Multiple sequence alignment - TraesCS1A01G416700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G416700 chr1A 100.000 2438 0 0 1 2438 574939521 574937084 0.000000e+00 4503
1 TraesCS1A01G416700 chr1B 89.174 1090 56 26 529 1593 666827144 666826092 0.000000e+00 1303
2 TraesCS1A01G416700 chr1B 85.217 115 10 5 2137 2245 666825631 666825518 7.130000e-21 111
3 TraesCS1A01G416700 chr1B 79.762 168 10 8 1662 1829 666825939 666825796 1.540000e-17 100
4 TraesCS1A01G416700 chr1D 92.941 680 20 11 981 1656 478820076 478819421 0.000000e+00 965
5 TraesCS1A01G416700 chr1D 82.388 1005 108 36 14 982 478821089 478820118 0.000000e+00 811
6 TraesCS1A01G416700 chr3D 87.273 110 12 2 1696 1805 559944584 559944477 9.150000e-25 124


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G416700 chr1A 574937084 574939521 2437 True 4503.000000 4503 100.000000 1 2438 1 chr1A.!!$R1 2437
1 TraesCS1A01G416700 chr1B 666825518 666827144 1626 True 504.666667 1303 84.717667 529 2245 3 chr1B.!!$R1 1716
2 TraesCS1A01G416700 chr1D 478819421 478821089 1668 True 888.000000 965 87.664500 14 1656 2 chr1D.!!$R1 1642

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
667 698 0.39113 GTTCAGTAGGCGGCACATCA 60.391 55.0 13.08 0.0 0.0 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1649 1761 0.029834 CAGTGGGCGCAATTAGATGC 59.97 55.0 10.83 0.0 42.94 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 6.811954 TGTTTTGAACCCTTCTTTGAATACC 58.188 36.000 0.00 0.00 0.00 2.73
195 198 8.206867 TCACAATCATTTTTGGGAAACATACAA 58.793 29.630 0.00 0.00 36.12 2.41
285 306 8.938047 CATTTTTAAATGCCACAAACATTCTC 57.062 30.769 2.54 0.00 39.29 2.87
295 317 5.580297 GCCACAAACATTCTCTTTTGAAACA 59.420 36.000 1.25 0.00 36.41 2.83
296 318 6.258507 GCCACAAACATTCTCTTTTGAAACAT 59.741 34.615 1.25 0.00 36.41 2.71
297 319 7.437862 GCCACAAACATTCTCTTTTGAAACATA 59.562 33.333 1.25 0.00 36.41 2.29
299 321 8.971321 CACAAACATTCTCTTTTGAAACATAGG 58.029 33.333 1.25 0.00 36.41 2.57
300 322 8.695456 ACAAACATTCTCTTTTGAAACATAGGT 58.305 29.630 1.25 0.00 36.41 3.08
320 342 6.808008 AGGTATATTTCCATCAAATGCGAG 57.192 37.500 0.00 0.00 35.34 5.03
321 343 5.182001 AGGTATATTTCCATCAAATGCGAGC 59.818 40.000 0.00 0.00 35.34 5.03
326 348 2.646930 TCCATCAAATGCGAGCTTCAT 58.353 42.857 0.00 0.00 0.00 2.57
347 369 2.842208 TTTTGAGTGGCACGAAACAG 57.158 45.000 12.71 0.00 0.00 3.16
352 374 2.096819 TGAGTGGCACGAAACAGTTTTC 59.903 45.455 12.71 0.50 38.23 2.29
355 377 3.942748 AGTGGCACGAAACAGTTTTCTTA 59.057 39.130 12.71 0.00 39.29 2.10
356 378 4.033019 GTGGCACGAAACAGTTTTCTTAC 58.967 43.478 0.00 0.00 39.29 2.34
357 379 3.690139 TGGCACGAAACAGTTTTCTTACA 59.310 39.130 0.00 0.00 39.29 2.41
358 380 4.336993 TGGCACGAAACAGTTTTCTTACAT 59.663 37.500 0.00 0.00 39.29 2.29
360 382 6.038382 TGGCACGAAACAGTTTTCTTACATTA 59.962 34.615 0.00 0.00 39.29 1.90
361 383 6.358822 GGCACGAAACAGTTTTCTTACATTAC 59.641 38.462 0.00 0.00 39.29 1.89
362 384 6.084551 GCACGAAACAGTTTTCTTACATTACG 59.915 38.462 0.00 0.00 39.29 3.18
363 385 6.084551 CACGAAACAGTTTTCTTACATTACGC 59.915 38.462 0.00 0.00 39.29 4.42
364 386 5.277449 CGAAACAGTTTTCTTACATTACGCG 59.723 40.000 3.53 3.53 39.29 6.01
367 389 6.476243 ACAGTTTTCTTACATTACGCGAAT 57.524 33.333 15.93 5.44 0.00 3.34
369 391 8.193250 ACAGTTTTCTTACATTACGCGAATAT 57.807 30.769 15.93 0.00 0.00 1.28
370 392 8.662141 ACAGTTTTCTTACATTACGCGAATATT 58.338 29.630 15.93 0.00 0.00 1.28
460 482 8.858003 TTTTTGCATAGTCACGAACATTTTAA 57.142 26.923 0.00 0.00 0.00 1.52
497 519 8.796475 ACATTGTTTAGAAGATGTGCTAACAAT 58.204 29.630 0.00 0.00 40.46 2.71
498 520 9.282247 CATTGTTTAGAAGATGTGCTAACAATC 57.718 33.333 11.92 0.00 40.46 2.67
509 533 9.672673 AGATGTGCTAACAATCTTTATACTGTT 57.327 29.630 0.00 0.00 40.46 3.16
624 653 1.874231 CAGATGATGCCAGCATGAGAC 59.126 52.381 10.41 0.68 39.69 3.36
652 683 0.464036 AGCAGGACAAGTCACGTTCA 59.536 50.000 2.29 0.00 0.00 3.18
666 697 1.421410 CGTTCAGTAGGCGGCACATC 61.421 60.000 13.08 0.00 0.00 3.06
667 698 0.391130 GTTCAGTAGGCGGCACATCA 60.391 55.000 13.08 0.00 0.00 3.07
668 699 0.391130 TTCAGTAGGCGGCACATCAC 60.391 55.000 13.08 0.48 0.00 3.06
686 717 2.272146 CTAGCCGCACCCCAATGT 59.728 61.111 0.00 0.00 0.00 2.71
809 852 3.138283 CCATCACTCTCTAGACTCCTCCT 59.862 52.174 0.00 0.00 0.00 3.69
812 855 3.199071 TCACTCTCTAGACTCCTCCTCAC 59.801 52.174 0.00 0.00 0.00 3.51
841 884 0.805614 GCTCACGCACTCTCTAGACA 59.194 55.000 0.00 0.00 35.78 3.41
863 906 2.124983 CATCGCCACCTCACCCAG 60.125 66.667 0.00 0.00 0.00 4.45
916 972 3.184628 TCTCCCCCATCACATCCATATC 58.815 50.000 0.00 0.00 0.00 1.63
917 973 2.240667 CTCCCCCATCACATCCATATCC 59.759 54.545 0.00 0.00 0.00 2.59
918 974 2.157801 TCCCCCATCACATCCATATCCT 60.158 50.000 0.00 0.00 0.00 3.24
919 975 2.025605 CCCCCATCACATCCATATCCTG 60.026 54.545 0.00 0.00 0.00 3.86
920 976 2.914941 CCCCATCACATCCATATCCTGA 59.085 50.000 0.00 0.00 0.00 3.86
921 977 3.526430 CCCCATCACATCCATATCCTGAT 59.474 47.826 0.00 0.00 0.00 2.90
922 978 4.723285 CCCCATCACATCCATATCCTGATA 59.277 45.833 0.00 0.00 0.00 2.15
923 979 5.371769 CCCCATCACATCCATATCCTGATAT 59.628 44.000 0.00 0.00 34.50 1.63
945 1001 2.433145 CCACACAGCGCGACTCAT 60.433 61.111 12.10 0.00 0.00 2.90
983 1039 0.407528 ACAGGAGAGGAGAGCTCACA 59.592 55.000 17.77 0.00 34.07 3.58
984 1040 1.203112 ACAGGAGAGGAGAGCTCACAA 60.203 52.381 17.77 0.00 34.07 3.33
985 1041 1.477700 CAGGAGAGGAGAGCTCACAAG 59.522 57.143 17.77 0.00 34.07 3.16
987 1043 2.024080 AGGAGAGGAGAGCTCACAAGAT 60.024 50.000 17.77 0.00 34.07 2.40
1048 1148 2.032681 ACAAGGTGGCGGAGAAGC 59.967 61.111 0.00 0.00 0.00 3.86
1290 1390 1.287041 GCAACGACCCCAACTACGAC 61.287 60.000 0.00 0.00 0.00 4.34
1302 1405 1.031029 ACTACGACGAGGAGGAAGGC 61.031 60.000 0.00 0.00 34.15 4.35
1485 1588 3.493503 GTCGTGTTGATCTTCGTTTCCTT 59.506 43.478 0.00 0.00 0.00 3.36
1486 1589 3.493129 TCGTGTTGATCTTCGTTTCCTTG 59.507 43.478 0.00 0.00 0.00 3.61
1487 1590 3.555518 GTGTTGATCTTCGTTTCCTTGC 58.444 45.455 0.00 0.00 0.00 4.01
1488 1591 3.251004 GTGTTGATCTTCGTTTCCTTGCT 59.749 43.478 0.00 0.00 0.00 3.91
1508 1617 1.901833 TCTGTGCTCTGCTTACCATGA 59.098 47.619 0.00 0.00 0.00 3.07
1517 1626 3.752747 TCTGCTTACCATGAATGTGTGTG 59.247 43.478 0.00 0.00 0.00 3.82
1518 1627 3.485394 TGCTTACCATGAATGTGTGTGT 58.515 40.909 0.00 0.00 0.00 3.72
1519 1628 4.646572 TGCTTACCATGAATGTGTGTGTA 58.353 39.130 0.00 0.00 0.00 2.90
1521 1630 5.049060 TGCTTACCATGAATGTGTGTGTAAC 60.049 40.000 0.00 0.00 37.35 2.50
1569 1681 4.872691 GTGGATCAGTTAACCTCTGTCATG 59.127 45.833 0.88 0.00 34.86 3.07
1611 1723 4.490706 TCTGTCAGATCATCATCATCCCT 58.509 43.478 0.00 0.00 0.00 4.20
1614 1726 4.657039 TGTCAGATCATCATCATCCCTTGA 59.343 41.667 0.00 0.00 39.12 3.02
1633 1745 6.108687 CCTTGATGTTAGCTTATGTGTCAGA 58.891 40.000 0.00 0.00 0.00 3.27
1649 1761 4.153835 GTGTCAGAAGCTTTCCTCTGATTG 59.846 45.833 16.75 0.00 40.69 2.67
1651 1763 3.079578 CAGAAGCTTTCCTCTGATTGCA 58.920 45.455 7.26 0.00 32.38 4.08
1656 1768 5.108187 AGCTTTCCTCTGATTGCATCTAA 57.892 39.130 0.00 0.00 0.00 2.10
1657 1769 5.692928 AGCTTTCCTCTGATTGCATCTAAT 58.307 37.500 0.00 0.00 0.00 1.73
1658 1770 6.127793 AGCTTTCCTCTGATTGCATCTAATT 58.872 36.000 0.00 0.00 0.00 1.40
1659 1771 6.039493 AGCTTTCCTCTGATTGCATCTAATTG 59.961 38.462 0.00 0.00 0.00 2.32
1660 1772 5.762825 TTCCTCTGATTGCATCTAATTGC 57.237 39.130 0.00 0.00 43.07 3.56
1670 1904 1.331756 CATCTAATTGCGCCCACTGTC 59.668 52.381 4.18 0.00 0.00 3.51
1687 1921 2.483106 CTGTCAGCACAAACCTCTCATG 59.517 50.000 0.00 0.00 29.82 3.07
1688 1922 2.158769 TGTCAGCACAAACCTCTCATGT 60.159 45.455 0.00 0.00 0.00 3.21
1689 1923 3.070878 TGTCAGCACAAACCTCTCATGTA 59.929 43.478 0.00 0.00 0.00 2.29
1690 1924 3.433615 GTCAGCACAAACCTCTCATGTAC 59.566 47.826 0.00 0.00 0.00 2.90
1691 1925 3.324846 TCAGCACAAACCTCTCATGTACT 59.675 43.478 0.00 0.00 0.00 2.73
1692 1926 3.681897 CAGCACAAACCTCTCATGTACTC 59.318 47.826 0.00 0.00 0.00 2.59
