Multiple sequence alignment - TraesCS1A01G420700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G420700 chr1A 100.000 3152 0 0 1 3152 577277017 577273866 0.000000e+00 5821.0
1 TraesCS1A01G420700 chr1B 93.373 1675 83 17 578 2239 669023954 669022295 0.000000e+00 2453.0
2 TraesCS1A01G420700 chr1B 90.972 144 12 1 2673 2816 631811684 631811542 3.210000e-45 193.0
3 TraesCS1A01G420700 chr1B 91.304 115 6 3 164 276 669024235 669024123 1.510000e-33 154.0
4 TraesCS1A01G420700 chr1D 92.853 1651 87 18 578 2216 480761747 480760116 0.000000e+00 2366.0
5 TraesCS1A01G420700 chr1D 81.525 341 24 11 1 336 480762273 480761967 8.730000e-61 244.0
6 TraesCS1A01G420700 chrUn 93.168 483 28 3 2675 3152 331424800 331424318 0.000000e+00 704.0
7 TraesCS1A01G420700 chrUn 93.066 274 14 3 2884 3152 68579536 68579263 2.280000e-106 396.0
8 TraesCS1A01G420700 chrUn 93.130 262 13 3 2896 3152 392215872 392216133 2.290000e-101 379.0
9 TraesCS1A01G420700 chrUn 94.872 156 8 0 2675 2830 68579690 68579535 8.730000e-61 244.0
10 TraesCS1A01G420700 chr7D 92.975 484 30 3 2671 3152 615557306 615557787 0.000000e+00 702.0
11 TraesCS1A01G420700 chr3D 91.284 436 29 3 2719 3152 307061972 307062400 1.260000e-163 586.0
12 TraesCS1A01G420700 chr3D 94.643 56 2 1 3077 3132 609507328 609507274 5.600000e-13 86.1
13 TraesCS1A01G420700 chr2D 93.732 351 20 1 2673 3021 620907324 620907674 2.780000e-145 525.0
14 TraesCS1A01G420700 chr2D 93.878 147 9 0 3006 3152 620909051 620909197 4.090000e-54 222.0
15 TraesCS1A01G420700 chr6A 83.096 491 59 9 2672 3152 518774247 518774723 2.910000e-115 425.0
16 TraesCS1A01G420700 chr6A 81.352 488 67 12 2675 3152 563250025 563249552 2.970000e-100 375.0
17 TraesCS1A01G420700 chr4A 82.270 423 58 11 2670 3081 625105275 625104859 1.800000e-92 350.0
18 TraesCS1A01G420700 chr2B 89.655 203 13 4 2706 2900 235905708 235905910 5.220000e-63 252.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G420700 chr1A 577273866 577277017 3151 True 5821.0 5821 100.0000 1 3152 1 chr1A.!!$R1 3151
1 TraesCS1A01G420700 chr1B 669022295 669024235 1940 True 1303.5 2453 92.3385 164 2239 2 chr1B.!!$R2 2075
2 TraesCS1A01G420700 chr1D 480760116 480762273 2157 True 1305.0 2366 87.1890 1 2216 2 chr1D.!!$R1 2215
3 TraesCS1A01G420700 chr2D 620907324 620909197 1873 False 373.5 525 93.8050 2673 3152 2 chr2D.!!$F1 479

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
371 382 0.452950 CGTCGTCGACCTTGAGTCAG 60.453 60.0 19.29 0.0 46.69 3.51 F
372 383 0.592148 GTCGTCGACCTTGAGTCAGT 59.408 55.0 14.60 0.0 46.69 3.41 F
535 549 0.827507 ATGCTTGACGGCCCTTTGTT 60.828 50.0 0.00 0.0 0.00 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1714 1799 0.040646 ACTCCACCATGGACTCCGTA 59.959 55.0 21.47 0.0 42.67 4.02 R
2129 2216 0.104120 CCACTCACCGATAATGGCGA 59.896 55.0 0.00 0.0 0.00 5.54 R
2503 2590 0.867746 TGTCAGACAATCTGCAACGC 59.132 50.0 0.00 0.0 43.95 4.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 9.814507 GACTACAATATACTAGTTGATGACTCG 57.185 37.037 0.00 0.00 39.86 4.18
118 119 1.153823 CCGAGACACATGGGACGAC 60.154 63.158 0.00 0.00 0.00 4.34
119 120 1.153823 CGAGACACATGGGACGACC 60.154 63.158 0.00 0.00 40.81 4.79
120 121 1.153823 GAGACACATGGGACGACCG 60.154 63.158 0.00 0.00 44.64 4.79
122 123 2.602267 ACACATGGGACGACCGGA 60.602 61.111 9.46 0.00 44.64 5.14
123 124 2.125673 CACATGGGACGACCGGAC 60.126 66.667 9.46 0.00 44.64 4.79
124 125 3.755628 ACATGGGACGACCGGACG 61.756 66.667 24.38 24.38 44.64 4.79
125 126 3.445687 CATGGGACGACCGGACGA 61.446 66.667 31.92 10.67 44.64 4.20
126 127 3.138798 ATGGGACGACCGGACGAG 61.139 66.667 31.92 10.73 44.64 4.18
127 128 3.933048 ATGGGACGACCGGACGAGT 62.933 63.158 31.92 11.44 44.64 4.18
128 129 2.436646 GGGACGACCGGACGAGTA 60.437 66.667 31.92 0.00 36.97 2.59
129 130 2.467826 GGGACGACCGGACGAGTAG 61.468 68.421 31.92 3.68 36.97 2.57
130 131 1.743252 GGACGACCGGACGAGTAGT 60.743 63.158 31.92 9.83 37.03 2.73
131 132 0.460284 GGACGACCGGACGAGTAGTA 60.460 60.000 31.92 0.00 37.03 1.82
132 133 1.576356 GACGACCGGACGAGTAGTAT 58.424 55.000 31.92 8.24 37.03 2.12
133 134 1.936547 GACGACCGGACGAGTAGTATT 59.063 52.381 31.92 7.44 37.03 1.89
134 135 3.123804 GACGACCGGACGAGTAGTATTA 58.876 50.000 31.92 0.00 37.03 0.98
135 136 3.733337 ACGACCGGACGAGTAGTATTAT 58.267 45.455 31.92 3.02 37.03 1.28
136 137 3.743396 ACGACCGGACGAGTAGTATTATC 59.257 47.826 31.92 0.78 37.03 1.75
137 138 3.124297 CGACCGGACGAGTAGTATTATCC 59.876 52.174 21.84 0.00 35.09 2.59
138 139 4.322567 GACCGGACGAGTAGTATTATCCT 58.677 47.826 9.46 0.00 0.00 3.24
139 140 4.723309 ACCGGACGAGTAGTATTATCCTT 58.277 43.478 9.46 0.00 0.00 3.36
140 141 4.759183 ACCGGACGAGTAGTATTATCCTTC 59.241 45.833 9.46 0.00 0.00 3.46
141 142 4.758674 CCGGACGAGTAGTATTATCCTTCA 59.241 45.833 0.00 0.00 0.00 3.02
142 143 5.240183 CCGGACGAGTAGTATTATCCTTCAA 59.760 44.000 0.00 0.00 0.00 2.69
143 144 6.141462 CGGACGAGTAGTATTATCCTTCAAC 58.859 44.000 0.00 0.00 0.00 3.18
144 145 6.445475 GGACGAGTAGTATTATCCTTCAACC 58.555 44.000 0.00 0.00 0.00 3.77
145 146 6.040166 GGACGAGTAGTATTATCCTTCAACCA 59.960 42.308 0.00 0.00 0.00 3.67
146 147 7.040473 ACGAGTAGTATTATCCTTCAACCAG 57.960 40.000 0.00 0.00 0.00 4.00
147 148 6.606395 ACGAGTAGTATTATCCTTCAACCAGT 59.394 38.462 0.00 0.00 0.00 4.00
148 149 7.776969 ACGAGTAGTATTATCCTTCAACCAGTA 59.223 37.037 0.00 0.00 0.00 2.74
149 150 8.291032 CGAGTAGTATTATCCTTCAACCAGTAG 58.709 40.741 0.00 0.00 0.00 2.57
150 151 9.134055 GAGTAGTATTATCCTTCAACCAGTAGT 57.866 37.037 0.00 0.00 0.00 2.73
151 152 8.915036 AGTAGTATTATCCTTCAACCAGTAGTG 58.085 37.037 0.00 0.00 0.00 2.74
152 153 6.583562 AGTATTATCCTTCAACCAGTAGTGC 58.416 40.000 0.00 0.00 0.00 4.40
162 163 4.087892 AGTAGTGCAGGCTGGGCG 62.088 66.667 17.64 0.00 0.00 6.13
216 222 8.214721 TCATGCTAATCGACTGGATATACTAG 57.785 38.462 0.00 0.00 34.08 2.57
272 283 4.404073 TGAAGATCTACTCCAGCTCCTTTC 59.596 45.833 0.00 0.00 0.00 2.62
282 293 5.249393 ACTCCAGCTCCTTTCAAGATCTTAA 59.751 40.000 7.86 0.00 0.00 1.85
290 301 7.390718 GCTCCTTTCAAGATCTTAAGTTTGGTA 59.609 37.037 7.86 0.00 0.00 3.25
291 302 8.617290 TCCTTTCAAGATCTTAAGTTTGGTAC 57.383 34.615 7.86 0.00 0.00 3.34
292 303 7.386848 TCCTTTCAAGATCTTAAGTTTGGTACG 59.613 37.037 7.86 0.00 0.00 3.67
293 304 7.172703 CCTTTCAAGATCTTAAGTTTGGTACGT 59.827 37.037 7.86 0.00 0.00 3.57
294 305 9.199982 CTTTCAAGATCTTAAGTTTGGTACGTA 57.800 33.333 7.86 0.00 0.00 3.57
305 316 6.431198 AGTTTGGTACGTATATGCTTTTGG 57.569 37.500 0.00 0.00 0.00 3.28
318 329 3.761897 TGCTTTTGGTTAGCCAGTATGT 58.238 40.909 0.00 0.00 46.91 2.29
321 332 2.869101 TTGGTTAGCCAGTATGTGCA 57.131 45.000 0.00 0.00 46.91 4.57
326 337 2.614057 GTTAGCCAGTATGTGCATGTCC 59.386 50.000 0.00 0.00 35.20 4.02
336 347 2.172679 TGTGCATGTCCAATGATGCTT 58.827 42.857 0.00 0.00 44.46 3.91
337 348 2.094442 TGTGCATGTCCAATGATGCTTG 60.094 45.455 0.00 0.00 44.46 4.01
338 349 2.164827 GTGCATGTCCAATGATGCTTGA 59.835 45.455 0.00 0.00 44.46 3.02
339 350 2.826725 TGCATGTCCAATGATGCTTGAA 59.173 40.909 0.00 0.00 44.46 2.69
340 351 3.184541 GCATGTCCAATGATGCTTGAAC 58.815 45.455 0.00 0.00 41.52 3.18
341 352 3.777478 CATGTCCAATGATGCTTGAACC 58.223 45.455 0.00 0.00 0.00 3.62
342 353 3.159213 TGTCCAATGATGCTTGAACCT 57.841 42.857 0.00 0.00 0.00 3.50
343 354 2.821378 TGTCCAATGATGCTTGAACCTG 59.179 45.455 0.00 0.00 0.00 4.00
344 355 2.821969 GTCCAATGATGCTTGAACCTGT 59.178 45.455 0.00 0.00 0.00 4.00
345 356 3.084039 TCCAATGATGCTTGAACCTGTC 58.916 45.455 0.00 0.00 0.00 3.51
346 357 2.165030 CCAATGATGCTTGAACCTGTCC 59.835 50.000 0.00 0.00 0.00 4.02
347 358 3.087031 CAATGATGCTTGAACCTGTCCT 58.913 45.455 0.00 0.00 0.00 3.85
348 359 4.264253 CAATGATGCTTGAACCTGTCCTA 58.736 43.478 0.00 0.00 0.00 2.94
349 360 3.616956 TGATGCTTGAACCTGTCCTAG 57.383 47.619 0.00 0.00 0.00 3.02
350 361 2.284190 GATGCTTGAACCTGTCCTAGC 58.716 52.381 0.00 0.00 34.87 3.42
351 362 1.055849 TGCTTGAACCTGTCCTAGCA 58.944 50.000 0.00 0.00 39.35 3.49
352 363 1.270839 TGCTTGAACCTGTCCTAGCAC 60.271 52.381 0.00 0.00 37.75 4.40
353 364 1.714794 CTTGAACCTGTCCTAGCACG 58.285 55.000 0.00 0.00 0.00 5.34
354 365 1.000955 CTTGAACCTGTCCTAGCACGT 59.999 52.381 0.00 0.00 0.00 4.49
355 366 0.601558 TGAACCTGTCCTAGCACGTC 59.398 55.000 0.00 0.00 0.00 4.34
