Multiple sequence alignment - TraesCS1A01G418600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G418600 chr1A 100.000 2741 0 0 1 2741 575806774 575809514 0.000000e+00 5062.0
1 TraesCS1A01G418600 chr1D 86.176 2380 156 76 440 2741 479539714 479541998 0.000000e+00 2412.0
2 TraesCS1A01G418600 chr1D 78.696 230 28 13 2251 2478 479558448 479558658 1.710000e-27 134.0
3 TraesCS1A01G418600 chr1D 84.921 126 15 2 2614 2739 479558799 479558920 1.030000e-24 124.0
4 TraesCS1A01G418600 chr1B 85.617 1175 70 34 787 1898 667749507 667750645 0.000000e+00 1142.0
5 TraesCS1A01G418600 chr1B 84.426 244 31 2 2 238 667741722 667741965 1.640000e-57 233.0
6 TraesCS1A01G418600 chr1B 90.960 177 9 5 2566 2741 667751408 667751578 5.900000e-57 231.0
7 TraesCS1A01G418600 chr1B 93.617 47 2 1 659 704 667746431 667746477 4.900000e-08 69.4
8 TraesCS1A01G418600 chr5A 88.732 284 29 3 2152 2434 492622276 492622557 7.270000e-91 344.0
9 TraesCS1A01G418600 chr5A 78.613 173 35 2 1525 1696 459775648 459775477 2.230000e-21 113.0
10 TraesCS1A01G418600 chr3B 82.857 175 28 2 1522 1695 416135498 416135325 3.650000e-34 156.0
11 TraesCS1A01G418600 chr3A 82.584 178 29 2 1519 1695 423672114 423672290 3.650000e-34 156.0
12 TraesCS1A01G418600 chr3D 82.184 174 31 0 1522 1695 305622627 305622800 1.700000e-32 150.0
13 TraesCS1A01G418600 chr4D 76.163 172 41 0 1525 1696 61852304 61852475 1.050000e-14 91.6
14 TraesCS1A01G418600 chr4B 75.429 175 43 0 1525 1699 90892347 90892173 4.860000e-13 86.1
15 TraesCS1A01G418600 chr4A 75.581 172 42 0 1525 1696 535035694 535035865 4.860000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G418600 chr1A 575806774 575809514 2740 False 5062.0 5062 100.000000 1 2741 1 chr1A.!!$F1 2740
1 TraesCS1A01G418600 chr1D 479539714 479541998 2284 False 2412.0 2412 86.176000 440 2741 1 chr1D.!!$F1 2301
2 TraesCS1A01G418600 chr1B 667746431 667751578 5147 False 480.8 1142 90.064667 659 2741 3 chr1B.!!$F2 2082

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
964 3925 0.032615 AAACCACAAGAGGCCAACCA 60.033 50.0 5.01 0.0 39.06 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1767 4817 0.815615 GATGTGGGGATTCGTGAGCC 60.816 60.0 0.0 0.0 0.0 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.281371 AGCTGTGTACTATAGATCGTAAATACA 57.719 33.333 6.78 0.00 0.00 2.29
29 30 9.888878 GCTGTGTACTATAGATCGTAAATACAA 57.111 33.333 6.78 0.00 0.00 2.41
41 42 9.840427 AGATCGTAAATACAAATTCTGTTTTGG 57.160 29.630 9.44 0.00 40.20 3.28
42 43 9.620660 GATCGTAAATACAAATTCTGTTTTGGT 57.379 29.630 9.44 0.00 40.20 3.67
43 44 9.620660 ATCGTAAATACAAATTCTGTTTTGGTC 57.379 29.630 9.44 0.00 40.20 4.02
44 45 8.622157 TCGTAAATACAAATTCTGTTTTGGTCA 58.378 29.630 9.44 0.00 40.20 4.02
45 46 9.239002 CGTAAATACAAATTCTGTTTTGGTCAA 57.761 29.630 9.44 0.00 40.20 3.18
48 49 9.883142 AAATACAAATTCTGTTTTGGTCAAAGA 57.117 25.926 9.44 0.00 40.20 2.52
51 52 8.424274 ACAAATTCTGTTTTGGTCAAAGATTC 57.576 30.769 9.44 0.00 40.20 2.52
52 53 8.040132 ACAAATTCTGTTTTGGTCAAAGATTCA 58.960 29.630 9.44 0.00 40.20 2.57
53 54 9.048446 CAAATTCTGTTTTGGTCAAAGATTCAT 57.952 29.630 0.00 0.00 33.81 2.57
56 57 9.865321 ATTCTGTTTTGGTCAAAGATTCATATG 57.135 29.630 0.00 0.00 0.00 1.78
57 58 7.829725 TCTGTTTTGGTCAAAGATTCATATGG 58.170 34.615 2.13 0.00 0.00 2.74
58 59 7.669304 TCTGTTTTGGTCAAAGATTCATATGGA 59.331 33.333 2.13 0.00 0.00 3.41
59 60 8.187913 TGTTTTGGTCAAAGATTCATATGGAA 57.812 30.769 2.13 0.00 40.46 3.53
60 61 8.087750 TGTTTTGGTCAAAGATTCATATGGAAC 58.912 33.333 2.13 0.00 38.60 3.62
74 75 2.937469 TGGAACAAACTTGCACACTG 57.063 45.000 0.00 0.00 31.92 3.66
75 76 2.166829 TGGAACAAACTTGCACACTGT 58.833 42.857 0.00 0.00 31.92 3.55
76 77 2.163412 TGGAACAAACTTGCACACTGTC 59.837 45.455 0.00 0.00 31.92 3.51
77 78 2.423538 GGAACAAACTTGCACACTGTCT 59.576 45.455 0.00 0.00 0.00 3.41
78 79 3.119495 GGAACAAACTTGCACACTGTCTT 60.119 43.478 0.00 0.00 0.00 3.01
79 80 4.095782 GGAACAAACTTGCACACTGTCTTA 59.904 41.667 0.00 0.00 0.00 2.10
80 81 5.392595 GGAACAAACTTGCACACTGTCTTAA 60.393 40.000 0.00 0.00 0.00 1.85
81 82 5.637006 ACAAACTTGCACACTGTCTTAAA 57.363 34.783 0.00 0.00 0.00 1.52
82 83 6.207691 ACAAACTTGCACACTGTCTTAAAT 57.792 33.333 0.00 0.00 0.00 1.40
83 84 6.265577 ACAAACTTGCACACTGTCTTAAATC 58.734 36.000 0.00 0.00 0.00 2.17
84 85 5.438761 AACTTGCACACTGTCTTAAATCC 57.561 39.130 0.00 0.00 0.00 3.01
85 86 4.718961 ACTTGCACACTGTCTTAAATCCT 58.281 39.130 0.00 0.00 0.00 3.24
86 87 5.133221 ACTTGCACACTGTCTTAAATCCTT 58.867 37.500 0.00 0.00 0.00 3.36
87 88 6.296026 ACTTGCACACTGTCTTAAATCCTTA 58.704 36.000 0.00 0.00 0.00 2.69
88 89 6.770785 ACTTGCACACTGTCTTAAATCCTTAA 59.229 34.615 0.00 0.00 0.00 1.85
89 90 7.284489 ACTTGCACACTGTCTTAAATCCTTAAA 59.716 33.333 0.00 0.00 0.00 1.52
90 91 6.966021 TGCACACTGTCTTAAATCCTTAAAC 58.034 36.000 0.00 0.00 0.00 2.01
91 92 6.544197 TGCACACTGTCTTAAATCCTTAAACA 59.456 34.615 0.00 0.00 0.00 2.83
92 93 6.856426 GCACACTGTCTTAAATCCTTAAACAC 59.144 38.462 0.00 0.00 0.00 3.32
93 94 7.069569 CACACTGTCTTAAATCCTTAAACACG 58.930 38.462 0.00 0.00 0.00 4.49
94 95 6.764560 ACACTGTCTTAAATCCTTAAACACGT 59.235 34.615 0.00 0.00 0.00 4.49
95 96 7.069569 CACTGTCTTAAATCCTTAAACACGTG 58.930 38.462 15.48 15.48 0.00 4.49
96 97 6.204108 ACTGTCTTAAATCCTTAAACACGTGG 59.796 38.462 21.57 0.00 0.00 4.94
97 98 6.289834 TGTCTTAAATCCTTAAACACGTGGA 58.710 36.000 21.57 6.50 0.00 4.02
98 99 6.203338 TGTCTTAAATCCTTAAACACGTGGAC 59.797 38.462 21.57 12.00 0.00 4.02
99 100 5.702209 TCTTAAATCCTTAAACACGTGGACC 59.298 40.000 21.57 0.00 0.00 4.46
100 101 3.495434 AATCCTTAAACACGTGGACCA 57.505 42.857 21.57 0.00 0.00 4.02
101 102 3.713826 ATCCTTAAACACGTGGACCAT 57.286 42.857 21.57 3.35 0.00 3.55
102 103 2.773487 TCCTTAAACACGTGGACCATG 58.227 47.619 21.57 12.41 0.00 3.66
103 104 1.810151 CCTTAAACACGTGGACCATGG 59.190 52.381 21.57 11.19 0.00 3.66
104 105 1.199097 CTTAAACACGTGGACCATGGC 59.801 52.381 21.57 4.47 0.00 4.40
105 106 0.398696 TAAACACGTGGACCATGGCT 59.601 50.000 21.57 0.00 0.00 4.75
106 107 0.889186 AAACACGTGGACCATGGCTC 60.889 55.000 21.57 8.70 0.00 4.70
107 108 2.436646 CACGTGGACCATGGCTCC 60.437 66.667 18.07 20.48 0.00 4.70
108 109 4.082523 ACGTGGACCATGGCTCCG 62.083 66.667 18.07 16.53 0.00 4.63
119 120 4.115199 GGCTCCGCCTGGATGGTT 62.115 66.667 0.00 0.00 46.69 3.67
120 121 2.742116 GGCTCCGCCTGGATGGTTA 61.742 63.158 0.00 0.00 46.69 2.85
121 122 1.223487 GCTCCGCCTGGATGGTTAA 59.777 57.895 0.00 0.00 45.33 2.01
122 123 0.815615 GCTCCGCCTGGATGGTTAAG 60.816 60.000 0.00 0.00 45.33 1.85
123 124 0.830648 CTCCGCCTGGATGGTTAAGA 59.169 55.000 0.00 0.00 45.33 2.10
124 125 0.830648 TCCGCCTGGATGGTTAAGAG 59.169 55.000 0.00 0.00 40.17 2.85
125 126 0.179045 CCGCCTGGATGGTTAAGAGG 60.179 60.000 0.00 0.00 37.49 3.69
126 127 0.541863 CGCCTGGATGGTTAAGAGGT 59.458 55.000 0.00 0.00 38.35 3.85
127 128 1.743772 CGCCTGGATGGTTAAGAGGTG 60.744 57.143 0.00 0.00 38.35 4.00
128 129 2.019156 GCCTGGATGGTTAAGAGGTGC 61.019 57.143 0.00 0.00 38.35 5.01
129 130 1.408822 CCTGGATGGTTAAGAGGTGCC 60.409 57.143 0.00 0.00 0.00 5.01
130 131 1.281867 CTGGATGGTTAAGAGGTGCCA 59.718 52.381 0.00 0.00 35.28 4.92
131 132 1.707989 TGGATGGTTAAGAGGTGCCAA 59.292 47.619 0.00 0.00 34.39 4.52
132 133 2.109128 TGGATGGTTAAGAGGTGCCAAA 59.891 45.455 0.00 0.00 34.39 3.28
133 134 2.755103 GGATGGTTAAGAGGTGCCAAAG 59.245 50.000 0.00 0.00 34.39 2.77
134 135 1.616159 TGGTTAAGAGGTGCCAAAGC 58.384 50.000 0.00 0.00 40.48 3.51
135 136 0.888619 GGTTAAGAGGTGCCAAAGCC 59.111 55.000 0.00 0.00 38.69 4.35
136 137 1.547901 GGTTAAGAGGTGCCAAAGCCT 60.548 52.381 0.00 0.00 38.69 4.58
137 138 2.239400 GTTAAGAGGTGCCAAAGCCTT 58.761 47.619 0.00 0.00 38.69 4.35
138 139 2.200373 TAAGAGGTGCCAAAGCCTTC 57.800 50.000 0.00 0.00 38.69 3.46
139 140 0.540597 AAGAGGTGCCAAAGCCTTCC 60.541 55.000 0.00 0.00 38.69 3.46
140 141 1.979155 GAGGTGCCAAAGCCTTCCC 60.979 63.158 0.00 0.00 38.69 3.97
141 142 2.203625 GGTGCCAAAGCCTTCCCA 60.204 61.111 0.00 0.00 38.69 4.37
142 143 2.574018 GGTGCCAAAGCCTTCCCAC 61.574 63.158 0.00 0.00 38.69 4.61
143 144 2.203625 TGCCAAAGCCTTCCCACC 60.204 61.111 0.00 0.00 38.69 4.61
144 145 2.997315 GCCAAAGCCTTCCCACCC 60.997 66.667 0.00 0.00 0.00 4.61
145 146 2.676471 CCAAAGCCTTCCCACCCG 60.676 66.667 0.00 0.00 0.00 5.28
146 147 3.373565 CAAAGCCTTCCCACCCGC 61.374 66.667 0.00 0.00 0.00 6.13
147 148 4.678743 AAAGCCTTCCCACCCGCC 62.679 66.667 0.00 0.00 0.00 6.13