1693 1927 3.003480 GCACAAACCTCTCATGTACTCC 58.997 50.000 0.00 0.00 0.00 3.85
1694 1928 3.254060 CACAAACCTCTCATGTACTCCG 58.746 50.000 0.00 0.00 0.00 4.63
1701 1935 4.158025 ACCTCTCATGTACTCCGTAACAAG 59.842 45.833 0.00 0.00 0.00 3.16
1702 1936 4.106029 TCTCATGTACTCCGTAACAAGC 57.894 45.455 0.00 0.00 0.00 4.01
1705 1939 4.242475 TCATGTACTCCGTAACAAGCAAG 58.758 43.478 0.00 0.00 0.00 4.01
1708 1942 2.185004 ACTCCGTAACAAGCAAGCAT 57.815 45.000 0.00 0.00 0.00 3.79
1713 1947 3.000041 CCGTAACAAGCAAGCATAGTCA 59.000 45.455 0.00 0.00 0.00 3.41
1724 1958 4.442073 GCAAGCATAGTCAAAACACAAGTG 59.558 41.667 0.00 0.00 0.00 3.16
1728 1962 5.470098 AGCATAGTCAAAACACAAGTGTAGG 59.530 40.000 6.24 0.00 44.13 3.18
1748 1982 3.452627 AGGTGTGTCTGGGAATGAGATAC 59.547 47.826 0.00 0.00 33.44 2.24
1753 1987 5.939883 TGTGTCTGGGAATGAGATACTTTTG 59.060 40.000 0.00 0.00 33.84 2.44
1759 1993 6.778821 TGGGAATGAGATACTTTTGTTCAGA 58.221 36.000 0.00 0.00 0.00 3.27
1760 1994 7.230747 TGGGAATGAGATACTTTTGTTCAGAA 58.769 34.615 0.00 0.00 0.00 3.02
1761 1995 7.890127 TGGGAATGAGATACTTTTGTTCAGAAT 59.110 33.333 0.00 0.00 0.00 2.40
1762 1996 8.743714 GGGAATGAGATACTTTTGTTCAGAATT 58.256 33.333 0.00 0.00 0.00 2.17
1767 2001 9.119418 TGAGATACTTTTGTTCAGAATTTCACA 57.881 29.630 0.00 0.00 0.00 3.58
1770 2004 9.346725 GATACTTTTGTTCAGAATTTCACATCC 57.653 33.333 0.00 0.00 0.00 3.51
1771 2005 7.111247 ACTTTTGTTCAGAATTTCACATCCA 57.889 32.000 0.00 0.00 0.00 3.41
1772 2006 6.980397 ACTTTTGTTCAGAATTTCACATCCAC 59.020 34.615 0.00 0.00 0.00 4.02
1773 2007 6.462552 TTTGTTCAGAATTTCACATCCACA 57.537 33.333 0.00 0.00 0.00 4.17
1774 2008 5.694231 TGTTCAGAATTTCACATCCACAG 57.306 39.130 0.00 0.00 0.00 3.66
1815 2049 4.384056 CTTAACCATATCCACAGAGGCAG 58.616 47.826 0.00 0.00 37.29 4.85
1838 2081 2.894126 ACACGGTCAGAGTTCTCTTCAT 59.106 45.455 0.00 0.00 0.00 2.57
1839 2082 3.057174 ACACGGTCAGAGTTCTCTTCATC 60.057 47.826 0.00 0.00 0.00 2.92
1843 2086 3.178267 GTCAGAGTTCTCTTCATCAGCG 58.822 50.000 0.00 0.00 0.00 5.18
1844 2087 2.165234 TCAGAGTTCTCTTCATCAGCGG 59.835 50.000 0.00 0.00 0.00 5.52
1859 2102 0.249911 AGCGGTCGGGATAATTCAGC 60.250 55.000 0.00 0.00 0.00 4.26
1861 2104 0.944311 CGGTCGGGATAATTCAGCCG 60.944 60.000 0.00 0.00 31.37 5.52
1862 2105 0.602905 GGTCGGGATAATTCAGCCGG 60.603 60.000 0.00 0.00 31.37 6.13
1863 2106 1.070786 TCGGGATAATTCAGCCGGC 59.929 57.895 21.89 21.89 33.24 6.13
1864 2107 2.317609 CGGGATAATTCAGCCGGCG 61.318 63.158 23.20 16.49 31.37 6.46
1865 2108 1.227853 GGGATAATTCAGCCGGCGT 60.228 57.895 23.20 6.69 31.37 5.68
1866 2109 0.034337 GGGATAATTCAGCCGGCGTA 59.966 55.000 23.20 10.71 31.37 4.42
1867 2110 1.338769 GGGATAATTCAGCCGGCGTAT 60.339 52.381 23.20 13.02 31.37 3.06
1868 2111 2.423577 GGATAATTCAGCCGGCGTATT 58.576 47.619 23.20 22.15 0.00 1.89
1869 2112 2.415512 GGATAATTCAGCCGGCGTATTC 59.584 50.000 23.20 12.47 0.00 1.75
1870 2113 1.873698 TAATTCAGCCGGCGTATTCC 58.126 50.000 23.20 0.00 0.00 3.01
1871 2114 0.107410 AATTCAGCCGGCGTATTCCA 60.107 50.000 23.20 2.05 0.00 3.53
1872 2115 0.532862 ATTCAGCCGGCGTATTCCAG 60.533 55.000 23.20 4.86 0.00 3.86
1873 2116 1.895020 TTCAGCCGGCGTATTCCAGT 61.895 55.000 23.20 0.00 0.00 4.00
1874 2117 1.038681 TCAGCCGGCGTATTCCAGTA 61.039 55.000 23.20 0.00 0.00 2.74
1875 2118 0.874607 CAGCCGGCGTATTCCAGTAC 60.875 60.000 23.20 0.00 0.00 2.73
1876 2119 1.593479 GCCGGCGTATTCCAGTACC 60.593 63.158 12.58 0.00 0.00 3.34
1877 2120 1.817881 CCGGCGTATTCCAGTACCA 59.182 57.895 6.01 0.00 0.00 3.25
1878 2121 0.391597 CCGGCGTATTCCAGTACCAT 59.608 55.000 6.01 0.00 0.00 3.55
1879 2122 1.202604 CCGGCGTATTCCAGTACCATT 60.203 52.381 6.01 0.00 0.00 3.16
1880 2123 2.557317 CGGCGTATTCCAGTACCATTT 58.443 47.619 0.00 0.00 0.00 2.32
1881 2124 3.493002 CCGGCGTATTCCAGTACCATTTA 60.493 47.826 6.01 0.00 0.00 1.40
1882 2125 3.739300 CGGCGTATTCCAGTACCATTTAG 59.261 47.826 0.00 0.00 0.00 1.85
1883 2126 4.500205 CGGCGTATTCCAGTACCATTTAGA 60.500 45.833 0.00 0.00 0.00 2.10
1884 2127 4.989168 GGCGTATTCCAGTACCATTTAGAG 59.011 45.833 0.00 0.00 0.00 2.43
1885 2128 5.221382 GGCGTATTCCAGTACCATTTAGAGA 60.221 44.000 0.00 0.00 0.00 3.10
1886 2129 6.278363 GCGTATTCCAGTACCATTTAGAGAA 58.722 40.000 0.00 0.00 0.00 2.87
1887 2130 6.421202 GCGTATTCCAGTACCATTTAGAGAAG 59.579 42.308 0.00 0.00 0.00 2.85
1888 2131 7.683704 GCGTATTCCAGTACCATTTAGAGAAGA 60.684 40.741 0.00 0.00 0.00 2.87
1889 2132 8.195436 CGTATTCCAGTACCATTTAGAGAAGAA 58.805 37.037 0.00 0.00 0.00 2.52
1890 2133 9.535878 GTATTCCAGTACCATTTAGAGAAGAAG 57.464 37.037 0.00 0.00 0.00 2.85
1891 2134 5.978814 TCCAGTACCATTTAGAGAAGAAGC 58.021 41.667 0.00 0.00 0.00 3.86
1892 2135 4.806247 CCAGTACCATTTAGAGAAGAAGCG 59.194 45.833 0.00 0.00 0.00 4.68
1893 2136 5.394224 CCAGTACCATTTAGAGAAGAAGCGA 60.394 44.000 0.00 0.00 0.00 4.93
1894 2137 5.746245 CAGTACCATTTAGAGAAGAAGCGAG 59.254 44.000 0.00 0.00 0.00 5.03
1895 2138 5.652891 AGTACCATTTAGAGAAGAAGCGAGA 59.347 40.000 0.00 0.00 0.00 4.04
1896 2139 5.606348 ACCATTTAGAGAAGAAGCGAGAT 57.394 39.130 0.00 0.00 0.00 2.75
1897 2140 5.983540 ACCATTTAGAGAAGAAGCGAGATT 58.016 37.500 0.00 0.00 0.00 2.40
1898 2141 5.814705 ACCATTTAGAGAAGAAGCGAGATTG 59.185 40.000 0.00 0.00 0.00 2.67
1899 2142 5.236047 CCATTTAGAGAAGAAGCGAGATTGG 59.764 44.000 0.00 0.00 0.00 3.16
1900 2143 5.661056 TTTAGAGAAGAAGCGAGATTGGA 57.339 39.130 0.00 0.00 0.00 3.53
1901 2144 3.799281 AGAGAAGAAGCGAGATTGGAG 57.201 47.619 0.00 0.00 0.00 3.86
1902 2145 3.360867 AGAGAAGAAGCGAGATTGGAGA 58.639 45.455 0.00 0.00 0.00 3.71
1903 2146 3.960102 AGAGAAGAAGCGAGATTGGAGAT 59.040 43.478 0.00 0.00 0.00 2.75
1904 2147 4.405358 AGAGAAGAAGCGAGATTGGAGATT 59.595 41.667 0.00 0.00 0.00 2.40
1905 2148 5.596361 AGAGAAGAAGCGAGATTGGAGATTA 59.404 40.000 0.00 0.00 0.00 1.75
1906 2149 5.841810 AGAAGAAGCGAGATTGGAGATTAG 58.158 41.667 0.00 0.00 0.00 1.73
1907 2150 4.599047 AGAAGCGAGATTGGAGATTAGG 57.401 45.455 0.00 0.00 0.00 2.69
1908 2151 4.219115 AGAAGCGAGATTGGAGATTAGGA 58.781 43.478 0.00 0.00 0.00 2.94
1909 2152 4.280677 AGAAGCGAGATTGGAGATTAGGAG 59.719 45.833 0.00 0.00 0.00 3.69
1910 2153 3.571590 AGCGAGATTGGAGATTAGGAGT 58.428 45.455 0.00 0.00 0.00 3.85
1911 2154 3.572255 AGCGAGATTGGAGATTAGGAGTC 59.428 47.826 0.00 0.00 0.00 3.36
1912 2155 3.305744 GCGAGATTGGAGATTAGGAGTCC 60.306 52.174 0.00 0.00 0.00 3.85
1913 2156 3.057876 CGAGATTGGAGATTAGGAGTCCG 60.058 52.174 2.76 0.00 32.51 4.79
1914 2157 4.145807 GAGATTGGAGATTAGGAGTCCGA 58.854 47.826 2.76 0.00 32.51 4.55
1915 2158 4.148838 AGATTGGAGATTAGGAGTCCGAG 58.851 47.826 2.76 0.00 32.51 4.63
1916 2159 3.383698 TTGGAGATTAGGAGTCCGAGT 57.616 47.619 2.76 0.00 32.51 4.18
1917 2160 3.383698 TGGAGATTAGGAGTCCGAGTT 57.616 47.619 2.76 0.00 32.51 3.01
1918 2161 4.515028 TGGAGATTAGGAGTCCGAGTTA 57.485 45.455 2.76 0.00 32.51 2.24
1919 2162 4.462133 TGGAGATTAGGAGTCCGAGTTAG 58.538 47.826 2.76 0.00 32.51 2.34
1920 2163 4.165565 TGGAGATTAGGAGTCCGAGTTAGA 59.834 45.833 2.76 0.00 32.51 2.10
1921 2164 4.758165 GGAGATTAGGAGTCCGAGTTAGAG 59.242 50.000 2.76 0.00 0.00 2.43
1922 2165 4.721132 AGATTAGGAGTCCGAGTTAGAGG 58.279 47.826 2.76 0.00 0.00 3.69
1923 2166 3.294038 TTAGGAGTCCGAGTTAGAGGG 57.706 52.381 2.76 0.00 0.00 4.30
1924 2167 0.259356 AGGAGTCCGAGTTAGAGGGG 59.741 60.000 2.76 0.00 0.00 4.79
1925 2168 1.393487 GGAGTCCGAGTTAGAGGGGC 61.393 65.000 0.00 0.00 0.00 5.80
1926 2169 0.396001 GAGTCCGAGTTAGAGGGGCT 60.396 60.000 0.00 0.00 38.80 5.19
1927 2170 0.396001 AGTCCGAGTTAGAGGGGCTC 60.396 60.000 0.00 0.00 26.87 4.70
1931 2174 2.883572 GAGTTAGAGGGGCTCGACA 58.116 57.895 0.00 0.00 35.36 4.35
1932 2175 0.741915 GAGTTAGAGGGGCTCGACAG 59.258 60.000 0.00 0.00 35.36 3.51
1933 2176 0.331954 AGTTAGAGGGGCTCGACAGA 59.668 55.000 0.00 0.00 35.36 3.41
1934 2177 1.063567 AGTTAGAGGGGCTCGACAGAT 60.064 52.381 0.00 0.00 35.36 2.90
1935 2178 1.757699 GTTAGAGGGGCTCGACAGATT 59.242 52.381 0.00 0.00 35.36 2.40