356 367 0.456312 GAACCTGTCCTAGCACGTCG 60.456 60.000 0.00 0.00 0.00 5.12
357 368 1.177256 AACCTGTCCTAGCACGTCGT 61.177 55.000 0.00 0.00 0.00 4.34
358 369 1.136984 CCTGTCCTAGCACGTCGTC 59.863 63.158 0.00 0.00 0.00 4.20
359 370 1.226046 CTGTCCTAGCACGTCGTCG 60.226 63.158 0.00 0.00 43.34 5.12
360 371 1.632948 CTGTCCTAGCACGTCGTCGA 61.633 60.000 9.47 0.00 40.62 4.20
361 372 1.225963 GTCCTAGCACGTCGTCGAC 60.226 63.158 15.51 15.51 40.62 4.20
362 373 2.099831 CCTAGCACGTCGTCGACC 59.900 66.667 19.29 5.94 40.62 4.79
363 374 2.396955 CCTAGCACGTCGTCGACCT 61.397 63.158 19.29 12.89 40.62 3.85
364 375 1.500844 CTAGCACGTCGTCGACCTT 59.499 57.895 19.29 4.09 40.62 3.50
365 376 0.793478 CTAGCACGTCGTCGACCTTG 60.793 60.000 19.29 16.58 40.62 3.61
366 377 1.229975 TAGCACGTCGTCGACCTTGA 61.230 55.000 19.29 0.00 40.62 3.02
367 378 2.081212 GCACGTCGTCGACCTTGAG 61.081 63.158 19.29 7.65 40.62 3.02
368 379 1.281960 CACGTCGTCGACCTTGAGT 59.718 57.895 19.29 8.29 40.62 3.41
369 380 0.725118 CACGTCGTCGACCTTGAGTC 60.725 60.000 19.29 0.00 42.54 3.36
370 381 1.162181 ACGTCGTCGACCTTGAGTCA 61.162 55.000 19.29 0.00 46.69 3.41
371 382 0.452950 CGTCGTCGACCTTGAGTCAG 60.453 60.000 19.29 0.00 46.69 3.51
372 383 0.592148 GTCGTCGACCTTGAGTCAGT 59.408 55.000 14.60 0.00 46.69 3.41
373 384 1.802960 GTCGTCGACCTTGAGTCAGTA 59.197 52.381 14.60 0.00 46.69 2.74
374 385 2.225019 GTCGTCGACCTTGAGTCAGTAA 59.775 50.000 14.60 0.00 46.69 2.24
375 386 2.483106 TCGTCGACCTTGAGTCAGTAAG 59.517 50.000 10.58 0.00 46.69 2.34
376 387 2.597520 GTCGACCTTGAGTCAGTAAGC 58.402 52.381 3.51 0.00 46.69 3.09
377 388 2.229302 GTCGACCTTGAGTCAGTAAGCT 59.771 50.000 3.51 0.00 46.69 3.74
378 389 2.229062 TCGACCTTGAGTCAGTAAGCTG 59.771 50.000 0.00 0.00 46.69 4.24
379 390 2.672478 CGACCTTGAGTCAGTAAGCTGG 60.672 54.545 0.00 0.00 46.69 4.85
380 391 2.300437 GACCTTGAGTCAGTAAGCTGGT 59.700 50.000 0.00 0.00 45.55 4.00
381 392 3.507411 ACCTTGAGTCAGTAAGCTGGTA 58.493 45.455 0.00 0.00 42.78 3.25
382 393 3.901844 ACCTTGAGTCAGTAAGCTGGTAA 59.098 43.478 0.00 0.00 42.78 2.85
383 394 4.532521 ACCTTGAGTCAGTAAGCTGGTAAT 59.467 41.667 0.00 0.00 42.78 1.89
384 395 5.013183 ACCTTGAGTCAGTAAGCTGGTAATT 59.987 40.000 0.00 0.00 42.78 1.40
385 396 5.352569 CCTTGAGTCAGTAAGCTGGTAATTG 59.647 44.000 0.00 0.00 42.78 2.32
386 397 5.483685 TGAGTCAGTAAGCTGGTAATTGT 57.516 39.130 0.00 0.00 42.78 2.71
387 398 6.599356 TGAGTCAGTAAGCTGGTAATTGTA 57.401 37.500 0.00 0.00 42.78 2.41
388 399 6.631016 TGAGTCAGTAAGCTGGTAATTGTAG 58.369 40.000 0.00 0.00 42.78 2.74
389 400 6.210784 TGAGTCAGTAAGCTGGTAATTGTAGT 59.789 38.462 0.00 0.00 42.78 2.73
390 401 7.005709 AGTCAGTAAGCTGGTAATTGTAGTT 57.994 36.000 0.00 0.00 42.78 2.24
391 402 7.450903 AGTCAGTAAGCTGGTAATTGTAGTTT 58.549 34.615 0.00 0.00 42.78 2.66
392 403 7.387948 AGTCAGTAAGCTGGTAATTGTAGTTTG 59.612 37.037 0.00 0.00 42.78 2.93
393 404 7.172703 GTCAGTAAGCTGGTAATTGTAGTTTGT 59.827 37.037 0.00 0.00 42.78 2.83
394 405 7.172532 TCAGTAAGCTGGTAATTGTAGTTTGTG 59.827 37.037 0.00 0.00 42.78 3.33
395 406 6.996282 AGTAAGCTGGTAATTGTAGTTTGTGT 59.004 34.615 0.00 0.00 0.00 3.72
396 407 6.709018 AAGCTGGTAATTGTAGTTTGTGTT 57.291 33.333 0.00 0.00 0.00 3.32
397 408 7.811117 AAGCTGGTAATTGTAGTTTGTGTTA 57.189 32.000 0.00 0.00 0.00 2.41
398 409 7.811117 AGCTGGTAATTGTAGTTTGTGTTAA 57.189 32.000 0.00 0.00 0.00 2.01
399 410 8.228035 AGCTGGTAATTGTAGTTTGTGTTAAA 57.772 30.769 0.00 0.00 0.00 1.52
400 411 8.349983 AGCTGGTAATTGTAGTTTGTGTTAAAG 58.650 33.333 0.00 0.00 0.00 1.85
401 412 8.347035 GCTGGTAATTGTAGTTTGTGTTAAAGA 58.653 33.333 0.00 0.00 0.00 2.52
402 413 9.659830 CTGGTAATTGTAGTTTGTGTTAAAGAC 57.340 33.333 0.00 0.00 0.00 3.01
427 438 8.857694 CCTTGTTGGTTTCTATTACTCCTAAA 57.142 34.615 0.00 0.00 0.00 1.85
430 441 8.801882 TGTTGGTTTCTATTACTCCTAAATGG 57.198 34.615 0.00 0.00 37.10 3.16
434 445 9.847224 TGGTTTCTATTACTCCTAAATGGAATC 57.153 33.333 0.00 0.00 45.63 2.52
436 447 8.496751 GTTTCTATTACTCCTAAATGGAATCGC 58.503 37.037 0.00 0.00 45.63 4.58
446 457 3.483869 GGAATCGCAGGAGGCCCT 61.484 66.667 0.00 0.00 45.74 5.19
452 463 1.002624 CGCAGGAGGCCCTTGTAAA 60.003 57.895 0.00 0.00 42.02 2.01
464 475 6.288294 AGGCCCTTGTAAATTTCTCAAAAAC 58.712 36.000 0.00 0.00 0.00 2.43
470 484 9.471742 CCTTGTAAATTTCTCAAAAACAAAACG 57.528 29.630 0.00 0.00 0.00 3.60
535 549 0.827507 ATGCTTGACGGCCCTTTGTT 60.828 50.000 0.00 0.00 0.00 2.83
618 684 2.439338 ATGCGCAATGGCCGGTAA 60.439 55.556 17.11 0.00 36.38 2.85
619 685 1.999071 GATGCGCAATGGCCGGTAAA 61.999 55.000 17.11 0.00 36.38 2.01
692 759 6.035843 ACTTACTTGTCTTCACGACGTAAAA 58.964 36.000 0.00 0.00 45.87 1.52
693 760 6.698766 ACTTACTTGTCTTCACGACGTAAAAT 59.301 34.615 0.00 0.00 45.87 1.82
764 838 1.314730 AGATTTTTGCCACGAACCGT 58.685 45.000 0.00 0.00 42.36 4.83
873 947 4.321601 CGAGAGAAGAAGAACCTGACACAT 60.322 45.833 0.00 0.00 0.00 3.21
880 954 3.314541 AGAACCTGACACATAACCGAC 57.685 47.619 0.00 0.00 0.00 4.79
1196 1275 3.932580 GACGATGACAGCCACGGCA 62.933 63.158 11.35 0.00 44.88 5.69
1216 1298 3.637273 GCCCACAACGTCTCCCCT 61.637 66.667 0.00 0.00 0.00 4.79
1456 1538 2.046864 CGAGGAGACGCTCTTCCCA 61.047 63.158 11.40 0.00 33.81 4.37
1531 1613 4.778143 GGCAACCTCACCGCCGAT 62.778 66.667 0.00 0.00 35.79 4.18
1560 1642 4.678269 CGACGCTGTCACGGACGT 62.678 66.667 5.89 5.89 42.27 4.34
2046 2133 4.090057 GGAACAGCGCACGAAGGC 62.090 66.667 11.47 0.00 0.00 4.35
2067 2154 1.421485 GTTTGCCAGAGATCGCACG 59.579 57.895 0.00 0.00 33.97 5.34
2129 2216 8.671028 GTCCCTTGTACGTAAATGTAATTGATT 58.329 33.333 0.00 0.00 36.10 2.57
2200 2287 3.689224 TCGCTACTGCTACGACAAC 57.311 52.632 0.00 0.00 36.97 3.32
2201 2288 1.162698 TCGCTACTGCTACGACAACT 58.837 50.000 0.00 0.00 36.97 3.16
2204 2291 2.159612 CGCTACTGCTACGACAACTGTA 60.160 50.000 0.00 0.00 36.97 2.74
2205 2292 3.427243 GCTACTGCTACGACAACTGTAG 58.573 50.000 0.00 1.12 41.75 2.74
2206 2293 3.119919 GCTACTGCTACGACAACTGTAGT 60.120 47.826 1.24 1.24 41.08 2.73
2207 2294 4.093998 GCTACTGCTACGACAACTGTAGTA 59.906 45.833 0.00 3.31 41.08 1.82
2208 2295 5.220815 GCTACTGCTACGACAACTGTAGTAT 60.221 44.000 3.70 0.00 41.08 2.12
2209 2296 5.640189 ACTGCTACGACAACTGTAGTATT 57.360 39.130 3.70 0.00 41.08 1.89
2210 2297 6.022163 ACTGCTACGACAACTGTAGTATTT 57.978 37.500 3.70 0.00 41.08 1.40
2211 2298 6.453092 ACTGCTACGACAACTGTAGTATTTT 58.547 36.000 3.70 0.00 41.08 1.82
2212 2299 6.927381 ACTGCTACGACAACTGTAGTATTTTT 59.073 34.615 3.70 0.00 41.08 1.94
2233 2320 5.913137 TTTTGGGAGGTATGCTACAAATG 57.087 39.130 0.00 0.00 0.00 2.32
2234 2321 4.584638 TTGGGAGGTATGCTACAAATGT 57.415 40.909 0.00 0.00 0.00 2.71
2235 2322 5.702065 TTGGGAGGTATGCTACAAATGTA 57.298 39.130 0.00 0.00 0.00 2.29
2277 2364 6.709018 ACAAATGTAGTTAAACACAAGCCT 57.291 33.333 0.00 0.00 30.75 4.58
2278 2365 7.107639 ACAAATGTAGTTAAACACAAGCCTT 57.892 32.000 0.00 0.00 30.75 4.35
2279 2366 7.200455 ACAAATGTAGTTAAACACAAGCCTTC 58.800 34.615 0.00 0.00 30.75 3.46
2280 2367 7.068226 ACAAATGTAGTTAAACACAAGCCTTCT 59.932 33.333 0.00 0.00 30.75 2.85
2281 2368 7.582667 AATGTAGTTAAACACAAGCCTTCTT 57.417 32.000 0.00 0.00 30.75 2.52
2282 2369 7.582667 ATGTAGTTAAACACAAGCCTTCTTT 57.417 32.000 0.00 0.00 30.75 2.52
2283 2370 6.791303 TGTAGTTAAACACAAGCCTTCTTTG 58.209 36.000 0.00 0.00 0.00 2.77
2284 2371 5.914898 AGTTAAACACAAGCCTTCTTTGT 57.085 34.783 0.00 0.00 0.00 2.83
2285 2372 7.553402 TGTAGTTAAACACAAGCCTTCTTTGTA 59.447 33.333 0.00 0.00 0.00 2.41
2286 2373 7.399245 AGTTAAACACAAGCCTTCTTTGTAA 57.601 32.000 0.00 0.00 0.00 2.41
2287 2374 7.832769 AGTTAAACACAAGCCTTCTTTGTAAA 58.167 30.769 0.00 0.00 0.00 2.01
2288 2375 8.474831 AGTTAAACACAAGCCTTCTTTGTAAAT 58.525 29.630 0.00 0.00 0.00 1.40
2289 2376 8.752254 GTTAAACACAAGCCTTCTTTGTAAATC 58.248 33.333 0.00 0.00 0.00 2.17
2290 2377 5.453567 ACACAAGCCTTCTTTGTAAATCC 57.546 39.130 0.00 0.00 0.00 3.01
2291 2378 4.892934 ACACAAGCCTTCTTTGTAAATCCA 59.107 37.500 0.00 0.00 0.00 3.41
2292 2379 5.221244 ACACAAGCCTTCTTTGTAAATCCAC 60.221 40.000 0.00 0.00 0.00 4.02
2293 2380 4.280929 ACAAGCCTTCTTTGTAAATCCACC 59.719 41.667 0.00 0.00 0.00 4.61
2294 2381 3.081804 AGCCTTCTTTGTAAATCCACCG 58.918 45.455 0.00 0.00 0.00 4.94
2295 2382 2.817844 GCCTTCTTTGTAAATCCACCGT 59.182 45.455 0.00 0.00 0.00 4.83
2296 2383 4.004982 GCCTTCTTTGTAAATCCACCGTA 58.995 43.478 0.00 0.00 0.00 4.02
