Multiple sequence alignment - TraesCS1A01G416000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G416000 chr1A 100.000 5449 0 0 1 5449 574645327 574639879 0.000000e+00 10063.0
1 TraesCS1A01G416000 chr1A 94.611 501 27 0 1 501 447163044 447163544 0.000000e+00 776.0
2 TraesCS1A01G416000 chr1D 92.840 3282 132 41 1323 4560 478361832 478358610 0.000000e+00 4663.0
3 TraesCS1A01G416000 chr1D 88.272 810 46 18 4584 5373 478358238 478357458 0.000000e+00 924.0
4 TraesCS1A01G416000 chr1D 89.161 286 20 3 928 1202 478362556 478362271 4.040000e-91 346.0
5 TraesCS1A01G416000 chr1D 93.548 62 3 1 462 523 225552711 225552651 2.090000e-14 91.6
6 TraesCS1A01G416000 chr1B 93.546 2851 109 26 1739 4560 666259666 666256862 0.000000e+00 4176.0
7 TraesCS1A01G416000 chr1B 93.094 362 19 4 842 1197 666260534 666260173 4.840000e-145 525.0
8 TraesCS1A01G416000 chr1B 87.613 331 26 5 1323 1641 666260133 666259806 2.400000e-98 370.0
9 TraesCS1A01G416000 chr1B 94.660 206 11 0 5180 5385 666256684 666256479 2.450000e-83 320.0
10 TraesCS1A01G416000 chr1B 86.842 228 18 3 972 1196 615996317 615996535 1.520000e-60 244.0
11 TraesCS1A01G416000 chr1B 93.548 155 8 2 4408 4560 663565173 663565019 4.250000e-56 230.0
12 TraesCS1A01G416000 chr1B 92.553 94 7 0 1037 1130 670658852 670658759 9.520000e-28 135.0
13 TraesCS1A01G416000 chr1B 94.521 73 3 1 4558 4629 666256765 666256693 1.600000e-20 111.0
14 TraesCS1A01G416000 chr1B 86.667 75 8 2 472 546 687094465 687094393 1.260000e-11 82.4
15 TraesCS1A01G416000 chr2A 95.761 519 22 0 1 519 589750290 589749772 0.000000e+00 837.0
16 TraesCS1A01G416000 chr2A 95.420 262 9 1 4299 4560 606237518 606237260 1.090000e-111 414.0
17 TraesCS1A01G416000 chr7A 95.135 370 18 0 1 370 251251447 251251816 7.870000e-163 584.0
18 TraesCS1A01G416000 chr7A 89.604 404 26 4 1 401 625611491 625611101 2.930000e-137 499.0
19 TraesCS1A01G416000 chr7A 92.593 270 17 1 4291 4560 623776092 623775826 8.560000e-103 385.0
20 TraesCS1A01G416000 chr7A 90.288 278 19 4 4291 4560 623742057 623741780 1.870000e-94 357.0
21 TraesCS1A01G416000 chr7A 89.247 186 19 1 5188 5372 102096865 102096680 1.180000e-56 231.0
22 TraesCS1A01G416000 chr7A 95.070 142 7 0 382 523 625611090 625610949 1.980000e-54 224.0
23 TraesCS1A01G416000 chr7A 95.082 122 6 0 403 524 251253194 251253315 5.570000e-45 193.0
24 TraesCS1A01G416000 chr7A 84.615 91 14 0 4115 4205 623742291 623742201 2.090000e-14 91.6
25 TraesCS1A01G416000 chr7A 94.444 36 2 0 382 417 251251816 251251851 7.620000e-04 56.5
26 TraesCS1A01G416000 chr2D 90.727 399 36 1 87 485 621156501 621156898 1.040000e-146 531.0
27 TraesCS1A01G416000 chr7B 87.414 437 53 1 87 523 193306282 193305848 8.150000e-138 501.0
28 TraesCS1A01G416000 chr7B 88.710 186 20 1 5188 5372 54904375 54904560 5.490000e-55 226.0
29 TraesCS1A01G416000 chr4B 87.104 442 37 12 1213 1641 604266941 604267375 2.950000e-132 483.0
30 TraesCS1A01G416000 chr4B 90.476 252 21 1 972 1220 604266728 604266979 4.070000e-86 329.0
31 TraesCS1A01G416000 chr4B 93.229 192 7 4 1227 1417 592719338 592719152 1.490000e-70 278.0
32 TraesCS1A01G416000 chr4B 86.975 238 22 3 972 1206 592719545 592719314 5.410000e-65 259.0
33 TraesCS1A01G416000 chr4B 76.596 282 40 17 3740 4018 2002532 2002274 1.230000e-26 132.0
34 TraesCS1A01G416000 chr4B 92.500 80 6 0 1019 1098 519741726 519741805 1.240000e-21 115.0
35 TraesCS1A01G416000 chr3B 93.333 270 15 1 4291 4560 483421390 483421656 3.960000e-106 396.0
36 TraesCS1A01G416000 chr3B 92.090 177 14 0 5194 5370 759794791 759794615 3.260000e-62 250.0
37 TraesCS1A01G416000 chr3B 90.968 155 12 2 4408 4560 26977251 26977405 1.990000e-49 207.0
38 TraesCS1A01G416000 chr3B 91.566 83 7 0 4123 4205 483421163 483421245 1.240000e-21 115.0
39 TraesCS1A01G416000 chr3B 91.250 80 7 0 1019 1098 316008303 316008382 5.770000e-20 110.0
40 TraesCS1A01G416000 chr3B 85.714 70 7 2 4115 4184 789442308 789442374 2.720000e-08 71.3
41 TraesCS1A01G416000 chr3A 90.741 270 22 1 4291 4560 243663485 243663751 1.870000e-94 357.0
42 TraesCS1A01G416000 chr3A 86.813 91 12 0 4115 4205 243663251 243663341 9.660000e-18 102.0
43 TraesCS1A01G416000 chr5B 89.513 267 28 0 257 523 81198005 81197739 6.760000e-89 339.0
44 TraesCS1A01G416000 chr5B 90.503 179 16 1 87 265 81198645 81198468 9.120000e-58 235.0
45 TraesCS1A01G416000 chr5B 76.127 377 63 16 3646 4018 697099868 697099515 7.260000e-39 172.0
46 TraesCS1A01G416000 chr5B 84.932 73 11 0 4730 4802 458733961 458734033 2.110000e-09 75.0
47 TraesCS1A01G416000 chr6B 90.000 250 16 2 972 1218 648691520 648691277 1.140000e-81 315.0
48 TraesCS1A01G416000 chr6B 91.176 204 12 4 1215 1417 648691313 648691115 6.950000e-69 272.0
49 TraesCS1A01G416000 chr6B 76.241 282 41 17 3740 4018 13720932 13721190 5.730000e-25 126.0
50 TraesCS1A01G416000 chr6B 96.429 56 2 0 468 523 255067496 255067441 5.810000e-15 93.5
51 TraesCS1A01G416000 chr6D 89.831 59 6 0 4750 4808 133209802 133209744 5.850000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G416000 chr1A 574639879 574645327 5448 True 10063.000000 10063 100.0000 1 5449 1 chr1A.!!$R1 5448
1 TraesCS1A01G416000 chr1A 447163044 447163544 500 False 776.000000 776 94.6110 1 501 1 chr1A.!!$F1 500
2 TraesCS1A01G416000 chr1D 478357458 478362556 5098 True 1977.666667 4663 90.0910 928 5373 3 chr1D.!!$R2 4445
3 TraesCS1A01G416000 chr1B 666256479 666260534 4055 True 1100.400000 4176 92.6868 842 5385 5 chr1B.!!$R4 4543
4 TraesCS1A01G416000 chr2A 589749772 589750290 518 True 837.000000 837 95.7610 1 519 1 chr2A.!!$R1 518
5 TraesCS1A01G416000 chr7A 625610949 625611491 542 True 361.500000 499 92.3370 1 523 2 chr7A.!!$R4 522
6 TraesCS1A01G416000 chr7A 251251447 251253315 1868 False 277.833333 584 94.8870 1 524 3 chr7A.!!$F1 523
7 TraesCS1A01G416000 chr7A 623741780 623742291 511 True 224.300000 357 87.4515 4115 4560 2 chr7A.!!$R3 445
8 TraesCS1A01G416000 chr4B 604266728 604267375 647 False 406.000000 483 88.7900 972 1641 2 chr4B.!!$F2 669
9 TraesCS1A01G416000 chr3A 243663251 243663751 500 False 229.500000 357 88.7770 4115 4560 2 chr3A.!!$F1 445
10 TraesCS1A01G416000 chr5B 81197739 81198645 906 True 287.000000 339 90.0080 87 523 2 chr5B.!!$R2 436

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
670 2531 0.036388 ACACATAAGGGCAGACACGG 60.036 55.000 0.00 0.0 0.00 4.94 F
1285 3558 0.038159 CTCTTTCTTCCGCCGTCTGT 60.038 55.000 0.00 0.0 0.00 3.41 F
1286 3559 0.038526 TCTTTCTTCCGCCGTCTGTC 60.039 55.000 0.00 0.0 0.00 3.51 F
1287 3560 0.038159 CTTTCTTCCGCCGTCTGTCT 60.038 55.000 0.00 0.0 0.00 3.41 F
1313 3586 0.179124 CTGCTCAGCCGACTCTAACC 60.179 60.000 0.00 0.0 0.00 2.85 F
1538 3811 0.946221 CTGCTGTCGACCACCTTCAC 60.946 60.000 14.12 0.0 0.00 3.18 F
2093 4426 1.148310 CCTCAAGTACGTTGGCAGTG 58.852 55.000 0.00 0.0 36.71 3.66 F
3827 6185 1.447314 CCGGTCCTGTTTAGTCGGC 60.447 63.158 0.00 0.0 0.00 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1488 3761 1.891919 GTCAGCCACGACCTGCAAA 60.892 57.895 0.00 0.00 0.00 3.68 R
2919 5276 1.000233 CTTGCCACCATAAGCCCCA 60.000 57.895 0.00 0.00 0.00 4.96 R
3260 5617 2.156917 CTTGGTGAGCAGCTCATTTGA 58.843 47.619 27.86 13.21 42.73 2.69 R
3319 5676 1.322442 GGCAGCTCCACTTTGTTTCT 58.678 50.000 0.00 0.00 34.01 2.52 R
3423 5780 5.503683 GCAAGAAGCAGATTGTACAGCATAG 60.504 44.000 7.48 0.00 44.79 2.23 R
3674 6031 3.313526 ACAGTTCAGAACAAGATGTGCAC 59.686 43.478 15.85 10.75 0.00 4.57 R
3918 6276 0.179056 TCATTTAGGTAGGCAGGCGC 60.179 55.000 0.00 0.00 37.44 6.53 R
5394 8223 0.098376 CTGATCTTTGCTTCCGCTGC 59.902 55.000 0.00 0.00 36.97 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.554462 CAGCAGCTCGTTAGGCTATCTA 59.446 50.000 0.00 0.00 38.03 1.98
108 112 4.367023 CGCCTTCCCGACCGTGAA 62.367 66.667 0.00 0.00 0.00 3.18
300 774 2.100631 CGGCGGAGTGGATCAACAC 61.101 63.158 2.34 0.00 41.63 3.32
442 2303 3.399181 GGATCGTGGGTGCCTGGA 61.399 66.667 0.00 0.00 0.00 3.86
462 2323 2.265904 GGGTGGGTTTGACGAAGGC 61.266 63.158 0.00 0.00 0.00 4.35
463 2324 2.613506 GGTGGGTTTGACGAAGGCG 61.614 63.158 0.00 0.00 44.79 5.52
