Multiple sequence alignment - TraesCS1A01G415500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G415500 chr1A 100.000 3935 0 0 1 3935 574391751 574395685 0.000000e+00 7267.0
1 TraesCS1A01G415500 chr1A 98.214 448 3 4 1 446 42195286 42195730 0.000000e+00 778.0
2 TraesCS1A01G415500 chr1A 82.456 171 23 5 566 729 364939871 364940041 4.100000e-30 143.0
3 TraesCS1A01G415500 chr1A 100.000 30 0 0 3674 3703 20031567 20031596 5.490000e-04 56.5
4 TraesCS1A01G415500 chr1A 100.000 29 0 0 3674 3702 38730041 38730069 2.000000e-03 54.7
5 TraesCS1A01G415500 chr1B 93.518 1882 112 3 995 2866 665437401 665439282 0.000000e+00 2791.0
6 TraesCS1A01G415500 chr1B 98.869 442 3 1 1 442 666870052 666870491 0.000000e+00 787.0
7 TraesCS1A01G415500 chr1B 90.323 186 12 4 802 986 665437156 665437336 5.080000e-59 239.0
8 TraesCS1A01G415500 chr1B 100.000 29 0 0 3641 3669 174643732 174643760 2.000000e-03 54.7
9 TraesCS1A01G415500 chr1D 93.131 757 40 5 2545 3300 478182122 478182867 0.000000e+00 1099.0
10 TraesCS1A01G415500 chr1D 93.241 725 37 4 996 1708 478180901 478181625 0.000000e+00 1057.0
11 TraesCS1A01G415500 chr1D 90.772 661 25 16 3293 3935 478183678 478184320 0.000000e+00 850.0
12 TraesCS1A01G415500 chr1D 96.802 344 9 1 1 344 409062092 409062433 1.230000e-159 573.0
13 TraesCS1A01G415500 chr1D 95.977 174 6 1 823 996 478180689 478180861 8.320000e-72 281.0
14 TraesCS1A01G415500 chr1D 80.282 284 46 6 448 723 345238559 345238840 5.150000e-49 206.0
15 TraesCS1A01G415500 chr1D 90.598 117 9 1 3696 3810 478235312 478235428 1.890000e-33 154.0
16 TraesCS1A01G415500 chr1D 94.937 79 4 0 3564 3642 478235234 478235312 1.480000e-24 124.0
17 TraesCS1A01G415500 chr1D 92.857 70 4 1 3808 3877 478249277 478249345 2.500000e-17 100.0
18 TraesCS1A01G415500 chr1D 97.222 36 1 0 3634 3669 104527489 104527524 1.180000e-05 62.1
19 TraesCS1A01G415500 chr3A 98.420 443 6 1 1 443 16685454 16685013 0.000000e+00 778.0
20 TraesCS1A01G415500 chr3A 88.793 232 26 0 452 683 480101521 480101752 6.440000e-73 285.0
21 TraesCS1A01G415500 chr3A 93.939 66 4 0 702 767 480101824 480101889 2.500000e-17 100.0
22 TraesCS1A01G415500 chr3A 88.571 70 8 0 370 439 344146126 344146057 7.010000e-13 86.1
23 TraesCS1A01G415500 chr3B 97.315 447 8 2 1 447 711638557 711638999 0.000000e+00 756.0
24 TraesCS1A01G415500 chr3B 82.609 230 30 6 448 676 447974945 447974725 1.120000e-45 195.0
25 TraesCS1A01G415500 chr3B 87.425 167 17 3 440 606 10735626 10735464 5.190000e-44 189.0
26 TraesCS1A01G415500 chr6A 97.303 445 8 3 1 443 86412491 86412933 0.000000e+00 752.0
27 TraesCS1A01G415500 chr6A 95.045 444 4 5 1 442 8207103 8207530 0.000000e+00 682.0
28 TraesCS1A01G415500 chr6A 96.970 33 1 0 3637 3669 59695334 59695366 5.490000e-04 56.5
29 TraesCS1A01G415500 chr2B 97.494 439 6 3 1 437 180065845 180066280 0.000000e+00 745.0
30 TraesCS1A01G415500 chr2B 96.875 32 0 1 3637 3668 258065552 258065522 7.000000e-03 52.8
31 TraesCS1A01G415500 chr5B 98.256 344 6 0 1 344 623819036 623819379 1.560000e-168 603.0
32 TraesCS1A01G415500 chr5B 83.691 233 35 3 447 676 102377411 102377643 2.380000e-52 217.0
33 TraesCS1A01G415500 chr5B 100.000 29 0 0 3674 3702 580833498 580833526 2.000000e-03 54.7
34 TraesCS1A01G415500 chr5B 100.000 29 0 0 3641 3669 610345963 610345991 2.000000e-03 54.7
35 TraesCS1A01G415500 chr7D 84.146 246 35 4 434 676 47847410 47847654 6.570000e-58 235.0
36 TraesCS1A01G415500 chr7D 86.471 170 22 1 448 616 22860544 22860713 6.710000e-43 185.0
37 TraesCS1A01G415500 chr2A 92.500 160 7 1 567 721 242807726 242807567 1.420000e-54 224.0
38 TraesCS1A01G415500 chr2A 100.000 63 0 0 705 767 242807521 242807459 2.480000e-22 117.0
39 TraesCS1A01G415500 chr2A 92.405 79 6 0 689 767 63383881 63383803 3.210000e-21 113.0
40 TraesCS1A01G415500 chr2A 100.000 29 0 0 3675 3703 522506888 522506860 2.000000e-03 54.7
41 TraesCS1A01G415500 chr2A 100.000 29 0 0 3674 3702 670700572 670700544 2.000000e-03 54.7
42 TraesCS1A01G415500 chr3D 81.818 231 31 6 448 676 348150509 348150288 2.420000e-42 183.0