1936 2179 1.693627 TAGAGGGGCTCGACAGATTC 58.306 55.000 0.00 0.00 35.36 2.52
1937 2180 1.045911 AGAGGGGCTCGACAGATTCC 61.046 60.000 0.00 0.00 35.36 3.01
1938 2181 1.306141 AGGGGCTCGACAGATTCCA 60.306 57.895 0.00 0.00 0.00 3.53
1939 2182 0.692419 AGGGGCTCGACAGATTCCAT 60.692 55.000 0.00 0.00 0.00 3.41
1940 2183 0.250081 GGGGCTCGACAGATTCCATC 60.250 60.000 0.00 0.00 0.00 3.51
1941 2184 0.755686 GGGCTCGACAGATTCCATCT 59.244 55.000 0.00 0.00 41.15 2.90
1942 2185 1.270041 GGGCTCGACAGATTCCATCTC 60.270 57.143 0.00 0.00 37.58 2.75
1943 2186 1.270041 GGCTCGACAGATTCCATCTCC 60.270 57.143 0.00 0.00 37.58 3.71
1944 2187 1.270041 GCTCGACAGATTCCATCTCCC 60.270 57.143 0.00 0.00 37.58 4.30
1945 2188 2.034878 CTCGACAGATTCCATCTCCCA 58.965 52.381 0.00 0.00 37.58 4.37
1946 2189 2.034878 TCGACAGATTCCATCTCCCAG 58.965 52.381 0.00 0.00 37.58 4.45
1947 2190 2.034878 CGACAGATTCCATCTCCCAGA 58.965 52.381 0.00 0.00 37.58 3.86
1948 2191 2.632028 CGACAGATTCCATCTCCCAGAT 59.368 50.000 0.00 0.00 37.58 2.90
1957 2200 2.780714 CATCTCCCAGATGCAGAATCC 58.219 52.381 0.61 0.00 44.69 3.01
1958 2201 1.135094 TCTCCCAGATGCAGAATCCC 58.865 55.000 0.00 0.00 35.72 3.85
1959 2202 0.841961 CTCCCAGATGCAGAATCCCA 59.158 55.000 0.00 0.00 35.72 4.37
1960 2203 1.213678 CTCCCAGATGCAGAATCCCAA 59.786 52.381 0.00 0.00 35.72 4.12
1961 2204 1.213678 TCCCAGATGCAGAATCCCAAG 59.786 52.381 0.00 0.00 35.72 3.61
1962 2205 1.688772 CCAGATGCAGAATCCCAAGG 58.311 55.000 0.00 0.00 35.72 3.61
1963 2206 1.688772 CAGATGCAGAATCCCAAGGG 58.311 55.000 0.00 0.00 35.72 3.95
1964 2207 0.554792 AGATGCAGAATCCCAAGGGG 59.445 55.000 5.08 0.00 46.11 4.79
1995 2238 0.924090 CAGCTCGCGGAGAAACATAC 59.076 55.000 6.13 0.00 0.00 2.39
1996 2239 0.525668 AGCTCGCGGAGAAACATACG 60.526 55.000 6.13 0.00 0.00 3.06
1997 2240 1.480219 GCTCGCGGAGAAACATACGG 61.480 60.000 6.13 0.00 0.00 4.02
1998 2241 0.870307 CTCGCGGAGAAACATACGGG 60.870 60.000 6.13 0.00 40.08 5.28
1999 2242 1.140161 CGCGGAGAAACATACGGGA 59.860 57.895 0.00 0.00 41.02 5.14
2000 2243 0.870307 CGCGGAGAAACATACGGGAG 60.870 60.000 0.00 0.00 41.02 4.30
2021 2264 2.256306 GGGGGATTTCAGCTTTTGGAA 58.744 47.619 0.00 0.00 0.00 3.53
2022 2265 2.234661 GGGGGATTTCAGCTTTTGGAAG 59.765 50.000 0.00 0.00 35.92 3.46
2023 2266 3.165071 GGGGATTTCAGCTTTTGGAAGA 58.835 45.455 0.00 0.00 34.71 2.87
2024 2267 3.194329 GGGGATTTCAGCTTTTGGAAGAG 59.806 47.826 0.00 0.00 34.71 2.85
2026 2269 3.194329 GGATTTCAGCTTTTGGAAGAGGG 59.806 47.826 0.00 0.00 34.71 4.30
2036 2294 5.104900 GCTTTTGGAAGAGGGTATAGACAGA 60.105 44.000 0.00 0.00 34.71 3.41
2040 2298 3.140519 GGAAGAGGGTATAGACAGAGGGA 59.859 52.174 0.00 0.00 0.00 4.20
2041 2299 4.387664 GGAAGAGGGTATAGACAGAGGGAA 60.388 50.000 0.00 0.00 0.00 3.97
2042 2300 4.901785 AGAGGGTATAGACAGAGGGAAA 57.098 45.455 0.00 0.00 0.00 3.13
2043 2301 5.222278 AGAGGGTATAGACAGAGGGAAAA 57.778 43.478 0.00 0.00 0.00 2.29
2056 2314 5.016245 ACAGAGGGAAAATGGGGAGAAATAA 59.984 40.000 0.00 0.00 0.00 1.40
2057 2315 5.595952 CAGAGGGAAAATGGGGAGAAATAAG 59.404 44.000 0.00 0.00 0.00 1.73
2058 2316 5.496168 AGAGGGAAAATGGGGAGAAATAAGA 59.504 40.000 0.00 0.00 0.00 2.10
2059 2317 6.010739 AGAGGGAAAATGGGGAGAAATAAGAA 60.011 38.462 0.00 0.00 0.00 2.52
2060 2318 6.570680 AGGGAAAATGGGGAGAAATAAGAAA 58.429 36.000 0.00 0.00 0.00 2.52
2061 2319 7.022496 AGGGAAAATGGGGAGAAATAAGAAAA 58.978 34.615 0.00 0.00 0.00 2.29
2075 2333 8.164070 AGAAATAAGAAAAGAGTCTTTAGGGCA 58.836 33.333 18.31 4.28 38.75 5.36
2080 2338 4.495690 AAAGAGTCTTTAGGGCATCTCC 57.504 45.455 16.60 0.00 0.00 3.71
2081 2339 3.121929 AGAGTCTTTAGGGCATCTCCA 57.878 47.619 0.00 0.00 36.21 3.86
2082 2340 3.454858 AGAGTCTTTAGGGCATCTCCAA 58.545 45.455 0.00 0.00 36.21 3.53
2083 2341 3.198853 AGAGTCTTTAGGGCATCTCCAAC 59.801 47.826 0.00 0.00 36.21 3.77
2084 2342 2.093447 AGTCTTTAGGGCATCTCCAACG 60.093 50.000 0.00 0.00 36.21 4.10
2086 2344 0.742990 TTTAGGGCATCTCCAACGCG 60.743 55.000 3.53 3.53 36.21 6.01
2087 2345 3.733344 TAGGGCATCTCCAACGCGC 62.733 63.158 5.73 0.00 38.75 6.86
2091 2349 4.505217 CATCTCCAACGCGCGCAC 62.505 66.667 32.58 2.05 0.00 5.34
2092 2350 4.742201 ATCTCCAACGCGCGCACT 62.742 61.111 32.58 14.67 0.00 4.40
2096 2354 4.306471 CCAACGCGCGCACTCAAA 62.306 61.111 32.58 0.00 0.00 2.69
2097 2355 3.085010 CAACGCGCGCACTCAAAC 61.085 61.111 32.58 0.00 0.00 2.93
2098 2356 4.307908 AACGCGCGCACTCAAACC 62.308 61.111 32.58 0.00 0.00 3.27
2101 2359 4.683334 GCGCGCACTCAAACCACC 62.683 66.667 29.10 0.00 0.00 4.61
2102 2360 4.368808 CGCGCACTCAAACCACCG 62.369 66.667 8.75 0.00 0.00 4.94
2103 2361 3.276846 GCGCACTCAAACCACCGT 61.277 61.111 0.30 0.00 0.00 4.83
2104 2362 2.935955 CGCACTCAAACCACCGTC 59.064 61.111 0.00 0.00 0.00 4.79
2105 2363 2.604174 CGCACTCAAACCACCGTCC 61.604 63.158 0.00 0.00 0.00 4.79
2106 2364 2.604174 GCACTCAAACCACCGTCCG 61.604 63.158 0.00 0.00 0.00 4.79
2107 2365 2.280592 ACTCAAACCACCGTCCGC 60.281 61.111 0.00 0.00 0.00 5.54
2108 2366 3.411351 CTCAAACCACCGTCCGCG 61.411 66.667 0.00 0.00 37.95 6.46
2109 2367 3.851845 CTCAAACCACCGTCCGCGA 62.852 63.158 8.23 0.00 41.33 5.87
2110 2368 2.740826 CAAACCACCGTCCGCGAT 60.741 61.111 8.23 0.00 41.33 4.58
2111 2369 2.433664 AAACCACCGTCCGCGATC 60.434 61.111 8.23 0.00 41.33 3.69
2112 2370 4.789075 AACCACCGTCCGCGATCG 62.789 66.667 11.69 11.69 41.33 3.69
2129 2387 4.148825 GGATGTCCGGACGCAGCT 62.149 66.667 28.70 11.24 0.00 4.24
2130 2388 2.125512 GATGTCCGGACGCAGCTT 60.126 61.111 28.70 9.62 0.00 3.74
2131 2389 1.141019 GATGTCCGGACGCAGCTTA 59.859 57.895 28.70 10.60 0.00 3.09
2132 2390 0.459585 GATGTCCGGACGCAGCTTAA 60.460 55.000 28.70 9.81 0.00 1.85
2133 2391 0.739813 ATGTCCGGACGCAGCTTAAC 60.740 55.000 28.70 2.70 0.00 2.01
2134 2392 2.126228 TCCGGACGCAGCTTAACG 60.126 61.111 0.00 0.00 0.00 3.18
2135 2393 2.126228 CCGGACGCAGCTTAACGA 60.126 61.111 0.00 0.00 0.00 3.85
2167 2425 5.610982 TCCCTGCCAAGATATTAAGTGGTAT 59.389 40.000 0.00 0.00 33.43 2.73
2170 2428 7.390718 CCCTGCCAAGATATTAAGTGGTATAAC 59.609 40.741 0.00 0.00 33.43 1.89
2171 2429 7.390718 CCTGCCAAGATATTAAGTGGTATAACC 59.609 40.741 0.00 0.00 39.22 2.85
2185 2447 6.549736 AGTGGTATAACCTCATTTTATTGCCC 59.450 38.462 0.00 0.00 39.58 5.36
2195 2457 5.732633 TCATTTTATTGCCCAAACAGATGG 58.267 37.500 0.00 0.00 40.35 3.51
2197 2459 1.484038 TATTGCCCAAACAGATGGCC 58.516 50.000 0.00 0.00 44.72 5.36
2204 2466 3.753815 CCCAAACAGATGGCCAAAATTT 58.246 40.909 10.96 5.62 39.26 1.82
2205 2467 4.805609 GCCCAAACAGATGGCCAAAATTTA 60.806 41.667 10.96 0.00 39.30 1.40
2206 2468 4.694982 CCCAAACAGATGGCCAAAATTTAC 59.305 41.667 10.96 0.00 39.26 2.01
2207 2469 5.303971 CCAAACAGATGGCCAAAATTTACA 58.696 37.500 10.96 0.00 32.78 2.41
2236 2499 8.738199 TTTTTCGTGTACACTTCTGTATCTAG 57.262 34.615 23.01 3.84 35.28 2.43
2266 2529 9.871238 TTATTTTCTATTCTGTTCTAGCTTCGT 57.129 29.630 0.00 0.00 0.00 3.85
2267 2530 7.582435 TTTTCTATTCTGTTCTAGCTTCGTG 57.418 36.000 0.00 0.00 0.00 4.35
2268 2531 5.899120 TCTATTCTGTTCTAGCTTCGTGT 57.101 39.130 0.00 0.00 0.00 4.49
2269 2532 6.997239 TCTATTCTGTTCTAGCTTCGTGTA 57.003 37.500 0.00 0.00 0.00 2.90
2270 2533 7.569639 TCTATTCTGTTCTAGCTTCGTGTAT 57.430 36.000 0.00 0.00 0.00 2.29
2271 2534 7.997482 TCTATTCTGTTCTAGCTTCGTGTATT 58.003 34.615 0.00 0.00 0.00 1.89
2272 2535 9.117183 TCTATTCTGTTCTAGCTTCGTGTATTA 57.883 33.333 0.00 0.00 0.00 0.98
2273 2536 9.900710 CTATTCTGTTCTAGCTTCGTGTATTAT 57.099 33.333 0.00 0.00 0.00 1.28
2274 2537 8.804688 ATTCTGTTCTAGCTTCGTGTATTATC 57.195 34.615 0.00 0.00 0.00 1.75
2275 2538 7.569639 TCTGTTCTAGCTTCGTGTATTATCT 57.430 36.000 0.00 0.00 0.00 1.98
2276 2539 7.997482 TCTGTTCTAGCTTCGTGTATTATCTT 58.003 34.615 0.00 0.00 0.00 2.40
2277 2540 7.915923 TCTGTTCTAGCTTCGTGTATTATCTTG 59.084 37.037 0.00 0.00 0.00 3.02
2278 2541 7.768240 TGTTCTAGCTTCGTGTATTATCTTGA 58.232 34.615 0.00 0.00 0.00 3.02
2279 2542 7.701078 TGTTCTAGCTTCGTGTATTATCTTGAC 59.299 37.037 0.00 0.00 0.00 3.18