157 158 4.796231 CACCCGCCCGAGTTCGAG 62.796 72.222 2.59 0.00 43.02 4.04
164 165 4.421479 CCGAGTTCGAGCGCCAGT 62.421 66.667 2.29 0.00 43.02 4.00
165 166 3.175240 CGAGTTCGAGCGCCAGTG 61.175 66.667 2.29 0.00 43.02 3.66
166 167 3.482783 GAGTTCGAGCGCCAGTGC 61.483 66.667 2.29 0.00 0.00 4.40
175 176 2.816958 CGCCAGTGCTCGCATTCT 60.817 61.111 0.00 0.00 34.43 2.40
176 177 2.806856 CGCCAGTGCTCGCATTCTC 61.807 63.158 0.00 0.00 34.43 2.87
177 178 1.742880 GCCAGTGCTCGCATTCTCA 60.743 57.895 0.00 0.00 33.53 3.27
178 179 1.703438 GCCAGTGCTCGCATTCTCAG 61.703 60.000 0.00 0.00 33.53 3.35
179 180 0.390866 CCAGTGCTCGCATTCTCAGT 60.391 55.000 0.00 0.00 0.00 3.41
180 181 1.436600 CAGTGCTCGCATTCTCAGTT 58.563 50.000 0.00 0.00 0.00 3.16
181 182 1.128136 CAGTGCTCGCATTCTCAGTTG 59.872 52.381 0.00 0.00 0.00 3.16
182 183 1.151668 GTGCTCGCATTCTCAGTTGT 58.848 50.000 0.00 0.00 0.00 3.32
183 184 1.136141 GTGCTCGCATTCTCAGTTGTG 60.136 52.381 0.00 0.00 0.00 3.33
184 185 1.151668 GCTCGCATTCTCAGTTGTGT 58.848 50.000 0.00 0.00 0.00 3.72
185 186 2.288763 TGCTCGCATTCTCAGTTGTGTA 60.289 45.455 0.00 0.00 0.00 2.90
186 187 2.092838 GCTCGCATTCTCAGTTGTGTAC 59.907 50.000 0.00 0.00 0.00 2.90
187 188 3.317150 CTCGCATTCTCAGTTGTGTACA 58.683 45.455 0.00 0.00 0.00 2.90
188 189 3.057019 TCGCATTCTCAGTTGTGTACAC 58.943 45.455 19.36 19.36 0.00 2.90
189 190 2.159973 CGCATTCTCAGTTGTGTACACG 60.160 50.000 20.61 6.89 0.00 4.49
190 191 2.411547 GCATTCTCAGTTGTGTACACGC 60.412 50.000 20.61 15.47 0.00 5.34
191 192 2.588027 TTCTCAGTTGTGTACACGCA 57.412 45.000 20.61 7.53 34.11 5.24
192 193 2.812358 TCTCAGTTGTGTACACGCAT 57.188 45.000 20.61 6.20 36.14 4.73
193 194 3.106242 TCTCAGTTGTGTACACGCATT 57.894 42.857 20.61 4.48 36.14 3.56
194 195 3.462982 TCTCAGTTGTGTACACGCATTT 58.537 40.909 20.61 2.36 36.14 2.32
195 196 3.493129 TCTCAGTTGTGTACACGCATTTC 59.507 43.478 20.61 7.46 36.14 2.17
196 197 3.462982 TCAGTTGTGTACACGCATTTCT 58.537 40.909 20.61 9.39 36.14 2.52
197 198 3.874543 TCAGTTGTGTACACGCATTTCTT 59.125 39.130 20.61 0.00 36.14 2.52
198 199 4.025229 TCAGTTGTGTACACGCATTTCTTC 60.025 41.667 20.61 3.90 36.14 2.87
199 200 4.024893 CAGTTGTGTACACGCATTTCTTCT 60.025 41.667 20.61 5.86 36.14 2.85
200 201 4.574828 AGTTGTGTACACGCATTTCTTCTT 59.425 37.500 20.61 0.00 36.14 2.52
201 202 5.756347 AGTTGTGTACACGCATTTCTTCTTA 59.244 36.000 20.61 0.00 36.14 2.10
202 203 6.259167 AGTTGTGTACACGCATTTCTTCTTAA 59.741 34.615 20.61 2.27 36.14 1.85
203 204 6.795098 TGTGTACACGCATTTCTTCTTAAT 57.205 33.333 20.61 0.00 0.00 1.40
204 205 6.598525 TGTGTACACGCATTTCTTCTTAATG 58.401 36.000 20.61 0.00 36.34 1.90
205 206 6.021596 GTGTACACGCATTTCTTCTTAATGG 58.978 40.000 10.84 0.00 34.36 3.16
206 207 5.935206 TGTACACGCATTTCTTCTTAATGGA 59.065 36.000 0.00 0.00 34.36 3.41
207 208 5.957842 ACACGCATTTCTTCTTAATGGAA 57.042 34.783 0.00 0.00 34.36 3.53
208 209 6.515272 ACACGCATTTCTTCTTAATGGAAT 57.485 33.333 0.00 0.00 34.36 3.01
209 210 6.324819 ACACGCATTTCTTCTTAATGGAATG 58.675 36.000 0.00 0.00 34.36 2.67
210 211 6.071952 ACACGCATTTCTTCTTAATGGAATGT 60.072 34.615 0.00 0.00 34.36 2.71
211 212 6.808212 CACGCATTTCTTCTTAATGGAATGTT 59.192 34.615 0.00 0.00 34.36 2.71
212 213 6.808212 ACGCATTTCTTCTTAATGGAATGTTG 59.192 34.615 0.00 0.00 34.36 3.33
213 214 6.808212 CGCATTTCTTCTTAATGGAATGTTGT 59.192 34.615 0.00 0.00 34.36 3.32
214 215 7.201376 CGCATTTCTTCTTAATGGAATGTTGTG 60.201 37.037 0.00 0.00 34.36 3.33
215 216 7.063780 GCATTTCTTCTTAATGGAATGTTGTGG 59.936 37.037 0.00 0.00 34.36 4.17
216 217 6.588719 TTCTTCTTAATGGAATGTTGTGGG 57.411 37.500 0.00 0.00 0.00 4.61
217 218 5.886609 TCTTCTTAATGGAATGTTGTGGGA 58.113 37.500 0.00 0.00 0.00 4.37
218 219 6.493166 TCTTCTTAATGGAATGTTGTGGGAT 58.507 36.000 0.00 0.00 0.00 3.85
219 220 6.953520 TCTTCTTAATGGAATGTTGTGGGATT 59.046 34.615 0.00 0.00 0.00 3.01
220 221 6.528537 TCTTAATGGAATGTTGTGGGATTG 57.471 37.500 0.00 0.00 0.00 2.67
221 222 6.015918 TCTTAATGGAATGTTGTGGGATTGT 58.984 36.000 0.00 0.00 0.00 2.71
222 223 4.806640 AATGGAATGTTGTGGGATTGTC 57.193 40.909 0.00 0.00 0.00 3.18
223 224 3.524095 TGGAATGTTGTGGGATTGTCT 57.476 42.857 0.00 0.00 0.00 3.41
224 225 4.649267 TGGAATGTTGTGGGATTGTCTA 57.351 40.909 0.00 0.00 0.00 2.59
225 226 4.991776 TGGAATGTTGTGGGATTGTCTAA 58.008 39.130 0.00 0.00 0.00 2.10
226 227 4.764823 TGGAATGTTGTGGGATTGTCTAAC 59.235 41.667 0.00 0.00 0.00 2.34
227 228 4.157840 GGAATGTTGTGGGATTGTCTAACC 59.842 45.833 0.00 0.00 0.00 2.85
228 229 3.149005 TGTTGTGGGATTGTCTAACCC 57.851 47.619 0.00 0.00 43.51 4.11
234 235 2.835027 GGGATTGTCTAACCCACGATC 58.165 52.381 0.00 0.00 42.81 3.69
235 236 2.169769 GGGATTGTCTAACCCACGATCA 59.830 50.000 0.00 0.00 42.81 2.92
236 237 3.370103 GGGATTGTCTAACCCACGATCAA 60.370 47.826 0.00 0.00 42.81 2.57
237 238 3.871594 GGATTGTCTAACCCACGATCAAG 59.128 47.826 0.00 0.00 36.65 3.02
238 239 4.382685 GGATTGTCTAACCCACGATCAAGA 60.383 45.833 0.00 0.00 36.65 3.02
239 240 3.587797 TGTCTAACCCACGATCAAGAC 57.412 47.619 0.00 0.00 35.13 3.01
240 241 2.094906 TGTCTAACCCACGATCAAGACG 60.095 50.000 0.00 0.00 36.90 4.18
241 242 1.135199 TCTAACCCACGATCAAGACGC 60.135 52.381 0.00 0.00 0.00 5.19
242 243 0.108520 TAACCCACGATCAAGACGCC 60.109 55.000 0.00 0.00 0.00 5.68
243 244 2.885644 CCCACGATCAAGACGCCG 60.886 66.667 0.00 0.00 0.00 6.46
244 245 3.554692 CCACGATCAAGACGCCGC 61.555 66.667 0.00 0.00 0.00 6.53
245 246 2.809174 CACGATCAAGACGCCGCA 60.809 61.111 0.00 0.00 0.00 5.69
246 247 2.809601 ACGATCAAGACGCCGCAC 60.810 61.111 0.00 0.00 0.00 5.34
247 248 3.554692 CGATCAAGACGCCGCACC 61.555 66.667 0.00 0.00 0.00 5.01
248 249 3.554692 GATCAAGACGCCGCACCG 61.555 66.667 0.00 0.00 0.00 4.94
249 250 3.982372 GATCAAGACGCCGCACCGA 62.982 63.158 0.00 0.00 0.00 4.69
250 251 3.583276 ATCAAGACGCCGCACCGAA 62.583 57.895 0.00 0.00 0.00 4.30
251 252 3.342627 CAAGACGCCGCACCGAAA 61.343 61.111 0.00 0.00 0.00 3.46
252 253 2.589442 AAGACGCCGCACCGAAAA 60.589 55.556 0.00 0.00 0.00 2.29
253 254 2.888998 AAGACGCCGCACCGAAAAC 61.889 57.895 0.00 0.00 0.00 2.43
254 255 4.379143 GACGCCGCACCGAAAACC 62.379 66.667 0.00 0.00 0.00 3.27
256 257 3.955101 CGCCGCACCGAAAACCAA 61.955 61.111 0.00 0.00 0.00 3.67
257 258 2.648454 GCCGCACCGAAAACCAAT 59.352 55.556 0.00 0.00 0.00 3.16
258 259 1.877367 GCCGCACCGAAAACCAATA 59.123 52.632 0.00 0.00 0.00 1.90
259 260 0.179174 GCCGCACCGAAAACCAATAG 60.179 55.000 0.00 0.00 0.00 1.73
260 261 1.444836 CCGCACCGAAAACCAATAGA 58.555 50.000 0.00 0.00 0.00 1.98
261 262 1.807742 CCGCACCGAAAACCAATAGAA 59.192 47.619 0.00 0.00 0.00 2.10
262 263 2.226912 CCGCACCGAAAACCAATAGAAA 59.773 45.455 0.00 0.00 0.00 2.52
263 264 3.231160 CGCACCGAAAACCAATAGAAAC 58.769 45.455 0.00 0.00 0.00 2.78
264 265 3.571571 GCACCGAAAACCAATAGAAACC 58.428 45.455 0.00 0.00 0.00 3.27
265 266 3.004944 GCACCGAAAACCAATAGAAACCA 59.995 43.478 0.00 0.00 0.00 3.67
266 267 4.500035 GCACCGAAAACCAATAGAAACCAA 60.500 41.667 0.00 0.00 0.00 3.67
267 268 4.979815 CACCGAAAACCAATAGAAACCAAC 59.020 41.667 0.00 0.00 0.00 3.77
268 269 4.223659 CCGAAAACCAATAGAAACCAACG 58.776 43.478 0.00 0.00 0.00 4.10
269 270 3.666797 CGAAAACCAATAGAAACCAACGC 59.333 43.478 0.00 0.00 0.00 4.84
270 271 4.555906 CGAAAACCAATAGAAACCAACGCT 60.556 41.667 0.00 0.00 0.00 5.07
271 272 4.929819 AAACCAATAGAAACCAACGCTT 57.070 36.364 0.00 0.00 0.00 4.68
272 273 4.499037 AACCAATAGAAACCAACGCTTC 57.501 40.909 0.00 0.00 0.00 3.86
273 274 3.751518 ACCAATAGAAACCAACGCTTCT 58.248 40.909 0.00 0.00 35.99 2.85
274 275 3.502211 ACCAATAGAAACCAACGCTTCTG 59.498 43.478 0.00 0.00 33.89 3.02
275 276 3.492313 CAATAGAAACCAACGCTTCTGC 58.508 45.455 0.00 0.00 33.89 4.26
276 277 2.543777 TAGAAACCAACGCTTCTGCT 57.456 45.000 0.00 0.00 33.89 4.24
277 278 1.230324 AGAAACCAACGCTTCTGCTC 58.770 50.000 0.00 0.00 36.97 4.26
278 279 0.238553 GAAACCAACGCTTCTGCTCC 59.761 55.000 0.00 0.00 36.97 4.70
279 280 0.179018 AAACCAACGCTTCTGCTCCT 60.179 50.000 0.00 0.00 36.97 3.69
280 281 0.603975 AACCAACGCTTCTGCTCCTC 60.604 55.000 0.00 0.00 36.97 3.71
281 282 2.097038 CCAACGCTTCTGCTCCTCG 61.097 63.158 0.00 0.00 36.97 4.63
282 283 2.433318 AACGCTTCTGCTCCTCGC 60.433 61.111 0.00 0.00 36.97 5.03
291 292 3.112709 GCTCCTCGCAACGTCCAC 61.113 66.667 0.00 0.00 38.92 4.02
292 293 2.338620 CTCCTCGCAACGTCCACA 59.661 61.111 0.00 0.00 0.00 4.17
293 294 2.022129 CTCCTCGCAACGTCCACAC 61.022 63.158 0.00 0.00 0.00 3.82