524 2385 3.202097 CACGGTTGCCACATACATATGA 58.798 45.455 10.38 0.00 37.15 2.15
525 2386 3.248363 CACGGTTGCCACATACATATGAG 59.752 47.826 10.38 1.42 37.15 2.90
526 2387 2.224079 CGGTTGCCACATACATATGAGC 59.776 50.000 10.38 8.37 37.15 4.26
527 2388 3.213506 GGTTGCCACATACATATGAGCA 58.786 45.455 10.38 13.62 41.25 4.26
528 2389 3.822735 GGTTGCCACATACATATGAGCAT 59.177 43.478 10.38 0.00 41.90 3.79
529 2390 5.003160 GGTTGCCACATACATATGAGCATA 58.997 41.667 10.38 0.00 41.90 3.14
530 2391 5.106555 GGTTGCCACATACATATGAGCATAC 60.107 44.000 10.38 15.80 41.90 2.39
531 2392 5.226194 TGCCACATACATATGAGCATACA 57.774 39.130 10.38 0.00 39.59 2.29
532 2393 5.807909 TGCCACATACATATGAGCATACAT 58.192 37.500 10.38 0.00 39.59 2.29
533 2394 6.945218 TGCCACATACATATGAGCATACATA 58.055 36.000 10.38 0.00 39.59 2.29
534 2395 7.567458 TGCCACATACATATGAGCATACATAT 58.433 34.615 10.38 0.00 42.07 1.78
535 2396 8.703743 TGCCACATACATATGAGCATACATATA 58.296 33.333 10.38 0.00 40.20 0.86
536 2397 9.546428 GCCACATACATATGAGCATACATATAA 57.454 33.333 10.38 4.25 40.20 0.98
568 2429 6.944557 TCACATATTTTACCGATATCAGCG 57.055 37.500 3.12 0.00 0.00 5.18
569 2430 6.452242 TCACATATTTTACCGATATCAGCGT 58.548 36.000 3.12 0.00 0.00 5.07
570 2431 6.364976 TCACATATTTTACCGATATCAGCGTG 59.635 38.462 3.12 0.00 0.00 5.34
571 2432 5.120208 ACATATTTTACCGATATCAGCGTGC 59.880 40.000 3.12 0.00 0.00 5.34
572 2433 2.588027 TTTACCGATATCAGCGTGCA 57.412 45.000 3.12 0.00 0.00 4.57
573 2434 1.847818 TTACCGATATCAGCGTGCAC 58.152 50.000 6.82 6.82 0.00 4.57
574 2435 1.029681 TACCGATATCAGCGTGCACT 58.970 50.000 16.19 0.00 0.00 4.40
575 2436 0.175760 ACCGATATCAGCGTGCACTT 59.824 50.000 16.19 0.00 0.00 3.16
576 2437 0.578683 CCGATATCAGCGTGCACTTG 59.421 55.000 16.19 13.13 0.00 3.16
577 2438 1.559831 CGATATCAGCGTGCACTTGA 58.440 50.000 19.13 19.13 0.00 3.02
578 2439 1.520174 CGATATCAGCGTGCACTTGAG 59.480 52.381 20.71 6.16 0.00 3.02
579 2440 2.544685 GATATCAGCGTGCACTTGAGT 58.455 47.619 20.71 14.17 0.00 3.41
580 2441 2.455674 TATCAGCGTGCACTTGAGTT 57.544 45.000 20.71 11.29 0.00 3.01
581 2442 0.870393 ATCAGCGTGCACTTGAGTTG 59.130 50.000 20.71 11.90 0.00 3.16
582 2443 0.461870 TCAGCGTGCACTTGAGTTGT 60.462 50.000 16.19 0.00 0.00 3.32
583 2444 0.041839 CAGCGTGCACTTGAGTTGTC 60.042 55.000 16.19 0.00 0.00 3.18
584 2445 0.179073 AGCGTGCACTTGAGTTGTCT 60.179 50.000 16.19 0.00 0.00 3.41
585 2446 0.233332 GCGTGCACTTGAGTTGTCTC 59.767 55.000 16.19 0.00 40.79 3.36
586 2447 1.858091 CGTGCACTTGAGTTGTCTCT 58.142 50.000 16.19 0.00 40.98 3.10
587 2448 1.789464 CGTGCACTTGAGTTGTCTCTC 59.211 52.381 16.19 0.00 40.98 3.20
588 2449 2.799562 CGTGCACTTGAGTTGTCTCTCA 60.800 50.000 16.19 0.00 41.85 3.27
599 2460 8.506168 TTGAGTTGTCTCTCAAACAATAGTTT 57.494 30.769 6.66 0.00 46.88 2.66
600 2461 8.397906 TTGAGTTGTCTCTCAAACAATAGTTTG 58.602 33.333 13.34 13.34 46.88 2.93
612 2473 6.458232 AACAATAGTTTGGTTACTTGCACA 57.542 33.333 0.00 0.00 37.15 4.57
613 2474 6.458232 ACAATAGTTTGGTTACTTGCACAA 57.542 33.333 0.00 0.00 37.15 3.33
614 2475 7.049799 ACAATAGTTTGGTTACTTGCACAAT 57.950 32.000 0.00 0.00 37.15 2.71
615 2476 8.172352 ACAATAGTTTGGTTACTTGCACAATA 57.828 30.769 0.00 0.00 37.15 1.90
616 2477 8.802267 ACAATAGTTTGGTTACTTGCACAATAT 58.198 29.630 0.00 0.00 37.15 1.28
619 2480 6.837992 AGTTTGGTTACTTGCACAATATACG 58.162 36.000 0.00 0.00 0.00 3.06
620 2481 4.868450 TGGTTACTTGCACAATATACGC 57.132 40.909 0.00 0.00 0.00 4.42
621 2482 3.307512 TGGTTACTTGCACAATATACGCG 59.692 43.478 3.53 3.53 0.00 6.01
622 2483 3.552699 GGTTACTTGCACAATATACGCGA 59.447 43.478 15.93 0.00 0.00 5.87
623 2484 4.317839 GGTTACTTGCACAATATACGCGAG 60.318 45.833 15.93 0.00 41.97 5.03
624 2485 2.201732 ACTTGCACAATATACGCGAGG 58.798 47.619 15.93 0.00 40.79 4.63
625 2486 2.201732 CTTGCACAATATACGCGAGGT 58.798 47.619 15.93 0.00 34.15 3.85
626 2487 1.847818 TGCACAATATACGCGAGGTC 58.152 50.000 15.93 0.00 0.00 3.85
627 2488 1.407618 TGCACAATATACGCGAGGTCT 59.592 47.619 15.93 0.00 0.00 3.85
628 2489 2.159156 TGCACAATATACGCGAGGTCTT 60.159 45.455 15.93 0.00 0.00 3.01
629 2490 2.218759 GCACAATATACGCGAGGTCTTG 59.781 50.000 15.93 11.99 0.00 3.02
630 2491 2.794910 CACAATATACGCGAGGTCTTGG 59.205 50.000 15.93 0.00 0.00 3.61
631 2492 2.223971 ACAATATACGCGAGGTCTTGGG 60.224 50.000 15.93 1.32 0.00 4.12
632 2493 1.991121 ATATACGCGAGGTCTTGGGA 58.009 50.000 15.93 0.00 0.00 4.37
633 2494 1.991121 TATACGCGAGGTCTTGGGAT 58.009 50.000 15.93 0.00 0.00 3.85
634 2495 0.674534 ATACGCGAGGTCTTGGGATC 59.325 55.000 15.93 0.00 0.00 3.36
635 2496 1.389609 TACGCGAGGTCTTGGGATCC 61.390 60.000 15.93 1.92 0.00 3.36
636 2497 2.427245 CGCGAGGTCTTGGGATCCT 61.427 63.158 12.58 0.00 0.00 3.24
637 2498 1.908483 GCGAGGTCTTGGGATCCTT 59.092 57.895 12.58 0.00 0.00 3.36
638 2499 0.253327 GCGAGGTCTTGGGATCCTTT 59.747 55.000 12.58 0.00 0.00 3.11
639 2500 1.485066 GCGAGGTCTTGGGATCCTTTA 59.515 52.381 12.58 0.00 0.00 1.85
640 2501 2.093128 GCGAGGTCTTGGGATCCTTTAA 60.093 50.000 12.58 4.21 0.00 1.52
641 2502 3.621461 GCGAGGTCTTGGGATCCTTTAAA 60.621 47.826 12.58 0.86 0.00 1.52
642 2503 4.585879 CGAGGTCTTGGGATCCTTTAAAA 58.414 43.478 12.58 0.00 0.00 1.52
643 2504 5.007682 CGAGGTCTTGGGATCCTTTAAAAA 58.992 41.667 12.58 0.00 0.00 1.94
664 2525 4.320608 AAAAACACACACATAAGGGCAG 57.679 40.909 0.00 0.00 0.00 4.85
665 2526 2.949177 AACACACACATAAGGGCAGA 57.051 45.000 0.00 0.00 0.00 4.26
666 2527 2.185004 ACACACACATAAGGGCAGAC 57.815 50.000 0.00 0.00 0.00 3.51
667 2528 1.419762 ACACACACATAAGGGCAGACA 59.580 47.619 0.00 0.00 0.00 3.41
668 2529 1.806542 CACACACATAAGGGCAGACAC 59.193 52.381 0.00 0.00 0.00 3.67
669 2530 1.078709 CACACATAAGGGCAGACACG 58.921 55.000 0.00 0.00 0.00 4.49
670 2531 0.036388 ACACATAAGGGCAGACACGG 60.036 55.000 0.00 0.00 0.00 4.94
671 2532 0.036388 CACATAAGGGCAGACACGGT 60.036 55.000 0.00 0.00 0.00 4.83
672 2533 0.249398 ACATAAGGGCAGACACGGTC 59.751 55.000 0.00 0.00 0.00 4.79
673 2534 0.806102 CATAAGGGCAGACACGGTCG 60.806 60.000 0.00 0.00 37.67 4.79
674 2535 1.956629 ATAAGGGCAGACACGGTCGG 61.957 60.000 0.00 0.00 37.67 4.79
679 2540 4.373116 CAGACACGGTCGGGGTGG 62.373 72.222 0.00 0.00 39.69 4.61
685 2546 4.096003 CGGTCGGGGTGGCATCTT 62.096 66.667 0.00 0.00 0.00 2.40
686 2547 2.438434 GGTCGGGGTGGCATCTTG 60.438 66.667 0.00 0.00 0.00 3.02
687 2548 2.351276 GTCGGGGTGGCATCTTGT 59.649 61.111 0.00 0.00 0.00 3.16
688 2549 1.303317 GTCGGGGTGGCATCTTGTT 60.303 57.895 0.00 0.00 0.00 2.83
689 2550 1.303236 TCGGGGTGGCATCTTGTTG 60.303 57.895 0.00 0.00 0.00 3.33
690 2551 2.342650 CGGGGTGGCATCTTGTTGG 61.343 63.158 0.00 0.00 0.00 3.77
691 2552 2.649129 GGGGTGGCATCTTGTTGGC 61.649 63.158 0.00 0.00 42.20 4.52
710 2571 9.646427 TTGTTGGCAAGTTATGTAAATAAATCC 57.354 29.630 0.00 0.00 0.00 3.01
711 2572 9.030452 TGTTGGCAAGTTATGTAAATAAATCCT 57.970 29.630 0.00 0.00 0.00 3.24
712 2573 9.516314 GTTGGCAAGTTATGTAAATAAATCCTC 57.484 33.333 0.00 0.00 0.00 3.71
713 2574 8.232913 TGGCAAGTTATGTAAATAAATCCTCC 57.767 34.615 0.00 0.00 0.00 4.30
714 2575 7.286775 TGGCAAGTTATGTAAATAAATCCTCCC 59.713 37.037 0.00 0.00 0.00 4.30
715 2576 7.360361 GCAAGTTATGTAAATAAATCCTCCCG 58.640 38.462 0.00 0.00 0.00 5.14
716 2577 7.227910 GCAAGTTATGTAAATAAATCCTCCCGA 59.772 37.037 0.00 0.00 0.00 5.14
717 2578 8.774586 CAAGTTATGTAAATAAATCCTCCCGAG 58.225 37.037 0.00 0.00 0.00 4.63
726 2587 3.155167 CCTCCCGAGGCACCCTAC 61.155 72.222 0.00 0.00 42.44 3.18
727 2588 2.363795 CTCCCGAGGCACCCTACA 60.364 66.667 0.00 0.00 31.76 2.74
728 2589 1.762460 CTCCCGAGGCACCCTACAT 60.762 63.158 0.00 0.00 31.76 2.29
729 2590 2.032860 CTCCCGAGGCACCCTACATG 62.033 65.000 0.00 0.00 31.76 3.21
730 2591 2.063979 CCCGAGGCACCCTACATGA 61.064 63.158 0.00 0.00 31.76 3.07
731 2592 1.622607 CCCGAGGCACCCTACATGAA 61.623 60.000 0.00 0.00 31.76 2.57
732 2593 0.469917 CCGAGGCACCCTACATGAAT 59.530 55.000 0.00 0.00 31.76 2.57
733 2594 1.541233 CCGAGGCACCCTACATGAATC 60.541 57.143 0.00 0.00 31.76 2.52
734 2595 1.138859 CGAGGCACCCTACATGAATCA 59.861 52.381 0.00 0.00 31.76 2.57
735 2596 2.565841 GAGGCACCCTACATGAATCAC 58.434 52.381 0.00 0.00 31.76 3.06