2280 2543 7.569639 TCTAGCTTCGTGTATTATCTTGACT 57.430 36.000 0.00 0.00 0.00 3.41
2281 2544 7.418408 TCTAGCTTCGTGTATTATCTTGACTG 58.582 38.462 0.00 0.00 0.00 3.51
2282 2545 5.967088 AGCTTCGTGTATTATCTTGACTGT 58.033 37.500 0.00 0.00 0.00 3.55
2283 2546 6.398918 AGCTTCGTGTATTATCTTGACTGTT 58.601 36.000 0.00 0.00 0.00 3.16
2284 2547 6.311445 AGCTTCGTGTATTATCTTGACTGTTG 59.689 38.462 0.00 0.00 0.00 3.33
2285 2548 6.403333 TTCGTGTATTATCTTGACTGTTGC 57.597 37.500 0.00 0.00 0.00 4.17
2286 2549 5.720202 TCGTGTATTATCTTGACTGTTGCT 58.280 37.500 0.00 0.00 0.00 3.91
2287 2550 6.859017 TCGTGTATTATCTTGACTGTTGCTA 58.141 36.000 0.00 0.00 0.00 3.49
2288 2551 7.489160 TCGTGTATTATCTTGACTGTTGCTAT 58.511 34.615 0.00 0.00 0.00 2.97
2289 2552 7.979537 TCGTGTATTATCTTGACTGTTGCTATT 59.020 33.333 0.00 0.00 0.00 1.73
2290 2553 8.604035 CGTGTATTATCTTGACTGTTGCTATTT 58.396 33.333 0.00 0.00 0.00 1.40
2291 2554 9.922305 GTGTATTATCTTGACTGTTGCTATTTC 57.078 33.333 0.00 0.00 0.00 2.17
2292 2555 9.890629 TGTATTATCTTGACTGTTGCTATTTCT 57.109 29.630 0.00 0.00 0.00 2.52
2298 2561 8.484641 TCTTGACTGTTGCTATTTCTATTCTG 57.515 34.615 0.00 0.00 0.00 3.02
2299 2562 8.097038 TCTTGACTGTTGCTATTTCTATTCTGT 58.903 33.333 0.00 0.00 0.00 3.41
2300 2563 8.621532 TTGACTGTTGCTATTTCTATTCTGTT 57.378 30.769 0.00 0.00 0.00 3.16
2301 2564 8.256611 TGACTGTTGCTATTTCTATTCTGTTC 57.743 34.615 0.00 0.00 0.00 3.18
2302 2565 7.334421 TGACTGTTGCTATTTCTATTCTGTTCC 59.666 37.037 0.00 0.00 0.00 3.62
2303 2566 7.168219 ACTGTTGCTATTTCTATTCTGTTCCA 58.832 34.615 0.00 0.00 0.00 3.53
2304 2567 7.831193 ACTGTTGCTATTTCTATTCTGTTCCAT 59.169 33.333 0.00 0.00 0.00 3.41
2305 2568 8.213518 TGTTGCTATTTCTATTCTGTTCCATC 57.786 34.615 0.00 0.00 0.00 3.51
2306 2569 7.828717 TGTTGCTATTTCTATTCTGTTCCATCA 59.171 33.333 0.00 0.00 0.00 3.07
2307 2570 8.844244 GTTGCTATTTCTATTCTGTTCCATCAT 58.156 33.333 0.00 0.00 0.00 2.45
2308 2571 8.613060 TGCTATTTCTATTCTGTTCCATCATC 57.387 34.615 0.00 0.00 0.00 2.92
2309 2572 7.663081 TGCTATTTCTATTCTGTTCCATCATCC 59.337 37.037 0.00 0.00 0.00 3.51
2310 2573 7.120432 GCTATTTCTATTCTGTTCCATCATCCC 59.880 40.741 0.00 0.00 0.00 3.85
2311 2574 4.982241 TCTATTCTGTTCCATCATCCCC 57.018 45.455 0.00 0.00 0.00 4.81
2312 2575 4.570926 TCTATTCTGTTCCATCATCCCCT 58.429 43.478 0.00 0.00 0.00 4.79
2313 2576 4.977739 TCTATTCTGTTCCATCATCCCCTT 59.022 41.667 0.00 0.00 0.00 3.95
2314 2577 4.614967 ATTCTGTTCCATCATCCCCTTT 57.385 40.909 0.00 0.00 0.00 3.11
2315 2578 3.370840 TCTGTTCCATCATCCCCTTTG 57.629 47.619 0.00 0.00 0.00 2.77
2316 2579 2.649312 TCTGTTCCATCATCCCCTTTGT 59.351 45.455 0.00 0.00 0.00 2.83
2317 2580 3.019564 CTGTTCCATCATCCCCTTTGTC 58.980 50.000 0.00 0.00 0.00 3.18
2318 2581 2.378208 TGTTCCATCATCCCCTTTGTCA 59.622 45.455 0.00 0.00 0.00 3.58
2319 2582 3.019564 GTTCCATCATCCCCTTTGTCAG 58.980 50.000 0.00 0.00 0.00 3.51
2320 2583 2.561187 TCCATCATCCCCTTTGTCAGA 58.439 47.619 0.00 0.00 0.00 3.27
2321 2584 2.239654 TCCATCATCCCCTTTGTCAGAC 59.760 50.000 0.00 0.00 0.00 3.51
2322 2585 2.648059 CATCATCCCCTTTGTCAGACC 58.352 52.381 0.00 0.00 0.00 3.85
2323 2586 1.741028 TCATCCCCTTTGTCAGACCA 58.259 50.000 0.00 0.00 0.00 4.02
2324 2587 2.278245 TCATCCCCTTTGTCAGACCAT 58.722 47.619 0.00 0.00 0.00 3.55
2325 2588 2.649312 TCATCCCCTTTGTCAGACCATT 59.351 45.455 0.00 0.00 0.00 3.16
2326 2589 2.879103 TCCCCTTTGTCAGACCATTC 57.121 50.000 0.00 0.00 0.00 2.67
2327 2590 2.061848 TCCCCTTTGTCAGACCATTCA 58.938 47.619 0.00 0.00 0.00 2.57
2328 2591 2.649312 TCCCCTTTGTCAGACCATTCAT 59.351 45.455 0.00 0.00 0.00 2.57
2329 2592 3.075882 TCCCCTTTGTCAGACCATTCATT 59.924 43.478 0.00 0.00 0.00 2.57
2330 2593 3.834231 CCCCTTTGTCAGACCATTCATTT 59.166 43.478 0.00 0.00 0.00 2.32
2331 2594 4.284234 CCCCTTTGTCAGACCATTCATTTT 59.716 41.667 0.00 0.00 0.00 1.82
2332 2595 5.473039 CCCTTTGTCAGACCATTCATTTTC 58.527 41.667 0.00 0.00 0.00 2.29
2333 2596 5.473039 CCTTTGTCAGACCATTCATTTTCC 58.527 41.667 0.00 0.00 0.00 3.13
2334 2597 5.010922 CCTTTGTCAGACCATTCATTTTCCA 59.989 40.000 0.00 0.00 0.00 3.53
2335 2598 6.295462 CCTTTGTCAGACCATTCATTTTCCAT 60.295 38.462 0.00 0.00 0.00 3.41
2336 2599 6.669125 TTGTCAGACCATTCATTTTCCATT 57.331 33.333 0.00 0.00 0.00 3.16
2337 2600 6.669125 TGTCAGACCATTCATTTTCCATTT 57.331 33.333 0.00 0.00 0.00 2.32
2338 2601 7.773489 TGTCAGACCATTCATTTTCCATTTA 57.227 32.000 0.00 0.00 0.00 1.40
2339 2602 8.365060 TGTCAGACCATTCATTTTCCATTTAT 57.635 30.769 0.00 0.00 0.00 1.40
2340 2603 8.469200 TGTCAGACCATTCATTTTCCATTTATC 58.531 33.333 0.00 0.00 0.00 1.75
2341 2604 7.922811 GTCAGACCATTCATTTTCCATTTATCC 59.077 37.037 0.00 0.00 0.00 2.59
2342 2605 7.618907 TCAGACCATTCATTTTCCATTTATCCA 59.381 33.333 0.00 0.00 0.00 3.41
2343 2606 8.426489 CAGACCATTCATTTTCCATTTATCCAT 58.574 33.333 0.00 0.00 0.00 3.41
2344 2607 8.645110 AGACCATTCATTTTCCATTTATCCATC 58.355 33.333 0.00 0.00 0.00 3.51
2345 2608 8.557304 ACCATTCATTTTCCATTTATCCATCT 57.443 30.769 0.00 0.00 0.00 2.90
2346 2609 8.645110 ACCATTCATTTTCCATTTATCCATCTC 58.355 33.333 0.00 0.00 0.00 2.75
2347 2610 7.811236 CCATTCATTTTCCATTTATCCATCTCG 59.189 37.037 0.00 0.00 0.00 4.04
2348 2611 6.882610 TCATTTTCCATTTATCCATCTCGG 57.117 37.500 0.00 0.00 0.00 4.63
2349 2612 5.241506 TCATTTTCCATTTATCCATCTCGGC 59.758 40.000 0.00 0.00 33.14 5.54
2350 2613 3.855255 TTCCATTTATCCATCTCGGCA 57.145 42.857 0.00 0.00 33.14 5.69
2351 2614 4.371624 TTCCATTTATCCATCTCGGCAT 57.628 40.909 0.00 0.00 33.14 4.40
2352 2615 3.942829 TCCATTTATCCATCTCGGCATC 58.057 45.455 0.00 0.00 33.14 3.91
2353 2616 3.584406 TCCATTTATCCATCTCGGCATCT 59.416 43.478 0.00 0.00 33.14 2.90
2354 2617 3.937706 CCATTTATCCATCTCGGCATCTC 59.062 47.826 0.00 0.00 33.14 2.75
2355 2618 4.564199 CCATTTATCCATCTCGGCATCTCA 60.564 45.833 0.00 0.00 33.14 3.27
2356 2619 4.897509 TTTATCCATCTCGGCATCTCAT 57.102 40.909 0.00 0.00 33.14 2.90
2357 2620 6.343703 CATTTATCCATCTCGGCATCTCATA 58.656 40.000 0.00 0.00 33.14 2.15
2358 2621 6.358974 TTTATCCATCTCGGCATCTCATAA 57.641 37.500 0.00 0.00 33.14 1.90
2359 2622 3.667497 TCCATCTCGGCATCTCATAAC 57.333 47.619 0.00 0.00 33.14 1.89
2360 2623 2.029918 TCCATCTCGGCATCTCATAACG 60.030 50.000 0.00 0.00 33.14 3.18
2361 2624 2.029918 CCATCTCGGCATCTCATAACGA 60.030 50.000 0.00 0.00 0.00 3.85
2362 2625 2.776312 TCTCGGCATCTCATAACGAC 57.224 50.000 0.00 0.00 0.00 4.34
2363 2626 2.021457 TCTCGGCATCTCATAACGACA 58.979 47.619 0.00 0.00 0.00 4.35
2364 2627 2.425668 TCTCGGCATCTCATAACGACAA 59.574 45.455 0.00 0.00 0.00 3.18
2365 2628 2.535984 CTCGGCATCTCATAACGACAAC 59.464 50.000 0.00 0.00 0.00 3.32
2366 2629 1.593006 CGGCATCTCATAACGACAACC 59.407 52.381 0.00 0.00 0.00 3.77
2367 2630 1.940613 GGCATCTCATAACGACAACCC 59.059 52.381 0.00 0.00 0.00 4.11
2368 2631 1.593006 GCATCTCATAACGACAACCCG 59.407 52.381 0.00 0.00 0.00 5.28
2369 2632 2.888594 CATCTCATAACGACAACCCGT 58.111 47.619 0.00 0.00 45.64 5.28
2370 2633 2.357327 TCTCATAACGACAACCCGTG 57.643 50.000 0.00 0.00 42.54 4.94
2371 2634 1.067425 TCTCATAACGACAACCCGTGG 60.067 52.381 0.00 0.00 42.54 4.94
2372 2635 0.967662 TCATAACGACAACCCGTGGA 59.032 50.000 0.00 0.00 42.54 4.02
2373 2636 1.343789 TCATAACGACAACCCGTGGAA 59.656 47.619 0.00 0.00 42.54 3.53
2374 2637 2.144730 CATAACGACAACCCGTGGAAA 58.855 47.619 0.00 0.00 42.54 3.13
2375 2638 2.322355 TAACGACAACCCGTGGAAAA 57.678 45.000 0.00 0.00 42.54 2.29
2376 2639 1.461559 AACGACAACCCGTGGAAAAA 58.538 45.000 0.00 0.00 42.54 1.94
2395 2658 5.843019 AAAAACTCCTCCTGATGACCTAA 57.157 39.130 0.00 0.00 0.00 2.69
2396 2659 5.843019 AAAACTCCTCCTGATGACCTAAA 57.157 39.130 0.00 0.00 0.00 1.85
2397 2660 6.394345 AAAACTCCTCCTGATGACCTAAAT 57.606 37.500 0.00 0.00 0.00 1.40
2398 2661 5.365021 AACTCCTCCTGATGACCTAAATG 57.635 43.478 0.00 0.00 0.00 2.32
2399 2662 4.366267 ACTCCTCCTGATGACCTAAATGT 58.634 43.478 0.00 0.00 0.00 2.71
2400 2663 4.407296 ACTCCTCCTGATGACCTAAATGTC 59.593 45.833 0.00 0.00 35.77 3.06