2297 2384 4.094442 GCCTTCTTTGTAAATCCACCGTAG 59.906 45.833 0.00 0.00 0.00 3.51
2298 2385 5.243207 CCTTCTTTGTAAATCCACCGTAGT 58.757 41.667 0.00 0.00 0.00 2.73
2299 2386 5.704053 CCTTCTTTGTAAATCCACCGTAGTT 59.296 40.000 0.00 0.00 0.00 2.24
2300 2387 6.206048 CCTTCTTTGTAAATCCACCGTAGTTT 59.794 38.462 0.00 0.00 0.00 2.66
2301 2388 7.255346 CCTTCTTTGTAAATCCACCGTAGTTTT 60.255 37.037 0.00 0.00 0.00 2.43
2302 2389 7.571080 TCTTTGTAAATCCACCGTAGTTTTT 57.429 32.000 0.00 0.00 0.00 1.94
2321 2408 5.878406 TTTTTATGTTTGTGTGGTGGGAT 57.122 34.783 0.00 0.00 0.00 3.85
2322 2409 6.978674 TTTTTATGTTTGTGTGGTGGGATA 57.021 33.333 0.00 0.00 0.00 2.59
2323 2410 7.546250 TTTTTATGTTTGTGTGGTGGGATAT 57.454 32.000 0.00 0.00 0.00 1.63
2324 2411 8.651589 TTTTTATGTTTGTGTGGTGGGATATA 57.348 30.769 0.00 0.00 0.00 0.86
2325 2412 8.830915 TTTTATGTTTGTGTGGTGGGATATAT 57.169 30.769 0.00 0.00 0.00 0.86
2326 2413 7.815840 TTATGTTTGTGTGGTGGGATATATG 57.184 36.000 0.00 0.00 0.00 1.78
2327 2414 4.531854 TGTTTGTGTGGTGGGATATATGG 58.468 43.478 0.00 0.00 0.00 2.74
2328 2415 2.949177 TGTGTGGTGGGATATATGGC 57.051 50.000 0.00 0.00 0.00 4.40
2329 2416 1.071542 TGTGTGGTGGGATATATGGCG 59.928 52.381 0.00 0.00 0.00 5.69
2330 2417 1.346395 GTGTGGTGGGATATATGGCGA 59.654 52.381 0.00 0.00 0.00 5.54
2331 2418 2.027192 GTGTGGTGGGATATATGGCGAT 60.027 50.000 0.00 0.00 0.00 4.58
2332 2419 2.236146 TGTGGTGGGATATATGGCGATC 59.764 50.000 0.00 0.00 0.00 3.69
2333 2420 2.501723 GTGGTGGGATATATGGCGATCT 59.498 50.000 0.00 0.00 0.00 2.75
2334 2421 2.766263 TGGTGGGATATATGGCGATCTC 59.234 50.000 0.00 0.00 0.00 2.75
2335 2422 2.766263 GGTGGGATATATGGCGATCTCA 59.234 50.000 0.00 0.00 29.89 3.27
2336 2423 3.197766 GGTGGGATATATGGCGATCTCAA 59.802 47.826 0.00 0.00 34.36 3.02
2337 2424 4.323485 GGTGGGATATATGGCGATCTCAAA 60.323 45.833 0.00 0.00 34.36 2.69
2338 2425 5.431765 GTGGGATATATGGCGATCTCAAAT 58.568 41.667 0.00 0.00 34.36 2.32
2339 2426 6.408092 GGTGGGATATATGGCGATCTCAAATA 60.408 42.308 0.00 0.00 34.36 1.40
2340 2427 7.047891 GTGGGATATATGGCGATCTCAAATAA 58.952 38.462 0.00 0.00 34.36 1.40
2341 2428 7.716998 GTGGGATATATGGCGATCTCAAATAAT 59.283 37.037 0.00 0.00 34.36 1.28
2342 2429 8.274322 TGGGATATATGGCGATCTCAAATAATT 58.726 33.333 0.00 0.00 29.44 1.40
2343 2430 8.778358 GGGATATATGGCGATCTCAAATAATTC 58.222 37.037 0.00 0.00 0.00 2.17
2344 2431 9.553064 GGATATATGGCGATCTCAAATAATTCT 57.447 33.333 0.00 0.00 0.00 2.40
2349 2436 8.908786 ATGGCGATCTCAAATAATTCTAGAAA 57.091 30.769 9.71 0.00 0.00 2.52
2350 2437 8.731275 TGGCGATCTCAAATAATTCTAGAAAA 57.269 30.769 9.71 1.10 0.00 2.29
2351 2438 8.830580 TGGCGATCTCAAATAATTCTAGAAAAG 58.169 33.333 9.71 0.00 0.00 2.27
2352 2439 7.800847 GGCGATCTCAAATAATTCTAGAAAAGC 59.199 37.037 9.71 0.68 0.00 3.51
2353 2440 8.555361 GCGATCTCAAATAATTCTAGAAAAGCT 58.445 33.333 9.71 0.00 0.00 3.74
2365 2452 8.682936 ATTCTAGAAAAGCTCAAGAGAAAACA 57.317 30.769 9.71 0.00 0.00 2.83
2366 2453 8.506168 TTCTAGAAAAGCTCAAGAGAAAACAA 57.494 30.769 1.68 0.00 0.00 2.83
2367 2454 8.147642 TCTAGAAAAGCTCAAGAGAAAACAAG 57.852 34.615 0.32 0.00 0.00 3.16
2368 2455 7.987458 TCTAGAAAAGCTCAAGAGAAAACAAGA 59.013 33.333 0.32 0.00 0.00 3.02
2369 2456 6.790282 AGAAAAGCTCAAGAGAAAACAAGAC 58.210 36.000 0.32 0.00 0.00 3.01
2370 2457 5.506686 AAAGCTCAAGAGAAAACAAGACC 57.493 39.130 0.32 0.00 0.00 3.85
2371 2458 4.156455 AGCTCAAGAGAAAACAAGACCA 57.844 40.909 0.32 0.00 0.00 4.02
2372 2459 4.133078 AGCTCAAGAGAAAACAAGACCAG 58.867 43.478 0.32 0.00 0.00 4.00
2373 2460 3.304324 GCTCAAGAGAAAACAAGACCAGC 60.304 47.826 0.32 0.00 0.00 4.85
2374 2461 2.872245 TCAAGAGAAAACAAGACCAGCG 59.128 45.455 0.00 0.00 0.00 5.18
2375 2462 2.614057 CAAGAGAAAACAAGACCAGCGT 59.386 45.455 0.00 0.00 0.00 5.07
2376 2463 2.919228 AGAGAAAACAAGACCAGCGTT 58.081 42.857 0.00 0.00 0.00 4.84
2377 2464 2.872858 AGAGAAAACAAGACCAGCGTTC 59.127 45.455 0.00 0.00 0.00 3.95
2378 2465 2.872858 GAGAAAACAAGACCAGCGTTCT 59.127 45.455 0.00 0.00 0.00 3.01
2379 2466 4.056050 GAGAAAACAAGACCAGCGTTCTA 58.944 43.478 0.00 0.00 0.00 2.10
2380 2467 4.642429 AGAAAACAAGACCAGCGTTCTAT 58.358 39.130 0.00 0.00 0.00 1.98
2381 2468 4.691216 AGAAAACAAGACCAGCGTTCTATC 59.309 41.667 0.00 0.00 0.00 2.08
2382 2469 2.279582 ACAAGACCAGCGTTCTATCG 57.720 50.000 0.00 0.00 0.00 2.92
2383 2470 1.816835 ACAAGACCAGCGTTCTATCGA 59.183 47.619 0.00 0.00 0.00 3.59
2384 2471 2.427453 ACAAGACCAGCGTTCTATCGAT 59.573 45.455 2.16 2.16 0.00 3.59
2385 2472 3.046390 CAAGACCAGCGTTCTATCGATC 58.954 50.000 0.00 0.00 0.00 3.69
2386 2473 2.298610 AGACCAGCGTTCTATCGATCA 58.701 47.619 0.00 0.00 0.00 2.92
2387 2474 2.033550 AGACCAGCGTTCTATCGATCAC 59.966 50.000 0.00 0.00 0.00 3.06
2388 2475 1.749063 ACCAGCGTTCTATCGATCACA 59.251 47.619 0.00 0.00 0.00 3.58
2389 2476 2.362397 ACCAGCGTTCTATCGATCACAT 59.638 45.455 0.00 0.00 0.00 3.21
2390 2477 3.181475 ACCAGCGTTCTATCGATCACATT 60.181 43.478 0.00 0.00 0.00 2.71
2391 2478 3.183172 CCAGCGTTCTATCGATCACATTG 59.817 47.826 0.00 0.00 0.00 2.82
2392 2479 4.044426 CAGCGTTCTATCGATCACATTGA 58.956 43.478 0.00 0.00 0.00 2.57
2393 2480 4.683320 CAGCGTTCTATCGATCACATTGAT 59.317 41.667 0.00 0.00 40.34 2.57
2394 2481 5.176406 CAGCGTTCTATCGATCACATTGATT 59.824 40.000 0.00 0.00 37.20 2.57
2395 2482 5.755375 AGCGTTCTATCGATCACATTGATTT 59.245 36.000 0.00 0.00 37.20 2.17
2396 2483 6.923508 AGCGTTCTATCGATCACATTGATTTA 59.076 34.615 0.00 0.00 37.20 1.40
2397 2484 7.600375 AGCGTTCTATCGATCACATTGATTTAT 59.400 33.333 0.00 0.00 37.20 1.40
2398 2485 7.685712 GCGTTCTATCGATCACATTGATTTATG 59.314 37.037 0.00 0.00 37.20 1.90
2399 2486 8.164790 CGTTCTATCGATCACATTGATTTATGG 58.835 37.037 0.00 0.00 37.20 2.74
2400 2487 8.993121 GTTCTATCGATCACATTGATTTATGGT 58.007 33.333 0.00 0.00 37.20 3.55
2401 2488 8.763049 TCTATCGATCACATTGATTTATGGTC 57.237 34.615 0.00 0.00 37.20 4.02
2402 2489 8.588472 TCTATCGATCACATTGATTTATGGTCT 58.412 33.333 0.00 0.00 37.20 3.85
2403 2490 9.212641 CTATCGATCACATTGATTTATGGTCTT 57.787 33.333 0.00 0.00 37.20 3.01
2404 2491 7.864108 TCGATCACATTGATTTATGGTCTTT 57.136 32.000 0.00 0.00 37.20 2.52
2405 2492 7.919690 TCGATCACATTGATTTATGGTCTTTC 58.080 34.615 0.00 0.00 37.20 2.62
2406 2493 7.012327 TCGATCACATTGATTTATGGTCTTTCC 59.988 37.037 0.00 0.00 37.20 3.13
2407 2494 7.201723 CGATCACATTGATTTATGGTCTTTCCA 60.202 37.037 0.00 0.00 43.27 3.53
2408 2495 8.004087 ATCACATTGATTTATGGTCTTTCCAG 57.996 34.615 0.00 0.00 41.15 3.86
2409 2496 7.616935 ATCACATTGATTTATGGTCTTTCCAGT 59.383 33.333 0.00 0.00 41.15 4.00
2420 2507 5.996644 TGGTCTTTCCAGTTCTTGTTTAGA 58.003 37.500 0.00 0.00 41.93 2.10
2421 2508 6.601332 TGGTCTTTCCAGTTCTTGTTTAGAT 58.399 36.000 0.00 0.00 41.93 1.98
2422 2509 7.741785 TGGTCTTTCCAGTTCTTGTTTAGATA 58.258 34.615 0.00 0.00 41.93 1.98
2423 2510 8.383175 TGGTCTTTCCAGTTCTTGTTTAGATAT 58.617 33.333 0.00 0.00 41.93 1.63
2424 2511 9.886132 GGTCTTTCCAGTTCTTGTTTAGATATA 57.114 33.333 0.00 0.00 35.97 0.86
2428 2515 9.542462 TTTCCAGTTCTTGTTTAGATATATCGG 57.458 33.333 7.08 0.00 31.54 4.18
2429 2516 8.246430 TCCAGTTCTTGTTTAGATATATCGGT 57.754 34.615 7.08 0.00 31.54 4.69
2430 2517 8.701895 TCCAGTTCTTGTTTAGATATATCGGTT 58.298 33.333 7.08 0.00 31.54 4.44
2431 2518 9.326413 CCAGTTCTTGTTTAGATATATCGGTTT 57.674 33.333 7.08 0.00 31.54 3.27
2436 2523 9.675464 TCTTGTTTAGATATATCGGTTTTTGGT 57.325 29.630 7.08 0.00 0.00 3.67
2437 2524 9.931210 CTTGTTTAGATATATCGGTTTTTGGTC 57.069 33.333 7.08 0.00 0.00 4.02
2438 2525 9.451002 TTGTTTAGATATATCGGTTTTTGGTCA 57.549 29.630 7.08 0.00 0.00 4.02
2439 2526 8.885722 TGTTTAGATATATCGGTTTTTGGTCAC 58.114 33.333 7.08 0.00 0.00 3.67
2440 2527 9.106070 GTTTAGATATATCGGTTTTTGGTCACT 57.894 33.333 7.08 0.00 0.00 3.41
2441 2528 9.675464 TTTAGATATATCGGTTTTTGGTCACTT 57.325 29.630 7.08 0.00 0.00 3.16
2443 2530 8.888579 AGATATATCGGTTTTTGGTCACTTAG 57.111 34.615 7.08 0.00 0.00 2.18
2444 2531 8.483758 AGATATATCGGTTTTTGGTCACTTAGT 58.516 33.333 7.08 0.00 0.00 2.24
2445 2532 9.754382 GATATATCGGTTTTTGGTCACTTAGTA 57.246 33.333 0.00 0.00 0.00 1.82
2446 2533 9.760077 ATATATCGGTTTTTGGTCACTTAGTAG 57.240 33.333 0.00 0.00 0.00 2.57
2447 2534 4.060205 TCGGTTTTTGGTCACTTAGTAGC 58.940 43.478 0.00 0.00 0.00 3.58
2448 2535 4.062991 CGGTTTTTGGTCACTTAGTAGCT 58.937 43.478 0.00 0.00 0.00 3.32