736 2597 1.915489 AGGCACCCTACATGAATCACA 59.085 47.619 0.00 0.00 28.47 3.58
737 2598 2.092753 AGGCACCCTACATGAATCACAG 60.093 50.000 0.00 0.00 28.47 3.66
738 2599 2.356125 GGCACCCTACATGAATCACAGT 60.356 50.000 0.00 0.00 0.00 3.55
739 2600 3.118408 GGCACCCTACATGAATCACAGTA 60.118 47.826 0.00 0.00 0.00 2.74
740 2601 4.444876 GGCACCCTACATGAATCACAGTAT 60.445 45.833 0.00 0.00 0.00 2.12
741 2602 5.126067 GCACCCTACATGAATCACAGTATT 58.874 41.667 0.00 0.00 0.00 1.89
742 2603 5.590259 GCACCCTACATGAATCACAGTATTT 59.410 40.000 0.00 0.00 0.00 1.40
743 2604 6.238484 GCACCCTACATGAATCACAGTATTTC 60.238 42.308 0.00 0.00 0.00 2.17
744 2605 7.050377 CACCCTACATGAATCACAGTATTTCT 58.950 38.462 0.00 0.00 0.00 2.52
745 2606 8.204160 CACCCTACATGAATCACAGTATTTCTA 58.796 37.037 0.00 0.00 0.00 2.10
746 2607 8.938883 ACCCTACATGAATCACAGTATTTCTAT 58.061 33.333 0.00 0.00 0.00 1.98
747 2608 9.212641 CCCTACATGAATCACAGTATTTCTATG 57.787 37.037 0.00 0.00 0.00 2.23
748 2609 9.987272 CCTACATGAATCACAGTATTTCTATGA 57.013 33.333 0.00 0.00 33.90 2.15
769 2630 9.859427 CTATGAAACTATCCAAAATTTTCTGCA 57.141 29.630 0.00 0.00 0.00 4.41
771 2632 8.954950 TGAAACTATCCAAAATTTTCTGCAAA 57.045 26.923 0.00 0.00 0.00 3.68
772 2633 9.558396 TGAAACTATCCAAAATTTTCTGCAAAT 57.442 25.926 0.00 0.00 36.57 2.32
785 2646 9.786105 AATTTTCTGCAAATTTTTGTTCGAATT 57.214 22.222 0.00 0.00 41.57 2.17
786 2647 9.786105 ATTTTCTGCAAATTTTTGTTCGAATTT 57.214 22.222 0.00 0.00 40.24 1.82
793 2654 7.477144 AAATTTTTGTTCGAATTTGAGGGAC 57.523 32.000 0.00 0.00 34.97 4.46
794 2655 3.889196 TTTGTTCGAATTTGAGGGACG 57.111 42.857 0.00 0.00 0.00 4.79
795 2656 1.153353 TGTTCGAATTTGAGGGACGC 58.847 50.000 0.00 0.00 0.00 5.19
796 2657 1.153353 GTTCGAATTTGAGGGACGCA 58.847 50.000 0.00 0.00 35.48 5.24
797 2658 1.737793 GTTCGAATTTGAGGGACGCAT 59.262 47.619 0.00 0.00 38.39 4.73
798 2659 2.107950 TCGAATTTGAGGGACGCATT 57.892 45.000 0.00 0.00 38.39 3.56
799 2660 3.254470 TCGAATTTGAGGGACGCATTA 57.746 42.857 0.00 0.00 38.39 1.90
800 2661 3.804036 TCGAATTTGAGGGACGCATTAT 58.196 40.909 0.00 0.00 38.39 1.28
801 2662 4.951254 TCGAATTTGAGGGACGCATTATA 58.049 39.130 0.00 0.00 38.39 0.98
802 2663 5.547465 TCGAATTTGAGGGACGCATTATAT 58.453 37.500 0.00 0.00 38.39 0.86
803 2664 6.693466 TCGAATTTGAGGGACGCATTATATA 58.307 36.000 0.00 0.00 38.39 0.86
804 2665 7.327975 TCGAATTTGAGGGACGCATTATATAT 58.672 34.615 0.00 0.00 38.39 0.86
805 2666 8.471609 TCGAATTTGAGGGACGCATTATATATA 58.528 33.333 0.00 0.00 38.39 0.86
806 2667 8.540492 CGAATTTGAGGGACGCATTATATATAC 58.460 37.037 0.00 0.00 38.39 1.47
807 2668 9.378551 GAATTTGAGGGACGCATTATATATACA 57.621 33.333 0.00 0.00 38.39 2.29
808 2669 9.733556 AATTTGAGGGACGCATTATATATACAA 57.266 29.630 0.00 0.00 38.39 2.41
809 2670 9.733556 ATTTGAGGGACGCATTATATATACAAA 57.266 29.630 0.00 0.00 38.39 2.83
810 2671 9.562408 TTTGAGGGACGCATTATATATACAAAA 57.438 29.630 0.00 0.00 38.39 2.44
811 2672 9.562408 TTGAGGGACGCATTATATATACAAAAA 57.438 29.630 0.00 0.00 38.39 1.94
832 2693 3.859411 AAAAGACCTGCGTTTCAAACA 57.141 38.095 0.22 0.00 0.00 2.83
833 2694 3.420839 AAAGACCTGCGTTTCAAACAG 57.579 42.857 0.22 0.00 0.00 3.16
834 2695 2.325583 AGACCTGCGTTTCAAACAGA 57.674 45.000 0.22 0.00 33.10 3.41
835 2696 2.213499 AGACCTGCGTTTCAAACAGAG 58.787 47.619 0.22 0.00 33.10 3.35
836 2697 0.663153 ACCTGCGTTTCAAACAGAGC 59.337 50.000 0.22 0.00 33.10 4.09
837 2698 0.947244 CCTGCGTTTCAAACAGAGCT 59.053 50.000 0.22 0.00 33.10 4.09
838 2699 1.334419 CCTGCGTTTCAAACAGAGCTG 60.334 52.381 0.22 0.35 33.10 4.24
839 2700 1.599071 CTGCGTTTCAAACAGAGCTGA 59.401 47.619 4.21 0.00 33.10 4.26
840 2701 1.330521 TGCGTTTCAAACAGAGCTGAC 59.669 47.619 4.21 0.00 0.00 3.51
844 2705 2.612212 GTTTCAAACAGAGCTGACGGAA 59.388 45.455 4.21 2.14 0.00 4.30
856 2717 1.303282 GACGGAAATGGGCCTCCTT 59.697 57.895 4.53 0.00 0.00 3.36
858 2719 0.611896 ACGGAAATGGGCCTCCTTTG 60.612 55.000 4.53 0.00 31.67 2.77
859 2720 0.323360 CGGAAATGGGCCTCCTTTGA 60.323 55.000 4.53 0.00 31.67 2.69
861 2722 2.470990 GGAAATGGGCCTCCTTTGAAT 58.529 47.619 4.53 0.00 31.67 2.57
862 2723 2.840038 GGAAATGGGCCTCCTTTGAATT 59.160 45.455 4.53 0.00 31.67 2.17
863 2724 3.118629 GGAAATGGGCCTCCTTTGAATTC 60.119 47.826 4.53 0.00 31.67 2.17
884 2747 2.843545 GGCCCACCTTCACTGGAA 59.156 61.111 0.00 0.00 0.00 3.53
907 2771 3.485463 TTGACTCCCAGTTTACTGTGG 57.515 47.619 8.91 9.37 42.27 4.17
916 2780 1.071814 TTTACTGTGGTCCACGGGC 59.928 57.895 30.30 3.04 44.25 6.13
918 2782 1.823169 TTACTGTGGTCCACGGGCTC 61.823 60.000 30.30 1.91 44.25 4.70
984 2853 3.034635 TGACTAGCTGAGATCCCCTTTC 58.965 50.000 0.00 0.00 0.00 2.62
1191 3066 1.059006 ATGGTGCCCCTCATCTCTCC 61.059 60.000 0.00 0.00 0.00 3.71
1197 3094 0.178935 CCCCTCATCTCTCCCTCTCC 60.179 65.000 0.00 0.00 0.00 3.71
1202 3099 1.780309 TCATCTCTCCCTCTCCCTCTC 59.220 57.143 0.00 0.00 0.00 3.20
1203 3100 1.158007 ATCTCTCCCTCTCCCTCTCC 58.842 60.000 0.00 0.00 0.00 3.71
1236 3509 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1237 3510 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1239 3512 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1241 3514 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1242 3515 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1243 3516 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1244 3517 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1245 3518 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1246 3519 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1247 3520 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1248 3521 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1249 3522 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1250 3523 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
1251 3524 4.871822 TCTCTCTCTCTCTCTCTCTCTGA 58.128 47.826 0.00 0.00 0.00 3.27
1252 3525 4.646945 TCTCTCTCTCTCTCTCTCTCTGAC 59.353 50.000 0.00 0.00 0.00 3.51
1253 3526 3.381590 TCTCTCTCTCTCTCTCTCTGACG 59.618 52.174 0.00 0.00 0.00 4.35
1285 3558 0.038159 CTCTTTCTTCCGCCGTCTGT 60.038 55.000 0.00 0.00 0.00 3.41
1286 3559 0.038526 TCTTTCTTCCGCCGTCTGTC 60.039 55.000 0.00 0.00 0.00 3.51
1287 3560 0.038159 CTTTCTTCCGCCGTCTGTCT 60.038 55.000 0.00 0.00 0.00 3.41
1313 3586 0.179124 CTGCTCAGCCGACTCTAACC 60.179 60.000 0.00 0.00 0.00 2.85
1469 3742 5.505173 AAAGTTATGCTGAATTGATCGGG 57.495 39.130 0.00 0.00 34.76 5.14
1472 3745 1.972872 ATGCTGAATTGATCGGGGTC 58.027 50.000 0.00 0.00 34.76 4.46
1488 3761 1.400494 GGGTCGCGATTGTTATTTGCT 59.600 47.619 14.06 0.00 0.00 3.91
1538 3811 0.946221 CTGCTGTCGACCACCTTCAC 60.946 60.000 14.12 0.00 0.00 3.18
1568 3841 3.055385 GTCATTGTAGGTGCCACTTCCTA 60.055 47.826 0.00 0.00 35.51 2.94
1579 3856 2.379972 CCACTTCCTACCTCGACATCT 58.620 52.381 0.00 0.00 0.00 2.90
1581 3858 3.952323 CCACTTCCTACCTCGACATCTTA 59.048 47.826 0.00 0.00 0.00 2.10
1588 3877 9.843334 CTTCCTACCTCGACATCTTATTTATAC 57.157 37.037 0.00 0.00 0.00 1.47
1657 3947 3.470709 ACTGTCACAAGTTCAGTCATGG 58.529 45.455 0.00 0.00 37.84 3.66
1758 4090 7.970614 GTGGAACAAATCAAATAACATCCTCTC 59.029 37.037 0.00 0.00 44.16 3.20
1932 4265 7.979537 ACAAACAGGACCTTTTATTTTCAGAAC 59.020 33.333 0.00 0.00 0.00 3.01
2062 4395 3.026694 AGTGCAGCTTAATCCCCATTTC 58.973 45.455 0.00 0.00 0.00 2.17
2093 4426 1.148310 CCTCAAGTACGTTGGCAGTG 58.852 55.000 0.00 0.00 36.71 3.66
2106 4439 3.569194 TGGCAGTGTCTTCCTTGTTTA 57.431 42.857 0.00 0.00 0.00 2.01
2112 4445 5.333111 GCAGTGTCTTCCTTGTTTACTTACG 60.333 44.000 0.00 0.00 0.00 3.18
2183 4516 8.417106 TGTGAAAATTGAGTTATTGGTTTGCTA 58.583 29.630 0.00 0.00 0.00 3.49
2577 4912 6.620877 TGAATCACAGTAAACTATGGACCT 57.379 37.500 0.00 0.00 0.00 3.85
2905 5262 9.890629 TCTAGTAAATAGATGAATGTTGTTGCT 57.109 29.630 0.00 0.00 35.50 3.91
2915 5272 6.182039 TGAATGTTGTTGCTTATAGACTGC 57.818 37.500 0.00 0.00 0.00 4.40
2919 5276 8.455903 AATGTTGTTGCTTATAGACTGCATAT 57.544 30.769 0.00 0.00 36.55 1.78
3060 5417 4.513692 TGGTGTTTGGTGATCTAGTTTTCG 59.486 41.667 0.00 0.00 0.00 3.46
3260 5617 9.349713 TCTCTTGTGTTAAATTATGAAGGTTGT 57.650 29.630 0.00 0.00 0.00 3.32