2411 2674 6.854496 TGACCTAAATGTCACAGTAACAAC 57.146 37.500 0.00 0.00 40.22 3.32
2412 2675 6.350103 TGACCTAAATGTCACAGTAACAACA 58.650 36.000 0.00 0.00 40.22 3.33
2413 2676 6.824196 TGACCTAAATGTCACAGTAACAACAA 59.176 34.615 0.00 0.00 40.22 2.83
2414 2677 7.023197 ACCTAAATGTCACAGTAACAACAAC 57.977 36.000 0.00 0.00 0.00 3.32
2415 2678 6.600032 ACCTAAATGTCACAGTAACAACAACA 59.400 34.615 0.00 0.00 0.00 3.33
2416 2679 7.121463 ACCTAAATGTCACAGTAACAACAACAA 59.879 33.333 0.00 0.00 0.00 2.83
2417 2680 7.431084 CCTAAATGTCACAGTAACAACAACAAC 59.569 37.037 0.00 0.00 0.00 3.32
2418 2681 5.888691 ATGTCACAGTAACAACAACAACA 57.111 34.783 0.00 0.00 0.00 3.33
2419 2682 5.690997 TGTCACAGTAACAACAACAACAA 57.309 34.783 0.00 0.00 0.00 2.83
2420 2683 5.453648 TGTCACAGTAACAACAACAACAAC 58.546 37.500 0.00 0.00 0.00 3.32
2421 2684 5.008712 TGTCACAGTAACAACAACAACAACA 59.991 36.000 0.00 0.00 0.00 3.33
2422 2685 5.915758 GTCACAGTAACAACAACAACAACAA 59.084 36.000 0.00 0.00 0.00 2.83
2423 2686 5.915758 TCACAGTAACAACAACAACAACAAC 59.084 36.000 0.00 0.00 0.00 3.32
2424 2687 5.687730 CACAGTAACAACAACAACAACAACA 59.312 36.000 0.00 0.00 0.00 3.33
2425 2688 6.199154 CACAGTAACAACAACAACAACAACAA 59.801 34.615 0.00 0.00 0.00 2.83
2426 2689 6.199342 ACAGTAACAACAACAACAACAACAAC 59.801 34.615 0.00 0.00 0.00 3.32
2427 2690 6.199154 CAGTAACAACAACAACAACAACAACA 59.801 34.615 0.00 0.00 0.00 3.33
2428 2691 6.757010 AGTAACAACAACAACAACAACAACAA 59.243 30.769 0.00 0.00 0.00 2.83
2429 2692 5.649602 ACAACAACAACAACAACAACAAG 57.350 34.783 0.00 0.00 0.00 3.16
2430 2693 5.112686 ACAACAACAACAACAACAACAAGT 58.887 33.333 0.00 0.00 0.00 3.16
2431 2694 6.273825 ACAACAACAACAACAACAACAAGTA 58.726 32.000 0.00 0.00 0.00 2.24
2432 2695 6.757010 ACAACAACAACAACAACAACAAGTAA 59.243 30.769 0.00 0.00 0.00 2.24
2433 2696 7.277981 ACAACAACAACAACAACAACAAGTAAA 59.722 29.630 0.00 0.00 0.00 2.01
2434 2697 7.954788 ACAACAACAACAACAACAAGTAAAT 57.045 28.000 0.00 0.00 0.00 1.40
2435 2698 7.791949 ACAACAACAACAACAACAAGTAAATG 58.208 30.769 0.00 0.00 0.00 2.32
2436 2699 6.959671 ACAACAACAACAACAAGTAAATGG 57.040 33.333 0.00 0.00 0.00 3.16
2437 2700 6.692486 ACAACAACAACAACAAGTAAATGGA 58.308 32.000 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.889873 TTCAAAGAAGGGTTCAAAACATCTA 57.110 32.000 0.00 0.00 0.00 1.98
38 39 7.598869 GGTATTCAAAGAAGGGTTCAAAACATC 59.401 37.037 0.00 0.00 0.00 3.06
43 44 5.538433 CCAGGTATTCAAAGAAGGGTTCAAA 59.462 40.000 0.00 0.00 0.00 2.69
50 51 7.703058 AATGTTACCAGGTATTCAAAGAAGG 57.297 36.000 0.00 0.00 0.00 3.46
83 84 6.151312 TGCCATTTAAATAATGTACCACGTGT 59.849 34.615 15.65 5.35 0.00 4.49
84 85 6.556212 TGCCATTTAAATAATGTACCACGTG 58.444 36.000 9.08 9.08 0.00 4.49
85 86 6.761099 TGCCATTTAAATAATGTACCACGT 57.239 33.333 0.00 0.00 0.00 4.49
86 87 9.393249 CTATTGCCATTTAAATAATGTACCACG 57.607 33.333 0.00 0.00 0.00 4.94
114 116 9.695884 AAATGTTTGCGTAGTTTTACAAAAATG 57.304 25.926 0.00 0.00 31.85 2.32
159 162 8.411683 CCCAAAAATGATTGTGAAAATTCCAAA 58.588 29.630 2.64 0.00 0.00 3.28
163 166 9.449550 GTTTCCCAAAAATGATTGTGAAAATTC 57.550 29.630 3.93 0.00 38.04 2.17
169 172 7.730084 TGTATGTTTCCCAAAAATGATTGTGA 58.270 30.769 0.00 0.00 0.00 3.58
246 249 8.878769 GCATTTAAAAATGTTATGTACAAGGGG 58.121 33.333 14.98 0.00 45.77 4.79
247 250 8.878769 GGCATTTAAAAATGTTATGTACAAGGG 58.121 33.333 14.98 0.00 45.77 3.95
270 291 4.998671 TCAAAAGAGAATGTTTGTGGCA 57.001 36.364 0.00 0.00 36.36 4.92
295 317 7.066284 GCTCGCATTTGATGGAAATATACCTAT 59.934 37.037 0.00 0.00 32.65 2.57
296 318 6.371548 GCTCGCATTTGATGGAAATATACCTA 59.628 38.462 0.00 0.00 32.65 3.08
297 319 5.182001 GCTCGCATTTGATGGAAATATACCT 59.818 40.000 0.00 0.00 32.65 3.08
299 321 6.246420 AGCTCGCATTTGATGGAAATATAC 57.754 37.500 0.00 0.00 32.65 1.47
300 322 6.486320 TGAAGCTCGCATTTGATGGAAATATA 59.514 34.615 0.00 0.00 32.65 0.86
303 325 3.444742 TGAAGCTCGCATTTGATGGAAAT 59.555 39.130 0.00 0.00 34.34 2.17
331 353 1.745232 AAACTGTTTCGTGCCACTCA 58.255 45.000 0.00 0.00 0.00 3.41
336 358 4.281525 TGTAAGAAAACTGTTTCGTGCC 57.718 40.909 6.20 0.00 46.56 5.01
340 362 5.277449 CGCGTAATGTAAGAAAACTGTTTCG 59.723 40.000 6.20 3.15 46.56 3.46
342 364 6.289745 TCGCGTAATGTAAGAAAACTGTTT 57.710 33.333 5.77 0.00 0.00 2.83
343 365 5.910637 TCGCGTAATGTAAGAAAACTGTT 57.089 34.783 5.77 0.00 0.00 3.16
345 367 9.485591 AAATATTCGCGTAATGTAAGAAAACTG 57.514 29.630 5.77 0.00 0.00 3.16
355 377 9.997482 AATGTAAAGAAAATATTCGCGTAATGT 57.003 25.926 5.77 0.20 40.63 2.71
357 379 9.997482 ACAATGTAAAGAAAATATTCGCGTAAT 57.003 25.926 5.77 7.50 40.63 1.89
439 461 8.132362 ACTTTTTAAAATGTTCGTGACTATGCA 58.868 29.630 12.38 0.00 0.00 3.96
440 462 8.502161 ACTTTTTAAAATGTTCGTGACTATGC 57.498 30.769 12.38 0.00 0.00 3.14
470 492 8.840833 TGTTAGCACATCTTCTAAACAATGTA 57.159 30.769 0.00 0.00 31.40 2.29
624 653 1.002888 ACTTGTCCTGCTGATCTGTGG 59.997 52.381 1.27 4.77 0.00 4.17
652 683 0.686441 TAGGTGATGTGCCGCCTACT 60.686 55.000 0.00 0.00 44.61 2.57
666 697 3.344137 ATTGGGGTGCGGCTAGGTG 62.344 63.158 0.00 0.00 0.00 4.00
667 698 3.015145 ATTGGGGTGCGGCTAGGT 61.015 61.111 0.00 0.00 0.00 3.08
668 699 2.516930 CATTGGGGTGCGGCTAGG 60.517 66.667 0.00 0.00 0.00 3.02
686 717 1.731613 GTGACGCGACATTCACCGA 60.732 57.895 15.93 0.00 36.85 4.69
694 729 0.179148 AATATGCTCGTGACGCGACA 60.179 50.000 15.93 11.23 45.68 4.35
733 769 4.509737 GGGCGCGAGGACTGGTAC 62.510 72.222 12.10 0.00 0.00 3.34
754 797 1.025812 CGGAAGGCGACATCTAGAGT 58.974 55.000 0.00 0.00 0.00 3.24
809 852 2.525629 TGAGCGGTGGAAGGGTGA 60.526 61.111 0.00 0.00 0.00 4.02
841 884 2.284625 TGAGGTGGCGATGGAGGT 60.285 61.111 0.00 0.00 0.00 3.85
916 972 1.475751 GCTGTGTGGGTGGATATCAGG 60.476 57.143 4.83 0.00 0.00 3.86
917 973 1.807755 CGCTGTGTGGGTGGATATCAG 60.808 57.143 4.83 0.00 0.00 2.90
918 974 0.177836 CGCTGTGTGGGTGGATATCA 59.822 55.000 4.83 0.00 0.00 2.15
919 975 1.160329 GCGCTGTGTGGGTGGATATC 61.160 60.000 0.00 0.00 0.00 1.63
920 976 1.153168 GCGCTGTGTGGGTGGATAT 60.153 57.895 0.00 0.00 0.00 1.63
921 977 2.267642 GCGCTGTGTGGGTGGATA 59.732 61.111 0.00 0.00 0.00 2.59
945 1001 4.196193 CTGTTGTTGTTGGTCTGGAACTA 58.804 43.478 0.00 0.00 0.00 2.24
983 1039 1.605710 GCATGTGCGCCATCTTATCTT 59.394 47.619 4.18 0.00 0.00 2.40
984 1040 1.233019 GCATGTGCGCCATCTTATCT 58.767 50.000 4.18 0.00 0.00 1.98
985 1041 3.761481 GCATGTGCGCCATCTTATC 57.239 52.632 4.18 0.00 0.00 1.75
1230 1330 3.800863 TCGAGCTCGCTGTCGACC 61.801 66.667 30.97 0.00 40.19 4.79
1324 1427 2.995574 CCCGACGACCACCTCCTT 60.996 66.667 0.00 0.00 0.00 3.36
1419 1522 1.079819 CTACTGCTGGTGGTCGTGG 60.080 63.158 0.00 0.00 0.00 4.94
1444 1547 4.627114 CACACGCACGCACACGAC 62.627 66.667 0.00 0.00 43.93 4.34
1486 1589 0.036952 TGGTAAGCAGAGCACAGAGC 60.037 55.000 0.00 0.00 46.19 4.09
1487 1590 2.093816 TCATGGTAAGCAGAGCACAGAG 60.094 50.000 0.00 0.00 0.00 3.35
1488 1591 1.901833 TCATGGTAAGCAGAGCACAGA 59.098 47.619 0.00 0.00 0.00 3.41
1518 1627 9.990360 TCCACGCTTGATTATTATCTATTGTTA 57.010 29.630 0.00 0.00 0.00 2.41
1519 1628 8.902540 TCCACGCTTGATTATTATCTATTGTT 57.097 30.769 0.00 0.00 0.00 2.83
1521 1630 8.993121 ACTTCCACGCTTGATTATTATCTATTG 58.007 33.333 0.00 0.00 0.00 1.90
1524 1633 6.929049 CCACTTCCACGCTTGATTATTATCTA 59.071 38.462 0.00 0.00 0.00 1.98
1569 1681 2.725221 AGAAACCAGAGGGATGCATC 57.275 50.000 18.81 18.81 38.05 3.91
1611 1723 6.092670 GCTTCTGACACATAAGCTAACATCAA 59.907 38.462 12.34 0.00 39.43 2.57
1614 1726 5.738909 AGCTTCTGACACATAAGCTAACAT 58.261 37.500 18.00 0.62 46.76 2.71
1620 1732 4.006319 AGGAAAGCTTCTGACACATAAGC 58.994 43.478 0.00 11.88 41.69 3.09
1649 1761 0.029834 CAGTGGGCGCAATTAGATGC 59.970 55.000 10.83 0.00 42.94 3.91
1651 1763 1.065491 TGACAGTGGGCGCAATTAGAT 60.065 47.619 10.83 0.00 0.00 1.98
1656 1768 3.058160 GCTGACAGTGGGCGCAAT 61.058 61.111 10.83 0.00 0.00 3.56
1657 1769 4.560743 TGCTGACAGTGGGCGCAA 62.561 61.111 10.83 0.00 0.00 4.85