43 TraesCS1A01G415500 chr2D 81.140 228 40 3 452 676 469504934 469504707 3.120000e-41 180.0
44 TraesCS1A01G415500 chr2D 79.747 237 36 10 447 676 469720353 469720122 1.130000e-35 161.0
45 TraesCS1A01G415500 chr2D 94.286 35 0 2 3675 3709 628259956 628259924 7.000000e-03 52.8
46 TraesCS1A01G415500 chr4B 80.000 265 30 10 1222 1476 31877219 31876968 1.450000e-39 174.0
47 TraesCS1A01G415500 chr4B 96.970 33 1 0 3637 3669 368857261 368857293 5.490000e-04 56.5
48 TraesCS1A01G415500 chr4D 79.245 265 32 10 1222 1476 19409520 19409269 3.150000e-36 163.0
49 TraesCS1A01G415500 chr4A 78.909 275 33 12 1207 1470 581481970 581482230 3.150000e-36 163.0
50 TraesCS1A01G415500 chr4A 84.722 72 11 0 370 441 613761508 613761437 5.450000e-09 73.1
51 TraesCS1A01G415500 chr4A 100.000 29 0 0 3674 3702 683428767 683428739 2.000000e-03 54.7
52 TraesCS1A01G415500 chr4A 100.000 28 0 0 3641 3668 511021887 511021860 7.000000e-03 52.8
53 TraesCS1A01G415500 chr4A 100.000 28 0 0 3641 3668 559897515 559897488 7.000000e-03 52.8
54 TraesCS1A01G415500 chrUn 90.816 98 4 2 347 439 455099245 455099342 4.130000e-25 126.0
55 TraesCS1A01G415500 chr6B 89.873 79 8 0 689 767 578462358 578462280 6.960000e-18 102.0
56 TraesCS1A01G415500 chr7B 85.897 78 9 1 689 766 182619144 182619219 9.060000e-12 82.4
57 TraesCS1A01G415500 chr6D 96.970 33 0 1 3675 3706 32920189 32920157 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G415500 chr1A 574391751 574395685 3934 False 7267.00 7267 100.00000 1 3935 1 chr1A.!!$F5 3934
1 TraesCS1A01G415500 chr1B 665437156 665439282 2126 False 1515.00 2791 91.92050 802 2866 2 chr1B.!!$F3 2064
2 TraesCS1A01G415500 chr1D 478180689 478184320 3631 False 821.75 1099 93.28025 823 3935 4 chr1D.!!$F5 3112

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
197 198 0.027979 CGCGCAAGAGAGAGAGAGAG 59.972 60.0 8.75 0.00 40.82 3.20 F
492 493 0.032678 ATCGCAGCTTCTATGTCCGG 59.967 55.0 0.00 0.00 0.00 5.14 F
566 567 0.032952 AACGCGCTTCTACAACAGGA 59.967 50.0 5.73 0.00 0.00 3.86 F
718 719 0.107410 TTCTGCAACAAGACCGGTGT 60.107 50.0 14.63 4.35 0.00 4.16 F
2160 2233 0.107456 ACAGGATGATCGACATGGGC 59.893 55.0 0.00 0.00 39.69 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1290 1350 0.110486 TGGGCTTCTTGTCCTTGGAC 59.890 55.0 12.54 12.54 42.07 4.02 R
2384 2457 0.034896 GACCTTCACCATGACCACGT 59.965 55.0 0.00 0.00 0.00 4.49 R
2406 2479 0.036732 TGAGCCGTGGCATCTTTTCT 59.963 50.0 14.29 0.00 44.88 2.52 R
2409 2482 0.036732 TCTTGAGCCGTGGCATCTTT 59.963 50.0 14.29 0.00 44.88 2.52 R
3447 4380 0.034380 TACTCCTCAGTCCTCACCCG 60.034 60.0 0.00 0.00 33.62 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 3.907927 TCGCCGGCGAATAAAAATG 57.092 47.368 46.56 16.89 46.01 2.32
37 38 0.378962 TCGCCGGCGAATAAAAATGG 59.621 50.000 46.56 16.31 46.01 3.16
38 39 1.206115 CGCCGGCGAATAAAAATGGC 61.206 55.000 44.86 0.83 42.83 4.40
39 40 0.179124 GCCGGCGAATAAAAATGGCA 60.179 50.000 12.58 0.00 40.66 4.92
40 41 1.838913 CCGGCGAATAAAAATGGCAG 58.161 50.000 9.30 0.00 0.00 4.85
41 42 1.199624 CGGCGAATAAAAATGGCAGC 58.800 50.000 0.00 0.00 0.00 5.25
42 43 1.202290 CGGCGAATAAAAATGGCAGCT 60.202 47.619 0.00 0.00 0.00 4.24
43 44 2.735126 CGGCGAATAAAAATGGCAGCTT 60.735 45.455 0.00 0.00 0.00 3.74
44 45 3.261580 GGCGAATAAAAATGGCAGCTTT 58.738 40.909 0.00 0.00 0.00 3.51
45 46 3.062504 GGCGAATAAAAATGGCAGCTTTG 59.937 43.478 6.80 0.00 0.00 2.77
46 47 3.679502 GCGAATAAAAATGGCAGCTTTGT 59.320 39.130 6.80 0.00 0.00 2.83
47 48 4.434593 GCGAATAAAAATGGCAGCTTTGTG 60.435 41.667 6.80 0.00 0.00 3.33
48 49 4.685628 CGAATAAAAATGGCAGCTTTGTGT 59.314 37.500 6.80 0.00 0.00 3.72
49 50 5.388682 CGAATAAAAATGGCAGCTTTGTGTG 60.389 40.000 6.80 0.00 0.00 3.82
50 51 3.540314 AAAAATGGCAGCTTTGTGTGA 57.460 38.095 0.00 0.00 0.00 3.58
51 52 3.540314 AAAATGGCAGCTTTGTGTGAA 57.460 38.095 0.00 0.00 0.00 3.18
52 53 2.514205 AATGGCAGCTTTGTGTGAAC 57.486 45.000 0.00 0.00 0.00 3.18
53 54 0.675633 ATGGCAGCTTTGTGTGAACC 59.324 50.000 0.00 0.00 0.00 3.62