294 295 2.029073 CCTCGCAACGTCCACACT 59.971 61.111 0.00 0.00 0.00 3.55
295 296 2.022129 CCTCGCAACGTCCACACTC 61.022 63.158 0.00 0.00 0.00 3.51
296 297 1.299850 CTCGCAACGTCCACACTCA 60.300 57.895 0.00 0.00 0.00 3.41
297 298 0.667487 CTCGCAACGTCCACACTCAT 60.667 55.000 0.00 0.00 0.00 2.90
298 299 0.943835 TCGCAACGTCCACACTCATG 60.944 55.000 0.00 0.00 0.00 3.07
299 300 1.207593 GCAACGTCCACACTCATGC 59.792 57.895 0.00 0.00 0.00 4.06
300 301 1.230635 GCAACGTCCACACTCATGCT 61.231 55.000 0.00 0.00 0.00 3.79
301 302 1.229428 CAACGTCCACACTCATGCTT 58.771 50.000 0.00 0.00 0.00 3.91
302 303 1.069703 CAACGTCCACACTCATGCTTG 60.070 52.381 0.00 0.00 0.00 4.01
303 304 0.106708 ACGTCCACACTCATGCTTGT 59.893 50.000 0.00 0.00 0.00 3.16
304 305 1.343142 ACGTCCACACTCATGCTTGTA 59.657 47.619 0.00 0.00 0.00 2.41
305 306 1.995484 CGTCCACACTCATGCTTGTAG 59.005 52.381 0.00 0.00 0.00 2.74
306 307 2.610479 CGTCCACACTCATGCTTGTAGT 60.610 50.000 0.00 0.01 0.00 2.73
307 308 2.738846 GTCCACACTCATGCTTGTAGTG 59.261 50.000 20.44 20.44 44.89 2.74
308 309 2.632512 TCCACACTCATGCTTGTAGTGA 59.367 45.455 25.01 10.79 42.59 3.41
309 310 2.998670 CCACACTCATGCTTGTAGTGAG 59.001 50.000 25.01 20.13 42.59 3.51
310 311 2.998670 CACACTCATGCTTGTAGTGAGG 59.001 50.000 25.01 17.37 42.59 3.86
311 312 2.005451 CACTCATGCTTGTAGTGAGGC 58.995 52.381 18.75 0.00 42.59 4.70
312 313 1.905215 ACTCATGCTTGTAGTGAGGCT 59.095 47.619 6.56 0.00 42.75 4.58
313 314 2.093764 ACTCATGCTTGTAGTGAGGCTC 60.094 50.000 7.79 7.79 42.75 4.70
314 315 1.208052 TCATGCTTGTAGTGAGGCTCC 59.792 52.381 12.86 3.35 0.00 4.70
315 316 1.209019 CATGCTTGTAGTGAGGCTCCT 59.791 52.381 12.86 11.08 0.00 3.69
316 317 0.898320 TGCTTGTAGTGAGGCTCCTC 59.102 55.000 12.86 8.95 43.01 3.71
317 318 0.179124 GCTTGTAGTGAGGCTCCTCG 60.179 60.000 12.86 0.84 45.48 4.63
323 324 2.601666 TGAGGCTCCTCGCACAGT 60.602 61.111 12.86 0.00 45.48 3.55
324 325 2.183046 GAGGCTCCTCGCACAGTC 59.817 66.667 2.15 0.00 41.67 3.51
325 326 2.601666 AGGCTCCTCGCACAGTCA 60.602 61.111 0.00 0.00 41.67 3.41
326 327 2.433318 GGCTCCTCGCACAGTCAC 60.433 66.667 0.00 0.00 41.67 3.67
327 328 2.340078 GCTCCTCGCACAGTCACA 59.660 61.111 0.00 0.00 38.92 3.58
328 329 2.024319 GCTCCTCGCACAGTCACAC 61.024 63.158 0.00 0.00 38.92 3.82
329 330 1.662608 CTCCTCGCACAGTCACACT 59.337 57.895 0.00 0.00 0.00 3.55
330 331 0.387878 CTCCTCGCACAGTCACACTC 60.388 60.000 0.00 0.00 0.00 3.51
331 332 1.730902 CCTCGCACAGTCACACTCG 60.731 63.158 0.00 0.00 0.00 4.18
332 333 2.354656 TCGCACAGTCACACTCGC 60.355 61.111 0.00 0.00 0.00 5.03
333 334 3.756677 CGCACAGTCACACTCGCG 61.757 66.667 0.00 0.00 39.66 5.87
334 335 2.354656 GCACAGTCACACTCGCGA 60.355 61.111 9.26 9.26 0.00 5.87
335 336 1.734477 GCACAGTCACACTCGCGAT 60.734 57.895 10.36 0.00 0.00 4.58
336 337 1.949015 GCACAGTCACACTCGCGATG 61.949 60.000 10.36 12.96 0.00 3.84
337 338 1.734477 ACAGTCACACTCGCGATGC 60.734 57.895 10.36 1.89 0.00 3.91
338 339 1.445066 CAGTCACACTCGCGATGCT 60.445 57.895 10.36 4.34 0.00 3.79
339 340 1.445066 AGTCACACTCGCGATGCTG 60.445 57.895 10.36 8.19 0.00 4.41
340 341 2.810887 TCACACTCGCGATGCTGC 60.811 61.111 10.36 0.00 0.00 5.25
341 342 2.812609 CACACTCGCGATGCTGCT 60.813 61.111 10.36 0.00 0.00 4.24
342 343 2.507992 ACACTCGCGATGCTGCTC 60.508 61.111 10.36 0.00 0.00 4.26
343 344 3.614659 CACTCGCGATGCTGCTCG 61.615 66.667 10.36 14.31 41.54 5.03
349 350 4.309347 CGATGCTGCTCGCCATGC 62.309 66.667 0.00 0.00 38.05 4.06
361 362 2.438975 CCATGCGCCACCTCACAT 60.439 61.111 4.18 0.00 0.00 3.21
362 363 2.048023 CCATGCGCCACCTCACATT 61.048 57.895 4.18 0.00 0.00 2.71
363 364 1.597797 CCATGCGCCACCTCACATTT 61.598 55.000 4.18 0.00 0.00 2.32
364 365 1.093972 CATGCGCCACCTCACATTTA 58.906 50.000 4.18 0.00 0.00 1.40
365 366 1.094785 ATGCGCCACCTCACATTTAC 58.905 50.000 4.18 0.00 0.00 2.01
366 367 0.958382 TGCGCCACCTCACATTTACC 60.958 55.000 4.18 0.00 0.00 2.85
367 368 1.977594 GCGCCACCTCACATTTACCG 61.978 60.000 0.00 0.00 0.00 4.02
368 369 1.800681 GCCACCTCACATTTACCGC 59.199 57.895 0.00 0.00 0.00 5.68
369 370 0.676782 GCCACCTCACATTTACCGCT 60.677 55.000 0.00 0.00 0.00 5.52
370 371 1.369625 CCACCTCACATTTACCGCTC 58.630 55.000 0.00 0.00 0.00 5.03
371 372 1.066143 CCACCTCACATTTACCGCTCT 60.066 52.381 0.00 0.00 0.00 4.09
372 373 2.615493 CCACCTCACATTTACCGCTCTT 60.615 50.000 0.00 0.00 0.00 2.85
373 374 3.074412 CACCTCACATTTACCGCTCTTT 58.926 45.455 0.00 0.00 0.00 2.52
374 375 3.502211 CACCTCACATTTACCGCTCTTTT 59.498 43.478 0.00 0.00 0.00 2.27
375 376 3.502211 ACCTCACATTTACCGCTCTTTTG 59.498 43.478 0.00 0.00 0.00 2.44
376 377 3.502211 CCTCACATTTACCGCTCTTTTGT 59.498 43.478 0.00 0.00 0.00 2.83
377 378 4.023193 CCTCACATTTACCGCTCTTTTGTT 60.023 41.667 0.00 0.00 0.00 2.83
378 379 4.854399 TCACATTTACCGCTCTTTTGTTG 58.146 39.130 0.00 0.00 0.00 3.33
379 380 4.336993 TCACATTTACCGCTCTTTTGTTGT 59.663 37.500 0.00 0.00 0.00 3.32
380 381 4.675114 CACATTTACCGCTCTTTTGTTGTC 59.325 41.667 0.00 0.00 0.00 3.18
381 382 3.595709 TTTACCGCTCTTTTGTTGTCG 57.404 42.857 0.00 0.00 0.00 4.35
382 383 1.504359 TACCGCTCTTTTGTTGTCGG 58.496 50.000 0.00 0.00 42.24 4.79
383 384 0.463116 ACCGCTCTTTTGTTGTCGGT 60.463 50.000 0.00 0.00 44.32 4.69
384 385 0.661020 CCGCTCTTTTGTTGTCGGTT 59.339 50.000 0.00 0.00 32.93 4.44
385 386 1.064952 CCGCTCTTTTGTTGTCGGTTT 59.935 47.619 0.00 0.00 32.93 3.27
386 387 2.478879 CCGCTCTTTTGTTGTCGGTTTT 60.479 45.455 0.00 0.00 32.93 2.43
387 388 3.175929 CGCTCTTTTGTTGTCGGTTTTT 58.824 40.909 0.00 0.00 0.00 1.94
388 389 3.001168 CGCTCTTTTGTTGTCGGTTTTTG 60.001 43.478 0.00 0.00 0.00 2.44
389 390 3.241963 GCTCTTTTGTTGTCGGTTTTTGC 60.242 43.478 0.00 0.00 0.00 3.68
390 391 4.173256 CTCTTTTGTTGTCGGTTTTTGCT 58.827 39.130 0.00 0.00 0.00 3.91
391 392 4.170256 TCTTTTGTTGTCGGTTTTTGCTC 58.830 39.130 0.00 0.00 0.00 4.26
392 393 2.181426 TTGTTGTCGGTTTTTGCTCG 57.819 45.000 0.00 0.00 0.00 5.03
393 394 1.088306 TGTTGTCGGTTTTTGCTCGT 58.912 45.000 0.00 0.00 0.00 4.18
394 395 2.277969 TGTTGTCGGTTTTTGCTCGTA 58.722 42.857 0.00 0.00 0.00 3.43
395 396 2.030701 TGTTGTCGGTTTTTGCTCGTAC 59.969 45.455 0.00 0.00 0.00 3.67
396 397 1.219646 TGTCGGTTTTTGCTCGTACC 58.780 50.000 0.00 0.00 0.00 3.34
399 400 1.208358 GGTTTTTGCTCGTACCGGC 59.792 57.895 0.00 0.00 0.00 6.13
400 401 1.508808 GGTTTTTGCTCGTACCGGCA 61.509 55.000 0.00 3.67 36.62 5.69
401 402 0.308376 GTTTTTGCTCGTACCGGCAA 59.692 50.000 13.77 13.77 45.06 4.52
402 403 1.068816 GTTTTTGCTCGTACCGGCAAT 60.069 47.619 17.08 0.00 45.82 3.56
403 404 0.519519 TTTTGCTCGTACCGGCAATG 59.480 50.000 17.08 0.00 45.82 2.82
404 405 0.604243 TTTGCTCGTACCGGCAATGT 60.604 50.000 17.08 0.00 45.82 2.71
405 406 0.604243 TTGCTCGTACCGGCAATGTT 60.604 50.000 13.77 0.00 42.45 2.71
406 407 1.017177 TGCTCGTACCGGCAATGTTC 61.017 55.000 0.00 0.00 35.40 3.18
407 408 1.995991 CTCGTACCGGCAATGTTCG 59.004 57.895 0.00 0.00 0.00 3.95
408 409 0.734942 CTCGTACCGGCAATGTTCGT 60.735 55.000 0.00 0.00 0.00 3.85
409 410 0.525311 TCGTACCGGCAATGTTCGTA 59.475 50.000 0.00 0.00 0.00 3.43
410 411 1.067985 TCGTACCGGCAATGTTCGTAA 60.068 47.619 0.00 0.00 0.00 3.18
411 412 1.059549 CGTACCGGCAATGTTCGTAAC 59.940 52.381 0.00 0.00 0.00 2.50
412 413 2.067766 GTACCGGCAATGTTCGTAACA 58.932 47.619 0.00 3.49 46.94 2.41
413 414 1.595466 ACCGGCAATGTTCGTAACAA 58.405 45.000 0.00 0.00 45.86 2.83
414 415 2.156098 ACCGGCAATGTTCGTAACAAT 58.844 42.857 0.00 0.00 45.86 2.71
415 416 2.554893 ACCGGCAATGTTCGTAACAATT 59.445 40.909 0.00 0.00 45.86 2.32
416 417 3.004944 ACCGGCAATGTTCGTAACAATTT 59.995 39.130 0.00 0.00 45.86 1.82
417 418 3.363426 CCGGCAATGTTCGTAACAATTTG 59.637 43.478 0.00 0.00 45.86 2.32
418 419 3.978217 CGGCAATGTTCGTAACAATTTGT 59.022 39.130 0.00 0.00 45.86 2.83
419 420 4.442733 CGGCAATGTTCGTAACAATTTGTT 59.557 37.500 18.13 18.13 45.86 2.83
420 421 5.051374 CGGCAATGTTCGTAACAATTTGTTT 60.051 36.000 19.15 5.05 45.86 2.83
421 422 6.126079 GGCAATGTTCGTAACAATTTGTTTG 58.874 36.000 19.15 12.57 45.86 2.93
422 423 6.019479 GGCAATGTTCGTAACAATTTGTTTGA 60.019 34.615 19.15 14.43 45.86 2.69
423 424 6.838806 GCAATGTTCGTAACAATTTGTTTGAC 59.161 34.615 19.15 11.62 45.86 3.18
424 425 7.463383 GCAATGTTCGTAACAATTTGTTTGACA 60.463 33.333 19.15 16.87 45.86 3.58
425 426 6.856494 TGTTCGTAACAATTTGTTTGACAC 57.144 33.333 19.15 10.65 41.45 3.67
426 427 5.800941 TGTTCGTAACAATTTGTTTGACACC 59.199 36.000 19.15 9.25 41.45 4.16