2449 2536 4.084013 CGGTTTTTGGTCACTTAGTAGCTG 60.084 45.833 0.00 0.00 0.00 4.24
2450 2537 5.061179 GGTTTTTGGTCACTTAGTAGCTGA 58.939 41.667 0.00 0.00 0.00 4.26
2451 2538 5.529800 GGTTTTTGGTCACTTAGTAGCTGAA 59.470 40.000 0.00 0.00 0.00 3.02
2452 2539 6.293462 GGTTTTTGGTCACTTAGTAGCTGAAG 60.293 42.308 0.00 0.00 0.00 3.02
2453 2540 5.546621 TTTGGTCACTTAGTAGCTGAAGT 57.453 39.130 0.00 0.05 36.31 3.01
2454 2541 4.785511 TGGTCACTTAGTAGCTGAAGTC 57.214 45.455 0.00 0.00 33.60 3.01
2455 2542 4.149598 TGGTCACTTAGTAGCTGAAGTCA 58.850 43.478 0.00 0.00 33.60 3.41
2456 2543 4.587262 TGGTCACTTAGTAGCTGAAGTCAA 59.413 41.667 0.00 0.00 33.60 3.18
2457 2544 5.164954 GGTCACTTAGTAGCTGAAGTCAAG 58.835 45.833 0.00 0.00 33.60 3.02
2458 2545 5.279056 GGTCACTTAGTAGCTGAAGTCAAGT 60.279 44.000 0.00 0.00 33.60 3.16
2459 2546 5.859648 GTCACTTAGTAGCTGAAGTCAAGTC 59.140 44.000 0.00 0.00 33.60 3.01
2460 2547 5.047943 TCACTTAGTAGCTGAAGTCAAGTCC 60.048 44.000 0.00 0.00 33.60 3.85
2461 2548 4.221041 ACTTAGTAGCTGAAGTCAAGTCCC 59.779 45.833 0.00 0.00 29.85 4.46
2462 2549 2.896039 AGTAGCTGAAGTCAAGTCCCT 58.104 47.619 0.00 0.00 0.00 4.20
2463 2550 3.243724 AGTAGCTGAAGTCAAGTCCCTT 58.756 45.455 0.00 0.00 0.00 3.95
2464 2551 4.417437 AGTAGCTGAAGTCAAGTCCCTTA 58.583 43.478 0.00 0.00 0.00 2.69
2465 2552 3.686916 AGCTGAAGTCAAGTCCCTTAC 57.313 47.619 0.00 0.00 0.00 2.34
2466 2553 2.028930 AGCTGAAGTCAAGTCCCTTACG 60.029 50.000 0.00 0.00 0.00 3.18
2467 2554 2.029290 GCTGAAGTCAAGTCCCTTACGA 60.029 50.000 0.00 0.00 0.00 3.43
2468 2555 3.368531 GCTGAAGTCAAGTCCCTTACGAT 60.369 47.826 0.00 0.00 0.00 3.73
2469 2556 4.425520 CTGAAGTCAAGTCCCTTACGATC 58.574 47.826 0.00 0.00 0.00 3.69
2470 2557 3.119602 TGAAGTCAAGTCCCTTACGATCG 60.120 47.826 14.88 14.88 0.00 3.69
2471 2558 2.719739 AGTCAAGTCCCTTACGATCGA 58.280 47.619 24.34 2.23 0.00 3.59
2472 2559 3.288964 AGTCAAGTCCCTTACGATCGAT 58.711 45.455 24.34 8.79 0.00 3.59
2473 2560 4.458397 AGTCAAGTCCCTTACGATCGATA 58.542 43.478 24.34 7.72 0.00 2.92
2474 2561 4.885907 AGTCAAGTCCCTTACGATCGATAA 59.114 41.667 24.34 14.79 0.00 1.75
2475 2562 5.535406 AGTCAAGTCCCTTACGATCGATAAT 59.465 40.000 24.34 0.83 0.00 1.28
2476 2563 5.629849 GTCAAGTCCCTTACGATCGATAATG 59.370 44.000 24.34 12.57 0.00 1.90
2477 2564 5.301045 TCAAGTCCCTTACGATCGATAATGT 59.699 40.000 24.34 0.00 0.00 2.71
2478 2565 5.786264 AGTCCCTTACGATCGATAATGTT 57.214 39.130 24.34 0.00 0.00 2.71
2479 2566 6.158023 AGTCCCTTACGATCGATAATGTTT 57.842 37.500 24.34 0.00 0.00 2.83
2480 2567 7.281040 AGTCCCTTACGATCGATAATGTTTA 57.719 36.000 24.34 0.00 0.00 2.01
2481 2568 7.893658 AGTCCCTTACGATCGATAATGTTTAT 58.106 34.615 24.34 0.00 0.00 1.40
2482 2569 8.365647 AGTCCCTTACGATCGATAATGTTTATT 58.634 33.333 24.34 0.00 0.00 1.40
2483 2570 8.645487 GTCCCTTACGATCGATAATGTTTATTC 58.355 37.037 24.34 0.00 0.00 1.75
2484 2571 7.816031 TCCCTTACGATCGATAATGTTTATTCC 59.184 37.037 24.34 0.00 0.00 3.01
2485 2572 7.817962 CCCTTACGATCGATAATGTTTATTCCT 59.182 37.037 24.34 0.00 0.00 3.36
2486 2573 8.861101 CCTTACGATCGATAATGTTTATTCCTC 58.139 37.037 24.34 0.00 0.00 3.71
2487 2574 9.406828 CTTACGATCGATAATGTTTATTCCTCA 57.593 33.333 24.34 0.00 0.00 3.86
2488 2575 7.875316 ACGATCGATAATGTTTATTCCTCAG 57.125 36.000 24.34 0.00 0.00 3.35
2489 2576 7.658261 ACGATCGATAATGTTTATTCCTCAGA 58.342 34.615 24.34 0.00 0.00 3.27
2490 2577 8.141909 ACGATCGATAATGTTTATTCCTCAGAA 58.858 33.333 24.34 0.00 36.15 3.02
2491 2578 8.978539 CGATCGATAATGTTTATTCCTCAGAAA 58.021 33.333 10.26 0.00 35.09 2.52
2493 2580 9.838339 ATCGATAATGTTTATTCCTCAGAAACT 57.162 29.630 0.00 0.00 35.09 2.66
2494 2581 9.667107 TCGATAATGTTTATTCCTCAGAAACTT 57.333 29.630 0.00 0.00 35.09 2.66
2504 2591 6.619801 TTCCTCAGAAACTTTTAGAACAGC 57.380 37.500 0.00 0.00 0.00 4.40
2505 2592 4.750098 TCCTCAGAAACTTTTAGAACAGCG 59.250 41.667 0.00 0.00 0.00 5.18
2506 2593 4.511826 CCTCAGAAACTTTTAGAACAGCGT 59.488 41.667 0.00 0.00 0.00 5.07
2507 2594 5.007724 CCTCAGAAACTTTTAGAACAGCGTT 59.992 40.000 0.00 0.00 0.00 4.84
2508 2595 5.806286 TCAGAAACTTTTAGAACAGCGTTG 58.194 37.500 0.00 0.00 0.00 4.10
2509 2596 4.437820 CAGAAACTTTTAGAACAGCGTTGC 59.562 41.667 0.00 0.00 0.00 4.17
2510 2597 4.095782 AGAAACTTTTAGAACAGCGTTGCA 59.904 37.500 0.00 0.00 0.00 4.08
2511 2598 3.609103 ACTTTTAGAACAGCGTTGCAG 57.391 42.857 0.00 0.00 0.00 4.41
2512 2599 3.202906 ACTTTTAGAACAGCGTTGCAGA 58.797 40.909 0.00 0.00 0.00 4.26
2513 2600 3.815401 ACTTTTAGAACAGCGTTGCAGAT 59.185 39.130 0.00 0.00 0.00 2.90
2514 2601 4.275936 ACTTTTAGAACAGCGTTGCAGATT 59.724 37.500 0.00 0.00 0.00 2.40
2515 2602 3.811722 TTAGAACAGCGTTGCAGATTG 57.188 42.857 0.00 0.00 0.00 2.67
2516 2603 1.597742 AGAACAGCGTTGCAGATTGT 58.402 45.000 0.00 0.00 0.00 2.71
2517 2604 1.532868 AGAACAGCGTTGCAGATTGTC 59.467 47.619 0.00 0.00 0.00 3.18
2518 2605 1.532868 GAACAGCGTTGCAGATTGTCT 59.467 47.619 0.00 0.00 0.00 3.41
2519 2606 0.870393 ACAGCGTTGCAGATTGTCTG 59.130 50.000 0.00 2.65 46.90 3.51
2536 2623 9.167311 AGATTGTCTGACAAGGTATAATTGTTC 57.833 33.333 25.40 14.47 41.94 3.18
2537 2624 9.167311 GATTGTCTGACAAGGTATAATTGTTCT 57.833 33.333 25.40 6.33 41.94 3.01
2538 2625 7.905604 TGTCTGACAAGGTATAATTGTTCTG 57.094 36.000 8.27 4.99 40.86 3.02
2539 2626 7.676004 TGTCTGACAAGGTATAATTGTTCTGA 58.324 34.615 8.27 6.55 40.86 3.27
2540 2627 7.819415 TGTCTGACAAGGTATAATTGTTCTGAG 59.181 37.037 8.27 2.56 40.86 3.35
2541 2628 7.819900 GTCTGACAAGGTATAATTGTTCTGAGT 59.180 37.037 2.24 0.00 40.86 3.41
2542 2629 8.375506 TCTGACAAGGTATAATTGTTCTGAGTT 58.624 33.333 6.15 0.00 40.86 3.01
2543 2630 9.653287 CTGACAAGGTATAATTGTTCTGAGTTA 57.347 33.333 6.15 0.00 40.86 2.24
2544 2631 9.653287 TGACAAGGTATAATTGTTCTGAGTTAG 57.347 33.333 6.15 0.00 40.86 2.34
2545 2632 8.494016 ACAAGGTATAATTGTTCTGAGTTAGC 57.506 34.615 0.00 0.00 37.61 3.09
2546 2633 8.322091 ACAAGGTATAATTGTTCTGAGTTAGCT 58.678 33.333 0.00 0.00 37.61 3.32
2547 2634 9.817809 CAAGGTATAATTGTTCTGAGTTAGCTA 57.182 33.333 0.00 0.00 0.00 3.32
2548 2635 9.819267 AAGGTATAATTGTTCTGAGTTAGCTAC 57.181 33.333 0.00 0.00 0.00 3.58
2549 2636 8.136165 AGGTATAATTGTTCTGAGTTAGCTACG 58.864 37.037 0.00 0.00 0.00 3.51
2550 2637 7.381678 GGTATAATTGTTCTGAGTTAGCTACGG 59.618 40.741 0.00 0.00 0.00 4.02
2551 2638 2.649331 TGTTCTGAGTTAGCTACGGC 57.351 50.000 0.00 0.00 39.06 5.68
2562 2649 2.509336 CTACGGCTTGTGGCTCGG 60.509 66.667 0.00 0.00 41.46 4.63
2563 2650 4.752879 TACGGCTTGTGGCTCGGC 62.753 66.667 0.00 0.00 41.46 5.54
2566 2653 4.704833 GGCTTGTGGCTCGGCAGA 62.705 66.667 0.00 0.00 41.46 4.26
2568 2655 2.435586 CTTGTGGCTCGGCAGAGG 60.436 66.667 15.89 0.00 44.51 3.69
2569 2656 2.922503 TTGTGGCTCGGCAGAGGA 60.923 61.111 15.89 0.00 44.51 3.71
2570 2657 3.240134 TTGTGGCTCGGCAGAGGAC 62.240 63.158 15.89 0.00 44.51 3.85
2571 2658 4.459089 GTGGCTCGGCAGAGGACC 62.459 72.222 15.89 9.51 44.51 4.46
2572 2659 4.704103 TGGCTCGGCAGAGGACCT 62.704 66.667 15.89 0.00 44.51 3.85
2573 2660 3.394836 GGCTCGGCAGAGGACCTT 61.395 66.667 15.89 0.00 44.51 3.50
2574 2661 2.185608 GCTCGGCAGAGGACCTTC 59.814 66.667 15.89 0.00 44.51 3.46
2575 2662 2.650116 GCTCGGCAGAGGACCTTCA 61.650 63.158 15.89 0.00 44.51 3.02
2576 2663 1.965754 GCTCGGCAGAGGACCTTCAT 61.966 60.000 15.89 0.00 44.51 2.57
2577 2664 0.539051 CTCGGCAGAGGACCTTCATT 59.461 55.000 5.89 0.00 40.75 2.57
2578 2665 0.984230 TCGGCAGAGGACCTTCATTT 59.016 50.000 0.00 0.00 0.00 2.32
2579 2666 2.168521 CTCGGCAGAGGACCTTCATTTA 59.831 50.000 5.89 0.00 40.75 1.40
2580 2667 2.771943 TCGGCAGAGGACCTTCATTTAT 59.228 45.455 0.00 0.00 0.00 1.40
2581 2668 3.199946 TCGGCAGAGGACCTTCATTTATT 59.800 43.478 0.00 0.00 0.00 1.40
2582 2669 3.313526 CGGCAGAGGACCTTCATTTATTG 59.686 47.826 0.00 0.00 0.00 1.90
2583 2670 4.526970 GGCAGAGGACCTTCATTTATTGA 58.473 43.478 0.00 0.00 0.00 2.57
2584 2671 4.578105 GGCAGAGGACCTTCATTTATTGAG 59.422 45.833 0.00 0.00 35.27 3.02
2585 2672 4.578105 GCAGAGGACCTTCATTTATTGAGG 59.422 45.833 0.00 0.00 35.27 3.86
2586 2673 5.630069 GCAGAGGACCTTCATTTATTGAGGA 60.630 44.000 0.00 0.00 33.37 3.71
2587 2674 6.599445 CAGAGGACCTTCATTTATTGAGGAT 58.401 40.000 0.00 0.00 33.37 3.24
2588 2675 6.709846 CAGAGGACCTTCATTTATTGAGGATC 59.290 42.308 0.00 0.00 33.37 3.36
2589 2676 6.619023 AGAGGACCTTCATTTATTGAGGATCT 59.381 38.462 0.00 0.00 33.37 2.75