54 55 0.682532 TGGCAGCTTTGTGTGAACCA 60.683 50.000 0.00 0.00 0.00 3.67
55 56 0.031178 GGCAGCTTTGTGTGAACCAG 59.969 55.000 0.00 0.00 0.00 4.00
56 57 0.031178 GCAGCTTTGTGTGAACCAGG 59.969 55.000 0.00 0.00 0.00 4.45
57 58 0.670162 CAGCTTTGTGTGAACCAGGG 59.330 55.000 0.00 0.00 0.00 4.45
58 59 0.258774 AGCTTTGTGTGAACCAGGGT 59.741 50.000 0.00 0.00 0.00 4.34
59 60 0.385390 GCTTTGTGTGAACCAGGGTG 59.615 55.000 0.00 0.00 0.00 4.61
60 61 1.032014 CTTTGTGTGAACCAGGGTGG 58.968 55.000 0.00 0.00 45.02 4.61
70 71 4.039092 CAGGGTGGTGGGGAGCAG 62.039 72.222 0.00 0.00 0.00 4.24
71 72 4.599500 AGGGTGGTGGGGAGCAGT 62.599 66.667 0.00 0.00 0.00 4.40
72 73 4.351054 GGGTGGTGGGGAGCAGTG 62.351 72.222 0.00 0.00 0.00 3.66
73 74 3.249189 GGTGGTGGGGAGCAGTGA 61.249 66.667 0.00 0.00 0.00 3.41
74 75 2.348998 GTGGTGGGGAGCAGTGAG 59.651 66.667 0.00 0.00 0.00 3.51
75 76 3.640407 TGGTGGGGAGCAGTGAGC 61.640 66.667 0.00 0.00 46.19 4.26
101 102 4.838152 GGAGCAAGATGCCGGCGA 62.838 66.667 23.90 11.80 46.52 5.54
102 103 3.267860 GAGCAAGATGCCGGCGAG 61.268 66.667 23.90 10.47 46.52 5.03
103 104 3.723235 GAGCAAGATGCCGGCGAGA 62.723 63.158 23.90 4.21 46.52 4.04
104 105 3.267860 GCAAGATGCCGGCGAGAG 61.268 66.667 23.90 11.64 37.42 3.20
105 106 2.587194 CAAGATGCCGGCGAGAGG 60.587 66.667 23.90 7.45 0.00 3.69
106 107 3.854669 AAGATGCCGGCGAGAGGG 61.855 66.667 23.90 0.00 0.00 4.30
107 108 4.841617 AGATGCCGGCGAGAGGGA 62.842 66.667 23.90 1.41 0.00 4.20
108 109 4.292178 GATGCCGGCGAGAGGGAG 62.292 72.222 23.90 0.00 31.06 4.30
109 110 4.841617 ATGCCGGCGAGAGGGAGA 62.842 66.667 23.90 0.00 31.06 3.71
112 113 2.904866 CCGGCGAGAGGGAGAGAG 60.905 72.222 9.30 0.00 0.00 3.20
113 114 2.190843 CGGCGAGAGGGAGAGAGA 59.809 66.667 0.00 0.00 0.00 3.10
114 115 1.891919 CGGCGAGAGGGAGAGAGAG 60.892 68.421 0.00 0.00 0.00 3.20
115 116 1.528309 GGCGAGAGGGAGAGAGAGG 60.528 68.421 0.00 0.00 0.00 3.69
116 117 1.528309 GCGAGAGGGAGAGAGAGGG 60.528 68.421 0.00 0.00 0.00 4.30
117 118 1.528309 CGAGAGGGAGAGAGAGGGC 60.528 68.421 0.00 0.00 0.00 5.19
118 119 1.528309 GAGAGGGAGAGAGAGGGCG 60.528 68.421 0.00 0.00 0.00 6.13
119 120 3.223589 GAGGGAGAGAGAGGGCGC 61.224 72.222 0.00 0.00 0.00 6.53
120 121 4.067512 AGGGAGAGAGAGGGCGCA 62.068 66.667 10.83 0.00 0.00 6.09
121 122 2.841988 GGGAGAGAGAGGGCGCAT 60.842 66.667 10.83 0.00 0.00 4.73
122 123 2.733945 GGAGAGAGAGGGCGCATC 59.266 66.667 10.83 6.76 0.00 3.91
123 124 2.130426 GGAGAGAGAGGGCGCATCA 61.130 63.158 10.83 0.00 0.00 3.07
124 125 1.680522 GGAGAGAGAGGGCGCATCAA 61.681 60.000 10.83 0.00 0.00 2.57
125 126 0.529555 GAGAGAGAGGGCGCATCAAC 60.530 60.000 10.83 5.43 0.00 3.18
126 127 1.880340 GAGAGAGGGCGCATCAACG 60.880 63.158 10.83 0.00 0.00 4.10
127 128 2.892425 GAGAGGGCGCATCAACGG 60.892 66.667 10.83 0.00 0.00 4.44
128 129 4.473520 AGAGGGCGCATCAACGGG 62.474 66.667 10.83 0.00 0.00 5.28
132 133 4.467084 GGCGCATCAACGGGGAGA 62.467 66.667 10.83 0.00 0.00 3.71
133 134 2.892425 GCGCATCAACGGGGAGAG 60.892 66.667 0.30 0.00 0.00 3.20
134 135 2.892640 CGCATCAACGGGGAGAGA 59.107 61.111 0.00 0.00 0.00 3.10
135 136 1.227089 CGCATCAACGGGGAGAGAG 60.227 63.158 0.00 0.00 0.00 3.20
136 137 1.522580 GCATCAACGGGGAGAGAGC 60.523 63.158 0.00 0.00 0.00 4.09
137 138 1.227089 CATCAACGGGGAGAGAGCG 60.227 63.158 0.00 0.00 0.00 5.03
138 139 2.427245 ATCAACGGGGAGAGAGCGG 61.427 63.158 0.00 0.00 0.00 5.52
139 140 4.821589 CAACGGGGAGAGAGCGGC 62.822 72.222 0.00 0.00 0.00 6.53
160 161 4.605967 GCGCGCGAGAGAGAGAGG 62.606 72.222 37.18 0.00 31.43 3.69
161 162 4.605967 CGCGCGAGAGAGAGAGGC 62.606 72.222 28.94 0.00 31.43 4.70
164 165 2.713154 GCGAGAGAGAGAGGCGAC 59.287 66.667 0.00 0.00 0.00 5.19
166 167 2.013807 CGAGAGAGAGAGGCGACTG 58.986 63.158 0.00 0.00 44.43 3.51
167 168 1.436195 CGAGAGAGAGAGGCGACTGG 61.436 65.000 0.00 0.00 44.43 4.00
168 169 0.393808 GAGAGAGAGAGGCGACTGGT 60.394 60.000 0.00 0.00 44.43 4.00
169 170 0.679640 AGAGAGAGAGGCGACTGGTG 60.680 60.000 0.00 0.00 44.43 4.17
170 171 1.662438 GAGAGAGAGGCGACTGGTGG 61.662 65.000 0.00 0.00 44.43 4.61