427 428 4.922719 TCGTAACAATTTGTTTGACACCC 58.077 39.130 19.15 0.64 41.45 4.61
428 429 4.398358 TCGTAACAATTTGTTTGACACCCA 59.602 37.500 19.15 0.00 41.45 4.51
429 430 5.103000 CGTAACAATTTGTTTGACACCCAA 58.897 37.500 19.15 0.00 41.45 4.12
430 431 5.751028 CGTAACAATTTGTTTGACACCCAAT 59.249 36.000 19.15 0.00 41.45 3.16
431 432 6.074569 CGTAACAATTTGTTTGACACCCAATC 60.075 38.462 19.15 0.00 41.45 2.67
432 433 5.350504 ACAATTTGTTTGACACCCAATCA 57.649 34.783 0.00 0.00 38.76 2.57
433 434 5.738909 ACAATTTGTTTGACACCCAATCAA 58.261 33.333 0.00 0.00 40.64 2.57
434 435 5.584251 ACAATTTGTTTGACACCCAATCAAC 59.416 36.000 0.00 0.00 41.52 3.18
435 436 3.810310 TTGTTTGACACCCAATCAACC 57.190 42.857 0.00 0.00 38.70 3.77
436 437 2.739943 TGTTTGACACCCAATCAACCA 58.260 42.857 0.00 0.00 35.82 3.67
437 438 3.303938 TGTTTGACACCCAATCAACCAT 58.696 40.909 0.00 0.00 35.82 3.55
438 439 3.320541 TGTTTGACACCCAATCAACCATC 59.679 43.478 0.00 0.00 35.82 3.51
458 459 1.202463 CGAGAGATCCGGTGCTTGAAT 60.202 52.381 0.00 0.00 0.00 2.57
464 465 5.041191 AGATCCGGTGCTTGAATTAGAAT 57.959 39.130 0.00 0.00 0.00 2.40
466 467 4.963276 TCCGGTGCTTGAATTAGAATTG 57.037 40.909 0.00 0.00 0.00 2.32
507 508 9.661563 TTTTTATCAACACTAGATAATCACCGT 57.338 29.630 0.00 0.00 37.68 4.83
508 509 8.642908 TTTATCAACACTAGATAATCACCGTG 57.357 34.615 0.00 0.00 37.68 4.94
509 510 5.654603 TCAACACTAGATAATCACCGTGT 57.345 39.130 0.00 0.00 37.21 4.49
516 518 3.407698 AGATAATCACCGTGTGTTGCAA 58.592 40.909 0.00 0.00 34.79 4.08
563 565 8.060931 TGTTAATTTATGATTACCTGCTTGCA 57.939 30.769 0.00 0.00 0.00 4.08
564 566 8.694540 TGTTAATTTATGATTACCTGCTTGCAT 58.305 29.630 0.00 0.00 0.00 3.96
565 567 9.533253 GTTAATTTATGATTACCTGCTTGCATT 57.467 29.630 0.00 0.00 0.00 3.56
572 574 7.822161 TGATTACCTGCTTGCATTAATATGT 57.178 32.000 0.00 0.00 34.12 2.29
580 582 9.793252 CCTGCTTGCATTAATATGTATTTATCC 57.207 33.333 0.00 0.00 34.12 2.59
607 609 9.442047 AAAACTTGGTTTGATTTGATAAACACA 57.558 25.926 0.00 0.00 38.26 3.72
608 610 8.419076 AACTTGGTTTGATTTGATAAACACAC 57.581 30.769 0.00 0.00 38.26 3.82
609 611 6.983890 ACTTGGTTTGATTTGATAAACACACC 59.016 34.615 0.00 0.00 38.26 4.16
611 613 7.118496 TGGTTTGATTTGATAAACACACCTT 57.882 32.000 0.00 0.00 38.26 3.50
612 614 7.560368 TGGTTTGATTTGATAAACACACCTTT 58.440 30.769 0.00 0.00 38.26 3.11
613 615 7.493971 TGGTTTGATTTGATAAACACACCTTTG 59.506 33.333 0.00 0.00 38.26 2.77
614 616 7.042119 GGTTTGATTTGATAAACACACCTTTGG 60.042 37.037 0.00 0.00 38.26 3.28
615 617 5.537188 TGATTTGATAAACACACCTTTGGC 58.463 37.500 0.00 0.00 0.00 4.52
618 624 5.606348 TTGATAAACACACCTTTGGCTTT 57.394 34.783 0.00 0.00 0.00 3.51
674 680 1.173913 GGCAGTTGAGCCGGTTAAAT 58.826 50.000 1.90 0.00 46.12 1.40
747 3673 1.246056 TGCTCGTAGTAACCCGCTGT 61.246 55.000 0.00 0.00 0.00 4.40
749 3675 1.670967 GCTCGTAGTAACCCGCTGTTT 60.671 52.381 0.00 0.00 38.42 2.83
750 3676 2.680577 CTCGTAGTAACCCGCTGTTTT 58.319 47.619 0.00 0.00 38.42 2.43
751 3677 3.062042 CTCGTAGTAACCCGCTGTTTTT 58.938 45.455 0.00 0.00 38.42 1.94
781 3709 3.427503 GCACGTGGGACAATTAAAGGATG 60.428 47.826 18.88 0.00 44.16 3.51
787 3715 2.039418 GACAATTAAAGGATGGGGGCC 58.961 52.381 0.00 0.00 0.00 5.80
788 3716 1.651235 ACAATTAAAGGATGGGGGCCT 59.349 47.619 0.84 0.00 37.35 5.19
826 3784 2.738521 CTCGTTGCTCCACCACCG 60.739 66.667 0.00 0.00 0.00 4.94
864 3825 1.830408 CCGGCCCTCTAGGAGACAG 60.830 68.421 0.00 0.00 38.24 3.51
888 3849 2.362077 GTGCCATTTCAGAACCAGTGTT 59.638 45.455 0.00 0.00 37.42 3.32
912 3873 0.831966 CTGCTGAAGCCCATCTCTCT 59.168 55.000 0.00 0.00 41.18 3.10
916 3877 1.688197 CTGAAGCCCATCTCTCTCTCC 59.312 57.143 0.00 0.00 0.00 3.71
918 3879 0.341258 AAGCCCATCTCTCTCTCCCA 59.659 55.000 0.00 0.00 0.00 4.37
919 3880 0.567182 AGCCCATCTCTCTCTCCCAT 59.433 55.000 0.00 0.00 0.00 4.00
921 3882 1.482930 GCCCATCTCTCTCTCCCATCT 60.483 57.143 0.00 0.00 0.00 2.90
924 3885 3.424703 CCATCTCTCTCTCCCATCTCTC 58.575 54.545 0.00 0.00 0.00 3.20
926 3887 1.202758 TCTCTCTCTCCCATCTCTCGC 60.203 57.143 0.00 0.00 0.00 5.03
928 3889 1.202758 TCTCTCTCCCATCTCTCGCTC 60.203 57.143 0.00 0.00 0.00 5.03
929 3890 0.843309 TCTCTCCCATCTCTCGCTCT 59.157 55.000 0.00 0.00 0.00 4.09
930 3891 2.038426 CTCTCTCCCATCTCTCGCTCTA 59.962 54.545 0.00 0.00 0.00 2.43
931 3892 2.038426 TCTCTCCCATCTCTCGCTCTAG 59.962 54.545 0.00 0.00 0.00 2.43
932 3893 0.881118 CTCCCATCTCTCGCTCTAGC 59.119 60.000 0.00 0.00 37.78 3.42
933 3894 0.183731 TCCCATCTCTCGCTCTAGCA 59.816 55.000 2.44 0.00 42.21 3.49
934 3895 0.313672 CCCATCTCTCGCTCTAGCAC 59.686 60.000 2.44 0.00 42.21 4.40
935 3896 0.313672 CCATCTCTCGCTCTAGCACC 59.686 60.000 2.44 0.00 42.21 5.01
936 3897 0.313672 CATCTCTCGCTCTAGCACCC 59.686 60.000 2.44 0.00 42.21 4.61
937 3898 0.184933 ATCTCTCGCTCTAGCACCCT 59.815 55.000 2.44 0.00 42.21 4.34
938 3899 0.033991 TCTCTCGCTCTAGCACCCTT 60.034 55.000 2.44 0.00 42.21 3.95
962 3923 1.480545 ACAAAACCACAAGAGGCCAAC 59.519 47.619 5.01 0.00 0.00 3.77
964 3925 0.032615 AAACCACAAGAGGCCAACCA 60.033 50.000 5.01 0.00 39.06 3.67
1272 4291 4.806339 CCCCGCCTCTTCCTCCCT 62.806 72.222 0.00 0.00 0.00 4.20
1404 4423 1.074248 GTACAACCCCCACCACCAG 59.926 63.158 0.00 0.00 0.00 4.00
1710 4729 3.957586 CACCACAGGAGGCAGCCA 61.958 66.667 15.80 0.00 0.00 4.75
1711 4730 3.644606 ACCACAGGAGGCAGCCAG 61.645 66.667 15.80 2.73 0.00 4.85
1732 4760 0.459489 GTCCCAACAGCAGCAACAAA 59.541 50.000 0.00 0.00 0.00 2.83
1767 4817 1.384502 TAGCCATGGGAGGGGACAG 60.385 63.158 15.13 0.00 0.00 3.51
1821 4871 1.690219 CCGACAGGGGAAGAGGGATG 61.690 65.000 0.00 0.00 0.00 3.51
1834 4884 5.340027 GGAAGAGGGATGAATTAAACAGGGA 60.340 44.000 0.00 0.00 0.00 4.20
1890 4941 7.894708 TCTGATCTTCATCATGTCTCCTAATC 58.105 38.462 0.00 0.00 38.42 1.75
1898 4949 7.957002 TCATCATGTCTCCTAATCTTACTTCC 58.043 38.462 0.00 0.00 0.00 3.46
1966 5017 6.707440 TTCCTTTTGTTTCTAGTTGATGCA 57.293 33.333 0.00 0.00 0.00 3.96
1984 5035 5.300034 TGATGCATCAGTTAATTGGGATGAC 59.700 40.000 25.42 0.00 39.52 3.06
1985 5036 3.627123 TGCATCAGTTAATTGGGATGACG 59.373 43.478 11.99 0.00 39.52 4.35
1986 5037 3.876914 GCATCAGTTAATTGGGATGACGA 59.123 43.478 11.99 0.00 39.52 4.20
1987 5038 4.516698 GCATCAGTTAATTGGGATGACGAT 59.483 41.667 11.99 0.00 39.52 3.73
1988 5039 5.009010 GCATCAGTTAATTGGGATGACGATT 59.991 40.000 11.99 0.00 39.52 3.34
1989 5040 6.432936 CATCAGTTAATTGGGATGACGATTG 58.567 40.000 0.00 0.00 39.52 2.67
1990 5041 4.335315 TCAGTTAATTGGGATGACGATTGC 59.665 41.667 0.00 0.00 0.00 3.56
1991 5042 4.336433 CAGTTAATTGGGATGACGATTGCT 59.664 41.667 0.00 0.00 0.00 3.91
1992 5043 4.576463 AGTTAATTGGGATGACGATTGCTC 59.424 41.667 0.00 0.00 0.00 4.26
2010 5061 3.580022 TGCTCGATGATGATAATGAGGGT 59.420 43.478 0.00 0.00 0.00 4.34
2030 5081 6.523840 AGGGTACTCAGAGTCTATACTTACG 58.476 44.000 6.27 0.00 35.56 3.18
2034 5085 8.672815 GGTACTCAGAGTCTATACTTACGTTTT 58.327 37.037 6.27 0.00 35.56 2.43
2073 5139 6.328714 TCGAAATCTCTCACAAGAAGATCAG 58.671 40.000 0.00 0.00 0.00 2.90
2077 5143 4.564041 TCTCTCACAAGAAGATCAGTTGC 58.436 43.478 0.00 0.00 0.00 4.17
2143 5209 3.969899 TCATCTTCACTTGATCGATCGG 58.030 45.455 20.03 16.72 0.00 4.18
2144 5210 3.381590 TCATCTTCACTTGATCGATCGGT 59.618 43.478 20.03 17.32 0.00 4.69
2145 5211 3.150848 TCTTCACTTGATCGATCGGTG 57.849 47.619 29.41 29.41 35.76 4.94
2146 5212 2.492088 TCTTCACTTGATCGATCGGTGT 59.508 45.455 31.48 22.54 35.84 4.16
2147 5213 3.056821 TCTTCACTTGATCGATCGGTGTT 60.057 43.478 31.48 12.59 35.84 3.32
2148 5214 3.313012 TCACTTGATCGATCGGTGTTT 57.687 42.857 31.48 11.50 35.84 2.83
2149 5215 2.993220 TCACTTGATCGATCGGTGTTTG 59.007 45.455 31.48 19.40 35.84 2.93
2159 5225 2.417097 GGTGTTTGGTGGTGCTGC 59.583 61.111 0.00 0.00 0.00 5.25
2183 5249 7.119116 TGCTATTTCTCGCTGTTCTTTCAAATA 59.881 33.333 0.00 0.00 0.00 1.40
2202 5268 8.667076 TCAAATACAGAATCATCGATCATGTT 57.333 30.769 0.00 0.00 33.66 2.71
2241 5308 5.527582 ACCAGCACCGAATTATTTATCAGAC 59.472 40.000 0.00 0.00 0.00 3.51
2319 5393 1.670811 CAACTGGTACGGGCATGAATC 59.329 52.381 0.00 0.00 40.47 2.52
2329 5404 3.064820 ACGGGCATGAATCGATTTAACAC 59.935 43.478 12.81 5.38 0.00 3.32
2336 5411 1.663695 ATCGATTTAACACCGGCCAG 58.336 50.000 0.00 0.00 0.00 4.85
2374 5462 6.032094 GGAACATATGCTTGAATGTGACTTG 58.968 40.000 1.58 0.00 36.47 3.16
2395 5483 6.151144 ACTTGATTATCAGCACCAACTAAACC 59.849 38.462 0.00 0.00 0.00 3.27
2397 5485 5.647658 TGATTATCAGCACCAACTAAACCTG 59.352 40.000 0.00 0.00 0.00 4.00