2590 2677 6.836242 AGGACCTTCATTTATTGAGGATCTC 58.164 40.000 0.00 0.00 33.37 2.75
2591 2678 6.619023 AGGACCTTCATTTATTGAGGATCTCT 59.381 38.462 0.00 0.00 33.37 3.10
2592 2679 7.128573 AGGACCTTCATTTATTGAGGATCTCTT 59.871 37.037 0.00 0.00 33.37 2.85
2593 2680 7.228308 GGACCTTCATTTATTGAGGATCTCTTG 59.772 40.741 0.00 0.00 33.37 3.02
2594 2681 6.545298 ACCTTCATTTATTGAGGATCTCTTGC 59.455 38.462 0.00 0.00 33.37 4.01
2595 2682 6.771749 CCTTCATTTATTGAGGATCTCTTGCT 59.228 38.462 0.00 0.00 33.37 3.91
2596 2683 7.255173 CCTTCATTTATTGAGGATCTCTTGCTG 60.255 40.741 0.00 0.00 33.37 4.41
2597 2684 6.060136 TCATTTATTGAGGATCTCTTGCTGG 58.940 40.000 0.00 0.00 34.92 4.85
2598 2685 5.698741 TTTATTGAGGATCTCTTGCTGGA 57.301 39.130 0.00 0.00 34.92 3.86
2599 2686 5.698741 TTATTGAGGATCTCTTGCTGGAA 57.301 39.130 0.00 0.00 34.92 3.53
2600 2687 3.623906 TTGAGGATCTCTTGCTGGAAG 57.376 47.619 2.09 2.09 34.92 3.46
2601 2688 2.825223 TGAGGATCTCTTGCTGGAAGA 58.175 47.619 11.23 11.23 38.45 2.87
2602 2689 3.382278 TGAGGATCTCTTGCTGGAAGAT 58.618 45.455 12.13 0.00 40.06 2.40
2603 2690 3.779183 TGAGGATCTCTTGCTGGAAGATT 59.221 43.478 12.13 3.38 40.06 2.40
2604 2691 4.964897 TGAGGATCTCTTGCTGGAAGATTA 59.035 41.667 12.13 4.52 40.06 1.75
2605 2692 5.605908 TGAGGATCTCTTGCTGGAAGATTAT 59.394 40.000 12.13 8.96 40.06 1.28
2606 2693 6.784473 TGAGGATCTCTTGCTGGAAGATTATA 59.216 38.462 12.13 0.00 40.06 0.98
2607 2694 7.290948 TGAGGATCTCTTGCTGGAAGATTATAA 59.709 37.037 12.13 0.00 40.06 0.98
2608 2695 7.449247 AGGATCTCTTGCTGGAAGATTATAAC 58.551 38.462 12.13 6.35 40.06 1.89
2609 2696 7.071698 AGGATCTCTTGCTGGAAGATTATAACA 59.928 37.037 12.13 0.00 40.06 2.41
2610 2697 7.172361 GGATCTCTTGCTGGAAGATTATAACAC 59.828 40.741 12.13 0.00 40.06 3.32
2611 2698 7.187824 TCTCTTGCTGGAAGATTATAACACT 57.812 36.000 12.13 0.00 40.06 3.55
2612 2699 8.306313 TCTCTTGCTGGAAGATTATAACACTA 57.694 34.615 12.13 0.00 40.06 2.74
2613 2700 8.928448 TCTCTTGCTGGAAGATTATAACACTAT 58.072 33.333 12.13 0.00 40.06 2.12
2614 2701 9.202273 CTCTTGCTGGAAGATTATAACACTATC 57.798 37.037 12.13 0.00 40.06 2.08
2615 2702 8.928448 TCTTGCTGGAAGATTATAACACTATCT 58.072 33.333 7.58 0.00 35.64 1.98
2616 2703 9.553064 CTTGCTGGAAGATTATAACACTATCTT 57.447 33.333 2.37 0.00 40.36 2.40
2669 2756 6.844097 AAAAGTAGAACACCTTTTCAACCA 57.156 33.333 0.00 0.00 0.00 3.67
2670 2757 7.418337 AAAAGTAGAACACCTTTTCAACCAT 57.582 32.000 0.00 0.00 0.00 3.55
2671 2758 6.391227 AAGTAGAACACCTTTTCAACCATG 57.609 37.500 0.00 0.00 0.00 3.66
2740 2827 1.007271 CCTCTCTGTGCGACACGTT 60.007 57.895 5.69 0.00 37.14 3.99
2797 2884 6.040391 CCTTCGCCAAATCCCAATTTCTATAA 59.960 38.462 0.00 0.00 32.69 0.98
2802 2889 7.416213 CGCCAAATCCCAATTTCTATAACTCAA 60.416 37.037 0.00 0.00 32.69 3.02
3011 3100 2.436824 GGCAGAGGAGGTTTCGGC 60.437 66.667 0.00 0.00 35.43 5.54
3065 4546 2.124653 TCGTTGCCGTTGTTGGGT 60.125 55.556 0.00 0.00 35.01 4.51
3067 4548 1.587613 CGTTGCCGTTGTTGGGTTG 60.588 57.895 0.00 0.00 0.00 3.77
3077 4558 4.636648 CCGTTGTTGGGTTGTGCTATATTA 59.363 41.667 0.00 0.00 0.00 0.98
3090 4571 2.159476 GCTATATTATGTCCGTCGCCGA 60.159 50.000 0.00 0.00 35.63 5.54
3110 4591 2.222886 ACGAGATGGGTAGAGATGACG 58.777 52.381 0.00 0.00 0.00 4.35
3135 4616 3.340034 GTTTGTATGGTCGTGGGAATCA 58.660 45.455 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 7.454260 TGCATCGAGTCATCAACTAGTATAT 57.546 36.000 0.00 0.00 38.74 0.86
21 22 5.067805 ACATGCATCGAGTCATCAACTAGTA 59.932 40.000 0.00 0.00 38.74 1.82
28 29 1.944032 CCACATGCATCGAGTCATCA 58.056 50.000 0.00 0.00 0.00 3.07
118 119 4.758674 TGAAGGATAATACTACTCGTCCGG 59.241 45.833 0.00 0.00 0.00 5.14
119 120 5.936686 TGAAGGATAATACTACTCGTCCG 57.063 43.478 0.00 0.00 0.00 4.79
120 121 6.040166 TGGTTGAAGGATAATACTACTCGTCC 59.960 42.308 0.00 0.00 0.00 4.79
122 123 6.606395 ACTGGTTGAAGGATAATACTACTCGT 59.394 38.462 0.00 0.00 0.00 4.18
123 124 7.040473 ACTGGTTGAAGGATAATACTACTCG 57.960 40.000 0.00 0.00 0.00 4.18
124 125 9.134055 ACTACTGGTTGAAGGATAATACTACTC 57.866 37.037 0.00 0.00 0.00 2.59
125 126 8.915036 CACTACTGGTTGAAGGATAATACTACT 58.085 37.037 0.00 0.00 0.00 2.57
126 127 7.652507 GCACTACTGGTTGAAGGATAATACTAC 59.347 40.741 0.00 0.00 0.00 2.73
127 128 7.343574 TGCACTACTGGTTGAAGGATAATACTA 59.656 37.037 0.00 0.00 0.00 1.82
128 129 6.156256 TGCACTACTGGTTGAAGGATAATACT 59.844 38.462 0.00 0.00 0.00 2.12
129 130 6.346096 TGCACTACTGGTTGAAGGATAATAC 58.654 40.000 0.00 0.00 0.00 1.89
130 131 6.408092 CCTGCACTACTGGTTGAAGGATAATA 60.408 42.308 0.00 0.00 32.81 0.98
131 132 5.431765 CTGCACTACTGGTTGAAGGATAAT 58.568 41.667 0.00 0.00 0.00 1.28
132 133 4.323485 CCTGCACTACTGGTTGAAGGATAA 60.323 45.833 0.00 0.00 32.81 1.75
133 134 3.197766 CCTGCACTACTGGTTGAAGGATA 59.802 47.826 0.00 0.00 32.81 2.59
134 135 2.026822 CCTGCACTACTGGTTGAAGGAT 60.027 50.000 0.00 0.00 32.81 3.24
135 136 1.347707 CCTGCACTACTGGTTGAAGGA 59.652 52.381 0.00 0.00 32.81 3.36
136 137 1.813513 CCTGCACTACTGGTTGAAGG 58.186 55.000 0.00 0.00 32.81 3.46
137 138 1.160137 GCCTGCACTACTGGTTGAAG 58.840 55.000 0.00 0.00 39.53 3.02
138 139 0.764890 AGCCTGCACTACTGGTTGAA 59.235 50.000 0.00 0.00 39.53 2.69
139 140 2.452116 AGCCTGCACTACTGGTTGA 58.548 52.632 0.00 0.00 39.53 3.18
140 141 0.957395 CCAGCCTGCACTACTGGTTG 60.957 60.000 14.20 7.56 44.91 3.77
141 142 1.376466 CCAGCCTGCACTACTGGTT 59.624 57.895 14.20 0.00 44.91 3.67
142 143 3.072476 CCAGCCTGCACTACTGGT 58.928 61.111 14.20 0.00 44.91 4.00
144 145 2.437359 GCCCAGCCTGCACTACTG 60.437 66.667 0.00 0.00 0.00 2.74
145 146 4.087892 CGCCCAGCCTGCACTACT 62.088 66.667 0.00 0.00 0.00 2.57
171 172 1.947597 TTGCATGGGCTCCATTTCGC 61.948 55.000 4.15 6.15 42.23 4.70
202 208 9.179909 AGTATGCATGTACTAGTATATCCAGTC 57.820 37.037 10.16 4.90 33.29 3.51
216 222 7.276658 GCTTGTGATATAGGAGTATGCATGTAC 59.723 40.741 10.16 0.00 0.00 2.90
282 293 5.941647 ACCAAAAGCATATACGTACCAAACT 59.058 36.000 0.00 0.00 0.00 2.66
290 301 4.519213 TGGCTAACCAAAAGCATATACGT 58.481 39.130 0.00 0.00 45.37 3.57
305 316 2.614057 GGACATGCACATACTGGCTAAC 59.386 50.000 0.00 0.00 0.00 2.34
318 329 2.448453 TCAAGCATCATTGGACATGCA 58.552 42.857 10.39 0.00 46.70 3.96
321 332 3.446161 CAGGTTCAAGCATCATTGGACAT 59.554 43.478 0.70 0.00 39.98 3.06
326 337 3.087031 AGGACAGGTTCAAGCATCATTG 58.913 45.455 0.00 0.00 0.00 2.82
336 347 0.601558 GACGTGCTAGGACAGGTTCA 59.398 55.000 15.20 0.00 38.68 3.18
337 348 0.456312 CGACGTGCTAGGACAGGTTC 60.456 60.000 15.20 4.04 38.68 3.62
338 349 1.177256 ACGACGTGCTAGGACAGGTT 61.177 55.000 15.20 0.00 38.68 3.50
339 350 1.584380 GACGACGTGCTAGGACAGGT 61.584 60.000 15.20 8.30 41.09 4.00
340 351 1.136984 GACGACGTGCTAGGACAGG 59.863 63.158 15.20 5.10 0.00 4.00
341 352 1.226046 CGACGACGTGCTAGGACAG 60.226 63.158 15.20 9.57 34.56 3.51
342 353 1.668793 TCGACGACGTGCTAGGACA 60.669 57.895 15.20 0.00 40.69 4.02
343 354 1.225963 GTCGACGACGTGCTAGGAC 60.226 63.158 12.94 3.94 40.69 3.85
344 355 2.393768 GGTCGACGACGTGCTAGGA 61.394 63.158 20.92 0.00 40.69 2.94
345 356 1.919956 AAGGTCGACGACGTGCTAGG 61.920 60.000 22.45 0.00 40.69 3.02
346 357 0.793478 CAAGGTCGACGACGTGCTAG 60.793 60.000 22.45 10.26 40.69 3.42
347 358 1.208358 CAAGGTCGACGACGTGCTA 59.792 57.895 22.45 0.00 40.69 3.49
348 359 2.050351 CAAGGTCGACGACGTGCT 60.050 61.111 22.45 11.23 40.69 4.40
349 360 2.050714 TCAAGGTCGACGACGTGC 60.051 61.111 22.45 9.10 40.69 5.34
350 361 0.725118 GACTCAAGGTCGACGACGTG 60.725 60.000 22.45 20.53 40.69 4.49
351 362 1.573436 GACTCAAGGTCGACGACGT 59.427 57.895 20.92 18.93 40.69 4.34
352 363 4.436653 GACTCAAGGTCGACGACG 57.563 61.111 20.92 9.78 41.26 5.12
369 380 7.041372 ACACAAACTACAATTACCAGCTTACTG 60.041 37.037 0.00 0.00 44.05 2.74
370 381 6.996282 ACACAAACTACAATTACCAGCTTACT 59.004 34.615 0.00 0.00 0.00 2.24
371 382 7.198306 ACACAAACTACAATTACCAGCTTAC 57.802 36.000 0.00 0.00 0.00 2.34
372 383 7.811117 AACACAAACTACAATTACCAGCTTA 57.189 32.000 0.00 0.00 0.00 3.09
373 384 6.709018 AACACAAACTACAATTACCAGCTT 57.291 33.333 0.00 0.00 0.00 3.74
374 385 7.811117 TTAACACAAACTACAATTACCAGCT 57.189 32.000 0.00 0.00 0.00 4.24
375 386 8.347035 TCTTTAACACAAACTACAATTACCAGC 58.653 33.333 0.00 0.00 0.00 4.85
376 387 9.659830 GTCTTTAACACAAACTACAATTACCAG 57.340 33.333 0.00 0.00 0.00 4.00
377 388 8.623030 GGTCTTTAACACAAACTACAATTACCA 58.377 33.333 0.00 0.00 0.00 3.25