3319 5676 1.455849 CAGGGTTGGTGGCTTCTGA 59.544 57.895 0.00 0.00 0.00 3.27
3392 5749 7.770366 TTTTCCTTATTGGGTACTCTTTTCC 57.230 36.000 0.00 0.00 36.20 3.13
3423 5780 3.447229 CACAAACCCTCCATTGGATTACC 59.553 47.826 5.70 0.00 0.00 2.85
3433 5790 5.865085 TCCATTGGATTACCTATGCTGTAC 58.135 41.667 0.00 0.00 44.10 2.90
3674 6031 8.744008 TTTCTTCTTTGTCGACTAGTTATCTG 57.256 34.615 17.92 0.00 0.00 2.90
3700 6057 5.007626 GCACATCTTGTTCTGAACTGTGTAA 59.992 40.000 27.09 13.21 36.67 2.41
3703 6060 5.673337 TCTTGTTCTGAACTGTGTAATGC 57.327 39.130 20.18 0.00 0.00 3.56
3812 6170 7.553881 TTTCTTCTTCTGAATATTTAGCCGG 57.446 36.000 0.00 0.00 0.00 6.13
3827 6185 1.447314 CCGGTCCTGTTTAGTCGGC 60.447 63.158 0.00 0.00 0.00 5.54
3840 6198 5.298276 TGTTTAGTCGGCTGAAGAAAAATGT 59.702 36.000 0.00 0.00 0.00 2.71
3861 6219 2.766263 TGAGGGAAGCACATGTAGGTAG 59.234 50.000 0.00 0.00 0.00 3.18
3918 6276 6.972901 TGATTCATACTAGTTAGAACACTGCG 59.027 38.462 0.00 0.00 0.00 5.18
3943 6301 3.809832 CCTGCCTACCTAAATGATGTTCG 59.190 47.826 0.00 0.00 0.00 3.95
4001 6359 5.928839 ACAGCAGTAGTTTTCTAGACATGTG 59.071 40.000 1.15 0.00 32.55 3.21
4070 6428 0.617413 ATGCTAACTGCTGCTGTCCT 59.383 50.000 12.66 1.06 43.37 3.85
4215 6573 1.414550 GCCAGGTGAGAGATACCCTTC 59.585 57.143 0.00 0.00 39.05 3.46
4223 6581 1.008938 AGAGATACCCTTCCTGTGGCT 59.991 52.381 0.00 0.00 0.00 4.75
4229 6591 3.542969 ACCCTTCCTGTGGCTTAAAAT 57.457 42.857 0.00 0.00 0.00 1.82
4232 6683 3.445096 CCCTTCCTGTGGCTTAAAATCAG 59.555 47.826 0.00 0.00 0.00 2.90
4245 6696 6.545298 GGCTTAAAATCAGTCATCTCAATCCT 59.455 38.462 0.00 0.00 0.00 3.24
4256 6707 3.708403 TCTCAATCCTGTCAAGCATGT 57.292 42.857 0.00 0.00 0.00 3.21
4259 6710 5.121105 TCTCAATCCTGTCAAGCATGTATG 58.879 41.667 0.00 0.00 0.00 2.39
4260 6711 4.847198 TCAATCCTGTCAAGCATGTATGT 58.153 39.130 0.00 0.00 0.00 2.29
4261 6712 5.988287 TCAATCCTGTCAAGCATGTATGTA 58.012 37.500 0.00 0.00 0.00 2.29
4262 6713 6.413892 TCAATCCTGTCAAGCATGTATGTAA 58.586 36.000 0.00 0.00 0.00 2.41
4263 6714 6.316140 TCAATCCTGTCAAGCATGTATGTAAC 59.684 38.462 0.00 0.00 0.00 2.50
4264 6715 4.513442 TCCTGTCAAGCATGTATGTAACC 58.487 43.478 0.00 0.00 0.00 2.85
4267 6718 5.163723 CCTGTCAAGCATGTATGTAACCTTG 60.164 44.000 0.00 0.00 0.00 3.61
4268 6719 5.312895 TGTCAAGCATGTATGTAACCTTGT 58.687 37.500 0.00 0.00 33.37 3.16
4269 6720 6.468543 TGTCAAGCATGTATGTAACCTTGTA 58.531 36.000 0.00 0.00 33.37 2.41
4271 6722 7.065683 TGTCAAGCATGTATGTAACCTTGTATG 59.934 37.037 0.00 0.00 33.37 2.39
4273 6724 8.261522 TCAAGCATGTATGTAACCTTGTATGTA 58.738 33.333 0.00 0.00 33.37 2.29
4276 6727 7.497909 AGCATGTATGTAACCTTGTATGTAACC 59.502 37.037 0.00 0.00 0.00 2.85
4277 6728 7.255001 GCATGTATGTAACCTTGTATGTAACCC 60.255 40.741 0.00 0.00 0.00 4.11
4278 6729 7.255199 TGTATGTAACCTTGTATGTAACCCA 57.745 36.000 0.00 0.00 0.00 4.51
4279 6730 7.863722 TGTATGTAACCTTGTATGTAACCCAT 58.136 34.615 0.00 0.00 37.58 4.00
4280 6731 8.990203 TGTATGTAACCTTGTATGTAACCCATA 58.010 33.333 0.00 0.00 34.86 2.74
4281 6732 9.835389 GTATGTAACCTTGTATGTAACCCATAA 57.165 33.333 0.00 0.00 37.77 1.90
4494 6953 7.148154 GCCATGTTGTATTGTTATTGTAGACCA 60.148 37.037 0.00 0.00 0.00 4.02
4530 6989 6.374333 GCAGAACTAAATGGTATGTTCTTCCA 59.626 38.462 0.00 0.00 44.32 3.53
4591 7149 7.428826 ACTCTAGGAAAATTGCAGAAAGTTTG 58.571 34.615 0.00 0.00 36.25 2.93
4592 7150 6.215845 TCTAGGAAAATTGCAGAAAGTTTGC 58.784 36.000 0.00 0.00 42.40 3.68
4630 7439 4.181578 CACACTTGGTCGAATTACTAGGG 58.818 47.826 0.00 0.00 0.00 3.53
4681 7490 4.830600 ACCATGTCCGAACTTTAAAACCAT 59.169 37.500 0.00 0.00 0.00 3.55
4706 7515 1.452651 GCTTGCTGCCTGCCTGATA 60.453 57.895 0.00 0.00 42.00 2.15
4745 7554 8.333235 TCCCTACAACAATCCATATTACTTGTT 58.667 33.333 0.00 0.00 41.22 2.83
4757 7566 7.174253 TCCATATTACTTGTTGTCCAAACAGAC 59.826 37.037 0.00 0.00 36.57 3.51
4786 7595 9.962783 ATCTAGACGTATTTCAGTGGTAAATAC 57.037 33.333 13.63 13.63 42.45 1.89
4790 7599 8.255206 AGACGTATTTCAGTGGTAAATACATCA 58.745 33.333 18.18 0.00 44.51 3.07
4808 7617 4.211374 ACATCAGTTTGAGCGACAAGTAAC 59.789 41.667 0.00 0.00 39.77 2.50
4809 7618 2.792674 TCAGTTTGAGCGACAAGTAACG 59.207 45.455 0.00 0.00 39.77 3.18
4830 7639 1.342672 GGATCGGAGGGCCCTTGTAA 61.343 60.000 29.39 12.83 0.00 2.41
4831 7640 0.765510 GATCGGAGGGCCCTTGTAAT 59.234 55.000 29.39 17.30 0.00 1.89
4832 7641 1.975680 GATCGGAGGGCCCTTGTAATA 59.024 52.381 29.39 9.26 0.00 0.98
4834 7643 1.697432 TCGGAGGGCCCTTGTAATATG 59.303 52.381 29.39 9.81 0.00 1.78
4835 7644 1.271379 CGGAGGGCCCTTGTAATATGG 60.271 57.143 29.39 3.67 0.00 2.74
4836 7645 2.062636 GGAGGGCCCTTGTAATATGGA 58.937 52.381 29.39 0.00 0.00 3.41
4837 7646 2.649816 GGAGGGCCCTTGTAATATGGAT 59.350 50.000 29.39 0.00 0.00 3.41
4838 7647 3.850173 GGAGGGCCCTTGTAATATGGATA 59.150 47.826 29.39 0.00 0.00 2.59
4839 7648 4.080299 GGAGGGCCCTTGTAATATGGATAG 60.080 50.000 29.39 0.00 0.00 2.08
4840 7649 3.852578 AGGGCCCTTGTAATATGGATAGG 59.147 47.826 22.28 0.00 0.00 2.57
4841 7650 3.591977 GGGCCCTTGTAATATGGATAGGT 59.408 47.826 17.04 0.00 0.00 3.08
4842 7651 4.044191 GGGCCCTTGTAATATGGATAGGTT 59.956 45.833 17.04 0.00 0.00 3.50
4843 7652 5.459094 GGGCCCTTGTAATATGGATAGGTTT 60.459 44.000 17.04 0.00 0.00 3.27
4844 7653 5.476945 GGCCCTTGTAATATGGATAGGTTTG 59.523 44.000 0.00 0.00 0.00 2.93
4845 7654 6.303839 GCCCTTGTAATATGGATAGGTTTGA 58.696 40.000 0.00 0.00 0.00 2.69
4846 7655 6.431234 GCCCTTGTAATATGGATAGGTTTGAG 59.569 42.308 0.00 0.00 0.00 3.02
4847 7656 6.431234 CCCTTGTAATATGGATAGGTTTGAGC 59.569 42.308 0.00 0.00 0.00 4.26
4848 7657 6.998074 CCTTGTAATATGGATAGGTTTGAGCA 59.002 38.462 0.00 0.00 0.00 4.26
4849 7658 7.502226 CCTTGTAATATGGATAGGTTTGAGCAA 59.498 37.037 0.00 0.00 0.00 3.91
4850 7659 7.801716 TGTAATATGGATAGGTTTGAGCAAC 57.198 36.000 0.00 0.00 34.18 4.17
4851 7660 7.342581 TGTAATATGGATAGGTTTGAGCAACA 58.657 34.615 0.00 0.00 37.07 3.33
4852 7661 7.831690 TGTAATATGGATAGGTTTGAGCAACAA 59.168 33.333 0.00 0.00 37.07 2.83
4853 7662 6.949352 ATATGGATAGGTTTGAGCAACAAG 57.051 37.500 0.00 0.00 39.77 3.16
4854 7663 4.098914 TGGATAGGTTTGAGCAACAAGT 57.901 40.909 0.00 0.00 39.77 3.16
4855 7664 5.235850 TGGATAGGTTTGAGCAACAAGTA 57.764 39.130 0.00 0.00 39.77 2.24
4856 7665 5.626142 TGGATAGGTTTGAGCAACAAGTAA 58.374 37.500 0.00 0.00 39.77 2.24
4857 7666 6.245408 TGGATAGGTTTGAGCAACAAGTAAT 58.755 36.000 0.00 0.00 39.77 1.89
4858 7667 7.398829 TGGATAGGTTTGAGCAACAAGTAATA 58.601 34.615 0.00 0.00 39.77 0.98
4930 7739 3.012560 CCTAGCTAGTGGGCATTGC 57.987 57.895 19.31 0.00 34.17 3.56
4936 7745 1.798813 GCTAGTGGGCATTGCGTATAC 59.201 52.381 1.91 0.00 0.00 1.47
4941 7750 2.224079 GTGGGCATTGCGTATACATGAG 59.776 50.000 0.00 0.00 0.00 2.90
4947 7756 4.376819 GCATTGCGTATACATGAGAAGAGC 60.377 45.833 0.00 0.00 0.00 4.09
4967 7776 4.759782 AGCGTAAATGACATAGCTCAACT 58.240 39.130 0.00 0.00 0.00 3.16
4988 7797 6.123045 ACTAGTGGCCAATAAACAGTTACT 57.877 37.500 14.80 1.76 0.00 2.24
4997 7806 7.600752 GGCCAATAAACAGTTACTGCAAAAATA 59.399 33.333 12.80 0.00 34.37 1.40
5027 7836 9.520204 AACACACAAGAACAAGAAGATTATTTG 57.480 29.630 0.00 0.00 0.00 2.32
5028 7837 7.649306 ACACACAAGAACAAGAAGATTATTTGC 59.351 33.333 0.00 0.00 0.00 3.68
5029 7838 7.648908 CACACAAGAACAAGAAGATTATTTGCA 59.351 33.333 0.00 0.00 0.00 4.08
5067 7881 4.338964 ACACACAAACAGAAATGCATCAGA 59.661 37.500 0.00 0.00 0.00 3.27
5086 7900 5.890334 TCAGAAAAACAAGCAAACAGGTAG 58.110 37.500 0.00 0.00 0.00 3.18
5097 7911 8.246180 ACAAGCAAACAGGTAGATAAATCAATG 58.754 33.333 0.00 0.00 0.00 2.82
5104 7918 6.538742 ACAGGTAGATAAATCAATGAACCACG 59.461 38.462 1.51 0.00 0.00 4.94
5107 7921 5.235305 AGATAAATCAATGAACCACGCAC 57.765 39.130 0.00 0.00 0.00 5.34
5108 7922 4.699735 AGATAAATCAATGAACCACGCACA 59.300 37.500 0.00 0.00 0.00 4.57
5109 7923 2.995466 AATCAATGAACCACGCACAG 57.005 45.000 0.00 0.00 0.00 3.66
5110 7924 1.896220 ATCAATGAACCACGCACAGT 58.104 45.000 0.00 0.00 0.00 3.55
5111 7925 1.225855 TCAATGAACCACGCACAGTC 58.774 50.000 0.00 0.00 0.00 3.51
5112 7926 1.202639 TCAATGAACCACGCACAGTCT 60.203 47.619 0.00 0.00 0.00 3.24