2426 5514 2.744202 CAAGAACACATGCAGGAGTACC 59.256 50.000 4.84 0.00 0.00 3.34
2479 5577 1.001924 CGGTTGCTGTGCATTGTTGTA 60.002 47.619 0.00 0.00 38.76 2.41
2480 5578 2.393764 GGTTGCTGTGCATTGTTGTAC 58.606 47.619 0.00 0.00 38.76 2.90
2481 5579 2.043411 GTTGCTGTGCATTGTTGTACG 58.957 47.619 0.00 0.00 40.93 3.67
2482 5580 1.304254 TGCTGTGCATTGTTGTACGT 58.696 45.000 0.00 0.00 40.93 3.57
2487 5585 4.142902 GCTGTGCATTGTTGTACGTAAGAT 60.143 41.667 0.00 0.00 40.93 2.40
2494 5592 5.752892 TTGTTGTACGTAAGATTTTGCCA 57.247 34.783 0.00 0.00 43.62 4.92
2531 5636 8.866970 AAAAATACAGATTACTACCGGGAAAA 57.133 30.769 6.32 0.00 0.00 2.29
2532 5637 8.866970 AAAATACAGATTACTACCGGGAAAAA 57.133 30.769 6.32 0.00 0.00 1.94
2599 5846 0.320771 GCCGGTCAGTCACTCACATT 60.321 55.000 1.90 0.00 0.00 2.71
2621 5868 2.945668 GCCTATGTTTGCCGAAGAAGAT 59.054 45.455 0.00 0.00 0.00 2.40
2625 5872 4.627611 ATGTTTGCCGAAGAAGATGATG 57.372 40.909 0.00 0.00 0.00 3.07
2699 5947 0.918983 CTAACTGCAAGGGATGGGGA 59.081 55.000 0.00 0.00 39.30 4.81
2700 5948 1.496429 CTAACTGCAAGGGATGGGGAT 59.504 52.381 0.00 0.00 39.30 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.281371 TGTATTTACGATCTATAGTACACAGCT 57.719 33.333 0.00 0.00 0.00 4.24
3 4 9.888878 TTGTATTTACGATCTATAGTACACAGC 57.111 33.333 0.00 0.00 0.00 4.40
15 16 9.840427 CCAAAACAGAATTTGTATTTACGATCT 57.160 29.630 0.00 0.00 39.73 2.75
16 17 9.620660 ACCAAAACAGAATTTGTATTTACGATC 57.379 29.630 0.00 0.00 39.73 3.69
17 18 9.620660 GACCAAAACAGAATTTGTATTTACGAT 57.379 29.630 0.00 0.00 39.73 3.73
18 19 8.622157 TGACCAAAACAGAATTTGTATTTACGA 58.378 29.630 0.00 0.00 39.73 3.43
19 20 8.789881 TGACCAAAACAGAATTTGTATTTACG 57.210 30.769 0.00 0.00 39.73 3.18
22 23 9.883142 TCTTTGACCAAAACAGAATTTGTATTT 57.117 25.926 0.00 0.00 39.73 1.40
25 26 9.528018 GAATCTTTGACCAAAACAGAATTTGTA 57.472 29.630 0.00 0.00 39.73 2.41
26 27 8.040132 TGAATCTTTGACCAAAACAGAATTTGT 58.960 29.630 0.00 0.00 43.45 2.83
27 28 8.422973 TGAATCTTTGACCAAAACAGAATTTG 57.577 30.769 0.00 0.00 39.47 2.32
30 31 9.865321 CATATGAATCTTTGACCAAAACAGAAT 57.135 29.630 0.00 0.00 0.00 2.40
31 32 8.306038 CCATATGAATCTTTGACCAAAACAGAA 58.694 33.333 3.65 0.00 0.00 3.02
32 33 7.669304 TCCATATGAATCTTTGACCAAAACAGA 59.331 33.333 3.65 0.00 0.00 3.41
33 34 7.829725 TCCATATGAATCTTTGACCAAAACAG 58.170 34.615 3.65 0.00 0.00 3.16
34 35 7.773489 TCCATATGAATCTTTGACCAAAACA 57.227 32.000 3.65 0.00 0.00 2.83
35 36 8.087750 TGTTCCATATGAATCTTTGACCAAAAC 58.912 33.333 3.65 0.00 34.90 2.43
36 37 8.187913 TGTTCCATATGAATCTTTGACCAAAA 57.812 30.769 3.65 0.00 34.90 2.44
37 38 7.773489 TGTTCCATATGAATCTTTGACCAAA 57.227 32.000 3.65 0.00 34.90 3.28
38 39 7.773489 TTGTTCCATATGAATCTTTGACCAA 57.227 32.000 3.65 0.00 34.90 3.67
39 40 7.451255 AGTTTGTTCCATATGAATCTTTGACCA 59.549 33.333 3.65 0.00 34.90 4.02
40 41 7.830739 AGTTTGTTCCATATGAATCTTTGACC 58.169 34.615 3.65 0.00 34.90 4.02
41 42 9.132521 CAAGTTTGTTCCATATGAATCTTTGAC 57.867 33.333 3.65 0.00 34.90 3.18
42 43 7.814107 GCAAGTTTGTTCCATATGAATCTTTGA 59.186 33.333 3.65 0.00 34.90 2.69
43 44 7.599621 TGCAAGTTTGTTCCATATGAATCTTTG 59.400 33.333 3.65 0.47 34.90 2.77
44 45 7.599998 GTGCAAGTTTGTTCCATATGAATCTTT 59.400 33.333 3.65 0.00 34.90 2.52
45 46 7.092716 GTGCAAGTTTGTTCCATATGAATCTT 58.907 34.615 3.65 0.00 34.90 2.40
46 47 6.209192 TGTGCAAGTTTGTTCCATATGAATCT 59.791 34.615 3.65 0.00 34.90 2.40
47 48 6.308766 GTGTGCAAGTTTGTTCCATATGAATC 59.691 38.462 3.65 0.00 34.90 2.52
48 49 6.015180 AGTGTGCAAGTTTGTTCCATATGAAT 60.015 34.615 3.65 0.00 34.90 2.57
49 50 5.301551 AGTGTGCAAGTTTGTTCCATATGAA 59.698 36.000 3.65 0.00 0.00 2.57
50 51 4.826733 AGTGTGCAAGTTTGTTCCATATGA 59.173 37.500 3.65 0.00 0.00 2.15
51 52 4.919168 CAGTGTGCAAGTTTGTTCCATATG 59.081 41.667 0.00 0.00 0.00 1.78
52 53 4.584325 ACAGTGTGCAAGTTTGTTCCATAT 59.416 37.500 0.00 0.00 0.00 1.78
53 54 3.951037 ACAGTGTGCAAGTTTGTTCCATA 59.049 39.130 0.00 0.00 0.00 2.74
54 55 2.760092 ACAGTGTGCAAGTTTGTTCCAT 59.240 40.909 0.00 0.00 0.00 3.41
55 56 2.163412 GACAGTGTGCAAGTTTGTTCCA 59.837 45.455 0.00 0.00 0.00 3.53
56 57 2.423538 AGACAGTGTGCAAGTTTGTTCC 59.576 45.455 0.00 0.00 0.00 3.62
57 58 3.764885 AGACAGTGTGCAAGTTTGTTC 57.235 42.857 0.00 0.00 0.00 3.18
58 59 5.637006 TTAAGACAGTGTGCAAGTTTGTT 57.363 34.783 0.00 0.00 0.00 2.83
59 60 5.637006 TTTAAGACAGTGTGCAAGTTTGT 57.363 34.783 0.00 0.00 0.00 2.83
60 61 5.687285 GGATTTAAGACAGTGTGCAAGTTTG 59.313 40.000 0.00 0.00 0.00 2.93
61 62 5.594317 AGGATTTAAGACAGTGTGCAAGTTT 59.406 36.000 0.00 0.00 0.00 2.66
62 63 5.133221 AGGATTTAAGACAGTGTGCAAGTT 58.867 37.500 0.00 0.00 0.00 2.66
63 64 4.718961 AGGATTTAAGACAGTGTGCAAGT 58.281 39.130 0.00 0.00 0.00 3.16
64 65 5.695851 AAGGATTTAAGACAGTGTGCAAG 57.304 39.130 0.00 0.00 0.00 4.01
65 66 7.067615 TGTTTAAGGATTTAAGACAGTGTGCAA 59.932 33.333 0.00 0.00 30.84 4.08
66 67 6.544197 TGTTTAAGGATTTAAGACAGTGTGCA 59.456 34.615 0.00 0.00 30.84 4.57
67 68 6.856426 GTGTTTAAGGATTTAAGACAGTGTGC 59.144 38.462 0.00 0.00 30.84 4.57
68 69 7.069569 CGTGTTTAAGGATTTAAGACAGTGTG 58.930 38.462 0.00 0.00 30.84 3.82
69 70 6.764560 ACGTGTTTAAGGATTTAAGACAGTGT 59.235 34.615 0.00 0.00 30.84 3.55
70 71 7.069569 CACGTGTTTAAGGATTTAAGACAGTG 58.930 38.462 7.58 0.00 30.84 3.66
71 72 6.204108 CCACGTGTTTAAGGATTTAAGACAGT 59.796 38.462 15.65 0.00 30.84 3.55
72 73 6.425721 TCCACGTGTTTAAGGATTTAAGACAG 59.574 38.462 15.65 0.00 30.84 3.51
73 74 6.203338 GTCCACGTGTTTAAGGATTTAAGACA 59.797 38.462 15.65 0.00 30.84 3.41
74 75 6.347969 GGTCCACGTGTTTAAGGATTTAAGAC 60.348 42.308 15.65 8.81 30.84 3.01
75 76 5.702209 GGTCCACGTGTTTAAGGATTTAAGA 59.298 40.000 15.65 0.00 30.84 2.10
76 77 5.470777 TGGTCCACGTGTTTAAGGATTTAAG 59.529 40.000 15.65 0.00 30.84 1.85
77 78 5.374921 TGGTCCACGTGTTTAAGGATTTAA 58.625 37.500 15.65 0.00 31.91 1.52
78 79 4.970711 TGGTCCACGTGTTTAAGGATTTA 58.029 39.130 15.65 0.00 31.91 1.40
79 80 3.822940 TGGTCCACGTGTTTAAGGATTT 58.177 40.909 15.65 0.00 31.91 2.17
80 81 3.495434 TGGTCCACGTGTTTAAGGATT 57.505 42.857 15.65 0.00 31.91 3.01
81 82 3.343617 CATGGTCCACGTGTTTAAGGAT 58.656 45.455 15.65 0.00 31.91 3.24
82 83 2.551287 CCATGGTCCACGTGTTTAAGGA 60.551 50.000 15.65 0.00 34.14 3.36
83 84 1.810151 CCATGGTCCACGTGTTTAAGG 59.190 52.381 15.65 5.34 34.14 2.69
84 85 1.199097 GCCATGGTCCACGTGTTTAAG 59.801 52.381 15.65 0.00 34.14 1.85
85 86 1.202830 AGCCATGGTCCACGTGTTTAA 60.203 47.619 15.65 0.00 34.14 1.52
86 87 0.398696 AGCCATGGTCCACGTGTTTA 59.601 50.000 15.65 0.00 34.14 2.01
87 88 0.889186 GAGCCATGGTCCACGTGTTT 60.889 55.000 15.65 0.00 34.14 2.83
88 89 1.302511 GAGCCATGGTCCACGTGTT 60.303 57.895 15.65 0.00 34.14 3.32
89 90 2.347490 GAGCCATGGTCCACGTGT 59.653 61.111 15.65 0.00 34.14 4.49
106 107 0.179045 CCTCTTAACCATCCAGGCGG 60.179 60.000 0.00 0.00 43.14 6.13
107 108 0.541863 ACCTCTTAACCATCCAGGCG 59.458 55.000 0.00 0.00 43.14 5.52
108 109 2.019156 GCACCTCTTAACCATCCAGGC 61.019 57.143 0.00 0.00 43.14 4.85
109 110 1.408822 GGCACCTCTTAACCATCCAGG 60.409 57.143 0.00 0.00 45.67 4.45
110 111 1.281867 TGGCACCTCTTAACCATCCAG 59.718 52.381 0.00 0.00 0.00 3.86
111 112 1.367346 TGGCACCTCTTAACCATCCA 58.633 50.000 0.00 0.00 0.00 3.41
112 113 2.507407 TTGGCACCTCTTAACCATCC 57.493 50.000 0.00 0.00 30.85 3.51
113 114 2.164422 GCTTTGGCACCTCTTAACCATC 59.836 50.000 0.00 0.00 38.54 3.51
114 115 2.171003 GCTTTGGCACCTCTTAACCAT 58.829 47.619 0.00 0.00 38.54 3.55
115 116 1.616159 GCTTTGGCACCTCTTAACCA 58.384 50.000 0.00 0.00 38.54 3.67
116 117 0.888619 GGCTTTGGCACCTCTTAACC 59.111 55.000 0.00 0.00 40.87 2.85
117 118 1.911057 AGGCTTTGGCACCTCTTAAC 58.089 50.000 0.00 0.00 40.87 2.01
118 119 2.514803 GAAGGCTTTGGCACCTCTTAA 58.485 47.619 0.00 0.00 40.87 1.85
119 120 1.271926 GGAAGGCTTTGGCACCTCTTA 60.272 52.381 0.00 0.00 40.87 2.10
120 121 0.540597 GGAAGGCTTTGGCACCTCTT 60.541 55.000 0.00 0.00 40.87 2.85
121 122 1.075659 GGAAGGCTTTGGCACCTCT 59.924 57.895 0.00 0.00 40.87 3.69
122 123 1.979155 GGGAAGGCTTTGGCACCTC 60.979 63.158 0.00 0.00 40.87 3.85
123 124 2.118294 GGGAAGGCTTTGGCACCT 59.882 61.111 0.00 0.00 40.87 4.00
124 125 2.203625 TGGGAAGGCTTTGGCACC 60.204 61.111 0.00 0.00 40.87 5.01
125 126 2.574018 GGTGGGAAGGCTTTGGCAC 61.574 63.158 0.00 0.00 40.87 5.01
126 127 2.203625 GGTGGGAAGGCTTTGGCA 60.204 61.111 0.00 0.00 40.87 4.92
127 128 2.997315 GGGTGGGAAGGCTTTGGC 60.997 66.667 0.00 0.00 37.82 4.52
128 129 2.676471 CGGGTGGGAAGGCTTTGG 60.676 66.667 0.00 0.00 0.00 3.28