378 389 8.843262 AGGTCTTTAACACAAACTACAATTACC 58.157 33.333 0.00 0.00 0.00 2.85
381 392 8.745590 ACAAGGTCTTTAACACAAACTACAATT 58.254 29.630 0.00 0.00 0.00 2.32
382 393 8.288689 ACAAGGTCTTTAACACAAACTACAAT 57.711 30.769 0.00 0.00 0.00 2.71
383 394 7.690952 ACAAGGTCTTTAACACAAACTACAA 57.309 32.000 0.00 0.00 0.00 2.41
384 395 7.362229 CCAACAAGGTCTTTAACACAAACTACA 60.362 37.037 0.00 0.00 0.00 2.74
385 396 6.970613 CCAACAAGGTCTTTAACACAAACTAC 59.029 38.462 0.00 0.00 0.00 2.73
386 397 7.090953 CCAACAAGGTCTTTAACACAAACTA 57.909 36.000 0.00 0.00 0.00 2.24
387 398 5.961272 CCAACAAGGTCTTTAACACAAACT 58.039 37.500 0.00 0.00 0.00 2.66
402 413 8.857694 TTTAGGAGTAATAGAAACCAACAAGG 57.142 34.615 0.00 0.00 45.67 3.61
405 416 8.607713 TCCATTTAGGAGTAATAGAAACCAACA 58.392 33.333 0.00 0.00 43.07 3.33
422 433 2.498167 CCTCCTGCGATTCCATTTAGG 58.502 52.381 0.00 0.00 39.47 2.69
423 434 1.876156 GCCTCCTGCGATTCCATTTAG 59.124 52.381 0.00 0.00 0.00 1.85
427 438 2.512896 GGCCTCCTGCGATTCCAT 59.487 61.111 0.00 0.00 42.61 3.41
430 441 1.821332 CAAGGGCCTCCTGCGATTC 60.821 63.158 6.46 0.00 44.07 2.52
434 445 0.394352 ATTTACAAGGGCCTCCTGCG 60.394 55.000 6.46 0.00 44.07 5.18
436 447 3.696548 GAGAAATTTACAAGGGCCTCCTG 59.303 47.826 6.46 4.78 44.07 3.86
452 463 7.117667 ACAAAGCTCGTTTTGTTTTTGAGAAAT 59.882 29.630 6.13 0.00 46.18 2.17
464 475 3.178267 TGCTCAAACAAAGCTCGTTTTG 58.822 40.909 10.63 8.88 42.38 2.44
478 492 8.421002 AGGCTTCTTTAATTAAGTTTGCTCAAA 58.579 29.630 0.00 0.00 35.28 2.69
524 538 0.039888 CACCGTTAAACAAAGGGCCG 60.040 55.000 0.00 0.00 45.35 6.13
605 671 3.380142 CACATAATTTACCGGCCATTGC 58.620 45.455 0.00 0.00 0.00 3.56
606 672 3.383185 ACCACATAATTTACCGGCCATTG 59.617 43.478 0.00 0.00 0.00 2.82
618 684 1.373590 GGTCGCGGCACCACATAATT 61.374 55.000 14.93 0.00 36.32 1.40
619 685 1.817941 GGTCGCGGCACCACATAAT 60.818 57.895 14.93 0.00 36.32 1.28
641 707 3.018149 AGTCGAGTGGAGTATCTGAACC 58.982 50.000 0.00 0.00 33.73 3.62
643 709 3.942115 CTCAGTCGAGTGGAGTATCTGAA 59.058 47.826 19.86 0.00 34.29 3.02
692 759 1.274703 ATTGACGGTGGGCCTCTGAT 61.275 55.000 20.73 5.43 0.00 2.90
693 760 1.488705 AATTGACGGTGGGCCTCTGA 61.489 55.000 20.73 0.00 0.00 3.27
764 838 0.963225 TCTGTCCGTGTCGATTTCCA 59.037 50.000 0.00 0.00 0.00 3.53
767 841 6.106673 AGAATTAATCTGTCCGTGTCGATTT 58.893 36.000 0.00 0.00 36.88 2.17
880 954 3.535561 AGGCCTAAATGATTGACGTGAG 58.464 45.455 1.29 0.00 0.00 3.51
921 999 5.584649 CGGCCTGAATGATTTCTTTACTGTA 59.415 40.000 0.00 0.00 32.78 2.74
930 1009 1.532868 CGGATCGGCCTGAATGATTTC 59.467 52.381 0.00 0.00 0.00 2.17
939 1018 3.781307 TCCCAACGGATCGGCCTG 61.781 66.667 0.00 0.00 31.13 4.85
976 1055 1.846175 CTTTGGCGCGCTATTTAAAGC 59.154 47.619 32.29 11.34 39.21 3.51
1106 1185 1.335132 GGGGCTTCCATCGGTGACTA 61.335 60.000 0.00 0.00 35.00 2.59
1196 1275 4.309950 GGAGACGTTGTGGGCCGT 62.310 66.667 0.00 0.00 40.54 5.68
1445 1527 3.003763 GGGGTCTGGGAAGAGCGT 61.004 66.667 0.00 0.00 37.20 5.07
1560 1642 0.733150 CAGCGAGATGACGTACTCCA 59.267 55.000 10.01 0.00 35.59 3.86
1714 1799 0.040646 ACTCCACCATGGACTCCGTA 59.959 55.000 21.47 0.00 42.67 4.02
2055 2142 2.782045 CGTGCACGTGCGATCTCTG 61.782 63.158 33.22 14.67 45.83 3.35
2129 2216 0.104120 CCACTCACCGATAATGGCGA 59.896 55.000 0.00 0.00 0.00 5.54
2210 2297 5.777732 ACATTTGTAGCATACCTCCCAAAAA 59.222 36.000 0.00 0.00 42.12 1.94
2211 2298 5.329399 ACATTTGTAGCATACCTCCCAAAA 58.671 37.500 0.00 0.00 42.12 2.44
2212 2299 4.929479 ACATTTGTAGCATACCTCCCAAA 58.071 39.130 0.00 0.00 42.12 3.28
2213 2300 4.584638 ACATTTGTAGCATACCTCCCAA 57.415 40.909 0.00 0.00 42.12 4.12
2214 2301 5.290493 CTACATTTGTAGCATACCTCCCA 57.710 43.478 4.88 0.00 42.12 4.37
2266 2353 6.127196 TGGATTTACAAAGAAGGCTTGTGTTT 60.127 34.615 3.46 0.00 33.79 2.83
2267 2354 5.362430 TGGATTTACAAAGAAGGCTTGTGTT 59.638 36.000 3.46 0.00 33.79 3.32
2268 2355 4.892934 TGGATTTACAAAGAAGGCTTGTGT 59.107 37.500 3.46 8.71 33.79 3.72
2269 2356 5.222631 GTGGATTTACAAAGAAGGCTTGTG 58.777 41.667 3.46 2.32 33.79 3.33
2270 2357 4.280929 GGTGGATTTACAAAGAAGGCTTGT 59.719 41.667 3.46 0.00 33.79 3.16
2271 2358 4.615912 CGGTGGATTTACAAAGAAGGCTTG 60.616 45.833 3.46 0.00 33.79 4.01
2272 2359 3.506067 CGGTGGATTTACAAAGAAGGCTT 59.494 43.478 0.00 0.00 35.37 4.35
2273 2360 3.081804 CGGTGGATTTACAAAGAAGGCT 58.918 45.455 0.00 0.00 0.00 4.58
2274 2361 2.817844 ACGGTGGATTTACAAAGAAGGC 59.182 45.455 0.00 0.00 0.00 4.35
2275 2362 5.243207 ACTACGGTGGATTTACAAAGAAGG 58.757 41.667 0.00 0.00 0.00 3.46
2276 2363 6.796705 AACTACGGTGGATTTACAAAGAAG 57.203 37.500 0.00 0.00 0.00 2.85
2277 2364 7.571080 AAAACTACGGTGGATTTACAAAGAA 57.429 32.000 0.00 0.00 0.00 2.52
2278 2365 7.571080 AAAAACTACGGTGGATTTACAAAGA 57.429 32.000 0.00 0.00 0.00 2.52
2299 2386 5.878406 ATCCCACCACACAAACATAAAAA 57.122 34.783 0.00 0.00 0.00 1.94
2300 2387 8.690884 CATATATCCCACCACACAAACATAAAA 58.309 33.333 0.00 0.00 0.00 1.52
2301 2388 7.286546 CCATATATCCCACCACACAAACATAAA 59.713 37.037 0.00 0.00 0.00 1.40
2302 2389 6.775142 CCATATATCCCACCACACAAACATAA 59.225 38.462 0.00 0.00 0.00 1.90
2303 2390 6.303054 CCATATATCCCACCACACAAACATA 58.697 40.000 0.00 0.00 0.00 2.29
2304 2391 5.139727 CCATATATCCCACCACACAAACAT 58.860 41.667 0.00 0.00 0.00 2.71
2305 2392 4.531854 CCATATATCCCACCACACAAACA 58.468 43.478 0.00 0.00 0.00 2.83
2306 2393 3.317993 GCCATATATCCCACCACACAAAC 59.682 47.826 0.00 0.00 0.00 2.93
2307 2394 3.561143 GCCATATATCCCACCACACAAA 58.439 45.455 0.00 0.00 0.00 2.83
2308 2395 2.486370 CGCCATATATCCCACCACACAA 60.486 50.000 0.00 0.00 0.00 3.33
2309 2396 1.071542 CGCCATATATCCCACCACACA 59.928 52.381 0.00 0.00 0.00 3.72
2310 2397 1.346395 TCGCCATATATCCCACCACAC 59.654 52.381 0.00 0.00 0.00 3.82
2311 2398 1.723288 TCGCCATATATCCCACCACA 58.277 50.000 0.00 0.00 0.00 4.17
2312 2399 2.501723 AGATCGCCATATATCCCACCAC 59.498 50.000 0.00 0.00 0.00 4.16
2313 2400 2.766263 GAGATCGCCATATATCCCACCA 59.234 50.000 0.00 0.00 0.00 4.17
2314 2401 2.766263 TGAGATCGCCATATATCCCACC 59.234 50.000 0.00 0.00 0.00 4.61
2315 2402 4.471904 TTGAGATCGCCATATATCCCAC 57.528 45.455 0.00 0.00 0.00 4.61
2316 2403 5.698741 ATTTGAGATCGCCATATATCCCA 57.301 39.130 0.00 0.00 0.00 4.37
2317 2404 8.682936 AATTATTTGAGATCGCCATATATCCC 57.317 34.615 0.00 0.00 0.00 3.85
2318 2405 9.553064 AGAATTATTTGAGATCGCCATATATCC 57.447 33.333 0.00 0.00 0.00 2.59
2323 2410 9.996554 TTTCTAGAATTATTTGAGATCGCCATA 57.003 29.630 5.89 0.00 0.00 2.74
2324 2411 8.908786 TTTCTAGAATTATTTGAGATCGCCAT 57.091 30.769 5.89 0.00 0.00 4.40
2325 2412 8.731275 TTTTCTAGAATTATTTGAGATCGCCA 57.269 30.769 5.89 0.00 0.00 5.69
2326 2413 7.800847 GCTTTTCTAGAATTATTTGAGATCGCC 59.199 37.037 5.89 0.00 0.00 5.54
2327 2414 8.555361 AGCTTTTCTAGAATTATTTGAGATCGC 58.445 33.333 5.89 0.00 0.00 4.58
2339 2426 9.125026 TGTTTTCTCTTGAGCTTTTCTAGAATT 57.875 29.630 5.89 0.00 37.25 2.17
2340 2427 8.682936 TGTTTTCTCTTGAGCTTTTCTAGAAT 57.317 30.769 5.89 0.00 37.25 2.40
2341 2428 8.506168 TTGTTTTCTCTTGAGCTTTTCTAGAA 57.494 30.769 0.00 0.00 37.25 2.10
2342 2429 7.987458 TCTTGTTTTCTCTTGAGCTTTTCTAGA 59.013 33.333 0.00 0.00 36.46 2.43
2343 2430 8.067189 GTCTTGTTTTCTCTTGAGCTTTTCTAG 58.933 37.037 0.00 0.00 0.00 2.43
2344 2431 7.012421 GGTCTTGTTTTCTCTTGAGCTTTTCTA 59.988 37.037 0.00 0.00 0.00 2.10
2345 2432 6.183360 GGTCTTGTTTTCTCTTGAGCTTTTCT 60.183 38.462 0.00 0.00 0.00 2.52
2346 2433 5.974158 GGTCTTGTTTTCTCTTGAGCTTTTC 59.026 40.000 0.00 0.00 0.00 2.29
2347 2434 5.418840 TGGTCTTGTTTTCTCTTGAGCTTTT 59.581 36.000 0.00 0.00 0.00 2.27
2348 2435 4.949856 TGGTCTTGTTTTCTCTTGAGCTTT 59.050 37.500 0.00 0.00 0.00 3.51
2349 2436 4.526970 TGGTCTTGTTTTCTCTTGAGCTT 58.473 39.130 0.00 0.00 0.00 3.74
2350 2437 4.133078 CTGGTCTTGTTTTCTCTTGAGCT 58.867 43.478 0.00 0.00 0.00 4.09
2351 2438 3.304324 GCTGGTCTTGTTTTCTCTTGAGC 60.304 47.826 0.00 0.00 0.00 4.26
2352 2439 3.059325 CGCTGGTCTTGTTTTCTCTTGAG 60.059 47.826 0.00 0.00 0.00 3.02
2353 2440 2.872245 CGCTGGTCTTGTTTTCTCTTGA 59.128 45.455 0.00 0.00 0.00 3.02
2354 2441 2.614057 ACGCTGGTCTTGTTTTCTCTTG 59.386 45.455 0.00 0.00 0.00 3.02
2355 2442 2.919228 ACGCTGGTCTTGTTTTCTCTT 58.081 42.857 0.00 0.00 0.00 2.85
2356 2443 2.622064 ACGCTGGTCTTGTTTTCTCT 57.378 45.000 0.00 0.00 0.00 3.10
2357 2444 2.872858 AGAACGCTGGTCTTGTTTTCTC 59.127 45.455 0.00 0.00 0.00 2.87