5113 7927 1.069703 CAATGAACCACGCACAGTCTG 60.070 52.381 0.00 0.00 0.00 3.51
5114 7928 1.230635 ATGAACCACGCACAGTCTGC 61.231 55.000 0.00 0.00 43.21 4.26
5145 7974 3.066233 GCCTCGTCTTCCGACCCTC 62.066 68.421 0.00 0.00 41.60 4.30
5173 8002 0.742505 CATGCTTGTGATCCGGCATT 59.257 50.000 0.00 0.00 42.49 3.56
5346 8175 4.790962 AGAGCATGCCCAGCCACG 62.791 66.667 15.66 0.00 0.00 4.94
5361 8190 3.075005 ACGCCCGGTACATGAGCT 61.075 61.111 0.00 0.00 0.00 4.09
5376 8205 3.081993 GCTTCCAGCGCGTCTTAC 58.918 61.111 8.43 0.00 0.00 2.34
5386 8215 3.751246 CGTCTTACGGTCCGGCCA 61.751 66.667 17.28 0.00 38.08 5.36
5387 8216 2.658422 GTCTTACGGTCCGGCCAA 59.342 61.111 17.28 5.68 36.97 4.52
5388 8217 1.447314 GTCTTACGGTCCGGCCAAG 60.447 63.158 17.28 14.96 36.97 3.61
5389 8218 1.909781 TCTTACGGTCCGGCCAAGT 60.910 57.895 17.28 7.86 36.97 3.16
5390 8219 1.447314 CTTACGGTCCGGCCAAGTC 60.447 63.158 17.28 0.00 36.97 3.01
5391 8220 2.162338 CTTACGGTCCGGCCAAGTCA 62.162 60.000 17.28 0.00 36.97 3.41
5392 8221 1.546589 TTACGGTCCGGCCAAGTCAT 61.547 55.000 17.28 0.00 36.97 3.06
5393 8222 1.952102 TACGGTCCGGCCAAGTCATC 61.952 60.000 17.28 0.00 36.97 2.92
5394 8223 2.511600 GGTCCGGCCAAGTCATCG 60.512 66.667 2.24 0.00 37.17 3.84
5395 8224 3.195698 GTCCGGCCAAGTCATCGC 61.196 66.667 2.24 0.00 0.00 4.58
5396 8225 3.700970 TCCGGCCAAGTCATCGCA 61.701 61.111 2.24 0.00 0.00 5.10
5397 8226 3.197790 CCGGCCAAGTCATCGCAG 61.198 66.667 2.24 0.00 0.00 5.18
5398 8227 3.869272 CGGCCAAGTCATCGCAGC 61.869 66.667 2.24 0.00 0.00 5.25
5399 8228 3.869272 GGCCAAGTCATCGCAGCG 61.869 66.667 9.06 9.06 0.00 5.18
5400 8229 3.869272 GCCAAGTCATCGCAGCGG 61.869 66.667 16.42 0.00 0.00 5.52
5401 8230 2.125552 CCAAGTCATCGCAGCGGA 60.126 61.111 16.42 1.66 0.00 5.54
5402 8231 1.741401 CCAAGTCATCGCAGCGGAA 60.741 57.895 16.42 0.00 0.00 4.30
5403 8232 1.699656 CCAAGTCATCGCAGCGGAAG 61.700 60.000 16.42 5.31 0.00 3.46
5418 8247 2.977914 CGGAAGCAAAGATCAGAAGGA 58.022 47.619 0.00 0.00 0.00 3.36
5419 8248 2.675348 CGGAAGCAAAGATCAGAAGGAC 59.325 50.000 0.00 0.00 0.00 3.85
5420 8249 2.675348 GGAAGCAAAGATCAGAAGGACG 59.325 50.000 0.00 0.00 0.00 4.79
5421 8250 1.731720 AGCAAAGATCAGAAGGACGC 58.268 50.000 0.00 0.00 0.00 5.19
5422 8251 1.277557 AGCAAAGATCAGAAGGACGCT 59.722 47.619 0.00 0.00 0.00 5.07
5423 8252 1.663135 GCAAAGATCAGAAGGACGCTC 59.337 52.381 0.00 0.00 0.00 5.03
5424 8253 2.275318 CAAAGATCAGAAGGACGCTCC 58.725 52.381 0.00 0.00 36.58 4.70
5425 8254 0.457851 AAGATCAGAAGGACGCTCCG 59.542 55.000 0.00 0.00 42.75 4.63
5426 8255 1.066587 GATCAGAAGGACGCTCCGG 59.933 63.158 0.00 0.00 42.75 5.14
5427 8256 1.668101 GATCAGAAGGACGCTCCGGT 61.668 60.000 0.00 0.00 42.75 5.28
5428 8257 1.668101 ATCAGAAGGACGCTCCGGTC 61.668 60.000 0.00 0.00 42.75 4.79
5429 8258 2.282958 AGAAGGACGCTCCGGTCA 60.283 61.111 0.00 0.00 42.75 4.02
5430 8259 1.906824 AGAAGGACGCTCCGGTCAA 60.907 57.895 0.00 0.00 42.75 3.18
5431 8260 1.005394 GAAGGACGCTCCGGTCAAA 60.005 57.895 0.00 0.00 42.75 2.69
5432 8261 0.391263 GAAGGACGCTCCGGTCAAAT 60.391 55.000 0.00 0.00 42.75 2.32
5433 8262 0.673644 AAGGACGCTCCGGTCAAATG 60.674 55.000 0.00 0.00 42.75 2.32
5434 8263 1.079405 GGACGCTCCGGTCAAATGA 60.079 57.895 0.00 0.00 38.70 2.57
5435 8264 1.084370 GGACGCTCCGGTCAAATGAG 61.084 60.000 0.00 0.00 38.70 2.90
5436 8265 0.108804 GACGCTCCGGTCAAATGAGA 60.109 55.000 0.00 0.00 36.91 3.27
5437 8266 0.389948 ACGCTCCGGTCAAATGAGAC 60.390 55.000 0.00 0.00 37.80 3.36
5438 8267 1.413767 CGCTCCGGTCAAATGAGACG 61.414 60.000 0.00 0.00 39.42 4.18
5439 8268 1.696832 GCTCCGGTCAAATGAGACGC 61.697 60.000 0.00 0.00 39.42 5.19
5440 8269 1.079405 TCCGGTCAAATGAGACGCC 60.079 57.895 0.00 0.00 39.42 5.68
5441 8270 1.079127 CCGGTCAAATGAGACGCCT 60.079 57.895 0.00 0.00 39.42 5.52
5442 8271 0.174845 CCGGTCAAATGAGACGCCTA 59.825 55.000 0.00 0.00 39.42 3.93
5443 8272 1.404986 CCGGTCAAATGAGACGCCTAA 60.405 52.381 0.00 0.00 39.42 2.69
5444 8273 1.927174 CGGTCAAATGAGACGCCTAAG 59.073 52.381 0.00 0.00 39.42 2.18
5445 8274 1.666189 GGTCAAATGAGACGCCTAAGC 59.334 52.381 0.00 0.00 39.42 3.09
5446 8275 2.346803 GTCAAATGAGACGCCTAAGCA 58.653 47.619 0.00 0.00 39.83 3.91
5447 8276 2.939103 GTCAAATGAGACGCCTAAGCAT 59.061 45.455 0.00 0.00 39.83 3.79
5448 8277 3.375299 GTCAAATGAGACGCCTAAGCATT 59.625 43.478 0.00 0.00 39.83 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
300 774 3.812019 CTGGGTCGAGGTCGTCCG 61.812 72.222 9.12 0.00 45.99 4.79
380 854 1.446099 GCGCAGAATCTCGTGGTCA 60.446 57.895 0.30 0.00 0.00 4.02
442 2303 0.251165 CCTTCGTCAAACCCACCCAT 60.251 55.000 0.00 0.00 0.00 4.00
462 2323 2.214244 CACACGATCTCATAAAGCGACG 59.786 50.000 0.00 0.00 0.00 5.12
463 2324 2.535984 CCACACGATCTCATAAAGCGAC 59.464 50.000 0.00 0.00 0.00 5.19
542 2403 9.083080 CGCTGATATCGGTAAAATATGTGAATA 57.917 33.333 13.12 0.00 0.00 1.75
543 2404 7.602644 ACGCTGATATCGGTAAAATATGTGAAT 59.397 33.333 13.12 0.00 0.00 2.57
544 2405 6.926826 ACGCTGATATCGGTAAAATATGTGAA 59.073 34.615 13.12 0.00 0.00 3.18
545 2406 6.364976 CACGCTGATATCGGTAAAATATGTGA 59.635 38.462 13.12 0.00 0.00 3.58
546 2407 6.525355 CACGCTGATATCGGTAAAATATGTG 58.475 40.000 13.12 5.90 0.00 3.21
547 2408 5.120208 GCACGCTGATATCGGTAAAATATGT 59.880 40.000 13.12 0.00 0.00 2.29
548 2409 5.120053 TGCACGCTGATATCGGTAAAATATG 59.880 40.000 13.12 3.29 0.00 1.78
549 2410 5.120208 GTGCACGCTGATATCGGTAAAATAT 59.880 40.000 13.12 0.00 0.00 1.28
550 2411 4.446385 GTGCACGCTGATATCGGTAAAATA 59.554 41.667 13.12 0.00 0.00 1.40
551 2412 3.247648 GTGCACGCTGATATCGGTAAAAT 59.752 43.478 13.12 0.00 0.00 1.82
552 2413 2.605818 GTGCACGCTGATATCGGTAAAA 59.394 45.455 13.12 0.00 0.00 1.52
553 2414 2.159156 AGTGCACGCTGATATCGGTAAA 60.159 45.455 12.01 0.00 0.00 2.01
554 2415 1.407618 AGTGCACGCTGATATCGGTAA 59.592 47.619 12.01 0.00 0.00 2.85
555 2416 1.029681 AGTGCACGCTGATATCGGTA 58.970 50.000 12.01 0.00 0.00 4.02
556 2417 0.175760 AAGTGCACGCTGATATCGGT 59.824 50.000 12.01 1.02 0.00 4.69
557 2418 0.578683 CAAGTGCACGCTGATATCGG 59.421 55.000 12.01 7.22 0.00 4.18
558 2419 1.520174 CTCAAGTGCACGCTGATATCG 59.480 52.381 20.54 9.01 0.00 2.92
559 2420 2.544685 ACTCAAGTGCACGCTGATATC 58.455 47.619 20.54 0.00 0.00 1.63
560 2421 2.674852 CAACTCAAGTGCACGCTGATAT 59.325 45.455 20.54 11.97 0.00 1.63
561 2422 2.068519 CAACTCAAGTGCACGCTGATA 58.931 47.619 20.54 4.69 0.00 2.15
562 2423 0.870393 CAACTCAAGTGCACGCTGAT 59.130 50.000 20.54 8.23 0.00 2.90
563 2424 0.461870 ACAACTCAAGTGCACGCTGA 60.462 50.000 19.51 19.51 0.00 4.26
564 2425 0.041839 GACAACTCAAGTGCACGCTG 60.042 55.000 12.01 13.15 0.00 5.18
565 2426 0.179073 AGACAACTCAAGTGCACGCT 60.179 50.000 12.01 0.00 0.00 5.07
566 2427 0.233332 GAGACAACTCAAGTGCACGC 59.767 55.000 12.01 0.00 42.21 5.34
567 2428 1.789464 GAGAGACAACTCAAGTGCACG 59.211 52.381 12.01 0.00 44.79 5.34
568 2429 2.826428 TGAGAGACAACTCAAGTGCAC 58.174 47.619 9.40 9.40 44.79 4.57
588 2449 6.868622 TGTGCAAGTAACCAAACTATTGTTT 58.131 32.000 0.00 0.00 46.20 2.83
589 2450 6.458232 TGTGCAAGTAACCAAACTATTGTT 57.542 33.333 0.00 0.00 38.16 2.83
590 2451 6.458232 TTGTGCAAGTAACCAAACTATTGT 57.542 33.333 0.00 0.00 34.60 2.71
593 2454 8.609176 CGTATATTGTGCAAGTAACCAAACTAT 58.391 33.333 0.00 0.00 0.00 2.12
594 2455 7.413219 GCGTATATTGTGCAAGTAACCAAACTA 60.413 37.037 0.00 0.00 0.00 2.24
595 2456 6.622028 GCGTATATTGTGCAAGTAACCAAACT 60.622 38.462 0.00 0.00 0.00 2.66
596 2457 5.510323 GCGTATATTGTGCAAGTAACCAAAC 59.490 40.000 0.00 0.00 0.00 2.93
597 2458 5.632959 GCGTATATTGTGCAAGTAACCAAA 58.367 37.500 0.00 0.00 0.00 3.28
598 2459 4.201734 CGCGTATATTGTGCAAGTAACCAA 60.202 41.667 0.00 0.00 0.00 3.67
599 2460 3.307512 CGCGTATATTGTGCAAGTAACCA 59.692 43.478 0.00 0.00 0.00 3.67
600 2461 3.552699 TCGCGTATATTGTGCAAGTAACC 59.447 43.478 5.77 0.00 0.00 2.85
601 2462 4.317839 CCTCGCGTATATTGTGCAAGTAAC 60.318 45.833 5.77 0.00 0.00 2.50
602 2463 3.799963 CCTCGCGTATATTGTGCAAGTAA 59.200 43.478 5.77 0.00 0.00 2.24
603 2464 3.181484 ACCTCGCGTATATTGTGCAAGTA 60.181 43.478 5.77 0.00 0.00 2.24
604 2465 2.201732 CCTCGCGTATATTGTGCAAGT 58.798 47.619 5.77 0.00 0.00 3.16