171 172 3.363844 GAGAGAGGCGACTGGTGGC 62.364 68.421 0.00 0.00 44.43 5.01
194 195 4.303257 TCGCGCAAGAGAGAGAGA 57.697 55.556 8.75 0.00 42.76 3.10
195 196 2.094060 TCGCGCAAGAGAGAGAGAG 58.906 57.895 8.75 0.00 42.76 3.20
196 197 0.391793 TCGCGCAAGAGAGAGAGAGA 60.392 55.000 8.75 0.00 42.76 3.10
197 198 0.027979 CGCGCAAGAGAGAGAGAGAG 59.972 60.000 8.75 0.00 40.82 3.20
198 199 1.378531 GCGCAAGAGAGAGAGAGAGA 58.621 55.000 0.30 0.00 43.02 3.10
199 200 1.331756 GCGCAAGAGAGAGAGAGAGAG 59.668 57.143 0.30 0.00 43.02 3.20
200 201 1.942657 CGCAAGAGAGAGAGAGAGAGG 59.057 57.143 0.00 0.00 43.02 3.69
201 202 1.678101 GCAAGAGAGAGAGAGAGAGGC 59.322 57.143 0.00 0.00 0.00 4.70
202 203 1.942657 CAAGAGAGAGAGAGAGAGGCG 59.057 57.143 0.00 0.00 0.00 5.52
203 204 1.496060 AGAGAGAGAGAGAGAGGCGA 58.504 55.000 0.00 0.00 0.00 5.54
204 205 1.414181 AGAGAGAGAGAGAGAGGCGAG 59.586 57.143 0.00 0.00 0.00 5.03
205 206 0.179045 AGAGAGAGAGAGAGGCGAGC 60.179 60.000 0.00 0.00 0.00 5.03
206 207 1.498865 GAGAGAGAGAGAGGCGAGCG 61.499 65.000 0.00 0.00 0.00 5.03
207 208 2.515991 AGAGAGAGAGGCGAGCGG 60.516 66.667 0.00 0.00 0.00 5.52
208 209 3.591835 GAGAGAGAGGCGAGCGGG 61.592 72.222 0.00 0.00 0.00 6.13
227 228 3.760673 GCGTCGTGCAAGAGAGAG 58.239 61.111 1.39 0.00 45.45 3.20
228 229 1.210413 GCGTCGTGCAAGAGAGAGA 59.790 57.895 1.39 0.00 45.45 3.10
229 230 0.796491 GCGTCGTGCAAGAGAGAGAG 60.796 60.000 1.39 0.00 45.45 3.20
230 231 0.799393 CGTCGTGCAAGAGAGAGAGA 59.201 55.000 1.39 0.00 0.00 3.10
231 232 1.202020 CGTCGTGCAAGAGAGAGAGAG 60.202 57.143 1.39 0.00 0.00 3.20
232 233 2.080693 GTCGTGCAAGAGAGAGAGAGA 58.919 52.381 1.39 0.00 0.00 3.10
233 234 2.682856 GTCGTGCAAGAGAGAGAGAGAT 59.317 50.000 1.39 0.00 0.00 2.75
234 235 2.942376 TCGTGCAAGAGAGAGAGAGATC 59.058 50.000 0.00 0.00 0.00 2.75
235 236 2.286359 CGTGCAAGAGAGAGAGAGATCG 60.286 54.545 0.00 0.00 0.00 3.69
236 237 2.033299 GTGCAAGAGAGAGAGAGATCGG 59.967 54.545 0.00 0.00 0.00 4.18
237 238 1.608590 GCAAGAGAGAGAGAGATCGGG 59.391 57.143 0.00 0.00 0.00 5.14
238 239 2.229792 CAAGAGAGAGAGAGATCGGGG 58.770 57.143 0.00 0.00 0.00 5.73
239 240 0.771127 AGAGAGAGAGAGATCGGGGG 59.229 60.000 0.00 0.00 0.00 5.40
240 241 0.893727 GAGAGAGAGAGATCGGGGGC 60.894 65.000 0.00 0.00 0.00 5.80
241 242 2.203422 AGAGAGAGATCGGGGGCG 60.203 66.667 0.00 0.00 0.00 6.13
242 243 2.203365 GAGAGAGATCGGGGGCGA 60.203 66.667 0.00 0.00 0.00 5.54
243 244 2.203422 AGAGAGATCGGGGGCGAG 60.203 66.667 0.00 0.00 0.00 5.03
244 245 2.519780 GAGAGATCGGGGGCGAGT 60.520 66.667 0.00 0.00 0.00 4.18
245 246 2.835431 AGAGATCGGGGGCGAGTG 60.835 66.667 0.00 0.00 0.00 3.51
246 247 3.917760 GAGATCGGGGGCGAGTGG 61.918 72.222 0.00 0.00 0.00 4.00
256 257 4.803426 GCGAGTGGGGAGCGAGTG 62.803 72.222 0.00 0.00 0.00 3.51
257 258 4.135153 CGAGTGGGGAGCGAGTGG 62.135 72.222 0.00 0.00 0.00 4.00
258 259 2.997897 GAGTGGGGAGCGAGTGGT 60.998 66.667 0.00 0.00 0.00 4.16
259 260 2.997897 AGTGGGGAGCGAGTGGTC 60.998 66.667 0.00 0.00 41.93 4.02
281 282 4.856607 GCGTCGGGCGAGGAAGAG 62.857 72.222 6.02 0.00 44.77 2.85
282 283 4.194720 CGTCGGGCGAGGAAGAGG 62.195 72.222 0.00 0.00 44.77 3.69
283 284 3.839432 GTCGGGCGAGGAAGAGGG 61.839 72.222 0.00 0.00 0.00 4.30
286 287 2.687566 GGGCGAGGAAGAGGGGAA 60.688 66.667 0.00 0.00 0.00 3.97
287 288 2.585153 GGCGAGGAAGAGGGGAAC 59.415 66.667 0.00 0.00 0.00 3.62
288 289 2.184579 GCGAGGAAGAGGGGAACG 59.815 66.667 0.00 0.00 0.00 3.95
289 290 2.647158 GCGAGGAAGAGGGGAACGT 61.647 63.158 0.00 0.00 0.00 3.99
290 291 1.215647 CGAGGAAGAGGGGAACGTG 59.784 63.158 0.00 0.00 0.00 4.49
291 292 1.533469 CGAGGAAGAGGGGAACGTGT 61.533 60.000 0.00 0.00 0.00 4.49
292 293 0.246910 GAGGAAGAGGGGAACGTGTC 59.753 60.000 0.00 0.00 0.00 3.67
293 294 1.080025 GGAAGAGGGGAACGTGTCG 60.080 63.158 0.00 0.00 0.00 4.35
294 295 1.080025 GAAGAGGGGAACGTGTCGG 60.080 63.158 0.00 0.00 0.00 4.79
295 296 3.236003 AAGAGGGGAACGTGTCGGC 62.236 63.158 0.00 0.00 0.00 5.54
305 306 3.834799 GTGTCGGCGGAGGGGTAG 61.835 72.222 7.21 0.00 0.00 3.18
306 307 4.051167 TGTCGGCGGAGGGGTAGA 62.051 66.667 7.21 0.00 0.00 2.59