1660 1772 2.186160 TTTGTGCTGACAGTGGGCG 61.186 57.895 3.99 0.00 32.26 6.13
1670 1904 3.668447 AGTACATGAGAGGTTTGTGCTG 58.332 45.455 0.00 0.00 35.42 4.41
1687 1921 2.409975 TGCTTGCTTGTTACGGAGTAC 58.590 47.619 0.00 0.00 45.76 2.73
1688 1922 2.823924 TGCTTGCTTGTTACGGAGTA 57.176 45.000 0.00 0.00 45.11 2.59
1690 1924 3.262420 ACTATGCTTGCTTGTTACGGAG 58.738 45.455 0.00 0.00 0.00 4.63
1691 1925 3.259064 GACTATGCTTGCTTGTTACGGA 58.741 45.455 0.00 0.00 0.00 4.69
1692 1926 3.000041 TGACTATGCTTGCTTGTTACGG 59.000 45.455 0.00 0.00 0.00 4.02
1693 1927 4.661993 TTGACTATGCTTGCTTGTTACG 57.338 40.909 0.00 0.00 0.00 3.18
1694 1928 6.142320 GTGTTTTGACTATGCTTGCTTGTTAC 59.858 38.462 0.00 0.00 0.00 2.50
1701 1935 4.442073 CACTTGTGTTTTGACTATGCTTGC 59.558 41.667 0.00 0.00 0.00 4.01
1702 1936 5.581605 ACACTTGTGTTTTGACTATGCTTG 58.418 37.500 0.00 0.00 0.00 4.01
1705 1939 5.238650 ACCTACACTTGTGTTTTGACTATGC 59.761 40.000 11.80 0.00 0.00 3.14
1708 1942 5.583061 CACACCTACACTTGTGTTTTGACTA 59.417 40.000 11.80 0.00 42.82 2.59
1724 1958 2.832129 TCTCATTCCCAGACACACCTAC 59.168 50.000 0.00 0.00 0.00 3.18
1728 1962 4.744795 AGTATCTCATTCCCAGACACAC 57.255 45.455 0.00 0.00 0.00 3.82
1736 1970 7.687941 TTCTGAACAAAAGTATCTCATTCCC 57.312 36.000 0.00 0.00 0.00 3.97
1748 1982 6.979817 TGTGGATGTGAAATTCTGAACAAAAG 59.020 34.615 0.00 0.00 0.00 2.27
1753 1987 5.947228 TCTGTGGATGTGAAATTCTGAAC 57.053 39.130 0.00 0.00 0.00 3.18
1759 1993 5.388654 AGACCTTTCTGTGGATGTGAAATT 58.611 37.500 0.00 0.00 0.00 1.82
1760 1994 4.990526 AGACCTTTCTGTGGATGTGAAAT 58.009 39.130 0.00 0.00 0.00 2.17
1761 1995 4.103153 AGAGACCTTTCTGTGGATGTGAAA 59.897 41.667 0.00 0.00 29.47 2.69
1762 1996 3.648067 AGAGACCTTTCTGTGGATGTGAA 59.352 43.478 0.00 0.00 29.47 3.18
1763 1997 3.242867 AGAGACCTTTCTGTGGATGTGA 58.757 45.455 0.00 0.00 29.47 3.58
1764 1998 3.594134 GAGAGACCTTTCTGTGGATGTG 58.406 50.000 0.00 0.00 29.47 3.21
1765 1999 2.569404 GGAGAGACCTTTCTGTGGATGT 59.431 50.000 0.00 0.00 35.41 3.06
1766 2000 3.258971 GGAGAGACCTTTCTGTGGATG 57.741 52.381 0.00 0.00 35.41 3.51
1815 2049 0.315568 AGAGAACTCTGACCGTGTGC 59.684 55.000 3.39 0.00 38.75 4.57
1838 2081 1.068588 CTGAATTATCCCGACCGCTGA 59.931 52.381 0.00 0.00 0.00 4.26
1839 2082 1.502231 CTGAATTATCCCGACCGCTG 58.498 55.000 0.00 0.00 0.00 5.18
1843 2086 0.602905 CCGGCTGAATTATCCCGACC 60.603 60.000 10.64 0.00 43.20 4.79
1844 2087 1.228657 GCCGGCTGAATTATCCCGAC 61.229 60.000 22.15 0.00 43.20 4.79
1859 2102 0.391597 ATGGTACTGGAATACGCCGG 59.608 55.000 0.00 0.00 40.29 6.13
1861 2104 4.952460 TCTAAATGGTACTGGAATACGCC 58.048 43.478 0.00 0.00 0.00 5.68
1862 2105 5.839621 TCTCTAAATGGTACTGGAATACGC 58.160 41.667 0.00 0.00 0.00 4.42
1863 2106 7.713750 TCTTCTCTAAATGGTACTGGAATACG 58.286 38.462 0.00 0.00 0.00 3.06
1864 2107 9.535878 CTTCTTCTCTAAATGGTACTGGAATAC 57.464 37.037 0.00 0.00 0.00 1.89
1865 2108 8.204836 GCTTCTTCTCTAAATGGTACTGGAATA 58.795 37.037 0.00 0.00 0.00 1.75
1866 2109 7.051000 GCTTCTTCTCTAAATGGTACTGGAAT 58.949 38.462 0.00 0.00 0.00 3.01
1867 2110 6.407202 GCTTCTTCTCTAAATGGTACTGGAA 58.593 40.000 0.00 0.00 0.00 3.53
1868 2111 5.394224 CGCTTCTTCTCTAAATGGTACTGGA 60.394 44.000 0.00 0.00 0.00 3.86
1869 2112 4.806247 CGCTTCTTCTCTAAATGGTACTGG 59.194 45.833 0.00 0.00 0.00 4.00
1870 2113 5.651530 TCGCTTCTTCTCTAAATGGTACTG 58.348 41.667 0.00 0.00 0.00 2.74
1871 2114 5.652891 TCTCGCTTCTTCTCTAAATGGTACT 59.347 40.000 0.00 0.00 0.00 2.73
1872 2115 5.892568 TCTCGCTTCTTCTCTAAATGGTAC 58.107 41.667 0.00 0.00 0.00 3.34
1873 2116 6.716934 ATCTCGCTTCTTCTCTAAATGGTA 57.283 37.500 0.00 0.00 0.00 3.25
1874 2117 5.606348 ATCTCGCTTCTTCTCTAAATGGT 57.394 39.130 0.00 0.00 0.00 3.55
1875 2118 5.236047 CCAATCTCGCTTCTTCTCTAAATGG 59.764 44.000 0.00 0.00 0.00 3.16
1876 2119 6.045318 TCCAATCTCGCTTCTTCTCTAAATG 58.955 40.000 0.00 0.00 0.00 2.32
1877 2120 6.097554 TCTCCAATCTCGCTTCTTCTCTAAAT 59.902 38.462 0.00 0.00 0.00 1.40
1878 2121 5.419155 TCTCCAATCTCGCTTCTTCTCTAAA 59.581 40.000 0.00 0.00 0.00 1.85
1879 2122 4.950475 TCTCCAATCTCGCTTCTTCTCTAA 59.050 41.667 0.00 0.00 0.00 2.10
1880 2123 4.527944 TCTCCAATCTCGCTTCTTCTCTA 58.472 43.478 0.00 0.00 0.00 2.43
1881 2124 3.360867 TCTCCAATCTCGCTTCTTCTCT 58.639 45.455 0.00 0.00 0.00 3.10
1882 2125 3.791973 TCTCCAATCTCGCTTCTTCTC 57.208 47.619 0.00 0.00 0.00 2.87
1883 2126 4.751767 AATCTCCAATCTCGCTTCTTCT 57.248 40.909 0.00 0.00 0.00 2.85
1884 2127 4.987912 CCTAATCTCCAATCTCGCTTCTTC 59.012 45.833 0.00 0.00 0.00 2.87
1885 2128 4.651503 TCCTAATCTCCAATCTCGCTTCTT 59.348 41.667 0.00 0.00 0.00 2.52
1886 2129 4.219115 TCCTAATCTCCAATCTCGCTTCT 58.781 43.478 0.00 0.00 0.00 2.85
1887 2130 4.038642 ACTCCTAATCTCCAATCTCGCTTC 59.961 45.833 0.00 0.00 0.00 3.86
1888 2131 3.964031 ACTCCTAATCTCCAATCTCGCTT 59.036 43.478 0.00 0.00 0.00 4.68
1889 2132 3.571590 ACTCCTAATCTCCAATCTCGCT 58.428 45.455 0.00 0.00 0.00 4.93
1890 2133 3.305744 GGACTCCTAATCTCCAATCTCGC 60.306 52.174 0.00 0.00 0.00 5.03
1891 2134 3.057876 CGGACTCCTAATCTCCAATCTCG 60.058 52.174 0.00 0.00 0.00 4.04
1892 2135 4.145807 TCGGACTCCTAATCTCCAATCTC 58.854 47.826 0.00 0.00 0.00 2.75
1893 2136 4.148838 CTCGGACTCCTAATCTCCAATCT 58.851 47.826 0.00 0.00 0.00 2.40
1894 2137 3.892588 ACTCGGACTCCTAATCTCCAATC 59.107 47.826 0.00 0.00 0.00 2.67
1895 2138 3.917300 ACTCGGACTCCTAATCTCCAAT 58.083 45.455 0.00 0.00 0.00 3.16
1896 2139 3.383698 ACTCGGACTCCTAATCTCCAA 57.616 47.619 0.00 0.00 0.00 3.53
1897 2140 3.383698 AACTCGGACTCCTAATCTCCA 57.616 47.619 0.00 0.00 0.00 3.86
1898 2141 4.716794 TCTAACTCGGACTCCTAATCTCC 58.283 47.826 0.00 0.00 0.00 3.71
1899 2142 4.758165 CCTCTAACTCGGACTCCTAATCTC 59.242 50.000 0.00 0.00 0.00 2.75
1900 2143 4.446600 CCCTCTAACTCGGACTCCTAATCT 60.447 50.000 0.00 0.00 0.00 2.40
1901 2144 3.822167 CCCTCTAACTCGGACTCCTAATC 59.178 52.174 0.00 0.00 0.00 1.75
1902 2145 3.436761 CCCCTCTAACTCGGACTCCTAAT 60.437 52.174 0.00 0.00 0.00 1.73
1903 2146 2.091994 CCCCTCTAACTCGGACTCCTAA 60.092 54.545 0.00 0.00 0.00 2.69
1904 2147 1.493871 CCCCTCTAACTCGGACTCCTA 59.506 57.143 0.00 0.00 0.00 2.94
1905 2148 0.259356 CCCCTCTAACTCGGACTCCT 59.741 60.000 0.00 0.00 0.00 3.69
1906 2149 1.393487 GCCCCTCTAACTCGGACTCC 61.393 65.000 0.00 0.00 0.00 3.85
1907 2150 0.396001 AGCCCCTCTAACTCGGACTC 60.396 60.000 0.00 0.00 0.00 3.36
1908 2151 0.396001 GAGCCCCTCTAACTCGGACT 60.396 60.000 0.00 0.00 0.00 3.85
1909 2152 2.117257 GAGCCCCTCTAACTCGGAC 58.883 63.158 0.00 0.00 0.00 4.79
1910 2153 4.680487 GAGCCCCTCTAACTCGGA 57.320 61.111 0.00 0.00 0.00 4.55
1913 2156 0.741915 CTGTCGAGCCCCTCTAACTC 59.258 60.000 0.00 0.00 0.00 3.01
1914 2157 0.331954 TCTGTCGAGCCCCTCTAACT 59.668 55.000 0.00 0.00 0.00 2.24
1915 2158 1.404843 ATCTGTCGAGCCCCTCTAAC 58.595 55.000 0.00 0.00 0.00 2.34
1916 2159 2.032620 GAATCTGTCGAGCCCCTCTAA 58.967 52.381 0.00 0.00 0.00 2.10
1917 2160 1.693627 GAATCTGTCGAGCCCCTCTA 58.306 55.000 0.00 0.00 0.00 2.43
1918 2161 1.045911 GGAATCTGTCGAGCCCCTCT 61.046 60.000 0.00 0.00 0.00 3.69
1919 2162 1.330655 TGGAATCTGTCGAGCCCCTC 61.331 60.000 0.00 0.00 0.00 4.30
1920 2163 0.692419 ATGGAATCTGTCGAGCCCCT 60.692 55.000 0.00 0.00 0.00 4.79
1921 2164 0.250081 GATGGAATCTGTCGAGCCCC 60.250 60.000 0.00 0.00 41.17 5.80
1922 2165 3.297391 GATGGAATCTGTCGAGCCC 57.703 57.895 0.00 0.00 41.17 5.19
1938 2181 1.704070 GGGATTCTGCATCTGGGAGAT 59.296 52.381 0.00 0.00 44.06 2.75
1939 2182 1.135094 GGGATTCTGCATCTGGGAGA 58.865 55.000 0.00 0.00 42.84 3.71
1940 2183 0.841961 TGGGATTCTGCATCTGGGAG 59.158 55.000 0.00 0.00 36.05 4.30
1941 2184 1.213678 CTTGGGATTCTGCATCTGGGA 59.786 52.381 0.00 0.00 31.67 4.37
1942 2185 1.688772 CTTGGGATTCTGCATCTGGG 58.311 55.000 0.00 0.00 31.67 4.45
1943 2186 1.688772 CCTTGGGATTCTGCATCTGG 58.311 55.000 0.00 0.00 31.67 3.86
1944 2187 1.688772 CCCTTGGGATTCTGCATCTG 58.311 55.000 0.00 0.00 31.67 2.90
1956 2199 2.042433 TGTGGTAATTTCTCCCCTTGGG 59.958 50.000 0.00 0.00 46.11 4.12