605 2466 2.201732 ACCTCGCGTATATTGTGCAAG 58.798 47.619 5.77 0.00 0.00 4.01
606 2467 2.159156 AGACCTCGCGTATATTGTGCAA 60.159 45.455 5.77 0.00 0.00 4.08
607 2468 1.407618 AGACCTCGCGTATATTGTGCA 59.592 47.619 5.77 0.00 0.00 4.57
608 2469 2.135664 AGACCTCGCGTATATTGTGC 57.864 50.000 5.77 0.00 0.00 4.57
609 2470 2.794910 CCAAGACCTCGCGTATATTGTG 59.205 50.000 5.77 0.00 0.00 3.33
610 2471 2.223971 CCCAAGACCTCGCGTATATTGT 60.224 50.000 5.77 0.00 0.00 2.71
611 2472 2.035449 TCCCAAGACCTCGCGTATATTG 59.965 50.000 5.77 6.70 0.00 1.90
612 2473 2.313317 TCCCAAGACCTCGCGTATATT 58.687 47.619 5.77 0.00 0.00 1.28
613 2474 1.991121 TCCCAAGACCTCGCGTATAT 58.009 50.000 5.77 0.00 0.00 0.86
614 2475 1.884579 GATCCCAAGACCTCGCGTATA 59.115 52.381 5.77 0.00 0.00 1.47
615 2476 0.674534 GATCCCAAGACCTCGCGTAT 59.325 55.000 5.77 0.00 0.00 3.06
616 2477 1.389609 GGATCCCAAGACCTCGCGTA 61.390 60.000 5.77 0.00 0.00 4.42
617 2478 2.722201 GGATCCCAAGACCTCGCGT 61.722 63.158 5.77 0.00 0.00 6.01
618 2479 1.961180 AAGGATCCCAAGACCTCGCG 61.961 60.000 8.55 0.00 33.16 5.87
619 2480 0.253327 AAAGGATCCCAAGACCTCGC 59.747 55.000 8.55 0.00 33.16 5.03
620 2481 3.906720 TTAAAGGATCCCAAGACCTCG 57.093 47.619 8.55 0.00 33.16 4.63
643 2504 3.957497 TCTGCCCTTATGTGTGTGTTTTT 59.043 39.130 0.00 0.00 0.00 1.94
644 2505 3.317993 GTCTGCCCTTATGTGTGTGTTTT 59.682 43.478 0.00 0.00 0.00 2.43
645 2506 2.884639 GTCTGCCCTTATGTGTGTGTTT 59.115 45.455 0.00 0.00 0.00 2.83
646 2507 2.158682 TGTCTGCCCTTATGTGTGTGTT 60.159 45.455 0.00 0.00 0.00 3.32
647 2508 1.419762 TGTCTGCCCTTATGTGTGTGT 59.580 47.619 0.00 0.00 0.00 3.72
648 2509 1.806542 GTGTCTGCCCTTATGTGTGTG 59.193 52.381 0.00 0.00 0.00 3.82
649 2510 1.608025 CGTGTCTGCCCTTATGTGTGT 60.608 52.381 0.00 0.00 0.00 3.72
650 2511 1.078709 CGTGTCTGCCCTTATGTGTG 58.921 55.000 0.00 0.00 0.00 3.82
651 2512 0.036388 CCGTGTCTGCCCTTATGTGT 60.036 55.000 0.00 0.00 0.00 3.72
652 2513 0.036388 ACCGTGTCTGCCCTTATGTG 60.036 55.000 0.00 0.00 0.00 3.21
653 2514 0.249398 GACCGTGTCTGCCCTTATGT 59.751 55.000 0.00 0.00 0.00 2.29
654 2515 0.806102 CGACCGTGTCTGCCCTTATG 60.806 60.000 3.15 0.00 0.00 1.90
655 2516 1.515954 CGACCGTGTCTGCCCTTAT 59.484 57.895 3.15 0.00 0.00 1.73
656 2517 2.642254 CCGACCGTGTCTGCCCTTA 61.642 63.158 3.15 0.00 0.00 2.69
657 2518 4.003788 CCGACCGTGTCTGCCCTT 62.004 66.667 3.15 0.00 0.00 3.95
662 2523 4.373116 CCACCCCGACCGTGTCTG 62.373 72.222 3.15 0.00 0.00 3.51
668 2529 4.096003 AAGATGCCACCCCGACCG 62.096 66.667 0.00 0.00 0.00 4.79
669 2530 2.438434 CAAGATGCCACCCCGACC 60.438 66.667 0.00 0.00 0.00 4.79
670 2531 1.303317 AACAAGATGCCACCCCGAC 60.303 57.895 0.00 0.00 0.00 4.79
671 2532 1.303236 CAACAAGATGCCACCCCGA 60.303 57.895 0.00 0.00 0.00 5.14
672 2533 2.342650 CCAACAAGATGCCACCCCG 61.343 63.158 0.00 0.00 0.00 5.73
673 2534 2.649129 GCCAACAAGATGCCACCCC 61.649 63.158 0.00 0.00 0.00 4.95
674 2535 1.470996 TTGCCAACAAGATGCCACCC 61.471 55.000 0.00 0.00 0.00 4.61
675 2536 2.048601 TTGCCAACAAGATGCCACC 58.951 52.632 0.00 0.00 0.00 4.61
684 2545 9.646427 GGATTTATTTACATAACTTGCCAACAA 57.354 29.630 0.00 0.00 0.00 2.83
685 2546 9.030452 AGGATTTATTTACATAACTTGCCAACA 57.970 29.630 0.00 0.00 0.00 3.33
686 2547 9.516314 GAGGATTTATTTACATAACTTGCCAAC 57.484 33.333 0.00 0.00 0.00 3.77
687 2548 8.691797 GGAGGATTTATTTACATAACTTGCCAA 58.308 33.333 0.00 0.00 0.00 4.52
688 2549 7.286775 GGGAGGATTTATTTACATAACTTGCCA 59.713 37.037 0.00 0.00 0.00 4.92
689 2550 7.521585 CGGGAGGATTTATTTACATAACTTGCC 60.522 40.741 0.00 0.00 0.00 4.52
690 2551 7.227910 TCGGGAGGATTTATTTACATAACTTGC 59.772 37.037 0.00 0.00 0.00 4.01
691 2552 8.671384 TCGGGAGGATTTATTTACATAACTTG 57.329 34.615 0.00 0.00 0.00 3.16
692 2553 8.904099 CTCGGGAGGATTTATTTACATAACTT 57.096 34.615 0.00 0.00 0.00 2.66
710 2571 1.762460 ATGTAGGGTGCCTCGGGAG 60.762 63.158 0.00 0.00 34.61 4.30
711 2572 2.063979 CATGTAGGGTGCCTCGGGA 61.064 63.158 0.00 0.00 34.61 5.14
712 2573 1.622607 TTCATGTAGGGTGCCTCGGG 61.623 60.000 0.00 0.00 34.61 5.14
713 2574 0.469917 ATTCATGTAGGGTGCCTCGG 59.530 55.000 0.00 0.00 34.61 4.63
714 2575 1.138859 TGATTCATGTAGGGTGCCTCG 59.861 52.381 0.00 0.00 34.61 4.63
715 2576 2.092968 TGTGATTCATGTAGGGTGCCTC 60.093 50.000 0.00 0.00 34.61 4.70
716 2577 1.915489 TGTGATTCATGTAGGGTGCCT 59.085 47.619 0.00 0.00 37.71 4.75
717 2578 2.292267 CTGTGATTCATGTAGGGTGCC 58.708 52.381 0.00 0.00 0.00 5.01
718 2579 2.991250 ACTGTGATTCATGTAGGGTGC 58.009 47.619 0.00 0.00 0.00 5.01
719 2580 7.050377 AGAAATACTGTGATTCATGTAGGGTG 58.950 38.462 9.19 0.00 0.00 4.61
720 2581 7.200434 AGAAATACTGTGATTCATGTAGGGT 57.800 36.000 9.19 0.00 0.00 4.34
721 2582 9.212641 CATAGAAATACTGTGATTCATGTAGGG 57.787 37.037 9.19 0.00 39.56 3.53
722 2583 9.987272 TCATAGAAATACTGTGATTCATGTAGG 57.013 33.333 9.19 0.00 40.77 3.18
743 2604 9.859427 TGCAGAAAATTTTGGATAGTTTCATAG 57.141 29.630 8.47 0.00 31.94 2.23
745 2606 9.558396 TTTGCAGAAAATTTTGGATAGTTTCAT 57.442 25.926 8.47 0.00 31.94 2.57
746 2607 8.954950 TTTGCAGAAAATTTTGGATAGTTTCA 57.045 26.923 8.47 0.00 31.94 2.69
760 2621 9.786105 AAATTCGAACAAAAATTTGCAGAAAAT 57.214 22.222 0.00 0.00 41.79 1.82
761 2622 9.059485 CAAATTCGAACAAAAATTTGCAGAAAA 57.941 25.926 0.00 0.00 42.55 2.29
762 2623 8.446273 TCAAATTCGAACAAAAATTTGCAGAAA 58.554 25.926 12.59 0.00 45.74 2.52
763 2624 7.968246 TCAAATTCGAACAAAAATTTGCAGAA 58.032 26.923 12.59 9.02 45.74 3.02
764 2625 7.254387 CCTCAAATTCGAACAAAAATTTGCAGA 60.254 33.333 12.59 1.10 45.74 4.26
765 2626 6.847289 CCTCAAATTCGAACAAAAATTTGCAG 59.153 34.615 12.59 10.87 45.74 4.41
766 2627 6.238320 CCCTCAAATTCGAACAAAAATTTGCA 60.238 34.615 12.59 0.00 45.74 4.08
767 2628 6.018343 TCCCTCAAATTCGAACAAAAATTTGC 60.018 34.615 12.59 0.00 45.74 3.68
768 2629 7.344441 GTCCCTCAAATTCGAACAAAAATTTG 58.656 34.615 0.00 6.66 46.72 2.32
769 2630 6.200097 CGTCCCTCAAATTCGAACAAAAATTT 59.800 34.615 0.00 0.00 35.91 1.82
770 2631 5.689961 CGTCCCTCAAATTCGAACAAAAATT 59.310 36.000 0.00 0.00 0.00 1.82
771 2632 5.219633 CGTCCCTCAAATTCGAACAAAAAT 58.780 37.500 0.00 0.00 0.00 1.82
772 2633 4.602995 CGTCCCTCAAATTCGAACAAAAA 58.397 39.130 0.00 0.00 0.00 1.94
773 2634 3.549221 GCGTCCCTCAAATTCGAACAAAA 60.549 43.478 0.00 0.00 0.00 2.44
774 2635 2.031508 GCGTCCCTCAAATTCGAACAAA 60.032 45.455 0.00 0.00 0.00 2.83
775 2636 1.533731 GCGTCCCTCAAATTCGAACAA 59.466 47.619 0.00 0.00 0.00 2.83
776 2637 1.153353 GCGTCCCTCAAATTCGAACA 58.847 50.000 0.00 0.00 0.00 3.18
777 2638 1.153353 TGCGTCCCTCAAATTCGAAC 58.847 50.000 0.00 0.00 0.00 3.95
778 2639 2.107950 ATGCGTCCCTCAAATTCGAA 57.892 45.000 0.00 0.00 0.00 3.71
779 2640 2.107950 AATGCGTCCCTCAAATTCGA 57.892 45.000 0.00 0.00 0.00 3.71
780 2641 5.862924 ATATAATGCGTCCCTCAAATTCG 57.137 39.130 0.00 0.00 0.00 3.34
781 2642 9.378551 TGTATATATAATGCGTCCCTCAAATTC 57.621 33.333 0.00 0.00 0.00 2.17
782 2643 9.733556 TTGTATATATAATGCGTCCCTCAAATT 57.266 29.630 0.00 0.00 0.00 1.82
783 2644 9.733556 TTTGTATATATAATGCGTCCCTCAAAT 57.266 29.630 0.00 0.00 0.00 2.32
784 2645 9.562408 TTTTGTATATATAATGCGTCCCTCAAA 57.438 29.630 0.00 0.00 0.00 2.69
785 2646 9.562408 TTTTTGTATATATAATGCGTCCCTCAA 57.438 29.630 0.00 0.00 0.00 3.02
811 2672 4.082463 TCTGTTTGAAACGCAGGTCTTTTT 60.082 37.500 3.37 0.00 0.00 1.94
812 2673 3.442273 TCTGTTTGAAACGCAGGTCTTTT 59.558 39.130 3.37 0.00 0.00 2.27
813 2674 3.013921 TCTGTTTGAAACGCAGGTCTTT 58.986 40.909 3.37 0.00 0.00 2.52
814 2675 2.614057 CTCTGTTTGAAACGCAGGTCTT 59.386 45.455 3.37 0.00 0.00 3.01
815 2676 2.213499 CTCTGTTTGAAACGCAGGTCT 58.787 47.619 3.37 0.00 0.00 3.85
816 2677 1.334149 GCTCTGTTTGAAACGCAGGTC 60.334 52.381 3.37 0.00 0.00 3.85
817 2678 0.663153 GCTCTGTTTGAAACGCAGGT 59.337 50.000 3.37 0.00 0.00 4.00
818 2679 0.947244 AGCTCTGTTTGAAACGCAGG 59.053 50.000 3.37 0.00 0.00 4.85
819 2680 1.599071 TCAGCTCTGTTTGAAACGCAG 59.401 47.619 3.37 2.94 0.00 5.18
820 2681 1.330521 GTCAGCTCTGTTTGAAACGCA 59.669 47.619 3.37 0.00 0.00 5.24
821 2682 1.657538 CGTCAGCTCTGTTTGAAACGC 60.658 52.381 3.37 1.10 0.00 4.84
822 2683 1.070577 CCGTCAGCTCTGTTTGAAACG 60.071 52.381 3.37 0.00 0.00 3.60
823 2684 2.210116 TCCGTCAGCTCTGTTTGAAAC 58.790 47.619 0.14 0.14 0.00 2.78