307 308 2.757099 GTCGGCGGAGGGGTAGAA 60.757 66.667 7.21 0.00 0.00 2.10
308 309 2.132352 GTCGGCGGAGGGGTAGAAT 61.132 63.158 7.21 0.00 0.00 2.40
309 310 2.131709 TCGGCGGAGGGGTAGAATG 61.132 63.158 7.21 0.00 0.00 2.67
310 311 2.829592 GGCGGAGGGGTAGAATGG 59.170 66.667 0.00 0.00 0.00 3.16
311 312 2.819284 GGCGGAGGGGTAGAATGGG 61.819 68.421 0.00 0.00 0.00 4.00
312 313 1.764854 GCGGAGGGGTAGAATGGGA 60.765 63.158 0.00 0.00 0.00 4.37
313 314 1.342672 GCGGAGGGGTAGAATGGGAA 61.343 60.000 0.00 0.00 0.00 3.97
314 315 1.209621 CGGAGGGGTAGAATGGGAAA 58.790 55.000 0.00 0.00 0.00 3.13
315 316 1.134189 CGGAGGGGTAGAATGGGAAAC 60.134 57.143 0.00 0.00 0.00 2.78
316 317 2.206223 GGAGGGGTAGAATGGGAAACT 58.794 52.381 0.00 0.00 0.00 2.66
317 318 2.172930 GGAGGGGTAGAATGGGAAACTC 59.827 54.545 0.00 0.00 0.00 3.01
318 319 1.838077 AGGGGTAGAATGGGAAACTCG 59.162 52.381 0.00 0.00 0.00 4.18
319 320 1.134189 GGGGTAGAATGGGAAACTCGG 60.134 57.143 0.00 0.00 0.00 4.63
320 321 1.134189 GGGTAGAATGGGAAACTCGGG 60.134 57.143 0.00 0.00 0.00 5.14
321 322 1.134189 GGTAGAATGGGAAACTCGGGG 60.134 57.143 0.00 0.00 0.00 5.73
322 323 1.835531 GTAGAATGGGAAACTCGGGGA 59.164 52.381 0.00 0.00 0.00 4.81
323 324 1.368374 AGAATGGGAAACTCGGGGAA 58.632 50.000 0.00 0.00 0.00 3.97
324 325 1.708551 AGAATGGGAAACTCGGGGAAA 59.291 47.619 0.00 0.00 0.00 3.13
325 326 2.109304 AGAATGGGAAACTCGGGGAAAA 59.891 45.455 0.00 0.00 0.00 2.29
326 327 2.919772 ATGGGAAACTCGGGGAAAAT 57.080 45.000 0.00 0.00 0.00 1.82
327 328 2.209690 TGGGAAACTCGGGGAAAATC 57.790 50.000 0.00 0.00 0.00 2.17
328 329 1.092348 GGGAAACTCGGGGAAAATCG 58.908 55.000 0.00 0.00 0.00 3.34
329 330 1.612462 GGGAAACTCGGGGAAAATCGT 60.612 52.381 0.00 0.00 0.00 3.73
330 331 2.355007 GGGAAACTCGGGGAAAATCGTA 60.355 50.000 0.00 0.00 0.00 3.43
331 332 2.934553 GGAAACTCGGGGAAAATCGTAG 59.065 50.000 0.00 0.00 0.00 3.51
332 333 2.019948 AACTCGGGGAAAATCGTAGC 57.980 50.000 0.00 0.00 0.00 3.58
333 334 0.177373 ACTCGGGGAAAATCGTAGCC 59.823 55.000 0.00 0.00 0.00 3.93
334 335 0.464452 CTCGGGGAAAATCGTAGCCT 59.536 55.000 0.00 0.00 0.00 4.58
335 336 1.684983 CTCGGGGAAAATCGTAGCCTA 59.315 52.381 0.00 0.00 0.00 3.93
336 337 1.410153 TCGGGGAAAATCGTAGCCTAC 59.590 52.381 0.00 0.00 0.00 3.18
351 352 2.805277 CTACGAAAGTTGGACGCGT 58.195 52.632 13.85 13.85 46.40 6.01
352 353 0.433492 CTACGAAAGTTGGACGCGTG 59.567 55.000 20.70 0.00 46.40 5.34
353 354 1.550659 TACGAAAGTTGGACGCGTGC 61.551 55.000 24.88 24.88 46.40 5.34
354 355 2.127758 GAAAGTTGGACGCGTGCG 60.128 61.111 25.71 13.39 46.03 5.34
355 356 3.573489 GAAAGTTGGACGCGTGCGG 62.573 63.158 25.71 0.68 44.69 5.69
371 372 4.256180 GGCGATTCAGGGCGGGAT 62.256 66.667 0.00 0.00 0.00 3.85
372 373 2.666526 GCGATTCAGGGCGGGATC 60.667 66.667 0.00 0.00 0.00 3.36
373 374 2.356313 CGATTCAGGGCGGGATCG 60.356 66.667 4.40 4.40 39.81 3.69
374 375 2.856628 CGATTCAGGGCGGGATCGA 61.857 63.158 11.70 0.00 39.00 3.59
375 376 1.005630 GATTCAGGGCGGGATCGAG 60.006 63.158 0.00 0.00 39.00 4.04
376 377 3.170490 ATTCAGGGCGGGATCGAGC 62.170 63.158 0.00 0.00 39.00 5.03
385 386 4.292178 GGATCGAGCGGCCAGGAG 62.292 72.222 2.24 0.00 0.00 3.69
386 387 4.959596 GATCGAGCGGCCAGGAGC 62.960 72.222 2.24 0.00 42.60 4.70
405 406 3.818787 GCCCGCTCGTTCCGTCTA 61.819 66.667 0.00 0.00 0.00 2.59
406 407 2.879907 CCCGCTCGTTCCGTCTAA 59.120 61.111 0.00 0.00 0.00 2.10
407 408 1.213537 CCCGCTCGTTCCGTCTAAA 59.786 57.895 0.00 0.00 0.00 1.85
408 409 0.179119 CCCGCTCGTTCCGTCTAAAT 60.179 55.000 0.00 0.00 0.00 1.40
409 410 0.921347 CCGCTCGTTCCGTCTAAATG 59.079 55.000 0.00 0.00 0.00 2.32
410 411 0.921347 CGCTCGTTCCGTCTAAATGG 59.079 55.000 0.00 0.00 0.00 3.16
411 412 1.734707 CGCTCGTTCCGTCTAAATGGT 60.735 52.381 0.00 0.00 32.88 3.55
412 413 1.659098 GCTCGTTCCGTCTAAATGGTG 59.341 52.381 0.00 0.00 32.88 4.17
413 414 1.659098 CTCGTTCCGTCTAAATGGTGC 59.341 52.381 0.00 0.00 32.88 5.01
414 415 0.368907 CGTTCCGTCTAAATGGTGCG 59.631 55.000 0.00 0.00 32.88 5.34
415 416 0.096454 GTTCCGTCTAAATGGTGCGC 59.904 55.000 0.00 0.00 32.88 6.09
