00 0.00 45.79 2.57
7417 8526 3.953874 TCGAAAACAATGTTCGCTTCA 57.046 38.095 0.00 0.00 45.79 3.02
7418 8527 4.733405 ACTTTCGAAAACAATGTTCGCTTC 59.267 37.500 12.41 0.00 45.79 3.86
7419 8528 4.668289 ACTTTCGAAAACAATGTTCGCTT 58.332 34.783 12.41 0.00 45.79 4.68
7420 8529 4.287238 ACTTTCGAAAACAATGTTCGCT 57.713 36.364 12.41 0.00 45.79 4.93
7421 8530 4.965158 TGTACTTTCGAAAACAATGTTCGC 59.035 37.500 12.41 0.00 45.79 4.70
7423 8532 8.164058 TGTTTGTACTTTCGAAAACAATGTTC 57.836 30.769 22.27 15.34 39.02 3.18
7541 8650 5.342866 AGGAATGGAGGGAGTATATGGTAC 58.657 45.833 0.00 0.00 0.00 3.34
7544 8653 6.952605 TTTAGGAATGGAGGGAGTATATGG 57.047 41.667 0.00 0.00 0.00 2.74
7548 8657 9.860393 ACTTATATTTAGGAATGGAGGGAGTAT 57.140 33.333 0.00 0.00 0.00 2.12
7549 8658 9.322769 GACTTATATTTAGGAATGGAGGGAGTA 57.677 37.037 0.00 0.00 0.00 2.59
7550 8659 8.019652 AGACTTATATTTAGGAATGGAGGGAGT 58.980 37.037 0.00 0.00 0.00 3.85
7551 8660 8.442660 AGACTTATATTTAGGAATGGAGGGAG 57.557 38.462 0.00 0.00 0.00 4.30
7552 8661 8.814448 AAGACTTATATTTAGGAATGGAGGGA 57.186 34.615 0.00 0.00 0.00 4.20
7553 8662 9.868160 AAAAGACTTATATTTAGGAATGGAGGG 57.132 33.333 0.00 0.00 0.00 4.30
7587 8696 3.367321 TCCGTGTGTAGTCCATAATGGA 58.633 45.455 0.00 0.00 45.98 3.41
7588 8697 3.717707 CTCCGTGTGTAGTCCATAATGG 58.282 50.000 0.00 0.00 39.43 3.16
7589 8698 3.123804 GCTCCGTGTGTAGTCCATAATG 58.876 50.000 0.00 0.00 0.00 1.90
7590 8699 2.764010 TGCTCCGTGTGTAGTCCATAAT 59.236 45.455 0.00 0.00 0.00 1.28
7591 8700 2.172679 TGCTCCGTGTGTAGTCCATAA 58.827 47.619 0.00 0.00 0.00 1.90
7592 8701 1.842052 TGCTCCGTGTGTAGTCCATA 58.158 50.000 0.00 0.00 0.00 2.74
7593 8702 0.973632 TTGCTCCGTGTGTAGTCCAT 59.026 50.000 0.00 0.00 0.00 3.41
7594 8703 0.753867 TTTGCTCCGTGTGTAGTCCA 59.246 50.000 0.00 0.00 0.00 4.02
7595 8704 1.873698 TTTTGCTCCGTGTGTAGTCC 58.126 50.000 0.00 0.00 0.00 3.85
7596 8705 3.064207 TCATTTTGCTCCGTGTGTAGTC 58.936 45.455 0.00 0.00 0.00 2.59
7597 8706 3.067106 CTCATTTTGCTCCGTGTGTAGT 58.933 45.455 0.00 0.00 0.00 2.73
7598 8707 2.159653 GCTCATTTTGCTCCGTGTGTAG 60.160 50.000 0.00 0.00 0.00 2.74
7599 8708 1.804151 GCTCATTTTGCTCCGTGTGTA 59.196 47.619 0.00 0.00 0.00 2.90
7600 8709 0.593128 GCTCATTTTGCTCCGTGTGT 59.407 50.000 0.00 0.00 0.00 3.72
7601 8710 0.453282 CGCTCATTTTGCTCCGTGTG 60.453 55.000 0.00 0.00 0.00 3.82
7602 8711 0.602638 TCGCTCATTTTGCTCCGTGT 60.603 50.000 0.00 0.00 0.00 4.49
7603 8712 0.516877 TTCGCTCATTTTGCTCCGTG 59.483 50.000 0.00 0.00 0.00 4.94