824 2685 2.613026 TCCGTCAGCTCTGTTTGAAA 57.387 45.000 0.00 0.00 0.00 2.69
825 2686 2.613026 TTCCGTCAGCTCTGTTTGAA 57.387 45.000 0.00 0.00 0.00 2.69
826 2687 2.613026 TTTCCGTCAGCTCTGTTTGA 57.387 45.000 0.00 0.00 0.00 2.69
827 2688 2.095567 CCATTTCCGTCAGCTCTGTTTG 60.096 50.000 0.00 0.00 0.00 2.93
828 2689 2.154462 CCATTTCCGTCAGCTCTGTTT 58.846 47.619 0.00 0.00 0.00 2.83
829 2690 1.611673 CCCATTTCCGTCAGCTCTGTT 60.612 52.381 0.00 0.00 0.00 3.16
830 2691 0.036010 CCCATTTCCGTCAGCTCTGT 60.036 55.000 0.00 0.00 0.00 3.41
831 2692 1.372087 GCCCATTTCCGTCAGCTCTG 61.372 60.000 0.00 0.00 0.00 3.35
832 2693 1.078143 GCCCATTTCCGTCAGCTCT 60.078 57.895 0.00 0.00 0.00 4.09
833 2694 2.115291 GGCCCATTTCCGTCAGCTC 61.115 63.158 0.00 0.00 0.00 4.09
834 2695 2.044946 GGCCCATTTCCGTCAGCT 60.045 61.111 0.00 0.00 0.00 4.24
835 2696 2.044946 AGGCCCATTTCCGTCAGC 60.045 61.111 0.00 0.00 0.00 4.26
836 2697 1.452108 GGAGGCCCATTTCCGTCAG 60.452 63.158 0.00 0.00 0.00 3.51
837 2698 1.497309 AAGGAGGCCCATTTCCGTCA 61.497 55.000 0.00 0.00 38.54 4.35
838 2699 0.323451 AAAGGAGGCCCATTTCCGTC 60.323 55.000 0.00 0.00 38.54 4.79
839 2700 0.611896 CAAAGGAGGCCCATTTCCGT 60.612 55.000 0.00 0.00 38.54 4.69
840 2701 0.323360 TCAAAGGAGGCCCATTTCCG 60.323 55.000 0.00 0.00 38.54 4.30
844 2705 3.188880 TGAATTCAAAGGAGGCCCATT 57.811 42.857 5.45 0.00 33.88 3.16
856 2717 2.397044 AGGTGGGCCTTTGAATTCAA 57.603 45.000 16.91 16.91 44.18 2.69
900 2764 2.203728 AGCCCGTGGACCACAGTA 60.204 61.111 24.18 0.00 33.40 2.74
916 2780 2.822399 CGGAGGAAATCGGGGGAG 59.178 66.667 0.00 0.00 0.00 4.30
1191 3066 0.478507 GAGAGAGGGAGAGGGAGAGG 59.521 65.000 0.00 0.00 0.00 3.69
1197 3094 2.370189 GAGAGAGAGAGAGAGGGAGAGG 59.630 59.091 0.00 0.00 0.00 3.69
1202 3099 3.312890 AGAGAGAGAGAGAGAGAGAGGG 58.687 54.545 0.00 0.00 0.00 4.30
1203 3100 4.222336 AGAGAGAGAGAGAGAGAGAGAGG 58.778 52.174 0.00 0.00 0.00 3.69
1236 3509 0.930310 CGCGTCAGAGAGAGAGAGAG 59.070 60.000 0.00 0.00 0.00 3.20
1237 3510 1.087202 GCGCGTCAGAGAGAGAGAGA 61.087 60.000 8.43 0.00 0.00 3.10
1239 3512 0.955919 TTGCGCGTCAGAGAGAGAGA 60.956 55.000 8.43 0.00 0.00 3.10
1241 3514 0.109551 CTTTGCGCGTCAGAGAGAGA 60.110 55.000 8.43 0.00 0.00 3.10
1242 3515 1.681945 GCTTTGCGCGTCAGAGAGAG 61.682 60.000 19.77 9.09 0.00 3.20
1243 3516 1.734477 GCTTTGCGCGTCAGAGAGA 60.734 57.895 19.77 0.00 0.00 3.10
1244 3517 2.774774 GCTTTGCGCGTCAGAGAG 59.225 61.111 19.77 12.64 0.00 3.20
1263 3536 1.067495 AGACGGCGGAAGAAAGAGAAG 60.067 52.381 13.24 0.00 0.00 2.85
1269 3542 0.319555 CAGACAGACGGCGGAAGAAA 60.320 55.000 13.24 0.00 0.00 2.52
1285 3558 1.871126 CGGCTGAGCAGACAGACAGA 61.871 60.000 6.82 0.00 45.30 3.41
1286 3559 1.445754 CGGCTGAGCAGACAGACAG 60.446 63.158 6.82 0.00 45.30 3.51
1287 3560 1.903404 TCGGCTGAGCAGACAGACA 60.903 57.895 6.82 0.00 45.30 3.41
1440 3713 7.928908 TCAATTCAGCATAACTTTTTGTGAC 57.071 32.000 0.00 0.00 0.00 3.67
1469 3742 2.825086 AGCAAATAACAATCGCGACC 57.175 45.000 12.93 0.00 0.00 4.79
1472 3745 2.660715 TGCAAAGCAAATAACAATCGCG 59.339 40.909 0.00 0.00 34.76 5.87
1488 3761 1.891919 GTCAGCCACGACCTGCAAA 60.892 57.895 0.00 0.00 0.00 3.68
1538 3811 3.189287 GGCACCTACAATGACACTGAAAG 59.811 47.826 0.00 0.00 42.29 2.62
1657 3947 5.941647 TGTTATTACCCAAGTCTGGCTTTAC 59.058 40.000 0.00 0.00 41.99 2.01
1679 3969 6.827727 AGGTGTTCAAGTTCAATACTAGTGT 58.172 36.000 5.39 0.00 35.54 3.55
1680 3970 8.827177 TTAGGTGTTCAAGTTCAATACTAGTG 57.173 34.615 5.39 0.00 35.54 2.74
1732 4022 7.830739 AGAGGATGTTATTTGATTTGTTCCAC 58.169 34.615 0.00 0.00 0.00 4.02
1932 4265 6.693315 TTAAACAAGAAAACAGGAGTGGAG 57.307 37.500 0.00 0.00 0.00 3.86
1972 4305 5.412904 GGAAAACAGGAGTGGAATAGACAAG 59.587 44.000 0.00 0.00 0.00 3.16
2062 4395 2.867109 ACTTGAGGTCAACTCCCATG 57.133 50.000 0.00 0.00 46.01 3.66
2112 4445 3.146066 TCCCAGCAAGTGTCACAATTAC 58.854 45.455 5.62 0.00 0.00 1.89
2183 4516 7.195374 TCAAATAAATGGGAGTAGCTACACT 57.805 36.000 25.28 7.85 0.00 3.55
2359 4693 4.520874 TGCCGAACTTCATTTCCAATTGTA 59.479 37.500 4.43 0.00 0.00 2.41
2550 4885 8.204836 GGTCCATAGTTTACTGTGATTCATACT 58.795 37.037 8.04 0.00 37.28 2.12
2551 4886 8.204836 AGGTCCATAGTTTACTGTGATTCATAC 58.795 37.037 8.04 0.00 37.28 2.39
2552 4887 8.204160 CAGGTCCATAGTTTACTGTGATTCATA 58.796 37.037 8.04 0.00 37.28 2.15
2794 5130 7.538575 ACCACTGCATGAAGAAACATAATTAC 58.461 34.615 8.02 0.00 0.00 1.89
2897 5236 6.293626 CCCATATGCAGTCTATAAGCAACAAC 60.294 42.308 0.00 0.00 42.15 3.32
2905 5262 6.352996 CCATAAGCCCCATATGCAGTCTATAA 60.353 42.308 0.00 0.00 30.91 0.98
2912 5269 2.165167 CACCATAAGCCCCATATGCAG 58.835 52.381 0.00 0.00 30.91 4.41
2915 5272 1.203038 TGCCACCATAAGCCCCATATG 60.203 52.381 0.00 0.00 0.00 1.78
2919 5276 1.000233 CTTGCCACCATAAGCCCCA 60.000 57.895 0.00 0.00 0.00 4.96
2983 5340 4.038402 CCCATCTGGAAATAATGGTCAAGC 59.962 45.833 0.00 0.00 38.63 4.01
3017 5374 2.167075 CAGCATGAATCCCAACCTTTCC 59.833 50.000 0.00 0.00 39.69 3.13
3060 5417 6.940867 ACCTGAATAGTGAAGGTAAAAGGAAC 59.059 38.462 0.00 0.00 42.59 3.62
3207 5564 4.991687 GGATACTATTACAGGAAGCTGCAC 59.008 45.833 1.02 0.00 0.00 4.57
3260 5617 2.156917 CTTGGTGAGCAGCTCATTTGA 58.843 47.619 27.86 13.21 42.73 2.69
3319 5676 1.322442 GGCAGCTCCACTTTGTTTCT 58.678 50.000 0.00 0.00 34.01 2.52
3423 5780 5.503683 GCAAGAAGCAGATTGTACAGCATAG 60.504 44.000 7.48 0.00 44.79 2.23
3674 6031 3.313526 ACAGTTCAGAACAAGATGTGCAC 59.686 43.478 15.85 10.75 0.00 4.57
3812 6170 2.029290 TCTTCAGCCGACTAAACAGGAC 60.029 50.000 0.00 0.00 0.00 3.85
3827 6185 4.279169 TGCTTCCCTCACATTTTTCTTCAG 59.721 41.667 0.00 0.00 0.00 3.02
3840 6198 1.656587 ACCTACATGTGCTTCCCTCA 58.343 50.000 9.11 0.00 0.00 3.86
3861 6219 7.596621 GTGTTGACTGTTTACCTACTTACTACC 59.403 40.741 0.00 0.00 0.00 3.18
3918 6276 0.179056 TCATTTAGGTAGGCAGGCGC 60.179 55.000 0.00 0.00 37.44 6.53
3943 6301 3.698029 ATGGTTGCATAAATCTGTCGC 57.302 42.857 0.00 0.00 0.00 5.19
4001 6359 5.753438 GGACATCCAAGGTTTGAAAAACTTC 59.247 40.000 3.08 0.00 43.70 3.01
4100 6458 2.004017 ACGCAACGACAAAGAGACAAA 58.996 42.857 0.00 0.00 0.00 2.83
4101 6459 1.326245 CACGCAACGACAAAGAGACAA 59.674 47.619 0.00 0.00 0.00 3.18
4102 6460 0.927537 CACGCAACGACAAAGAGACA 59.072 50.000 0.00 0.00 0.00 3.41
4103 6461 0.928229 ACACGCAACGACAAAGAGAC 59.072 50.000 0.00 0.00 0.00 3.36
4104 6462 2.390938 CTACACGCAACGACAAAGAGA 58.609 47.619 0.00 0.00 0.00 3.10
4215 6573 4.946157 AGATGACTGATTTTAAGCCACAGG 59.054 41.667 0.00 0.00 33.57 4.00
4223 6581 8.102676 TGACAGGATTGAGATGACTGATTTTAA 58.897 33.333 0.00 0.00 33.57 1.52
4229 6591 4.622457 GCTTGACAGGATTGAGATGACTGA 60.622 45.833 0.00 0.00 33.57 3.41
4232 6683 3.603532 TGCTTGACAGGATTGAGATGAC 58.396 45.455 0.00 0.00 0.00 3.06
4245 6696 5.312895 ACAAGGTTACATACATGCTTGACA 58.687 37.500 6.60 0.00 32.29 3.58
4286 6737 1.339438 GGGATCACAGAGCTGCAGAAA 60.339 52.381 20.43 0.00 0.00 2.52
4288 6739 1.903294 GGGATCACAGAGCTGCAGA 59.097 57.895 20.43 0.00 0.00 4.26
4494 6953 6.776116 ACCATTTAGTTCTGCATGATCATCAT 59.224 34.615 4.86 0.00 37.65 2.45
4530 6989 8.650143 AAACTGGGTATCAAAGAACAATGTAT 57.350 30.769 0.00 0.00 0.00 2.29
4591 7149 1.202359 TGTGCTGGAAAAAGAAACCGC 60.202 47.619 0.00 0.00 0.00 5.68
4592 7150 2.099098 AGTGTGCTGGAAAAAGAAACCG 59.901 45.455 0.00 0.00 0.00 4.44
4647 7456 3.395639 TCGGACATGGTTCTACAAACAC 58.604 45.455 0.00 0.00 29.68 3.32
4726 7535 8.415950 TTGGACAACAAGTAATATGGATTGTT 57.584 30.769 6.60 6.60 44.41 2.83
4740 7549 4.750098 AGATACGTCTGTTTGGACAACAAG 59.250 41.667 0.00 0.00 35.18 3.16
4745 7554 4.142752 CGTCTAGATACGTCTGTTTGGACA 60.143 45.833 0.00 0.00 38.07 4.02
4747 7556 4.611310 CGTCTAGATACGTCTGTTTGGA 57.389 45.455 0.00 0.00 38.07 3.53
4775 7584 5.351465 CGCTCAAACTGATGTATTTACCACT 59.649 40.000 0.00 0.00 0.00 4.00
4786 7595 4.664139 CGTTACTTGTCGCTCAAACTGATG 60.664 45.833 0.00 0.00 35.48 3.07
4790 7599 2.538449 CACGTTACTTGTCGCTCAAACT 59.462 45.455 0.00 0.00 35.48 2.66
4809 7618 3.090532 AAGGGCCCTCCGATCCAC 61.091 66.667 28.84 0.00 41.52 4.02
4830 7639 6.426587 ACTTGTTGCTCAAACCTATCCATAT 58.573 36.000 0.00 0.00 38.06 1.78