416 417 1.355796 TTCCGTCTAAATGGTGCGCG 61.356 55.000 0.00 0.00 32.88 6.86
417 418 2.098233 CCGTCTAAATGGTGCGCGT 61.098 57.895 8.43 0.00 0.00 6.01
418 419 1.058748 CGTCTAAATGGTGCGCGTG 59.941 57.895 8.43 0.00 0.00 5.34
419 420 1.226018 GTCTAAATGGTGCGCGTGC 60.226 57.895 15.48 15.48 43.20 5.34
430 431 3.676091 GCGCGTGCACTTTTTAGAT 57.324 47.368 17.66 0.00 42.15 1.98
431 432 1.963747 GCGCGTGCACTTTTTAGATT 58.036 45.000 17.66 0.00 42.15 2.40
432 433 2.315901 GCGCGTGCACTTTTTAGATTT 58.684 42.857 17.66 0.00 42.15 2.17
433 434 2.724174 GCGCGTGCACTTTTTAGATTTT 59.276 40.909 17.66 0.00 42.15 1.82
434 435 3.909574 GCGCGTGCACTTTTTAGATTTTA 59.090 39.130 17.66 0.00 42.15 1.52
435 436 4.029087 GCGCGTGCACTTTTTAGATTTTAG 59.971 41.667 17.66 0.00 42.15 1.85
436 437 4.553429 CGCGTGCACTTTTTAGATTTTAGG 59.447 41.667 16.19 0.00 0.00 2.69
437 438 5.458015 GCGTGCACTTTTTAGATTTTAGGT 58.542 37.500 16.19 0.00 0.00 3.08
438 439 6.604930 GCGTGCACTTTTTAGATTTTAGGTA 58.395 36.000 16.19 0.00 0.00 3.08
439 440 7.079475 GCGTGCACTTTTTAGATTTTAGGTAA 58.921 34.615 16.19 0.00 0.00 2.85
440 441 7.592164 GCGTGCACTTTTTAGATTTTAGGTAAA 59.408 33.333 16.19 0.00 0.00 2.01
441 442 9.453325 CGTGCACTTTTTAGATTTTAGGTAAAA 57.547 29.630 16.19 0.00 39.25 1.52
464 465 2.544844 AGGGGGAACTCTTACGATCA 57.455 50.000 0.00 0.00 38.96 2.92
465 466 2.108970 AGGGGGAACTCTTACGATCAC 58.891 52.381 0.00 0.00 38.96 3.06
466 467 1.138464 GGGGGAACTCTTACGATCACC 59.862 57.143 0.00 0.00 34.50 4.02
467 468 1.138464 GGGGAACTCTTACGATCACCC 59.862 57.143 0.00 0.00 35.80 4.61
468 469 1.202382 GGGAACTCTTACGATCACCCG 60.202 57.143 0.00 0.00 0.00 5.28
469 470 1.202382 GGAACTCTTACGATCACCCGG 60.202 57.143 0.00 0.00 0.00 5.73
470 471 0.175073 AACTCTTACGATCACCCGGC 59.825 55.000 0.00 0.00 0.00 6.13
471 472 1.299165 CTCTTACGATCACCCGGCG 60.299 63.158 0.00 0.00 0.00 6.46
472 473 2.279252 CTTACGATCACCCGGCGG 60.279 66.667 21.46 21.46 0.00 6.13
473 474 2.755064 TTACGATCACCCGGCGGA 60.755 61.111 30.79 8.18 0.00 5.54
474 475 2.083835 CTTACGATCACCCGGCGGAT 62.084 60.000 30.79 7.59 0.00 4.18
475 476 2.079020 TTACGATCACCCGGCGGATC 62.079 60.000 30.79 21.09 37.22 3.36
488 489 3.577231 CGGATCGCAGCTTCTATGT 57.423 52.632 0.00 0.00 0.00 2.29
489 490 1.413382 CGGATCGCAGCTTCTATGTC 58.587 55.000 0.00 0.00 0.00 3.06
490 491 1.789506 GGATCGCAGCTTCTATGTCC 58.210 55.000 0.00 0.00 0.00 4.02
491 492 1.413382 GATCGCAGCTTCTATGTCCG 58.587 55.000 0.00 0.00 0.00 4.79
492 493 0.032678 ATCGCAGCTTCTATGTCCGG 59.967 55.000 0.00 0.00 0.00 5.14
493 494 2.240500 CGCAGCTTCTATGTCCGGC 61.241 63.158 0.00 0.00 0.00 6.13
494 495 1.153369 GCAGCTTCTATGTCCGGCA 60.153 57.895 0.00 0.00 0.00 5.69
495 496 1.432270 GCAGCTTCTATGTCCGGCAC 61.432 60.000 0.00 0.00 0.00 5.01
496 497 0.811616 CAGCTTCTATGTCCGGCACC 60.812 60.000 0.00 0.00 0.00 5.01
497 498 0.978146 AGCTTCTATGTCCGGCACCT 60.978 55.000 0.00 0.00 0.00 4.00
498 499 0.530870 GCTTCTATGTCCGGCACCTC 60.531 60.000 0.00 0.00 0.00 3.85
499 500 0.105039 CTTCTATGTCCGGCACCTCC 59.895 60.000 0.00 0.00 0.00 4.30
500 501 1.335132 TTCTATGTCCGGCACCTCCC 61.335 60.000 0.00 0.00 0.00 4.30
501 502 2.766651 TATGTCCGGCACCTCCCC 60.767 66.667 0.00 0.00 0.00 4.81
502 503 3.326385 TATGTCCGGCACCTCCCCT 62.326 63.158 0.00 0.00 0.00 4.79
509 510 2.272471 GCACCTCCCCTGCCTTAC 59.728 66.667 0.00 0.00 0.00 2.34
510 511 2.602676 GCACCTCCCCTGCCTTACA 61.603 63.158 0.00 0.00 0.00 2.41
511 512 1.299976 CACCTCCCCTGCCTTACAC 59.700 63.158 0.00 0.00 0.00 2.90
512 513 1.151899 ACCTCCCCTGCCTTACACA 60.152 57.895 0.00 0.00 0.00 3.72
513 514 0.550147 ACCTCCCCTGCCTTACACAT 60.550 55.000 0.00 0.00 0.00 3.21
514 515 0.107017 CCTCCCCTGCCTTACACATG 60.107 60.000 0.00 0.00 0.00 3.21
515 516 0.620556 CTCCCCTGCCTTACACATGT 59.379 55.000 0.00 0.00 0.00 3.21
516 517 0.618458 TCCCCTGCCTTACACATGTC 59.382 55.000 0.00 0.00 0.00 3.06
517 518 0.620556 CCCCTGCCTTACACATGTCT 59.379 55.000 0.00 0.00 0.00 3.41
518 519 1.004745 CCCCTGCCTTACACATGTCTT 59.995 52.381 0.00 0.00 0.00 3.01