129 130 3.373565 GCGGGTGGGAAGGCTTTG 61.374 66.667 0.00 0.00 0.00 2.77
130 131 4.678743 GGCGGGTGGGAAGGCTTT 62.679 66.667 0.00 0.00 0.00 3.51
140 141 4.796231 CTCGAACTCGGGCGGGTG 62.796 72.222 0.00 0.00 40.29 4.61
147 148 4.421479 ACTGGCGCTCGAACTCGG 62.421 66.667 7.64 0.00 40.29 4.63
148 149 3.175240 CACTGGCGCTCGAACTCG 61.175 66.667 7.64 0.00 41.45 4.18
149 150 3.482783 GCACTGGCGCTCGAACTC 61.483 66.667 7.64 0.00 0.00 3.01
159 160 1.703438 CTGAGAATGCGAGCACTGGC 61.703 60.000 0.00 0.00 41.61 4.85
160 161 0.390866 ACTGAGAATGCGAGCACTGG 60.391 55.000 0.00 0.00 0.00 4.00
161 162 1.128136 CAACTGAGAATGCGAGCACTG 59.872 52.381 0.00 0.00 0.00 3.66
162 163 1.270518 ACAACTGAGAATGCGAGCACT 60.271 47.619 0.00 0.00 0.00 4.40
163 164 1.136141 CACAACTGAGAATGCGAGCAC 60.136 52.381 0.00 0.00 0.00 4.40
164 165 1.150827 CACAACTGAGAATGCGAGCA 58.849 50.000 0.00 0.00 0.00 4.26
165 166 1.151668 ACACAACTGAGAATGCGAGC 58.848 50.000 0.00 0.00 0.00 5.03
166 167 3.121944 GTGTACACAACTGAGAATGCGAG 59.878 47.826 21.14 0.00 0.00 5.03
167 168 3.057019 GTGTACACAACTGAGAATGCGA 58.943 45.455 21.14 0.00 0.00 5.10
168 169 2.159973 CGTGTACACAACTGAGAATGCG 60.160 50.000 24.98 3.16 0.00 4.73
169 170 2.411547 GCGTGTACACAACTGAGAATGC 60.412 50.000 24.98 12.29 0.00 3.56
170 171 2.799978 TGCGTGTACACAACTGAGAATG 59.200 45.455 24.98 6.35 0.00 2.67
171 172 3.106242 TGCGTGTACACAACTGAGAAT 57.894 42.857 24.98 0.00 0.00 2.40
172 173 2.588027 TGCGTGTACACAACTGAGAA 57.412 45.000 24.98 0.00 0.00 2.87
173 174 2.812358 ATGCGTGTACACAACTGAGA 57.188 45.000 24.98 2.01 0.00 3.27
174 175 3.494626 AGAAATGCGTGTACACAACTGAG 59.505 43.478 24.98 9.16 0.00 3.35
175 176 3.462982 AGAAATGCGTGTACACAACTGA 58.537 40.909 24.98 4.54 0.00 3.41
176 177 3.878086 AGAAATGCGTGTACACAACTG 57.122 42.857 24.98 10.23 0.00 3.16
177 178 4.127171 AGAAGAAATGCGTGTACACAACT 58.873 39.130 24.98 11.16 0.00 3.16
178 179 4.468095 AGAAGAAATGCGTGTACACAAC 57.532 40.909 24.98 16.52 0.00 3.32
179 180 6.606234 TTAAGAAGAAATGCGTGTACACAA 57.394 33.333 24.98 13.27 0.00 3.33
180 181 6.348132 CCATTAAGAAGAAATGCGTGTACACA 60.348 38.462 24.98 7.72 33.80 3.72
181 182 6.021596 CCATTAAGAAGAAATGCGTGTACAC 58.978 40.000 16.32 16.32 33.80 2.90
182 183 5.935206 TCCATTAAGAAGAAATGCGTGTACA 59.065 36.000 0.00 0.00 33.80 2.90
183 184 6.417191 TCCATTAAGAAGAAATGCGTGTAC 57.583 37.500 0.00 0.00 33.80 2.90
184 185 7.120579 ACATTCCATTAAGAAGAAATGCGTGTA 59.879 33.333 0.00 0.00 33.80 2.90
185 186 5.957842 TTCCATTAAGAAGAAATGCGTGT 57.042 34.783 0.00 0.00 33.80 4.49
186 187 6.324819 ACATTCCATTAAGAAGAAATGCGTG 58.675 36.000 0.00 0.00 33.80 5.34
187 188 6.515272 ACATTCCATTAAGAAGAAATGCGT 57.485 33.333 0.00 0.00 33.80 5.24
188 189 6.808212 ACAACATTCCATTAAGAAGAAATGCG 59.192 34.615 0.00 0.00 33.80 4.73
189 190 7.063780 CCACAACATTCCATTAAGAAGAAATGC 59.936 37.037 0.00 0.00 33.80 3.56
190 191 7.546667 CCCACAACATTCCATTAAGAAGAAATG 59.453 37.037 0.00 0.00 34.71 2.32
191 192 7.454380 TCCCACAACATTCCATTAAGAAGAAAT 59.546 33.333 0.00 0.00 0.00 2.17
192 193 6.780031 TCCCACAACATTCCATTAAGAAGAAA 59.220 34.615 0.00 0.00 0.00 2.52
193 194 6.310941 TCCCACAACATTCCATTAAGAAGAA 58.689 36.000 0.00 0.00 0.00 2.52
194 195 5.886609 TCCCACAACATTCCATTAAGAAGA 58.113 37.500 0.00 0.00 0.00 2.87
195 196 6.780457 ATCCCACAACATTCCATTAAGAAG 57.220 37.500 0.00 0.00 0.00 2.85
196 197 6.496565 ACAATCCCACAACATTCCATTAAGAA 59.503 34.615 0.00 0.00 0.00 2.52
197 198 6.015918 ACAATCCCACAACATTCCATTAAGA 58.984 36.000 0.00 0.00 0.00 2.10
198 199 6.153340 AGACAATCCCACAACATTCCATTAAG 59.847 38.462 0.00 0.00 0.00 1.85
199 200 6.015918 AGACAATCCCACAACATTCCATTAA 58.984 36.000 0.00 0.00 0.00 1.40
200 201 5.579047 AGACAATCCCACAACATTCCATTA 58.421 37.500 0.00 0.00 0.00 1.90
201 202 4.419282 AGACAATCCCACAACATTCCATT 58.581 39.130 0.00 0.00 0.00 3.16
202 203 4.051661 AGACAATCCCACAACATTCCAT 57.948 40.909 0.00 0.00 0.00 3.41
203 204 3.524095 AGACAATCCCACAACATTCCA 57.476 42.857 0.00 0.00 0.00 3.53
204 205 4.157840 GGTTAGACAATCCCACAACATTCC 59.842 45.833 0.00 0.00 0.00 3.01
205 206 4.157840 GGGTTAGACAATCCCACAACATTC 59.842 45.833 0.00 0.00 40.79 2.67
206 207 4.086457 GGGTTAGACAATCCCACAACATT 58.914 43.478 0.00 0.00 40.79 2.71
207 208 3.075283 TGGGTTAGACAATCCCACAACAT 59.925 43.478 0.00 0.00 45.19 2.71
208 209 2.443632 TGGGTTAGACAATCCCACAACA 59.556 45.455 0.00 0.00 45.19 3.33
209 210 3.149005 TGGGTTAGACAATCCCACAAC 57.851 47.619 0.00 0.00 45.19 3.32
214 215 2.169769 TGATCGTGGGTTAGACAATCCC 59.830 50.000 0.00 0.00 41.41 3.85
215 216 3.536956 TGATCGTGGGTTAGACAATCC 57.463 47.619 0.00 0.00 35.24 3.01
216 217 4.567159 GTCTTGATCGTGGGTTAGACAATC 59.433 45.833 0.00 0.00 33.86 2.67
217 218 4.504858 GTCTTGATCGTGGGTTAGACAAT 58.495 43.478 0.00 0.00 33.86 2.71
218 219 3.613193 CGTCTTGATCGTGGGTTAGACAA 60.613 47.826 0.00 0.00 33.40 3.18
219 220 2.094906 CGTCTTGATCGTGGGTTAGACA 60.095 50.000 0.00 0.00 33.40 3.41
220 221 2.527100 CGTCTTGATCGTGGGTTAGAC 58.473 52.381 0.00 0.00 0.00 2.59
221 222 1.135199 GCGTCTTGATCGTGGGTTAGA 60.135 52.381 0.00 0.00 0.00 2.10
222 223 1.278238 GCGTCTTGATCGTGGGTTAG 58.722 55.000 0.00 0.00 0.00 2.34
223 224 0.108520 GGCGTCTTGATCGTGGGTTA 60.109 55.000 0.00 0.00 0.00 2.85
224 225 1.375523 GGCGTCTTGATCGTGGGTT 60.376 57.895 0.00 0.00 0.00 4.11
225 226 2.264794 GGCGTCTTGATCGTGGGT 59.735 61.111 0.00 0.00 0.00 4.51
226 227 2.885644 CGGCGTCTTGATCGTGGG 60.886 66.667 0.00 0.00 0.00 4.61
227 228 3.554692 GCGGCGTCTTGATCGTGG 61.555 66.667 9.37 0.00 0.00 4.94
228 229 2.809174 TGCGGCGTCTTGATCGTG 60.809 61.111 9.37 0.00 0.00 4.35
229 230 2.809601 GTGCGGCGTCTTGATCGT 60.810 61.111 9.37 0.00 0.00 3.73
230 231 3.554692 GGTGCGGCGTCTTGATCG 61.555 66.667 9.37 0.00 0.00 3.69
231 232 3.554692 CGGTGCGGCGTCTTGATC 61.555 66.667 9.37 0.00 0.00 2.92
232 233 3.583276 TTCGGTGCGGCGTCTTGAT 62.583 57.895 9.37 0.00 0.00 2.57
233 234 3.793775 TTTCGGTGCGGCGTCTTGA 62.794 57.895 9.37 0.00 0.00 3.02
234 235 2.887889 TTTTCGGTGCGGCGTCTTG 61.888 57.895 9.37 0.00 0.00 3.02
235 236 2.589442 TTTTCGGTGCGGCGTCTT 60.589 55.556 9.37 0.00 0.00 3.01
236 237 3.343421 GTTTTCGGTGCGGCGTCT 61.343 61.111 9.37 0.00 0.00 4.18
237 238 4.379143 GGTTTTCGGTGCGGCGTC 62.379 66.667 9.37 0.91 0.00 5.19
239 240 1.913451 TATTGGTTTTCGGTGCGGCG 61.913 55.000 0.51 0.51 0.00 6.46
240 241 0.179174 CTATTGGTTTTCGGTGCGGC 60.179 55.000 0.00 0.00 0.00 6.53
241 242 1.444836 TCTATTGGTTTTCGGTGCGG 58.555 50.000 0.00 0.00 0.00 5.69
242 243 3.231160 GTTTCTATTGGTTTTCGGTGCG 58.769 45.455 0.00 0.00 0.00 5.34
243 244 3.004944 TGGTTTCTATTGGTTTTCGGTGC 59.995 43.478 0.00 0.00 0.00 5.01
244 245 4.839668 TGGTTTCTATTGGTTTTCGGTG 57.160 40.909 0.00 0.00 0.00 4.94
245 246 4.261280 CGTTGGTTTCTATTGGTTTTCGGT 60.261 41.667 0.00 0.00 0.00 4.69
246 247 4.223659 CGTTGGTTTCTATTGGTTTTCGG 58.776 43.478 0.00 0.00 0.00 4.30
247 248 3.666797 GCGTTGGTTTCTATTGGTTTTCG 59.333 43.478 0.00 0.00 0.00 3.46
248 249 4.866921 AGCGTTGGTTTCTATTGGTTTTC 58.133 39.130 0.00 0.00 0.00 2.29
249 250 4.929819 AGCGTTGGTTTCTATTGGTTTT 57.070 36.364 0.00 0.00 0.00 2.43
250 251 4.583073 AGAAGCGTTGGTTTCTATTGGTTT 59.417 37.500 0.00 0.00 41.27 3.27
251 252 4.023193 CAGAAGCGTTGGTTTCTATTGGTT 60.023 41.667 0.00 0.00 41.15 3.67
252 253 3.502211 CAGAAGCGTTGGTTTCTATTGGT 59.498 43.478 0.00 0.00 41.15 3.67
253 254 3.670627 GCAGAAGCGTTGGTTTCTATTGG 60.671 47.826 0.00 0.00 41.15 3.16
254 255 3.492313 GCAGAAGCGTTGGTTTCTATTG 58.508 45.455 0.00 0.00 41.15 1.90
255 256 3.831715 GCAGAAGCGTTGGTTTCTATT 57.168 42.857 0.00 0.00 41.15 1.73
275 276 2.022129 GTGTGGACGTTGCGAGGAG 61.022 63.158 0.00 0.00 0.00 3.69
276 277 2.028484 GTGTGGACGTTGCGAGGA 59.972 61.111 0.00 0.00 0.00 3.71
277 278 2.022129 GAGTGTGGACGTTGCGAGG 61.022 63.158 0.00 0.00 0.00 4.63
278 279 0.667487 ATGAGTGTGGACGTTGCGAG 60.667 55.000 0.00 0.00 0.00 5.03
279 280 0.943835 CATGAGTGTGGACGTTGCGA 60.944 55.000 0.00 0.00 0.00 5.10
280 281 1.492873 CATGAGTGTGGACGTTGCG 59.507 57.895 0.00 0.00 0.00 4.85
281 282 1.207593 GCATGAGTGTGGACGTTGC 59.792 57.895 0.00 0.00 0.00 4.17
282 283 1.069703 CAAGCATGAGTGTGGACGTTG 60.070 52.381 0.00 0.00 0.00 4.10
283 284 1.229428 CAAGCATGAGTGTGGACGTT 58.771 50.000 0.00 0.00 0.00 3.99
284 285 0.106708 ACAAGCATGAGTGTGGACGT 59.893 50.000 0.00 0.00 0.00 4.34
285 286 1.995484 CTACAAGCATGAGTGTGGACG 59.005 52.381 10.94 0.00 0.00 4.79