7604 8713 1.398390 GATTCGCTCATTTTGCTCCGT 59.602 47.619 0.00 0.00 0.00 4.69
7605 8714 1.667724 AGATTCGCTCATTTTGCTCCG 59.332 47.619 0.00 0.00 0.00 4.63
7606 8715 5.698545 AGTATAGATTCGCTCATTTTGCTCC 59.301 40.000 0.00 0.00 0.00 4.70
7607 8716 6.644592 AGAGTATAGATTCGCTCATTTTGCTC 59.355 38.462 0.00 0.00 0.00 4.26
7608 8717 6.520272 AGAGTATAGATTCGCTCATTTTGCT 58.480 36.000 0.00 0.00 0.00 3.91
7609 8718 6.777526 AGAGTATAGATTCGCTCATTTTGC 57.222 37.500 0.00 0.00 0.00 3.68
7678 8787 7.991460 CCTCCGTCCCTAAATATAAGTCTTTTT 59.009 37.037 0.00 0.00 0.00 1.94
7679 8788 7.419865 CCCTCCGTCCCTAAATATAAGTCTTTT 60.420 40.741 0.00 0.00 0.00 2.27
7680 8789 6.042897 CCCTCCGTCCCTAAATATAAGTCTTT 59.957 42.308 0.00 0.00 0.00 2.52
7681 8790 5.543020 CCCTCCGTCCCTAAATATAAGTCTT 59.457 44.000 0.00 0.00 0.00 3.01
7682 8791 5.085219 CCCTCCGTCCCTAAATATAAGTCT 58.915 45.833 0.00 0.00 0.00 3.24
7683 8792 5.082425 TCCCTCCGTCCCTAAATATAAGTC 58.918 45.833 0.00 0.00 0.00 3.01
7684 8793 5.083953 TCCCTCCGTCCCTAAATATAAGT 57.916 43.478 0.00 0.00 0.00 2.24
7685 8794 6.622427 ATTCCCTCCGTCCCTAAATATAAG 57.378 41.667 0.00 0.00 0.00 1.73
7686 8795 7.681168 ACATATTCCCTCCGTCCCTAAATATAA 59.319 37.037 0.00 0.00 0.00 0.98
7687 8796 7.194050 ACATATTCCCTCCGTCCCTAAATATA 58.806 38.462 0.00 0.00 0.00 0.86
7688 8797 6.030082 ACATATTCCCTCCGTCCCTAAATAT 58.970 40.000 0.00 0.00 0.00 1.28
7689 8798 5.408824 ACATATTCCCTCCGTCCCTAAATA 58.591 41.667 0.00 0.00 0.00 1.40
7690 8799 4.240323 ACATATTCCCTCCGTCCCTAAAT 58.760 43.478 0.00 0.00 0.00 1.40
7691 8800 3.660959 ACATATTCCCTCCGTCCCTAAA 58.339 45.455 0.00 0.00 0.00 1.85
7692 8801 3.339713 ACATATTCCCTCCGTCCCTAA 57.660 47.619 0.00 0.00 0.00 2.69
7693 8802 4.294168 AGATACATATTCCCTCCGTCCCTA 59.706 45.833 0.00 0.00 0.00 3.53
7694 8803 3.077695 AGATACATATTCCCTCCGTCCCT 59.922 47.826 0.00 0.00 0.00 4.20
7695 8804 3.442076 AGATACATATTCCCTCCGTCCC 58.558 50.000 0.00 0.00 0.00 4.46
7696 8805 7.061688 AGTATAGATACATATTCCCTCCGTCC 58.938 42.308 2.66 0.00 35.74 4.79
7697 8806 8.522542 AAGTATAGATACATATTCCCTCCGTC 57.477 38.462 2.66 0.00 35.74 4.79
7698 8807 8.896722 AAAGTATAGATACATATTCCCTCCGT 57.103 34.615 2.66 0.00 35.74 4.69
7757 8897 8.694394 CAATTCGAGGATTCTTGTTTTTCTTTC 58.306 33.333 0.00 0.00 0.00 2.62
7762 8902 9.810545 TTTTACAATTCGAGGATTCTTGTTTTT 57.189 25.926 0.00 0.00 32.66 1.94
7816 8957 1.797025 ACCAAGAACTCGTAAGCAGC 58.203 50.000 0.00 0.00 37.18 5.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.