519 520 2.238646 CCCCTGCCTTACACATGTCTTA 59.761 50.000 0.00 0.00 0.00 2.10
520 521 3.535561 CCCTGCCTTACACATGTCTTAG 58.464 50.000 0.00 0.00 0.00 2.18
521 522 3.055094 CCCTGCCTTACACATGTCTTAGT 60.055 47.826 0.00 0.00 0.00 2.24
522 523 3.935203 CCTGCCTTACACATGTCTTAGTG 59.065 47.826 0.00 0.00 41.40 2.74
523 524 4.322725 CCTGCCTTACACATGTCTTAGTGA 60.323 45.833 0.00 0.00 39.03 3.41
524 525 4.820897 TGCCTTACACATGTCTTAGTGAG 58.179 43.478 0.00 0.00 39.03 3.51
525 526 4.526650 TGCCTTACACATGTCTTAGTGAGA 59.473 41.667 0.00 0.00 39.03 3.27
526 527 5.105752 GCCTTACACATGTCTTAGTGAGAG 58.894 45.833 0.00 0.00 39.03 3.20
527 528 5.105752 CCTTACACATGTCTTAGTGAGAGC 58.894 45.833 0.00 0.00 39.03 4.09
528 529 3.601443 ACACATGTCTTAGTGAGAGCC 57.399 47.619 0.00 0.00 39.03 4.70
529 530 2.234908 ACACATGTCTTAGTGAGAGCCC 59.765 50.000 0.00 0.00 39.03 5.19
530 531 2.234661 CACATGTCTTAGTGAGAGCCCA 59.765 50.000 0.00 0.00 37.97 5.36
531 532 2.234908 ACATGTCTTAGTGAGAGCCCAC 59.765 50.000 0.00 0.00 34.31 4.61
532 533 2.009681 TGTCTTAGTGAGAGCCCACA 57.990 50.000 0.00 0.00 39.42 4.17
533 534 2.540383 TGTCTTAGTGAGAGCCCACAT 58.460 47.619 0.00 0.00 39.42 3.21
534 535 3.708451 TGTCTTAGTGAGAGCCCACATA 58.292 45.455 0.00 0.00 39.42 2.29
535 536 3.447586 TGTCTTAGTGAGAGCCCACATAC 59.552 47.826 0.00 0.00 39.42 2.39
536 537 3.031736 TCTTAGTGAGAGCCCACATACC 58.968 50.000 0.00 0.00 39.42 2.73
537 538 1.399714 TAGTGAGAGCCCACATACCG 58.600 55.000 0.00 0.00 39.42 4.02
538 539 0.614979 AGTGAGAGCCCACATACCGT 60.615 55.000 0.00 0.00 39.42 4.83
539 540 0.179108 GTGAGAGCCCACATACCGTC 60.179 60.000 0.00 0.00 37.04 4.79
540 541 0.324368 TGAGAGCCCACATACCGTCT 60.324 55.000 0.00 0.00 0.00 4.18
541 542 0.824759 GAGAGCCCACATACCGTCTT 59.175 55.000 0.00 0.00 0.00 3.01
542 543 1.207329 GAGAGCCCACATACCGTCTTT 59.793 52.381 0.00 0.00 0.00 2.52
543 544 1.066143 AGAGCCCACATACCGTCTTTG 60.066 52.381 0.00 0.00 0.00 2.77
544 545 0.690762 AGCCCACATACCGTCTTTGT 59.309 50.000 0.00 0.00 0.00 2.83
545 546 1.903860 AGCCCACATACCGTCTTTGTA 59.096 47.619 0.00 0.00 0.00 2.41
546 547 2.303600 AGCCCACATACCGTCTTTGTAA 59.696 45.455 0.00 0.00 0.00 2.41
547 548 3.075884 GCCCACATACCGTCTTTGTAAA 58.924 45.455 0.00 0.00 0.00 2.01
548 549 3.502979 GCCCACATACCGTCTTTGTAAAA 59.497 43.478 0.00 0.00 0.00 1.52
549 550 4.614306 GCCCACATACCGTCTTTGTAAAAC 60.614 45.833 0.00 0.00 0.00 2.43
550 551 4.377635 CCCACATACCGTCTTTGTAAAACG 60.378 45.833 0.00 0.00 36.22 3.60
551 552 4.145997 CACATACCGTCTTTGTAAAACGC 58.854 43.478 0.00 0.00 35.17 4.84
552 553 3.120923 ACATACCGTCTTTGTAAAACGCG 60.121 43.478 3.53 3.53 35.17 6.01
553 554 0.041926 ACCGTCTTTGTAAAACGCGC 60.042 50.000 5.73 0.00 35.17 6.86
554 555 0.233848 CCGTCTTTGTAAAACGCGCT 59.766 50.000 5.73 0.00 35.17 5.92
555 556 1.333435 CCGTCTTTGTAAAACGCGCTT 60.333 47.619 5.73 0.00 35.17 4.68
556 557 1.960549 CGTCTTTGTAAAACGCGCTTC 59.039 47.619 5.73 0.00 0.00 3.86
557 558 2.348218 CGTCTTTGTAAAACGCGCTTCT 60.348 45.455 5.73 0.00 0.00 2.85
558 559 3.121261 CGTCTTTGTAAAACGCGCTTCTA 60.121 43.478 5.73 0.00 0.00 2.10
559 560 4.139531 GTCTTTGTAAAACGCGCTTCTAC 58.860 43.478 5.73 6.81 0.00 2.59
560 561 3.803231 TCTTTGTAAAACGCGCTTCTACA 59.197 39.130 5.73 9.33 0.00 2.74
561 562 4.270566 TCTTTGTAAAACGCGCTTCTACAA 59.729 37.500 5.73 14.43 32.20 2.41
562 563 3.508648 TGTAAAACGCGCTTCTACAAC 57.491 42.857 5.73 0.00 0.00 3.32
563 564 2.864946 TGTAAAACGCGCTTCTACAACA 59.135 40.909 5.73 0.00 0.00 3.33
564 565 2.663279 AAAACGCGCTTCTACAACAG 57.337 45.000 5.73 0.00 0.00 3.16
565 566 0.865769 AAACGCGCTTCTACAACAGG 59.134 50.000 5.73 0.00 0.00 4.00
566 567 0.032952 AACGCGCTTCTACAACAGGA 59.967 50.000 5.73 0.00 0.00 3.86
567 568 0.388649 ACGCGCTTCTACAACAGGAG 60.389 55.000 5.73 0.00 32.21 3.69
576 577 6.654793 CTTCTACAACAGGAGCTATGTTTC 57.345 41.667 12.83 0.00 38.80 2.78
577 578 6.360370 TTCTACAACAGGAGCTATGTTTCT 57.640 37.500 12.83 5.60 38.80 2.52
578 579 5.724328 TCTACAACAGGAGCTATGTTTCTG 58.276 41.667 12.83 7.00 38.80 3.02
579 580 4.623932 ACAACAGGAGCTATGTTTCTGA 57.376 40.909 12.83 0.00 38.80 3.27