4831 7640 5.815581 ACTTGTTGCTCAAACCTATCCATA 58.184 37.500 0.00 0.00 38.06 2.74
4832 7641 4.666512 ACTTGTTGCTCAAACCTATCCAT 58.333 39.130 0.00 0.00 38.06 3.41
4834 7643 6.759497 ATTACTTGTTGCTCAAACCTATCC 57.241 37.500 0.00 0.00 38.06 2.59
4835 7644 9.109393 TCATATTACTTGTTGCTCAAACCTATC 57.891 33.333 0.00 0.00 38.06 2.08
4836 7645 9.113838 CTCATATTACTTGTTGCTCAAACCTAT 57.886 33.333 0.00 0.00 38.06 2.57
4837 7646 7.065803 GCTCATATTACTTGTTGCTCAAACCTA 59.934 37.037 0.00 0.00 38.06 3.08
4838 7647 6.127897 GCTCATATTACTTGTTGCTCAAACCT 60.128 38.462 0.00 0.00 38.06 3.50
4839 7648 6.030228 GCTCATATTACTTGTTGCTCAAACC 58.970 40.000 0.00 0.00 38.06 3.27
4840 7649 6.030228 GGCTCATATTACTTGTTGCTCAAAC 58.970 40.000 0.00 0.00 39.41 2.93
4841 7650 5.709631 TGGCTCATATTACTTGTTGCTCAAA 59.290 36.000 0.00 0.00 35.48 2.69
4842 7651 5.252547 TGGCTCATATTACTTGTTGCTCAA 58.747 37.500 0.00 0.00 34.61 3.02
4843 7652 4.842574 TGGCTCATATTACTTGTTGCTCA 58.157 39.130 0.00 0.00 0.00 4.26
4844 7653 5.118990 TCTGGCTCATATTACTTGTTGCTC 58.881 41.667 0.00 0.00 0.00 4.26
4845 7654 5.102953 TCTGGCTCATATTACTTGTTGCT 57.897 39.130 0.00 0.00 0.00 3.91
4846 7655 5.118990 TCTCTGGCTCATATTACTTGTTGC 58.881 41.667 0.00 0.00 0.00 4.17
4847 7656 7.615582 TTTCTCTGGCTCATATTACTTGTTG 57.384 36.000 0.00 0.00 0.00 3.33
4848 7657 8.814038 AATTTCTCTGGCTCATATTACTTGTT 57.186 30.769 0.00 0.00 0.00 2.83
4849 7658 9.905713 TTAATTTCTCTGGCTCATATTACTTGT 57.094 29.630 0.00 0.00 0.00 3.16
4851 7660 9.905713 TGTTAATTTCTCTGGCTCATATTACTT 57.094 29.630 0.00 0.00 0.00 2.24
4852 7661 9.331282 GTGTTAATTTCTCTGGCTCATATTACT 57.669 33.333 0.00 0.00 0.00 2.24
4853 7662 9.109393 TGTGTTAATTTCTCTGGCTCATATTAC 57.891 33.333 0.00 0.00 0.00 1.89
4854 7663 9.679661 TTGTGTTAATTTCTCTGGCTCATATTA 57.320 29.630 0.00 0.00 0.00 0.98
4855 7664 8.579850 TTGTGTTAATTTCTCTGGCTCATATT 57.420 30.769 0.00 0.00 0.00 1.28
4856 7665 8.579850 TTTGTGTTAATTTCTCTGGCTCATAT 57.420 30.769 0.00 0.00 0.00 1.78
4857 7666 7.362056 GCTTTGTGTTAATTTCTCTGGCTCATA 60.362 37.037 0.00 0.00 0.00 2.15
4858 7667 6.571150 GCTTTGTGTTAATTTCTCTGGCTCAT 60.571 38.462 0.00 0.00 0.00 2.90
4917 7726 3.106242 TGTATACGCAATGCCCACTAG 57.894 47.619 0.00 0.00 0.00 2.57
4918 7727 3.070302 TCATGTATACGCAATGCCCACTA 59.930 43.478 0.00 0.00 0.00 2.74
4919 7728 2.158827 TCATGTATACGCAATGCCCACT 60.159 45.455 0.00 0.00 0.00 4.00
4920 7729 2.217750 TCATGTATACGCAATGCCCAC 58.782 47.619 0.00 0.00 0.00 4.61
4921 7730 2.103941 TCTCATGTATACGCAATGCCCA 59.896 45.455 0.00 0.00 0.00 5.36
4922 7731 2.766313 TCTCATGTATACGCAATGCCC 58.234 47.619 0.00 0.00 0.00 5.36
4930 7739 6.856426 TCATTTACGCTCTTCTCATGTATACG 59.144 38.462 0.00 0.00 0.00 3.06
4936 7745 5.980698 ATGTCATTTACGCTCTTCTCATG 57.019 39.130 0.00 0.00 0.00 3.07
4941 7750 5.043903 TGAGCTATGTCATTTACGCTCTTC 58.956 41.667 18.53 3.94 43.06 2.87
4947 7756 6.199154 CCACTAGTTGAGCTATGTCATTTACG 59.801 42.308 0.00 0.00 0.00 3.18
4967 7776 4.698304 GCAGTAACTGTTTATTGGCCACTA 59.302 41.667 3.88 0.02 33.43 2.74
4988 7797 9.371136 TGTTCTTGTGTGTTTAATATTTTTGCA 57.629 25.926 0.00 0.00 0.00 4.08
5008 7817 9.899226 GTAGTTGCAAATAATCTTCTTGTTCTT 57.101 29.630 8.39 0.00 0.00 2.52
5027 7836 4.988540 TGTGTGTTGATGACTAGTAGTTGC 59.011 41.667 3.85 0.00 0.00 4.17
5028 7837 7.011016 TGTTTGTGTGTTGATGACTAGTAGTTG 59.989 37.037 3.85 0.00 0.00 3.16
5029 7838 7.045416 TGTTTGTGTGTTGATGACTAGTAGTT 58.955 34.615 3.85 0.00 0.00 2.24
5039 7853 4.804665 TGCATTTCTGTTTGTGTGTTGATG 59.195 37.500 0.00 0.00 0.00 3.07
5042 7856 4.804665 TGATGCATTTCTGTTTGTGTGTTG 59.195 37.500 0.00 0.00 0.00 3.33
5067 7881 9.476202 GATTTATCTACCTGTTTGCTTGTTTTT 57.524 29.630 0.00 0.00 0.00 1.94
5086 7900 4.980590 TGTGCGTGGTTCATTGATTTATC 58.019 39.130 0.00 0.00 0.00 1.75
5097 7911 2.939022 GCAGACTGTGCGTGGTTC 59.061 61.111 3.99 0.00 43.99 3.62
5107 7921 2.576083 GATCGAAGAGCGCAGACTG 58.424 57.895 11.47 0.00 43.63 3.51
5116 7930 1.009449 GACGAGGCCGATCGAAGAG 60.009 63.158 20.15 6.36 45.56 2.85
5117 7931 1.030488 AAGACGAGGCCGATCGAAGA 61.030 55.000 20.15 0.00 45.56 2.87
5118 7932 0.592754 GAAGACGAGGCCGATCGAAG 60.593 60.000 20.15 1.12 45.56 3.79
5119 7933 1.432251 GAAGACGAGGCCGATCGAA 59.568 57.895 20.15 0.00 45.56 3.71
5145 7974 4.648917 GATCACAAGCATGAGATCATCG 57.351 45.455 19.97 0.00 46.63 3.84
5173 8002 0.603569 GGAGACTCAAGCTTCCGACA 59.396 55.000 4.53 0.00 0.00 4.35
5273 8102 2.261215 CAAGAGCTTGGGTGAAGGC 58.739 57.895 2.30 0.00 36.95 4.35
5346 8175 1.523938 GGAAGCTCATGTACCGGGC 60.524 63.158 6.32 0.00 0.00 6.13
5361 8190 2.126228 CCGTAAGACGCGCTGGAA 60.126 61.111 5.73 0.00 40.91 3.53
5376 8205 2.511600 GATGACTTGGCCGGACCG 60.512 66.667 3.83 6.99 43.94 4.79
5385 8214 1.712081 CTTCCGCTGCGATGACTTG 59.288 57.895 25.45 4.61 0.00 3.16
5386 8215 2.103042 GCTTCCGCTGCGATGACTT 61.103 57.895 25.45 0.00 0.00 3.01
5387 8216 2.510238 GCTTCCGCTGCGATGACT 60.510 61.111 25.45 0.00 0.00 3.41
5388 8217 1.911293 TTTGCTTCCGCTGCGATGAC 61.911 55.000 25.45 10.69 36.97 3.06
5389 8218 1.638388 CTTTGCTTCCGCTGCGATGA 61.638 55.000 25.45 10.48 36.97 2.92
5390 8219 1.226211 CTTTGCTTCCGCTGCGATG 60.226 57.895 25.45 13.50 36.97 3.84
5391 8220 0.745845 ATCTTTGCTTCCGCTGCGAT 60.746 50.000 25.45 2.09 36.97 4.58
5392 8221 1.361668 GATCTTTGCTTCCGCTGCGA 61.362 55.000 25.45 6.86 36.97 5.10
5393 8222 1.061570 GATCTTTGCTTCCGCTGCG 59.938 57.895 16.34 16.34 36.97 5.18
5394 8223 0.098376 CTGATCTTTGCTTCCGCTGC 59.902 55.000 0.00 0.00 36.97 5.25
5395 8224 1.730501 TCTGATCTTTGCTTCCGCTG 58.269 50.000 0.00 0.00 36.97 5.18
5396 8225 2.354259 CTTCTGATCTTTGCTTCCGCT 58.646 47.619 0.00 0.00 36.97 5.52
5397 8226 1.399791 CCTTCTGATCTTTGCTTCCGC 59.600 52.381 0.00 0.00 0.00 5.54
5398 8227 2.675348 GTCCTTCTGATCTTTGCTTCCG 59.325 50.000 0.00 0.00 0.00 4.30
5399 8228 2.675348 CGTCCTTCTGATCTTTGCTTCC 59.325 50.000 0.00 0.00 0.00 3.46
5400 8229 2.095053 GCGTCCTTCTGATCTTTGCTTC 59.905 50.000 0.00 0.00 0.00 3.86
5401 8230 2.079925 GCGTCCTTCTGATCTTTGCTT 58.920 47.619 0.00 0.00 0.00 3.91
5402 8231 1.277557 AGCGTCCTTCTGATCTTTGCT 59.722 47.619 0.00 0.00 0.00 3.91
5403 8232 1.663135 GAGCGTCCTTCTGATCTTTGC 59.337 52.381 0.00 0.00 0.00 3.68
5404 8233 2.275318 GGAGCGTCCTTCTGATCTTTG 58.725 52.381 0.00 0.00 32.53 2.77
5405 8234 1.134965 CGGAGCGTCCTTCTGATCTTT 60.135 52.381 0.00 0.00 33.30 2.52
5406 8235 0.457851 CGGAGCGTCCTTCTGATCTT 59.542 55.000 0.00 0.00 33.30 2.40
5407 8236 1.388065 CCGGAGCGTCCTTCTGATCT 61.388 60.000 0.00 0.00 33.30 2.75
5408 8237 1.066587 CCGGAGCGTCCTTCTGATC 59.933 63.158 0.00 0.00 33.30 2.92
5409 8238 1.668101 GACCGGAGCGTCCTTCTGAT 61.668 60.000 9.46 0.00 33.30 2.90
5410 8239 2.282958 ACCGGAGCGTCCTTCTGA 60.283 61.111 9.46 0.00 33.30 3.27
5411 8240 2.154798 TTGACCGGAGCGTCCTTCTG 62.155 60.000 9.46 0.00 33.30 3.02
5412 8241 1.469335 TTTGACCGGAGCGTCCTTCT 61.469 55.000 9.46 0.00 33.30 2.85
5413 8242 0.391263 ATTTGACCGGAGCGTCCTTC 60.391 55.000 9.46 0.00 33.30 3.46
5414 8243 0.673644 CATTTGACCGGAGCGTCCTT 60.674 55.000 9.46 0.00 33.30 3.36
5415 8244 1.079127 CATTTGACCGGAGCGTCCT 60.079 57.895 9.46 0.00 33.30 3.85
5416 8245 1.079405 TCATTTGACCGGAGCGTCC 60.079 57.895 9.46 0.00 31.35 4.79
5417 8246 0.108804 TCTCATTTGACCGGAGCGTC 60.109 55.000 9.46 0.00 0.00 5.19
5418 8247 0.389948 GTCTCATTTGACCGGAGCGT 60.390 55.000 9.46 0.00 0.00 5.07
5419 8248 1.413767 CGTCTCATTTGACCGGAGCG 61.414 60.000 9.46 0.00 33.70 5.03
5420 8249 1.696832 GCGTCTCATTTGACCGGAGC 61.697 60.000 9.46 0.00 33.70 4.70
5421 8250 1.084370 GGCGTCTCATTTGACCGGAG 61.084 60.000 9.46 0.00 33.70 4.63
5422 8251 1.079405 GGCGTCTCATTTGACCGGA 60.079 57.895 9.46 0.00 33.70 5.14
5423 8252 0.174845 TAGGCGTCTCATTTGACCGG 59.825 55.000 0.00 0.00 33.70 5.28
5424 8253 1.927174 CTTAGGCGTCTCATTTGACCG 59.073 52.381 0.00 0.00 33.70 4.79
5425 8254 1.666189 GCTTAGGCGTCTCATTTGACC 59.334 52.381 0.00 0.00 33.70 4.02
5426 8255 2.346803 TGCTTAGGCGTCTCATTTGAC 58.653 47.619 0.00 0.00 42.25 3.18
5427 8256 2.760634 TGCTTAGGCGTCTCATTTGA 57.239 45.000 0.00 0.00 42.25 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.