1957 2200 3.356290 CTGTGGTAATTTCTCCCCTTGG 58.644 50.000 0.00 0.00 0.00 3.61
1958 2201 2.755103 GCTGTGGTAATTTCTCCCCTTG 59.245 50.000 0.00 0.00 0.00 3.61
1959 2202 2.649816 AGCTGTGGTAATTTCTCCCCTT 59.350 45.455 0.00 0.00 0.00 3.95
1960 2203 2.239907 GAGCTGTGGTAATTTCTCCCCT 59.760 50.000 0.00 0.00 0.00 4.79
1961 2204 2.644676 GAGCTGTGGTAATTTCTCCCC 58.355 52.381 0.00 0.00 0.00 4.81
1962 2205 2.280628 CGAGCTGTGGTAATTTCTCCC 58.719 52.381 0.00 0.00 0.00 4.30
1963 2206 1.666189 GCGAGCTGTGGTAATTTCTCC 59.334 52.381 0.00 0.00 0.00 3.71
1964 2207 1.324736 CGCGAGCTGTGGTAATTTCTC 59.675 52.381 0.00 0.00 0.00 2.87
1965 2208 1.359848 CGCGAGCTGTGGTAATTTCT 58.640 50.000 0.00 0.00 0.00 2.52
1966 2209 0.373716 CCGCGAGCTGTGGTAATTTC 59.626 55.000 8.23 0.00 43.63 2.17
1967 2210 2.466867 CCGCGAGCTGTGGTAATTT 58.533 52.632 8.23 0.00 43.63 1.82
1968 2211 4.201951 CCGCGAGCTGTGGTAATT 57.798 55.556 8.23 0.00 43.63 1.40
2005 2248 3.829026 ACCCTCTTCCAAAAGCTGAAATC 59.171 43.478 0.00 0.00 32.18 2.17
2021 2264 4.901785 TTTCCCTCTGTCTATACCCTCT 57.098 45.455 0.00 0.00 0.00 3.69
2022 2265 5.221742 CCATTTTCCCTCTGTCTATACCCTC 60.222 48.000 0.00 0.00 0.00 4.30
2023 2266 4.660771 CCATTTTCCCTCTGTCTATACCCT 59.339 45.833 0.00 0.00 0.00 4.34
2024 2267 4.202472 CCCATTTTCCCTCTGTCTATACCC 60.202 50.000 0.00 0.00 0.00 3.69
2026 2269 4.658901 TCCCCATTTTCCCTCTGTCTATAC 59.341 45.833 0.00 0.00 0.00 1.47
2036 2294 5.813965 TCTTATTTCTCCCCATTTTCCCT 57.186 39.130 0.00 0.00 0.00 4.20
2040 2298 8.727100 ACTCTTTTCTTATTTCTCCCCATTTT 57.273 30.769 0.00 0.00 0.00 1.82
2041 2299 8.173412 AGACTCTTTTCTTATTTCTCCCCATTT 58.827 33.333 0.00 0.00 0.00 2.32
2042 2300 7.703755 AGACTCTTTTCTTATTTCTCCCCATT 58.296 34.615 0.00 0.00 0.00 3.16
2043 2301 7.277405 AGACTCTTTTCTTATTTCTCCCCAT 57.723 36.000 0.00 0.00 0.00 4.00
2056 2314 5.338789 GGAGATGCCCTAAAGACTCTTTTCT 60.339 44.000 9.33 5.30 0.00 2.52
2057 2315 4.878971 GGAGATGCCCTAAAGACTCTTTTC 59.121 45.833 9.33 0.68 0.00 2.29
2058 2316 4.289672 TGGAGATGCCCTAAAGACTCTTTT 59.710 41.667 9.33 0.00 34.97 2.27
2059 2317 3.846588 TGGAGATGCCCTAAAGACTCTTT 59.153 43.478 9.04 9.04 34.97 2.52
2060 2318 3.454858 TGGAGATGCCCTAAAGACTCTT 58.545 45.455 0.00 0.00 34.97 2.85
2061 2319 3.121929 TGGAGATGCCCTAAAGACTCT 57.878 47.619 0.00 0.00 34.97 3.24
2075 2333 4.742201 AGTGCGCGCGTTGGAGAT 62.742 61.111 32.35 7.81 0.00 2.75
2080 2338 3.085010 GTTTGAGTGCGCGCGTTG 61.085 61.111 32.35 3.57 0.00 4.10
2081 2339 4.307908 GGTTTGAGTGCGCGCGTT 62.308 61.111 32.35 17.39 0.00 4.84
2084 2342 4.683334 GGTGGTTTGAGTGCGCGC 62.683 66.667 27.26 27.26 0.00 6.86
2086 2344 3.236618 GACGGTGGTTTGAGTGCGC 62.237 63.158 0.00 0.00 0.00 6.09
2087 2345 2.604174 GGACGGTGGTTTGAGTGCG 61.604 63.158 0.00 0.00 0.00 5.34
2088 2346 2.604174 CGGACGGTGGTTTGAGTGC 61.604 63.158 0.00 0.00 0.00 4.40
2089 2347 2.604174 GCGGACGGTGGTTTGAGTG 61.604 63.158 0.00 0.00 0.00 3.51
2090 2348 2.280592 GCGGACGGTGGTTTGAGT 60.281 61.111 0.00 0.00 0.00 3.41
2091 2349 3.411351 CGCGGACGGTGGTTTGAG 61.411 66.667 0.00 0.00 34.97 3.02
2092 2350 3.229156 ATCGCGGACGGTGGTTTGA 62.229 57.895 6.13 0.00 40.63 2.69
2093 2351 2.736682 GATCGCGGACGGTGGTTTG 61.737 63.158 6.13 0.00 40.63 2.93
2094 2352 2.433664 GATCGCGGACGGTGGTTT 60.434 61.111 6.13 0.00 40.63 3.27
2095 2353 4.789075 CGATCGCGGACGGTGGTT 62.789 66.667 6.13 0.00 40.63 3.67
2112 2370 2.292794 TAAGCTGCGTCCGGACATCC 62.293 60.000 32.80 20.37 0.00 3.51
2113 2371 0.459585 TTAAGCTGCGTCCGGACATC 60.460 55.000 32.80 23.30 0.00 3.06
2114 2372 0.739813 GTTAAGCTGCGTCCGGACAT 60.740 55.000 32.80 14.00 0.00 3.06
2115 2373 1.373748 GTTAAGCTGCGTCCGGACA 60.374 57.895 32.80 14.84 0.00 4.02
2116 2374 2.442188 CGTTAAGCTGCGTCCGGAC 61.442 63.158 25.28 25.28 0.00 4.79
2117 2375 2.126228 CGTTAAGCTGCGTCCGGA 60.126 61.111 0.00 0.00 0.00 5.14
2118 2376 1.286354 TTTCGTTAAGCTGCGTCCGG 61.286 55.000 0.00 0.00 0.00 5.14
2119 2377 0.719465 ATTTCGTTAAGCTGCGTCCG 59.281 50.000 0.00 0.00 0.00 4.79
2120 2378 1.463444 ACATTTCGTTAAGCTGCGTCC 59.537 47.619 0.00 0.00 0.00 4.79
2121 2379 2.156891 TCACATTTCGTTAAGCTGCGTC 59.843 45.455 0.00 0.00 0.00 5.19
2122 2380 2.139917 TCACATTTCGTTAAGCTGCGT 58.860 42.857 0.00 0.00 0.00 5.24
2123 2381 2.873170 TCACATTTCGTTAAGCTGCG 57.127 45.000 0.00 0.00 0.00 5.18
2124 2382 3.487544 GGGATCACATTTCGTTAAGCTGC 60.488 47.826 0.00 0.00 0.00 5.25
2125 2383 3.941483 AGGGATCACATTTCGTTAAGCTG 59.059 43.478 0.00 0.00 0.00 4.24
2126 2384 3.941483 CAGGGATCACATTTCGTTAAGCT 59.059 43.478 0.00 0.00 0.00 3.74
2127 2385 3.487544 GCAGGGATCACATTTCGTTAAGC 60.488 47.826 0.00 0.00 0.00 3.09
2128 2386 3.065371 GGCAGGGATCACATTTCGTTAAG 59.935 47.826 0.00 0.00 0.00 1.85
2129 2387 3.013921 GGCAGGGATCACATTTCGTTAA 58.986 45.455 0.00 0.00 0.00 2.01
2130 2388 2.026729 TGGCAGGGATCACATTTCGTTA 60.027 45.455 0.00 0.00 0.00 3.18
2131 2389 1.271871 TGGCAGGGATCACATTTCGTT 60.272 47.619 0.00 0.00 0.00 3.85
2132 2390 0.327924 TGGCAGGGATCACATTTCGT 59.672 50.000 0.00 0.00 0.00 3.85
2133 2391 1.402968 CTTGGCAGGGATCACATTTCG 59.597 52.381 0.00 0.00 0.00 3.46
2134 2392 2.726821 TCTTGGCAGGGATCACATTTC 58.273 47.619 0.00 0.00 0.00 2.17
2135 2393 2.905415 TCTTGGCAGGGATCACATTT 57.095 45.000 0.00 0.00 0.00 2.32
2167 2425 6.495181 TCTGTTTGGGCAATAAAATGAGGTTA 59.505 34.615 0.00 0.00 0.00 2.85
2170 2428 5.404466 TCTGTTTGGGCAATAAAATGAGG 57.596 39.130 0.00 0.00 0.00 3.86
2171 2429 5.813672 CCATCTGTTTGGGCAATAAAATGAG 59.186 40.000 0.00 0.00 32.80 2.90
2175 2433 3.936564 GCCATCTGTTTGGGCAATAAAA 58.063 40.909 0.00 0.00 46.92 1.52
2185 2447 8.721019 ATATGTAAATTTTGGCCATCTGTTTG 57.279 30.769 6.09 0.00 0.00 2.93
2245 2508 6.268825 ACACGAAGCTAGAACAGAATAGAA 57.731 37.500 0.00 0.00 0.00 2.10
2246 2509 5.899120 ACACGAAGCTAGAACAGAATAGA 57.101 39.130 0.00 0.00 0.00 1.98
2247 2510 9.900710 ATAATACACGAAGCTAGAACAGAATAG 57.099 33.333 0.00 0.00 0.00 1.73
2248 2511 9.894783 GATAATACACGAAGCTAGAACAGAATA 57.105 33.333 0.00 0.00 0.00 1.75
2249 2512 8.634444 AGATAATACACGAAGCTAGAACAGAAT 58.366 33.333 0.00 0.00 0.00 2.40
2250 2513 7.997482 AGATAATACACGAAGCTAGAACAGAA 58.003 34.615 0.00 0.00 0.00 3.02
2251 2514 7.569639 AGATAATACACGAAGCTAGAACAGA 57.430 36.000 0.00 0.00 0.00 3.41
2252 2515 7.915923 TCAAGATAATACACGAAGCTAGAACAG 59.084 37.037 0.00 0.00 0.00 3.16
2253 2516 7.701078 GTCAAGATAATACACGAAGCTAGAACA 59.299 37.037 0.00 0.00 0.00 3.18
2254 2517 7.916450 AGTCAAGATAATACACGAAGCTAGAAC 59.084 37.037 0.00 0.00 0.00 3.01
2255 2518 7.915923 CAGTCAAGATAATACACGAAGCTAGAA 59.084 37.037 0.00 0.00 0.00 2.10
2256 2519 7.067129 ACAGTCAAGATAATACACGAAGCTAGA 59.933 37.037 0.00 0.00 0.00 2.43
2257 2520 7.197017 ACAGTCAAGATAATACACGAAGCTAG 58.803 38.462 0.00 0.00 0.00 3.42
2258 2521 7.096884 ACAGTCAAGATAATACACGAAGCTA 57.903 36.000 0.00 0.00 0.00 3.32
2259 2522 5.967088 ACAGTCAAGATAATACACGAAGCT 58.033 37.500 0.00 0.00 0.00 3.74
2260 2523 6.470160 CAACAGTCAAGATAATACACGAAGC 58.530 40.000 0.00 0.00 0.00 3.86
2261 2524 6.311445 AGCAACAGTCAAGATAATACACGAAG 59.689 38.462 0.00 0.00 0.00 3.79
2262 2525 6.163476 AGCAACAGTCAAGATAATACACGAA 58.837 36.000 0.00 0.00 0.00 3.85
2263 2526 5.720202 AGCAACAGTCAAGATAATACACGA 58.280 37.500 0.00 0.00 0.00 4.35
2264 2527 7.700322 ATAGCAACAGTCAAGATAATACACG 57.300 36.000 0.00 0.00 0.00 4.49
2265 2528 9.922305 GAAATAGCAACAGTCAAGATAATACAC 57.078 33.333 0.00 0.00 0.00 2.90
2266 2529 9.890629 AGAAATAGCAACAGTCAAGATAATACA 57.109 29.630 0.00 0.00 0.00 2.29
2272 2535 9.107177 CAGAATAGAAATAGCAACAGTCAAGAT 57.893 33.333 0.00 0.00 0.00 2.40
2273 2536 8.097038 ACAGAATAGAAATAGCAACAGTCAAGA 58.903 33.333 0.00 0.00 0.00 3.02
2274 2537 8.261492 ACAGAATAGAAATAGCAACAGTCAAG 57.739 34.615 0.00 0.00 0.00 3.02
2275 2538 8.621532 AACAGAATAGAAATAGCAACAGTCAA 57.378 30.769 0.00 0.00 0.00 3.18
2276 2539 7.334421 GGAACAGAATAGAAATAGCAACAGTCA 59.666 37.037 0.00 0.00 0.00 3.41