286 287 2.738846 CACTACAAGCATGAGTGTGGAC 59.261 50.000 16.14 0.00 36.62 4.02
287 288 2.632512 TCACTACAAGCATGAGTGTGGA 59.367 45.455 16.14 7.40 41.14 4.02
288 289 2.998670 CTCACTACAAGCATGAGTGTGG 59.001 50.000 15.91 10.42 41.14 4.17
289 290 2.998670 CCTCACTACAAGCATGAGTGTG 59.001 50.000 15.91 14.13 41.14 3.82
290 291 2.613977 GCCTCACTACAAGCATGAGTGT 60.614 50.000 15.91 8.66 41.14 3.55
291 292 2.005451 GCCTCACTACAAGCATGAGTG 58.995 52.381 12.40 12.40 41.62 3.51
292 293 1.905215 AGCCTCACTACAAGCATGAGT 59.095 47.619 0.00 0.00 38.56 3.41
293 294 2.548875 GAGCCTCACTACAAGCATGAG 58.451 52.381 0.00 0.00 39.70 2.90
294 295 1.208052 GGAGCCTCACTACAAGCATGA 59.792 52.381 0.00 0.00 0.00 3.07
295 296 1.209019 AGGAGCCTCACTACAAGCATG 59.791 52.381 0.00 0.00 0.00 4.06
296 297 1.484240 GAGGAGCCTCACTACAAGCAT 59.516 52.381 11.58 0.00 42.31 3.79
297 298 0.898320 GAGGAGCCTCACTACAAGCA 59.102 55.000 11.58 0.00 42.31 3.91
298 299 0.179124 CGAGGAGCCTCACTACAAGC 60.179 60.000 16.23 0.00 42.86 4.01
299 300 0.179124 GCGAGGAGCCTCACTACAAG 60.179 60.000 16.23 0.00 42.86 3.16
300 301 1.890894 GCGAGGAGCCTCACTACAA 59.109 57.895 16.23 0.00 42.86 2.41
301 302 3.604629 GCGAGGAGCCTCACTACA 58.395 61.111 16.23 0.00 42.86 2.74
311 312 0.387878 GAGTGTGACTGTGCGAGGAG 60.388 60.000 0.00 0.00 0.00 3.69
312 313 1.660355 GAGTGTGACTGTGCGAGGA 59.340 57.895 0.00 0.00 0.00 3.71
313 314 1.730902 CGAGTGTGACTGTGCGAGG 60.731 63.158 0.00 0.00 0.00 4.63
314 315 2.368105 GCGAGTGTGACTGTGCGAG 61.368 63.158 0.00 0.00 0.00 5.03
315 316 2.354656 GCGAGTGTGACTGTGCGA 60.355 61.111 0.00 0.00 0.00 5.10
316 317 3.756677 CGCGAGTGTGACTGTGCG 61.757 66.667 0.00 5.80 41.20 5.34
317 318 1.734477 ATCGCGAGTGTGACTGTGC 60.734 57.895 16.66 0.00 37.46 4.57
318 319 1.949015 GCATCGCGAGTGTGACTGTG 61.949 60.000 16.66 5.50 37.46 3.66
319 320 1.734477 GCATCGCGAGTGTGACTGT 60.734 57.895 16.66 0.00 37.46 3.55
320 321 1.445066 AGCATCGCGAGTGTGACTG 60.445 57.895 16.66 7.14 37.46 3.51
321 322 1.445066 CAGCATCGCGAGTGTGACT 60.445 57.895 16.66 7.10 37.46 3.41
322 323 3.075998 CAGCATCGCGAGTGTGAC 58.924 61.111 16.66 4.84 37.46 3.67
323 324 2.810887 GCAGCATCGCGAGTGTGA 60.811 61.111 16.66 0.00 39.32 3.58
324 325 2.796425 GAGCAGCATCGCGAGTGTG 61.796 63.158 16.66 9.64 36.85 3.82
325 326 2.507992 GAGCAGCATCGCGAGTGT 60.508 61.111 16.66 0.00 36.85 3.55
326 327 3.614659 CGAGCAGCATCGCGAGTG 61.615 66.667 16.66 13.09 35.66 3.51
344 345 1.597797 AAATGTGAGGTGGCGCATGG 61.598 55.000 10.83 0.00 38.85 3.66
345 346 1.093972 TAAATGTGAGGTGGCGCATG 58.906 50.000 10.83 0.00 38.85 4.06
346 347 1.094785 GTAAATGTGAGGTGGCGCAT 58.905 50.000 10.83 0.00 40.47 4.73
347 348 0.958382 GGTAAATGTGAGGTGGCGCA 60.958 55.000 10.83 0.00 0.00 6.09
348 349 1.800681 GGTAAATGTGAGGTGGCGC 59.199 57.895 0.00 0.00 0.00 6.53
349 350 1.977594 GCGGTAAATGTGAGGTGGCG 61.978 60.000 0.00 0.00 0.00 5.69
350 351 0.676782 AGCGGTAAATGTGAGGTGGC 60.677 55.000 0.00 0.00 0.00 5.01
351 352 1.066143 AGAGCGGTAAATGTGAGGTGG 60.066 52.381 0.00 0.00 0.00 4.61
352 353 2.386661 AGAGCGGTAAATGTGAGGTG 57.613 50.000 0.00 0.00 0.00 4.00
353 354 3.418684 AAAGAGCGGTAAATGTGAGGT 57.581 42.857 0.00 0.00 0.00 3.85
354 355 3.502211 ACAAAAGAGCGGTAAATGTGAGG 59.498 43.478 0.00 0.00 0.00 3.86
355 356 4.749245 ACAAAAGAGCGGTAAATGTGAG 57.251 40.909 0.00 0.00 0.00 3.51
356 357 4.336993 ACAACAAAAGAGCGGTAAATGTGA 59.663 37.500 0.00 0.00 0.00 3.58
357 358 4.606961 ACAACAAAAGAGCGGTAAATGTG 58.393 39.130 0.00 0.00 0.00 3.21
358 359 4.553938 CGACAACAAAAGAGCGGTAAATGT 60.554 41.667 0.00 0.00 0.00 2.71
359 360 3.906008 CGACAACAAAAGAGCGGTAAATG 59.094 43.478 0.00 0.00 0.00 2.32
360 361 3.058501 CCGACAACAAAAGAGCGGTAAAT 60.059 43.478 0.00 0.00 34.45 1.40
361 362 2.288458 CCGACAACAAAAGAGCGGTAAA 59.712 45.455 0.00 0.00 34.45 2.01
362 363 1.868498 CCGACAACAAAAGAGCGGTAA 59.132 47.619 0.00 0.00 34.45 2.85
363 364 1.504359 CCGACAACAAAAGAGCGGTA 58.496 50.000 0.00 0.00 34.45 4.02
364 365 0.463116 ACCGACAACAAAAGAGCGGT 60.463 50.000 0.00 0.00 46.10 5.68
365 366 0.661020 AACCGACAACAAAAGAGCGG 59.339 50.000 0.00 0.00 43.95 5.52
366 367 2.468532 AAACCGACAACAAAAGAGCG 57.531 45.000 0.00 0.00 0.00 5.03
367 368 3.241963 GCAAAAACCGACAACAAAAGAGC 60.242 43.478 0.00 0.00 0.00 4.09
368 369 4.173256 AGCAAAAACCGACAACAAAAGAG 58.827 39.130 0.00 0.00 0.00 2.85
369 370 4.170256 GAGCAAAAACCGACAACAAAAGA 58.830 39.130 0.00 0.00 0.00 2.52
370 371 3.001168 CGAGCAAAAACCGACAACAAAAG 60.001 43.478 0.00 0.00 0.00 2.27
371 372 2.917971 CGAGCAAAAACCGACAACAAAA 59.082 40.909 0.00 0.00 0.00 2.44
372 373 2.095161 ACGAGCAAAAACCGACAACAAA 60.095 40.909 0.00 0.00 0.00 2.83
373 374 1.469308 ACGAGCAAAAACCGACAACAA 59.531 42.857 0.00 0.00 0.00 2.83
374 375 1.088306 ACGAGCAAAAACCGACAACA 58.912 45.000 0.00 0.00 0.00 3.33
375 376 2.600556 GGTACGAGCAAAAACCGACAAC 60.601 50.000 0.00 0.00 0.00 3.32
376 377 1.598601 GGTACGAGCAAAAACCGACAA 59.401 47.619 0.00 0.00 0.00 3.18
377 378 1.219646 GGTACGAGCAAAAACCGACA 58.780 50.000 0.00 0.00 0.00 4.35
391 392 3.489147 TGTTACGAACATTGCCGGTACG 61.489 50.000 1.90 0.00 44.83 3.67
392 393 2.067766 TGTTACGAACATTGCCGGTAC 58.932 47.619 1.90 0.00 36.25 3.34
393 394 2.452295 TGTTACGAACATTGCCGGTA 57.548 45.000 1.90 0.00 36.25 4.02
394 395 1.595466 TTGTTACGAACATTGCCGGT 58.405 45.000 1.90 0.00 41.79 5.28
395 396 2.911819 ATTGTTACGAACATTGCCGG 57.088 45.000 0.00 0.00 41.79 6.13
396 397 3.978217 ACAAATTGTTACGAACATTGCCG 59.022 39.130 0.00 0.00 41.79 5.69
397 398 5.898630 AACAAATTGTTACGAACATTGCC 57.101 34.783 9.92 0.00 39.09 4.52
398 399 6.838806 GTCAAACAAATTGTTACGAACATTGC 59.161 34.615 12.11 0.00 40.14 3.56
399 400 7.838879 GTGTCAAACAAATTGTTACGAACATTG 59.161 33.333 12.11 4.37 40.14 2.82
400 401 7.009723 GGTGTCAAACAAATTGTTACGAACATT 59.990 33.333 12.11 0.00 40.14 2.71
401 402 6.474102 GGTGTCAAACAAATTGTTACGAACAT 59.526 34.615 12.11 0.00 40.14 2.71
402 403 5.800941 GGTGTCAAACAAATTGTTACGAACA 59.199 36.000 12.11 10.65 40.14 3.18
403 404 5.230516 GGGTGTCAAACAAATTGTTACGAAC 59.769 40.000 12.11 8.55 40.14 3.95
404 405 5.105877 TGGGTGTCAAACAAATTGTTACGAA 60.106 36.000 12.11 0.00 40.14 3.85
405 406 4.398358 TGGGTGTCAAACAAATTGTTACGA 59.602 37.500 12.11 9.02 40.14 3.43
406 407 4.673441 TGGGTGTCAAACAAATTGTTACG 58.327 39.130 12.11 6.81 40.14 3.18
407 408 6.758886 TGATTGGGTGTCAAACAAATTGTTAC 59.241 34.615 12.11 8.17 40.14 2.50
408 409 6.878317 TGATTGGGTGTCAAACAAATTGTTA 58.122 32.000 12.11 0.00 40.14 2.41
409 410 5.738909 TGATTGGGTGTCAAACAAATTGTT 58.261 33.333 5.41 5.41 43.41 2.83
410 411 5.350504 TGATTGGGTGTCAAACAAATTGT 57.649 34.783 0.00 0.00 40.11 2.71
411 412 5.007528 GGTTGATTGGGTGTCAAACAAATTG 59.992 40.000 3.65 0.00 45.37 2.32
412 413 5.122519 GGTTGATTGGGTGTCAAACAAATT 58.877 37.500 3.65 0.00 45.37 1.82
413 414 4.163078 TGGTTGATTGGGTGTCAAACAAAT 59.837 37.500 4.28 0.00 46.87 2.32
414 415 3.515502 TGGTTGATTGGGTGTCAAACAAA 59.484 39.130 4.28 0.00 46.87 2.83
415 416 3.099905 TGGTTGATTGGGTGTCAAACAA 58.900 40.909 4.28 0.00 46.87 2.83
417 418 3.611530 CGATGGTTGATTGGGTGTCAAAC 60.612 47.826 0.00 0.00 42.28 2.93
418 419 2.556189 CGATGGTTGATTGGGTGTCAAA 59.444 45.455 0.00 0.00 39.05 2.69
419 420 2.158559 CGATGGTTGATTGGGTGTCAA 58.841 47.619 0.00 0.00 40.01 3.18
420 421 1.349357 TCGATGGTTGATTGGGTGTCA 59.651 47.619 0.00 0.00 0.00 3.58
421 422 2.009774 CTCGATGGTTGATTGGGTGTC 58.990 52.381 0.00 0.00 0.00 3.67
422 423 1.628340 TCTCGATGGTTGATTGGGTGT 59.372 47.619 0.00 0.00 0.00 4.16
423 424 2.093500 TCTCTCGATGGTTGATTGGGTG 60.093 50.000 0.00 0.00 0.00 4.61
424 425 2.187958 TCTCTCGATGGTTGATTGGGT 58.812 47.619 0.00 0.00 0.00 4.51
425 426 2.988010 TCTCTCGATGGTTGATTGGG 57.012 50.000 0.00 0.00 0.00 4.12
426 427 3.397482 GGATCTCTCGATGGTTGATTGG 58.603 50.000 0.00 0.00 0.00 3.16
427 428 3.055591 CGGATCTCTCGATGGTTGATTG 58.944 50.000 0.00 0.00 0.00 2.67
428 429 2.036475 CCGGATCTCTCGATGGTTGATT 59.964 50.000 0.00 0.00 0.00 2.57
429 430 1.615883 CCGGATCTCTCGATGGTTGAT 59.384 52.381 0.00 0.00 0.00 2.57
430 431 1.032794 CCGGATCTCTCGATGGTTGA 58.967 55.000 0.00 0.00 0.00 3.18
431 432 0.747255 ACCGGATCTCTCGATGGTTG 59.253 55.000 9.46 0.00 0.00 3.77
432 433 0.747255 CACCGGATCTCTCGATGGTT 59.253 55.000 9.46 0.00 0.00 3.67
433 434 1.739338 GCACCGGATCTCTCGATGGT 61.739 60.000 9.46 0.00 0.00 3.55
434 435 1.006805 GCACCGGATCTCTCGATGG 60.007 63.158 9.46 0.00 0.00 3.51
435 436 0.387202 AAGCACCGGATCTCTCGATG 59.613 55.000 9.46 0.00 0.00 3.84