2358 2445 2.919228 AGAACGCTGGTCTTGTTTTCT 58.081 42.857 0.00 0.00 0.00 2.52
2359 2446 4.434330 CGATAGAACGCTGGTCTTGTTTTC 60.434 45.833 1.57 0.00 39.76 2.29
2360 2447 3.432252 CGATAGAACGCTGGTCTTGTTTT 59.568 43.478 1.57 0.00 39.76 2.43
2361 2448 2.993899 CGATAGAACGCTGGTCTTGTTT 59.006 45.455 1.57 0.00 39.76 2.83
2362 2449 2.230508 TCGATAGAACGCTGGTCTTGTT 59.769 45.455 1.57 0.00 46.15 2.83
2363 2450 1.816835 TCGATAGAACGCTGGTCTTGT 59.183 47.619 1.57 0.00 46.15 3.16
2364 2451 2.561733 TCGATAGAACGCTGGTCTTG 57.438 50.000 1.57 0.00 46.15 3.02
2377 2464 8.768957 AGACCATAAATCAATGTGATCGATAG 57.231 34.615 0.00 0.00 35.76 2.08
2378 2465 9.559732 AAAGACCATAAATCAATGTGATCGATA 57.440 29.630 0.00 0.00 35.76 2.92
2379 2466 8.455903 AAAGACCATAAATCAATGTGATCGAT 57.544 30.769 0.00 0.00 35.76 3.59
2380 2467 7.012327 GGAAAGACCATAAATCAATGTGATCGA 59.988 37.037 0.00 0.00 35.82 3.59
2381 2468 7.134815 GGAAAGACCATAAATCAATGTGATCG 58.865 38.462 0.00 0.00 35.82 3.69
2382 2469 7.999679 TGGAAAGACCATAAATCAATGTGATC 58.000 34.615 0.00 0.00 44.64 2.92
2383 2470 7.959658 TGGAAAGACCATAAATCAATGTGAT 57.040 32.000 0.00 0.00 44.64 3.06
2395 2482 8.383175 ATCTAAACAAGAACTGGAAAGACCATA 58.617 33.333 0.00 0.00 42.24 2.74
2396 2483 7.234355 ATCTAAACAAGAACTGGAAAGACCAT 58.766 34.615 0.00 0.00 42.24 3.55
2397 2484 6.601332 ATCTAAACAAGAACTGGAAAGACCA 58.399 36.000 0.00 0.00 41.47 4.02
2398 2485 8.794335 ATATCTAAACAAGAACTGGAAAGACC 57.206 34.615 0.00 0.00 37.89 3.85
2402 2489 9.542462 CCGATATATCTAAACAAGAACTGGAAA 57.458 33.333 10.93 0.00 37.89 3.13
2403 2490 8.701895 ACCGATATATCTAAACAAGAACTGGAA 58.298 33.333 10.93 0.00 37.89 3.53
2404 2491 8.246430 ACCGATATATCTAAACAAGAACTGGA 57.754 34.615 10.93 0.00 37.89 3.86
2405 2492 8.888579 AACCGATATATCTAAACAAGAACTGG 57.111 34.615 10.93 2.67 37.89 4.00
2410 2497 9.675464 ACCAAAAACCGATATATCTAAACAAGA 57.325 29.630 10.93 0.00 39.02 3.02
2411 2498 9.931210 GACCAAAAACCGATATATCTAAACAAG 57.069 33.333 10.93 0.00 0.00 3.16
2412 2499 9.451002 TGACCAAAAACCGATATATCTAAACAA 57.549 29.630 10.93 0.00 0.00 2.83
2413 2500 8.885722 GTGACCAAAAACCGATATATCTAAACA 58.114 33.333 10.93 0.00 0.00 2.83
2414 2501 9.106070 AGTGACCAAAAACCGATATATCTAAAC 57.894 33.333 10.93 0.00 0.00 2.01
2415 2502 9.675464 AAGTGACCAAAAACCGATATATCTAAA 57.325 29.630 10.93 0.00 0.00 1.85
2417 2504 9.976511 CTAAGTGACCAAAAACCGATATATCTA 57.023 33.333 10.93 0.00 0.00 1.98
2418 2505 8.483758 ACTAAGTGACCAAAAACCGATATATCT 58.516 33.333 10.93 0.00 0.00 1.98
2419 2506 8.658499 ACTAAGTGACCAAAAACCGATATATC 57.342 34.615 2.34 2.34 0.00 1.63
2420 2507 9.760077 CTACTAAGTGACCAAAAACCGATATAT 57.240 33.333 0.00 0.00 0.00 0.86
2421 2508 7.707893 GCTACTAAGTGACCAAAAACCGATATA 59.292 37.037 0.00 0.00 0.00 0.86
2422 2509 6.537660 GCTACTAAGTGACCAAAAACCGATAT 59.462 38.462 0.00 0.00 0.00 1.63
2423 2510 5.870978 GCTACTAAGTGACCAAAAACCGATA 59.129 40.000 0.00 0.00 0.00 2.92
2424 2511 4.694037 GCTACTAAGTGACCAAAAACCGAT 59.306 41.667 0.00 0.00 0.00 4.18
2425 2512 4.060205 GCTACTAAGTGACCAAAAACCGA 58.940 43.478 0.00 0.00 0.00 4.69
2426 2513 4.062991 AGCTACTAAGTGACCAAAAACCG 58.937 43.478 0.00 0.00 0.00 4.44
2427 2514 5.061179 TCAGCTACTAAGTGACCAAAAACC 58.939 41.667 0.00 0.00 0.00 3.27
2428 2515 6.260271 ACTTCAGCTACTAAGTGACCAAAAAC 59.740 38.462 7.32 0.00 34.70 2.43
2429 2516 6.354130 ACTTCAGCTACTAAGTGACCAAAAA 58.646 36.000 7.32 0.00 34.70 1.94
2430 2517 5.925509 ACTTCAGCTACTAAGTGACCAAAA 58.074 37.500 7.32 0.00 34.70 2.44
2431 2518 5.069914 TGACTTCAGCTACTAAGTGACCAAA 59.930 40.000 11.74 0.00 36.10 3.28
2432 2519 4.587262 TGACTTCAGCTACTAAGTGACCAA 59.413 41.667 11.74 0.00 36.10 3.67
2433 2520 4.149598 TGACTTCAGCTACTAAGTGACCA 58.850 43.478 11.74 3.39 36.10 4.02
2434 2521 4.785511 TGACTTCAGCTACTAAGTGACC 57.214 45.455 11.74 1.28 36.10 4.02
2435 2522 5.774630 ACTTGACTTCAGCTACTAAGTGAC 58.225 41.667 11.74 1.84 36.10 3.67
2436 2523 5.047943 GGACTTGACTTCAGCTACTAAGTGA 60.048 44.000 11.74 2.71 36.10 3.41
2437 2524 5.164954 GGACTTGACTTCAGCTACTAAGTG 58.835 45.833 11.74 2.83 36.10 3.16
2438 2525 4.221041 GGGACTTGACTTCAGCTACTAAGT 59.779 45.833 7.74 7.74 38.62 2.24
2439 2526 4.464597 AGGGACTTGACTTCAGCTACTAAG 59.535 45.833 0.00 0.00 27.25 2.18
2440 2527 4.417437 AGGGACTTGACTTCAGCTACTAA 58.583 43.478 0.00 0.00 27.25 2.24
2441 2528 4.048970 AGGGACTTGACTTCAGCTACTA 57.951 45.455 0.00 0.00 27.25 1.82
2442 2529 2.896039 AGGGACTTGACTTCAGCTACT 58.104 47.619 0.00 0.00 27.25 2.57
2457 2544 8.530269 AATAAACATTATCGATCGTAAGGGAC 57.470 34.615 15.94 0.00 38.47 4.46
2458 2545 7.816031 GGAATAAACATTATCGATCGTAAGGGA 59.184 37.037 15.94 5.79 38.47 4.20
2459 2546 7.817962 AGGAATAAACATTATCGATCGTAAGGG 59.182 37.037 15.94 11.18 38.47 3.95
2460 2547 8.758633 AGGAATAAACATTATCGATCGTAAGG 57.241 34.615 15.94 15.66 38.47 2.69
2461 2548 9.406828 TGAGGAATAAACATTATCGATCGTAAG 57.593 33.333 15.94 4.78 0.00 2.34
2462 2549 9.406828 CTGAGGAATAAACATTATCGATCGTAA 57.593 33.333 15.94 12.91 0.00 3.18
2463 2550 8.789762 TCTGAGGAATAAACATTATCGATCGTA 58.210 33.333 15.94 4.20 0.00 3.43
2464 2551 7.658261 TCTGAGGAATAAACATTATCGATCGT 58.342 34.615 15.94 5.23 0.00 3.73
2465 2552 8.520835 TTCTGAGGAATAAACATTATCGATCG 57.479 34.615 9.36 9.36 0.00 3.69
2467 2554 9.838339 AGTTTCTGAGGAATAAACATTATCGAT 57.162 29.630 2.16 2.16 35.93 3.59
2468 2555 9.667107 AAGTTTCTGAGGAATAAACATTATCGA 57.333 29.630 0.00 0.00 35.93 3.59
2478 2565 8.784043 GCTGTTCTAAAAGTTTCTGAGGAATAA 58.216 33.333 0.00 0.00 0.00 1.40
2479 2566 7.117812 CGCTGTTCTAAAAGTTTCTGAGGAATA 59.882 37.037 0.00 0.00 0.00 1.75
2480 2567 6.073003 CGCTGTTCTAAAAGTTTCTGAGGAAT 60.073 38.462 0.00 0.00 0.00 3.01
2481 2568 5.236478 CGCTGTTCTAAAAGTTTCTGAGGAA 59.764 40.000 0.00 0.00 0.00 3.36
2482 2569 4.750098 CGCTGTTCTAAAAGTTTCTGAGGA 59.250 41.667 0.00 0.00 0.00 3.71
2483 2570 4.511826 ACGCTGTTCTAAAAGTTTCTGAGG 59.488 41.667 0.00 0.00 0.00 3.86
2484 2571 5.659048 ACGCTGTTCTAAAAGTTTCTGAG 57.341 39.130 0.00 0.00 0.00 3.35
2485 2572 5.729454 GCAACGCTGTTCTAAAAGTTTCTGA 60.729 40.000 0.00 0.00 0.00 3.27
2486 2573 4.437820 GCAACGCTGTTCTAAAAGTTTCTG 59.562 41.667 0.00 0.00 0.00 3.02
2487 2574 4.095782 TGCAACGCTGTTCTAAAAGTTTCT 59.904 37.500 0.00 0.00 0.00 2.52
2488 2575 4.347813 TGCAACGCTGTTCTAAAAGTTTC 58.652 39.130 0.00 0.00 0.00 2.78
2489 2576 4.095782 TCTGCAACGCTGTTCTAAAAGTTT 59.904 37.500 0.00 0.00 0.00 2.66
2490 2577 3.625764 TCTGCAACGCTGTTCTAAAAGTT 59.374 39.130 0.00 0.00 0.00 2.66
2491 2578 3.202906 TCTGCAACGCTGTTCTAAAAGT 58.797 40.909 0.00 0.00 0.00 2.66
2492 2579 3.878086 TCTGCAACGCTGTTCTAAAAG 57.122 42.857 0.00 0.00 0.00 2.27
2493 2580 4.036262 ACAATCTGCAACGCTGTTCTAAAA 59.964 37.500 0.00 0.00 0.00 1.52
2494 2581 3.563808 ACAATCTGCAACGCTGTTCTAAA 59.436 39.130 0.00 0.00 0.00 1.85
2495 2582 3.138304 ACAATCTGCAACGCTGTTCTAA 58.862 40.909 0.00 0.00 0.00 2.10
2496 2583 2.736721 GACAATCTGCAACGCTGTTCTA 59.263 45.455 0.00 0.00 0.00 2.10
2497 2584 1.532868 GACAATCTGCAACGCTGTTCT 59.467 47.619 0.00 0.00 0.00 3.01
2498 2585 1.532868 AGACAATCTGCAACGCTGTTC 59.467 47.619 0.00 0.00 0.00 3.18
2499 2586 1.265095 CAGACAATCTGCAACGCTGTT 59.735 47.619 0.00 0.00 37.72 3.16
2500 2587 0.870393 CAGACAATCTGCAACGCTGT 59.130 50.000 0.00 0.00 37.72 4.40
2501 2588 1.136141 GTCAGACAATCTGCAACGCTG 60.136 52.381 0.74 0.00 43.95 5.18
2502 2589 1.151668 GTCAGACAATCTGCAACGCT 58.848 50.000 0.74 0.00 43.95 5.07
2503 2590 0.867746 TGTCAGACAATCTGCAACGC 59.132 50.000 0.00 0.00 43.95 4.84
2504 2591 2.096069 CCTTGTCAGACAATCTGCAACG 60.096 50.000 16.53 2.49 43.95 4.10
2505 2592 2.880890 ACCTTGTCAGACAATCTGCAAC 59.119 45.455 16.53 0.00 43.95 4.17
2506 2593 3.213206 ACCTTGTCAGACAATCTGCAA 57.787 42.857 16.53 12.13 43.95 4.08
2507 2594 2.936919 ACCTTGTCAGACAATCTGCA 57.063 45.000 16.53 0.00 43.95 4.41
2508 2595 7.066284 ACAATTATACCTTGTCAGACAATCTGC 59.934 37.037 16.53 0.00 43.95 4.26
2509 2596 8.498054 ACAATTATACCTTGTCAGACAATCTG 57.502 34.615 16.53 10.52 45.59 2.90
2510 2597 9.167311 GAACAATTATACCTTGTCAGACAATCT 57.833 33.333 16.53 7.19 37.48 2.40
2511 2598 9.167311 AGAACAATTATACCTTGTCAGACAATC 57.833 33.333 16.53 6.71 37.48 2.67
2512 2599 8.950210 CAGAACAATTATACCTTGTCAGACAAT 58.050 33.333 16.53 5.57 37.48 2.71