2277 2540 7.334421 TGGAACAGAATAGAAATAGCAACAGTC 59.666 37.037 0.00 0.00 0.00 3.51
2278 2541 7.168219 TGGAACAGAATAGAAATAGCAACAGT 58.832 34.615 0.00 0.00 0.00 3.55
2279 2542 7.615582 TGGAACAGAATAGAAATAGCAACAG 57.384 36.000 0.00 0.00 0.00 3.16
2298 2561 3.019564 CTGACAAAGGGGATGATGGAAC 58.980 50.000 0.00 0.00 0.00 3.62
2299 2562 2.918934 TCTGACAAAGGGGATGATGGAA 59.081 45.455 0.00 0.00 0.00 3.53
2300 2563 2.239654 GTCTGACAAAGGGGATGATGGA 59.760 50.000 2.24 0.00 0.00 3.41
2301 2564 2.648059 GTCTGACAAAGGGGATGATGG 58.352 52.381 2.24 0.00 0.00 3.51
2302 2565 2.025981 TGGTCTGACAAAGGGGATGATG 60.026 50.000 10.38 0.00 0.00 3.07
2303 2566 2.278245 TGGTCTGACAAAGGGGATGAT 58.722 47.619 10.38 0.00 0.00 2.45
2304 2567 1.741028 TGGTCTGACAAAGGGGATGA 58.259 50.000 10.38 0.00 0.00 2.92
2305 2568 2.814805 ATGGTCTGACAAAGGGGATG 57.185 50.000 10.38 0.00 0.00 3.51
2306 2569 2.649312 TGAATGGTCTGACAAAGGGGAT 59.351 45.455 10.38 0.00 0.00 3.85
2307 2570 2.061848 TGAATGGTCTGACAAAGGGGA 58.938 47.619 10.38 0.00 0.00 4.81
2308 2571 2.584835 TGAATGGTCTGACAAAGGGG 57.415 50.000 10.38 0.00 0.00 4.79
2309 2572 5.473039 GAAAATGAATGGTCTGACAAAGGG 58.527 41.667 10.38 0.00 0.00 3.95
2310 2573 5.010922 TGGAAAATGAATGGTCTGACAAAGG 59.989 40.000 10.38 0.00 0.00 3.11
2311 2574 6.088016 TGGAAAATGAATGGTCTGACAAAG 57.912 37.500 10.38 0.00 0.00 2.77
2312 2575 6.669125 ATGGAAAATGAATGGTCTGACAAA 57.331 33.333 10.38 0.00 0.00 2.83
2313 2576 6.669125 AATGGAAAATGAATGGTCTGACAA 57.331 33.333 10.38 0.00 0.00 3.18
2314 2577 6.669125 AAATGGAAAATGAATGGTCTGACA 57.331 33.333 10.38 0.00 0.00 3.58
2315 2578 7.922811 GGATAAATGGAAAATGAATGGTCTGAC 59.077 37.037 0.00 0.00 0.00 3.51
2316 2579 7.618907 TGGATAAATGGAAAATGAATGGTCTGA 59.381 33.333 0.00 0.00 0.00 3.27
2317 2580 7.784037 TGGATAAATGGAAAATGAATGGTCTG 58.216 34.615 0.00 0.00 0.00 3.51
2318 2581 7.976414 TGGATAAATGGAAAATGAATGGTCT 57.024 32.000 0.00 0.00 0.00 3.85
2319 2582 8.645110 AGATGGATAAATGGAAAATGAATGGTC 58.355 33.333 0.00 0.00 0.00 4.02
2320 2583 8.557304 AGATGGATAAATGGAAAATGAATGGT 57.443 30.769 0.00 0.00 0.00 3.55
2321 2584 7.811236 CGAGATGGATAAATGGAAAATGAATGG 59.189 37.037 0.00 0.00 0.00 3.16
2322 2585 7.811236 CCGAGATGGATAAATGGAAAATGAATG 59.189 37.037 0.00 0.00 42.00 2.67
2323 2586 7.524367 GCCGAGATGGATAAATGGAAAATGAAT 60.524 37.037 0.00 0.00 42.00 2.57
2324 2587 6.239008 GCCGAGATGGATAAATGGAAAATGAA 60.239 38.462 0.00 0.00 42.00 2.57
2325 2588 5.241506 GCCGAGATGGATAAATGGAAAATGA 59.758 40.000 0.00 0.00 42.00 2.57
2326 2589 5.009911 TGCCGAGATGGATAAATGGAAAATG 59.990 40.000 0.00 0.00 42.00 2.32
2327 2590 5.139727 TGCCGAGATGGATAAATGGAAAAT 58.860 37.500 0.00 0.00 42.00 1.82
2328 2591 4.531854 TGCCGAGATGGATAAATGGAAAA 58.468 39.130 0.00 0.00 42.00 2.29
2329 2592 4.163441 TGCCGAGATGGATAAATGGAAA 57.837 40.909 0.00 0.00 42.00 3.13
2330 2593 3.855255 TGCCGAGATGGATAAATGGAA 57.145 42.857 0.00 0.00 42.00 3.53
2331 2594 3.584406 AGATGCCGAGATGGATAAATGGA 59.416 43.478 0.00 0.00 42.00 3.41
2332 2595 3.937706 GAGATGCCGAGATGGATAAATGG 59.062 47.826 0.00 0.00 42.00 3.16
2333 2596 4.572909 TGAGATGCCGAGATGGATAAATG 58.427 43.478 0.00 0.00 42.00 2.32
2334 2597 4.897509 TGAGATGCCGAGATGGATAAAT 57.102 40.909 0.00 0.00 42.00 1.40
2335 2598 4.897509 ATGAGATGCCGAGATGGATAAA 57.102 40.909 0.00 0.00 42.00 1.40
2336 2599 5.622233 CGTTATGAGATGCCGAGATGGATAA 60.622 44.000 0.00 0.00 42.00 1.75
2337 2600 4.142381 CGTTATGAGATGCCGAGATGGATA 60.142 45.833 0.00 0.00 42.00 2.59
2338 2601 3.367806 CGTTATGAGATGCCGAGATGGAT 60.368 47.826 0.00 0.00 42.00 3.41
2339 2602 2.029918 CGTTATGAGATGCCGAGATGGA 60.030 50.000 0.00 0.00 42.00 3.41
2340 2603 2.029918 TCGTTATGAGATGCCGAGATGG 60.030 50.000 0.00 0.00 42.50 3.51
2341 2604 2.983136 GTCGTTATGAGATGCCGAGATG 59.017 50.000 0.00 0.00 0.00 2.90
2342 2605 2.623416 TGTCGTTATGAGATGCCGAGAT 59.377 45.455 0.00 0.00 0.00 2.75
2343 2606 2.021457 TGTCGTTATGAGATGCCGAGA 58.979 47.619 0.00 0.00 0.00 4.04
2344 2607 2.492019 TGTCGTTATGAGATGCCGAG 57.508 50.000 0.00 0.00 0.00 4.63
2345 2608 2.536365 GTTGTCGTTATGAGATGCCGA 58.464 47.619 0.00 0.00 0.00 5.54
2346 2609 1.593006 GGTTGTCGTTATGAGATGCCG 59.407 52.381 0.00 0.00 0.00 5.69
2347 2610 1.940613 GGGTTGTCGTTATGAGATGCC 59.059 52.381 0.00 0.00 0.00 4.40
2348 2611 1.593006 CGGGTTGTCGTTATGAGATGC 59.407 52.381 0.00 0.00 0.00 3.91
2349 2612 2.603110 CACGGGTTGTCGTTATGAGATG 59.397 50.000 0.00 0.00 41.86 2.90
2350 2613 2.418197 CCACGGGTTGTCGTTATGAGAT 60.418 50.000 0.00 0.00 41.86 2.75
2351 2614 1.067425 CCACGGGTTGTCGTTATGAGA 60.067 52.381 0.00 0.00 41.86 3.27
2352 2615 1.067425 TCCACGGGTTGTCGTTATGAG 60.067 52.381 0.00 0.00 41.86 2.90
2353 2616 0.967662 TCCACGGGTTGTCGTTATGA 59.032 50.000 0.00 0.00 41.86 2.15
2354 2617 1.798283 TTCCACGGGTTGTCGTTATG 58.202 50.000 0.00 0.00 41.86 1.90
2355 2618 2.547299 TTTCCACGGGTTGTCGTTAT 57.453 45.000 0.00 0.00 41.86 1.89
2356 2619 2.322355 TTTTCCACGGGTTGTCGTTA 57.678 45.000 0.00 0.00 41.86 3.18
2357 2620 1.461559 TTTTTCCACGGGTTGTCGTT 58.538 45.000 0.00 0.00 41.86 3.85
2358 2621 3.171949 TTTTTCCACGGGTTGTCGT 57.828 47.368 0.00 0.00 44.91 4.34
2373 2636 5.843019 TTAGGTCATCAGGAGGAGTTTTT 57.157 39.130 0.00 0.00 0.00 1.94
2374 2637 5.843019 TTTAGGTCATCAGGAGGAGTTTT 57.157 39.130 0.00 0.00 0.00 2.43
2375 2638 5.251700 ACATTTAGGTCATCAGGAGGAGTTT 59.748 40.000 0.00 0.00 0.00 2.66
2376 2639 4.785376 ACATTTAGGTCATCAGGAGGAGTT 59.215 41.667 0.00 0.00 0.00 3.01
2377 2640 4.366267 ACATTTAGGTCATCAGGAGGAGT 58.634 43.478 0.00 0.00 0.00 3.85
2378 2641 4.406972 TGACATTTAGGTCATCAGGAGGAG 59.593 45.833 0.00 0.00 42.56 3.69
2379 2642 4.361783 TGACATTTAGGTCATCAGGAGGA 58.638 43.478 0.00 0.00 42.56 3.71
2380 2643 4.760530 TGACATTTAGGTCATCAGGAGG 57.239 45.455 0.00 0.00 42.56 4.30
2388 2651 6.350103 TGTTGTTACTGTGACATTTAGGTCA 58.650 36.000 6.22 0.00 45.06 4.02
2389 2652 6.854496 TGTTGTTACTGTGACATTTAGGTC 57.146 37.500 6.22 0.00 38.29 3.85
2390 2653 6.600032 TGTTGTTGTTACTGTGACATTTAGGT 59.400 34.615 6.22 0.00 0.00 3.08
2391 2654 7.022055 TGTTGTTGTTACTGTGACATTTAGG 57.978 36.000 6.22 0.00 0.00 2.69
2392 2655 7.965655 TGTTGTTGTTGTTACTGTGACATTTAG 59.034 33.333 6.22 0.00 0.00 1.85
2393 2656 7.817641 TGTTGTTGTTGTTACTGTGACATTTA 58.182 30.769 6.22 0.00 0.00 1.40
2394 2657 6.682746 TGTTGTTGTTGTTACTGTGACATTT 58.317 32.000 6.22 0.00 0.00 2.32
2395 2658 6.260870 TGTTGTTGTTGTTACTGTGACATT 57.739 33.333 6.22 0.00 0.00 2.71
2396 2659 5.888691 TGTTGTTGTTGTTACTGTGACAT 57.111 34.783 6.22 0.00 0.00 3.06
2397 2660 5.008712 TGTTGTTGTTGTTGTTACTGTGACA 59.991 36.000 0.78 0.78 0.00 3.58
2398 2661 5.453648 TGTTGTTGTTGTTGTTACTGTGAC 58.546 37.500 0.00 0.00 0.00 3.67
2399 2662 5.690997 TGTTGTTGTTGTTGTTACTGTGA 57.309 34.783 0.00 0.00 0.00 3.58
2400 2663 5.687730 TGTTGTTGTTGTTGTTGTTACTGTG 59.312 36.000 0.00 0.00 0.00 3.66
2401 2664 5.833082 TGTTGTTGTTGTTGTTGTTACTGT 58.167 33.333 0.00 0.00 0.00 3.55
2402 2665 6.199154 TGTTGTTGTTGTTGTTGTTGTTACTG 59.801 34.615 0.00 0.00 0.00 2.74
2403 2666 6.273825 TGTTGTTGTTGTTGTTGTTGTTACT 58.726 32.000 0.00 0.00 0.00 2.24
2404 2667 6.512177 TGTTGTTGTTGTTGTTGTTGTTAC 57.488 33.333 0.00 0.00 0.00 2.50
2405 2668 6.757010 ACTTGTTGTTGTTGTTGTTGTTGTTA 59.243 30.769 0.00 0.00 0.00 2.41
2406 2669 5.582665 ACTTGTTGTTGTTGTTGTTGTTGTT 59.417 32.000 0.00 0.00 0.00 2.83
2407 2670 5.112686 ACTTGTTGTTGTTGTTGTTGTTGT 58.887 33.333 0.00 0.00 0.00 3.32
2408 2671 5.649602 ACTTGTTGTTGTTGTTGTTGTTG 57.350 34.783 0.00 0.00 0.00 3.33
2409 2672 7.772332 TTTACTTGTTGTTGTTGTTGTTGTT 57.228 28.000 0.00 0.00 0.00 2.83
2410 2673 7.095439 CCATTTACTTGTTGTTGTTGTTGTTGT 60.095 33.333 0.00 0.00 0.00 3.32
2411 2674 7.116948 TCCATTTACTTGTTGTTGTTGTTGTTG 59.883 33.333 0.00 0.00 0.00 3.33
2412 2675 7.155328 TCCATTTACTTGTTGTTGTTGTTGTT 58.845 30.769 0.00 0.00 0.00 2.83
2413 2676 6.692486 TCCATTTACTTGTTGTTGTTGTTGT 58.308 32.000 0.00 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.