436 437 0.387202 CAAGCACCGGATCTCTCGAT 59.613 55.000 9.46 0.00 0.00 3.59
437 438 0.679960 TCAAGCACCGGATCTCTCGA 60.680 55.000 9.46 0.00 0.00 4.04
438 439 0.173481 TTCAAGCACCGGATCTCTCG 59.827 55.000 9.46 0.00 0.00 4.04
488 489 5.168569 ACACACGGTGATTATCTAGTGTTG 58.831 41.667 16.29 12.68 40.32 3.33
490 491 5.168569 CAACACACGGTGATTATCTAGTGT 58.831 41.667 16.29 12.30 42.63 3.55
504 505 2.897846 TCCCGTTGCAACACACGG 60.898 61.111 28.01 23.21 40.47 4.94
506 507 1.231221 TATGTCCCGTTGCAACACAC 58.769 50.000 28.01 19.83 0.00 3.82
507 508 1.968704 TTATGTCCCGTTGCAACACA 58.031 45.000 28.01 23.54 0.00 3.72
508 509 3.569250 ATTTATGTCCCGTTGCAACAC 57.431 42.857 28.01 18.97 0.00 3.32
509 510 5.650266 AGAATATTTATGTCCCGTTGCAACA 59.350 36.000 28.01 10.57 0.00 3.33
554 556 9.793252 GGATAAATACATATTAATGCAAGCAGG 57.207 33.333 0.00 0.00 36.50 4.85
580 582 9.701355 GTGTTTATCAAATCAAACCAAGTTTTG 57.299 29.630 0.00 0.00 37.75 2.44
588 590 7.042119 CCAAAGGTGTGTTTATCAAATCAAACC 60.042 37.037 0.00 0.00 38.17 3.27
589 591 7.518211 GCCAAAGGTGTGTTTATCAAATCAAAC 60.518 37.037 0.00 0.00 35.63 2.93
656 662 1.810151 TCATTTAACCGGCTCAACTGC 59.190 47.619 0.00 0.00 0.00 4.40
674 680 2.043992 TCCTCCGGTCTCTGTTTTTCA 58.956 47.619 0.00 0.00 0.00 2.69
749 3675 1.673920 GTCCCACGTGCAGAAGAAAAA 59.326 47.619 10.91 0.00 0.00 1.94
750 3676 1.305201 GTCCCACGTGCAGAAGAAAA 58.695 50.000 10.91 0.00 0.00 2.29
751 3677 0.179234 TGTCCCACGTGCAGAAGAAA 59.821 50.000 10.91 0.00 0.00 2.52
752 3678 0.179234 TTGTCCCACGTGCAGAAGAA 59.821 50.000 10.91 3.11 0.00 2.52
753 3679 0.396435 ATTGTCCCACGTGCAGAAGA 59.604 50.000 10.91 1.80 0.00 2.87
754 3680 1.238439 AATTGTCCCACGTGCAGAAG 58.762 50.000 10.91 0.00 0.00 2.85
755 3681 2.552599 TAATTGTCCCACGTGCAGAA 57.447 45.000 10.91 3.82 0.00 3.02
828 3786 4.530857 CGGGATGGACGGAGGTGC 62.531 72.222 0.00 0.00 34.67 5.01
854 3815 3.902881 AATGGCACTTCTGTCTCCTAG 57.097 47.619 0.00 0.00 0.00 3.02
864 3825 2.887152 ACTGGTTCTGAAATGGCACTTC 59.113 45.455 0.94 0.94 0.00 3.01
889 3850 3.728292 GATGGGCTTCAGCAGGGGG 62.728 68.421 0.30 0.00 44.36 5.40
912 3873 1.544537 GCTAGAGCGAGAGATGGGAGA 60.545 57.143 0.00 0.00 0.00 3.71
916 3877 0.313672 GGTGCTAGAGCGAGAGATGG 59.686 60.000 0.00 0.00 45.83 3.51
918 3879 0.184933 AGGGTGCTAGAGCGAGAGAT 59.815 55.000 0.00 0.00 45.83 2.75
919 3880 0.033991 AAGGGTGCTAGAGCGAGAGA 60.034 55.000 0.00 0.00 45.83 3.10
921 3882 2.193532 CAAGGGTGCTAGAGCGAGA 58.806 57.895 0.00 0.00 45.83 4.04
932 3893 2.028130 TGTGGTTTTGTAGCAAGGGTG 58.972 47.619 0.00 0.00 35.72 4.61
933 3894 2.445682 TGTGGTTTTGTAGCAAGGGT 57.554 45.000 0.00 0.00 35.72 4.34
934 3895 2.955660 TCTTGTGGTTTTGTAGCAAGGG 59.044 45.455 0.00 0.00 37.65 3.95
935 3896 3.004734 CCTCTTGTGGTTTTGTAGCAAGG 59.995 47.826 0.00 0.00 37.65 3.61
936 3897 3.550842 GCCTCTTGTGGTTTTGTAGCAAG 60.551 47.826 0.00 0.00 35.72 4.01
937 3898 2.360801 GCCTCTTGTGGTTTTGTAGCAA 59.639 45.455 0.00 0.00 35.72 3.91
938 3899 1.953686 GCCTCTTGTGGTTTTGTAGCA 59.046 47.619 0.00 0.00 0.00 3.49
1332 4351 3.446570 GGGTGGTGATGCTGCTGC 61.447 66.667 8.89 8.89 40.20 5.25
1334 4353 1.616327 TAGGGGTGGTGATGCTGCT 60.616 57.895 0.00 0.00 0.00 4.24
1404 4423 2.613506 GGGTGTGCGTTGGTAGTGC 61.614 63.158 0.00 0.00 0.00 4.40
1710 4729 0.536006 GTTGCTGCTGTTGGGACTCT 60.536 55.000 0.00 0.00 0.00 3.24
1711 4730 0.819259 TGTTGCTGCTGTTGGGACTC 60.819 55.000 0.00 0.00 0.00 3.36
1767 4817 0.815615 GATGTGGGGATTCGTGAGCC 60.816 60.000 0.00 0.00 0.00 4.70
1821 4871 6.231211 TCACTTCACTCTCCCTGTTTAATTC 58.769 40.000 0.00 0.00 0.00 2.17
1834 4884 4.446371 CTGGTTTCACTTCACTTCACTCT 58.554 43.478 0.00 0.00 0.00 3.24
1890 4941 6.176183 ACCATGATCAAGAACAGGAAGTAAG 58.824 40.000 0.00 0.00 0.00 2.34
1924 4975 4.898861 AGGAATCCAGTTAAACCAAGCAAA 59.101 37.500 0.61 0.00 0.00 3.68
1966 5017 5.009010 GCAATCGTCATCCCAATTAACTGAT 59.991 40.000 0.00 0.00 0.00 2.90
1984 5035 5.005490 CCTCATTATCATCATCGAGCAATCG 59.995 44.000 0.00 0.00 0.00 3.34
1985 5036 5.293814 CCCTCATTATCATCATCGAGCAATC 59.706 44.000 0.00 0.00 0.00 2.67
1986 5037 5.183969 CCCTCATTATCATCATCGAGCAAT 58.816 41.667 0.00 0.00 0.00 3.56
1987 5038 4.040829 ACCCTCATTATCATCATCGAGCAA 59.959 41.667 0.00 0.00 0.00 3.91
1988 5039 3.580022 ACCCTCATTATCATCATCGAGCA 59.420 43.478 0.00 0.00 0.00 4.26
1989 5040 4.199432 ACCCTCATTATCATCATCGAGC 57.801 45.455 0.00 0.00 0.00 5.03
1990 5041 6.151817 TGAGTACCCTCATTATCATCATCGAG 59.848 42.308 0.00 0.00 42.80 4.04
1991 5042 6.010219 TGAGTACCCTCATTATCATCATCGA 58.990 40.000 0.00 0.00 42.80 3.59
1992 5043 6.151817 TCTGAGTACCCTCATTATCATCATCG 59.848 42.308 0.00 0.00 46.38 3.84
1995 5046 6.377080 ACTCTGAGTACCCTCATTATCATCA 58.623 40.000 8.91 0.00 46.38 3.07
2002 5053 7.156694 AGTATAGACTCTGAGTACCCTCATT 57.843 40.000 10.86 0.00 46.38 2.57
2048 5099 6.691508 TGATCTTCTTGTGAGAGATTTCGAA 58.308 36.000 0.00 0.00 32.44 3.71
2050 5101 6.098679 ACTGATCTTCTTGTGAGAGATTTCG 58.901 40.000 0.00 0.00 32.44 3.46
2051 5102 7.623925 GCAACTGATCTTCTTGTGAGAGATTTC 60.624 40.741 0.00 0.00 32.44 2.17
2053 5104 5.642919 GCAACTGATCTTCTTGTGAGAGATT 59.357 40.000 0.00 0.00 32.44 2.40
2054 5105 5.177326 GCAACTGATCTTCTTGTGAGAGAT 58.823 41.667 0.00 0.00 32.44 2.75
2056 5107 3.683822 GGCAACTGATCTTCTTGTGAGAG 59.316 47.826 0.00 0.00 32.44 3.20
2058 5109 2.746362 GGGCAACTGATCTTCTTGTGAG 59.254 50.000 0.00 0.00 0.00 3.51
2077 5143 1.135024 CATGAAGGAAATTGCCGTGGG 60.135 52.381 0.00 0.00 0.00 4.61
2102 5168 7.794041 AGATGAAAGATCTAGTCTTGAGCAAT 58.206 34.615 0.00 0.00 46.39 3.56
2143 5209 1.247567 ATAGCAGCACCACCAAACAC 58.752 50.000 0.00 0.00 0.00 3.32
2144 5210 1.993956 AATAGCAGCACCACCAAACA 58.006 45.000 0.00 0.00 0.00 2.83
2145 5211 2.558359 AGAAATAGCAGCACCACCAAAC 59.442 45.455 0.00 0.00 0.00 2.93
2146 5212 2.819608 GAGAAATAGCAGCACCACCAAA 59.180 45.455 0.00 0.00 0.00 3.28
2147 5213 2.436417 GAGAAATAGCAGCACCACCAA 58.564 47.619 0.00 0.00 0.00 3.67
2148 5214 1.675714 CGAGAAATAGCAGCACCACCA 60.676 52.381 0.00 0.00 0.00 4.17
2149 5215 1.009829 CGAGAAATAGCAGCACCACC 58.990 55.000 0.00 0.00 0.00 4.61
2159 5225 8.443160 TGTATTTGAAAGAACAGCGAGAAATAG 58.557 33.333 0.00 0.00 0.00 1.73
2183 5249 5.065602 CCAACAACATGATCGATGATTCTGT 59.934 40.000 0.54 2.55 35.80 3.41
2202 5268 3.027412 TGCTGGTTTTTAAGCTCCAACA 58.973 40.909 0.00 0.00 0.00 3.33
2241 5308 5.863935 TGTCTTATCACTGTCTCGTTGAATG 59.136 40.000 0.00 0.00 0.00 2.67
2319 5393 1.444836 TTCTGGCCGGTGTTAAATCG 58.555 50.000 12.43 0.00 0.00 3.34
2329 5404 2.550978 CAGTAAGTACATTCTGGCCGG 58.449 52.381 4.71 4.71 0.00 6.13
2336 5411 6.992715 AGCATATGTTCCCAGTAAGTACATTC 59.007 38.462 4.29 0.00 32.23 2.67
2374 5462 5.066505 CCAGGTTTAGTTGGTGCTGATAATC 59.933 44.000 0.00 0.00 0.00 1.75
2395 5483 1.241165 TGTGTTCTTGATGCAGCCAG 58.759 50.000 0.00 0.00 0.00 4.85
2397 5485 1.734707 GCATGTGTTCTTGATGCAGCC 60.735 52.381 0.00 0.00 41.78 4.85
2426 5514 3.678072 AGATAAACACACACGGATGAACG 59.322 43.478 0.00 0.00 40.31 3.95
2479 5577 5.763204 TCTCTTCTTTGGCAAAATCTTACGT 59.237 36.000 14.43 0.00 0.00 3.57
2480 5578 6.241207 TCTCTTCTTTGGCAAAATCTTACG 57.759 37.500 14.43 0.45 0.00 3.18
2481 5579 8.871686 TTTTCTCTTCTTTGGCAAAATCTTAC 57.128 30.769 14.43 0.00 0.00 2.34
2531 5636 6.295632 GGTTTGGATAAGGGCAACTTGTATTT 60.296 38.462 3.41 0.00 40.37 1.40
2532 5637 5.186992 GGTTTGGATAAGGGCAACTTGTATT 59.813 40.000 3.41 0.00 40.37 1.89
2533 5638 4.709886 GGTTTGGATAAGGGCAACTTGTAT 59.290 41.667 3.41 0.00 40.37 2.29
2534 5639 4.083565 GGTTTGGATAAGGGCAACTTGTA 58.916 43.478 3.41 0.00 40.37 2.41
2536 5641 2.896685 TGGTTTGGATAAGGGCAACTTG 59.103 45.455 3.41 0.00 40.37 3.16
2538 5643 2.378547 TCTGGTTTGGATAAGGGCAACT 59.621 45.455 0.00 0.00 0.00 3.16
2539 5644 2.802719 TCTGGTTTGGATAAGGGCAAC 58.197 47.619 0.00 0.00 0.00 4.17
2540 5645 3.627237 GGATCTGGTTTGGATAAGGGCAA 60.627 47.826 0.00 0.00 0.00 4.52
2541 5646 2.091885 GGATCTGGTTTGGATAAGGGCA 60.092 50.000 0.00 0.00 0.00 5.36
2599 5846 2.083774 CTTCTTCGGCAAACATAGGCA 58.916 47.619 0.00 0.00 0.00 4.75
2621 5868 2.435422 TGAAGCGAAATCCTTGCATCA 58.565 42.857 0.00 0.00 34.38 3.07
2625 5872 1.745087 TCCATGAAGCGAAATCCTTGC 59.255 47.619 0.00 0.00 0.00 4.01
2699 5947 2.352814 GCGTCCTTATCCGCTGTATCAT 60.353 50.000 0.00 0.00 46.08 2.45
2700 5948 1.000607 GCGTCCTTATCCGCTGTATCA 60.001 52.381 0.00 0.00 46.08 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.