2513 2600 8.154203 TCAGAACAATTATACCTTGTCAGACAA 58.846 33.333 15.39 15.39 35.84 3.18
2514 2601 7.676004 TCAGAACAATTATACCTTGTCAGACA 58.324 34.615 0.00 0.00 35.84 3.41
2515 2602 7.819900 ACTCAGAACAATTATACCTTGTCAGAC 59.180 37.037 0.00 0.00 35.84 3.51
2516 2603 7.907389 ACTCAGAACAATTATACCTTGTCAGA 58.093 34.615 1.42 0.92 35.84 3.27
2517 2604 8.553459 AACTCAGAACAATTATACCTTGTCAG 57.447 34.615 1.42 0.23 35.84 3.51
2518 2605 9.653287 CTAACTCAGAACAATTATACCTTGTCA 57.347 33.333 1.42 0.00 35.84 3.58
2519 2606 8.604890 GCTAACTCAGAACAATTATACCTTGTC 58.395 37.037 1.42 0.00 35.84 3.18
2520 2607 8.322091 AGCTAACTCAGAACAATTATACCTTGT 58.678 33.333 0.00 0.00 38.44 3.16
2521 2608 8.723942 AGCTAACTCAGAACAATTATACCTTG 57.276 34.615 0.00 0.00 0.00 3.61
2522 2609 9.819267 GTAGCTAACTCAGAACAATTATACCTT 57.181 33.333 0.00 0.00 0.00 3.50
2523 2610 8.136165 CGTAGCTAACTCAGAACAATTATACCT 58.864 37.037 0.00 0.00 0.00 3.08
2524 2611 7.381678 CCGTAGCTAACTCAGAACAATTATACC 59.618 40.741 0.00 0.00 0.00 2.73
2525 2612 7.096147 GCCGTAGCTAACTCAGAACAATTATAC 60.096 40.741 0.00 0.00 35.50 1.47
2526 2613 6.921857 GCCGTAGCTAACTCAGAACAATTATA 59.078 38.462 0.00 0.00 35.50 0.98
2527 2614 5.753921 GCCGTAGCTAACTCAGAACAATTAT 59.246 40.000 0.00 0.00 35.50 1.28
2528 2615 5.107133 GCCGTAGCTAACTCAGAACAATTA 58.893 41.667 0.00 0.00 35.50 1.40
2529 2616 3.933332 GCCGTAGCTAACTCAGAACAATT 59.067 43.478 0.00 0.00 35.50 2.32
2530 2617 3.522553 GCCGTAGCTAACTCAGAACAAT 58.477 45.455 0.00 0.00 35.50 2.71
2531 2618 2.955614 GCCGTAGCTAACTCAGAACAA 58.044 47.619 0.00 0.00 35.50 2.83
2532 2619 2.649331 GCCGTAGCTAACTCAGAACA 57.351 50.000 0.00 0.00 35.50 3.18
2544 2631 3.188786 CGAGCCACAAGCCGTAGC 61.189 66.667 0.00 0.00 45.47 3.58
2545 2632 2.509336 CCGAGCCACAAGCCGTAG 60.509 66.667 0.00 0.00 45.47 3.51
2546 2633 4.752879 GCCGAGCCACAAGCCGTA 62.753 66.667 0.00 0.00 45.47 4.02
2549 2636 4.704833 TCTGCCGAGCCACAAGCC 62.705 66.667 0.00 0.00 45.47 4.35
2550 2637 3.123620 CTCTGCCGAGCCACAAGC 61.124 66.667 0.00 0.00 44.25 4.01
2551 2638 2.435586 CCTCTGCCGAGCCACAAG 60.436 66.667 0.00 0.00 35.90 3.16
2552 2639 2.922503 TCCTCTGCCGAGCCACAA 60.923 61.111 0.00 0.00 35.90 3.33
2553 2640 3.695606 GTCCTCTGCCGAGCCACA 61.696 66.667 0.00 0.00 35.90 4.17
2554 2641 4.459089 GGTCCTCTGCCGAGCCAC 62.459 72.222 0.00 0.00 35.90 5.01
2555 2642 4.704103 AGGTCCTCTGCCGAGCCA 62.704 66.667 0.00 0.00 35.90 4.75
2556 2643 3.378399 GAAGGTCCTCTGCCGAGCC 62.378 68.421 0.00 0.00 35.90 4.70
2557 2644 1.965754 ATGAAGGTCCTCTGCCGAGC 61.966 60.000 0.00 0.00 35.90 5.03
2558 2645 0.539051 AATGAAGGTCCTCTGCCGAG 59.461 55.000 0.00 0.00 37.01 4.63
2559 2646 0.984230 AAATGAAGGTCCTCTGCCGA 59.016 50.000 0.00 0.00 0.00 5.54
2560 2647 2.691409 TAAATGAAGGTCCTCTGCCG 57.309 50.000 0.00 0.00 0.00 5.69
2561 2648 4.526970 TCAATAAATGAAGGTCCTCTGCC 58.473 43.478 0.00 0.00 34.30 4.85
2562 2649 4.578105 CCTCAATAAATGAAGGTCCTCTGC 59.422 45.833 0.00 0.00 37.67 4.26
2563 2650 5.994250 TCCTCAATAAATGAAGGTCCTCTG 58.006 41.667 0.00 0.00 37.67 3.35
2564 2651 6.619023 AGATCCTCAATAAATGAAGGTCCTCT 59.381 38.462 0.00 0.00 37.67 3.69
2565 2652 6.836242 AGATCCTCAATAAATGAAGGTCCTC 58.164 40.000 0.00 0.00 37.67 3.71
2566 2653 6.619023 AGAGATCCTCAATAAATGAAGGTCCT 59.381 38.462 0.00 0.00 37.67 3.85
2567 2654 6.836242 AGAGATCCTCAATAAATGAAGGTCC 58.164 40.000 0.00 0.00 37.67 4.46
2568 2655 7.255070 GCAAGAGATCCTCAATAAATGAAGGTC 60.255 40.741 0.00 0.00 37.67 3.85
2569 2656 6.545298 GCAAGAGATCCTCAATAAATGAAGGT 59.455 38.462 0.00 0.00 37.67 3.50
2570 2657 6.771749 AGCAAGAGATCCTCAATAAATGAAGG 59.228 38.462 0.00 0.00 37.67 3.46
2571 2658 7.255173 CCAGCAAGAGATCCTCAATAAATGAAG 60.255 40.741 0.00 0.00 37.67 3.02
2572 2659 6.544931 CCAGCAAGAGATCCTCAATAAATGAA 59.455 38.462 0.00 0.00 37.67 2.57
2573 2660 6.060136 CCAGCAAGAGATCCTCAATAAATGA 58.940 40.000 0.00 0.00 36.38 2.57
2574 2661 6.060136 TCCAGCAAGAGATCCTCAATAAATG 58.940 40.000 0.00 0.00 32.06 2.32
2575 2662 6.257994 TCCAGCAAGAGATCCTCAATAAAT 57.742 37.500 0.00 0.00 32.06 1.40
2576 2663 5.698741 TCCAGCAAGAGATCCTCAATAAA 57.301 39.130 0.00 0.00 32.06 1.40
2577 2664 5.426509 TCTTCCAGCAAGAGATCCTCAATAA 59.573 40.000 0.00 0.00 36.08 1.40
2578 2665 4.964897 TCTTCCAGCAAGAGATCCTCAATA 59.035 41.667 0.00 0.00 36.08 1.90
2579 2666 3.779183 TCTTCCAGCAAGAGATCCTCAAT 59.221 43.478 0.00 0.00 36.08 2.57
2580 2667 3.176411 TCTTCCAGCAAGAGATCCTCAA 58.824 45.455 0.00 0.00 36.08 3.02
2581 2668 2.825223 TCTTCCAGCAAGAGATCCTCA 58.175 47.619 0.00 0.00 36.08 3.86
2582 2669 4.420522 AATCTTCCAGCAAGAGATCCTC 57.579 45.455 0.00 0.00 44.71 3.71
2583 2670 7.071698 TGTTATAATCTTCCAGCAAGAGATCCT 59.928 37.037 0.00 0.00 44.71 3.24
2584 2671 7.172361 GTGTTATAATCTTCCAGCAAGAGATCC 59.828 40.741 0.00 0.00 44.71 3.36
2585 2672 7.930865 AGTGTTATAATCTTCCAGCAAGAGATC 59.069 37.037 0.00 0.00 44.71 2.75
2586 2673 7.800092 AGTGTTATAATCTTCCAGCAAGAGAT 58.200 34.615 0.00 0.00 44.71 2.75
2587 2674 7.187824 AGTGTTATAATCTTCCAGCAAGAGA 57.812 36.000 0.00 0.00 44.71 3.10
2588 2675 9.202273 GATAGTGTTATAATCTTCCAGCAAGAG 57.798 37.037 0.00 0.00 44.71 2.85
2589 2676 8.928448 AGATAGTGTTATAATCTTCCAGCAAGA 58.072 33.333 0.00 0.00 45.60 3.02
2590 2677 9.553064 AAGATAGTGTTATAATCTTCCAGCAAG 57.447 33.333 0.00 0.00 35.55 4.01
2646 2733 6.844097 TGGTTGAAAAGGTGTTCTACTTTT 57.156 33.333 0.00 0.00 46.32 2.27
2647 2734 6.183360 CCATGGTTGAAAAGGTGTTCTACTTT 60.183 38.462 2.57 0.00 38.48 2.66
2648 2735 5.301805 CCATGGTTGAAAAGGTGTTCTACTT 59.698 40.000 2.57 0.00 34.79 2.24
2649 2736 4.827284 CCATGGTTGAAAAGGTGTTCTACT 59.173 41.667 2.57 0.00 34.79 2.57
2650 2737 4.825085 TCCATGGTTGAAAAGGTGTTCTAC 59.175 41.667 12.58 0.00 33.97 2.59
2651 2738 5.055265 TCCATGGTTGAAAAGGTGTTCTA 57.945 39.130 12.58 0.00 0.00 2.10
2652 2739 3.909732 TCCATGGTTGAAAAGGTGTTCT 58.090 40.909 12.58 0.00 0.00 3.01
2653 2740 4.664150 TTCCATGGTTGAAAAGGTGTTC 57.336 40.909 12.58 0.00 0.00 3.18
2654 2741 4.714308 TCTTTCCATGGTTGAAAAGGTGTT 59.286 37.500 18.62 0.00 31.77 3.32
2655 2742 4.285863 TCTTTCCATGGTTGAAAAGGTGT 58.714 39.130 18.62 0.00 31.77 4.16
2656 2743 4.935352 TCTTTCCATGGTTGAAAAGGTG 57.065 40.909 18.62 1.11 31.77 4.00
2657 2744 5.948742 TTTCTTTCCATGGTTGAAAAGGT 57.051 34.783 18.62 0.00 31.77 3.50
2658 2745 6.146021 CGATTTTCTTTCCATGGTTGAAAAGG 59.854 38.462 27.77 22.41 39.11 3.11
2659 2746 6.701400 ACGATTTTCTTTCCATGGTTGAAAAG 59.299 34.615 27.77 22.47 39.11 2.27
2660 2747 6.578023 ACGATTTTCTTTCCATGGTTGAAAA 58.422 32.000 27.06 27.06 39.74 2.29
2661 2748 6.155475 ACGATTTTCTTTCCATGGTTGAAA 57.845 33.333 12.58 16.36 0.00 2.69
2662 2749 5.782893 ACGATTTTCTTTCCATGGTTGAA 57.217 34.783 12.58 11.55 0.00 2.69
2663 2750 7.201574 CGTATACGATTTTCTTTCCATGGTTGA 60.202 37.037 20.58 5.84 43.02 3.18
2664 2751 6.905076 CGTATACGATTTTCTTTCCATGGTTG 59.095 38.462 20.58 3.38 43.02 3.77
2665 2752 6.819649 TCGTATACGATTTTCTTTCCATGGTT 59.180 34.615 23.54 0.00 44.22 3.67
2666 2753 6.342906 TCGTATACGATTTTCTTTCCATGGT 58.657 36.000 23.54 0.00 44.22 3.55
2667 2754 6.838198 TCGTATACGATTTTCTTTCCATGG 57.162 37.500 23.54 4.97 44.22 3.66
2696 2783 0.033642 TCCCGTTTGTGCATGTACGA 59.966 50.000 15.91 4.47 36.16 3.43
2703 2790 2.112297 GGGTCTCCCGTTTGTGCA 59.888 61.111 0.00 0.00 32.13 4.57
2729 2816 1.937362 GGTTTGCAACGTGTCGCAC 60.937 57.895 0.00 0.00 38.00 5.34
2740 2827 1.952990 TGCTTTGAGATTCGGTTTGCA 59.047 42.857 0.00 0.00 0.00 4.08
2744 2831 1.168714 GGCTGCTTTGAGATTCGGTT 58.831 50.000 0.00 0.00 0.00 4.44
2806 2893 0.443869 CGGCTGGAGTTTGAACATCG 59.556 55.000 0.00 0.00 0.00 3.84
2869 2956 2.309528 AGTTGCACTTGTCTTCGACA 57.690 45.000 0.00 0.00 41.09 4.35
2880 2967 0.886490 CCGAGCTGGAAAGTTGCACT 60.886 55.000 0.00 0.00 42.00 4.40
2961 3050 2.511600 CCGACGGGGACAAGCATC 60.512 66.667 5.81 0.00 38.47 3.91
3029 4510 1.070786 GTCACCGGAGCAAGGAACA 59.929 57.895 9.46 0.00 0.00 3.18
3065 4546 3.985279 GCGACGGACATAATATAGCACAA 59.015 43.478 0.00 0.00 0.00 3.33
3067 4548 2.921754 GGCGACGGACATAATATAGCAC 59.078 50.000 0.00 0.00 0.00 4.40
3090 4571 2.158798 TCGTCATCTCTACCCATCTCGT 60.159 50.000 0.00 0.00 0.00 4.18
3100 4581 5.362717 ACCATACAAACCATCGTCATCTCTA 59.637 40.000 0.00 0.00 0.00 2.43
3110 4591 2.014128 CCCACGACCATACAAACCATC 58.986 52.381 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.