580 581 4.973168 ACAACAGGAGCTATGTTTCTGAA 58.027 39.130 12.83 0.00 38.80 3.02
581 582 5.376625 ACAACAGGAGCTATGTTTCTGAAA 58.623 37.500 12.83 0.00 38.80 2.69
582 583 5.239525 ACAACAGGAGCTATGTTTCTGAAAC 59.760 40.000 22.94 22.94 38.80 2.78
596 597 7.359595 TGTTTCTGAAACATATGTAGTGTTGC 58.640 34.615 27.14 0.00 45.79 4.17
597 598 7.012799 TGTTTCTGAAACATATGTAGTGTTGCA 59.987 33.333 27.14 0.00 45.79 4.08
598 599 7.503521 TTCTGAAACATATGTAGTGTTGCAA 57.496 32.000 9.21 0.00 42.83 4.08
599 600 7.686438 TCTGAAACATATGTAGTGTTGCAAT 57.314 32.000 9.21 0.00 42.83 3.56
600 601 7.529158 TCTGAAACATATGTAGTGTTGCAATG 58.471 34.615 9.21 0.00 42.83 2.82
601 602 6.619744 TGAAACATATGTAGTGTTGCAATGG 58.380 36.000 9.21 0.00 41.07 3.16
602 603 6.208402 TGAAACATATGTAGTGTTGCAATGGT 59.792 34.615 9.21 0.00 41.07 3.55
603 604 5.818136 ACATATGTAGTGTTGCAATGGTC 57.182 39.130 6.56 0.00 0.00 4.02
604 605 5.500234 ACATATGTAGTGTTGCAATGGTCT 58.500 37.500 6.56 1.81 0.00 3.85
605 606 6.649155 ACATATGTAGTGTTGCAATGGTCTA 58.351 36.000 6.56 0.83 0.00 2.59
606 607 7.282585 ACATATGTAGTGTTGCAATGGTCTAT 58.717 34.615 6.56 0.00 0.00 1.98
607 608 7.227314 ACATATGTAGTGTTGCAATGGTCTATG 59.773 37.037 6.56 7.47 0.00 2.23
608 609 5.159273 TGTAGTGTTGCAATGGTCTATGA 57.841 39.130 0.59 0.00 0.00 2.15
609 610 5.744171 TGTAGTGTTGCAATGGTCTATGAT 58.256 37.500 0.59 0.00 0.00 2.45
610 611 6.883744 TGTAGTGTTGCAATGGTCTATGATA 58.116 36.000 0.59 0.00 0.00 2.15
611 612 6.986231 TGTAGTGTTGCAATGGTCTATGATAG 59.014 38.462 0.59 0.00 0.00 2.08
612 613 5.371526 AGTGTTGCAATGGTCTATGATAGG 58.628 41.667 0.59 0.00 0.00 2.57
613 614 5.104360 AGTGTTGCAATGGTCTATGATAGGT 60.104 40.000 0.59 0.00 0.00 3.08
614 615 5.237344 GTGTTGCAATGGTCTATGATAGGTC 59.763 44.000 0.59 0.00 0.00 3.85
615 616 5.130975 TGTTGCAATGGTCTATGATAGGTCT 59.869 40.000 0.59 0.00 0.00 3.85
616 617 5.894298 TGCAATGGTCTATGATAGGTCTT 57.106 39.130 0.00 0.00 0.00 3.01
617 618 6.252599 TGCAATGGTCTATGATAGGTCTTT 57.747 37.500 0.00 0.00 0.00 2.52
618 619 6.662755 TGCAATGGTCTATGATAGGTCTTTT 58.337 36.000 0.00 0.00 0.00 2.27
619 620 7.118723 TGCAATGGTCTATGATAGGTCTTTTT 58.881 34.615 0.00 0.00 0.00 1.94
641 642 7.507672 TTTTTAAACGAAATTTGTCTTGCGA 57.492 28.000 0.00 0.00 0.00 5.10
642 643 7.687005 TTTTAAACGAAATTTGTCTTGCGAT 57.313 28.000 0.00 0.00 0.00 4.58
643 644 7.687005 TTTAAACGAAATTTGTCTTGCGATT 57.313 28.000 0.00 0.00 0.00 3.34
644 645 7.687005 TTAAACGAAATTTGTCTTGCGATTT 57.313 28.000 0.00 0.00 0.00 2.17
645 646 6.582437 AAACGAAATTTGTCTTGCGATTTT 57.418 29.167 0.00 0.00 0.00 1.82
646 647 6.582437 AACGAAATTTGTCTTGCGATTTTT 57.418 29.167 0.00 0.00 0.00 1.94
664 665 3.691049 TTTTTCTGCAACAAGACCTCG 57.309 42.857 0.00 0.00 0.00 4.63
665 666 1.593196 TTTCTGCAACAAGACCTCGG 58.407 50.000 0.00 0.00 0.00 4.63
666 667 0.468226 TTCTGCAACAAGACCTCGGT 59.532 50.000 0.00 0.00 0.00 4.69
667 668 0.468226 TCTGCAACAAGACCTCGGTT 59.532 50.000 0.00 0.00 0.00 4.44
668 669 0.588252 CTGCAACAAGACCTCGGTTG 59.412 55.000 0.00 0.00 43.53 3.77
670 671 2.701587 CAACAAGACCTCGGTTGCA 58.298 52.632 0.00 0.00 35.95 4.08
671 672 1.021202 CAACAAGACCTCGGTTGCAA 58.979 50.000 0.00 0.00 35.95 4.08
672 673 1.403679 CAACAAGACCTCGGTTGCAAA 59.596 47.619 0.00 0.00 35.95 3.68
673 674 1.757682 ACAAGACCTCGGTTGCAAAA 58.242 45.000 0.00 0.00 0.00 2.44
674 675 2.096248 ACAAGACCTCGGTTGCAAAAA 58.904 42.857 0.00 0.00 0.00 1.94
690 691 1.851658 AAAAATGCAACACGACCTGC 58.148 45.000 0.00 0.00 39.09 4.85
693 694 2.503546 TGCAACACGACCTGCAGA 59.496 55.556 17.39 0.00 43.44 4.26
694 695 1.153269 TGCAACACGACCTGCAGAA 60.153 52.632 17.39 0.00 43.44 3.02
695 696 0.746204 TGCAACACGACCTGCAGAAA 60.746 50.000 17.39 0.00 43.44 2.52
696 697 0.593128 GCAACACGACCTGCAGAAAT 59.407 50.000 17.39 0.00 38.48 2.17
697 698 1.804151 GCAACACGACCTGCAGAAATA 59.196 47.619 17.39 0.00 38.48 1.40
698 699 2.225491 GCAACACGACCTGCAGAAATAA 59.775 45.455 17.39 0.00 38.48 1.40
699 700 3.119849 GCAACACGACCTGCAGAAATAAT 60.120 43.478 17.39 0.00 38.48 1.28
700 701 4.615912 GCAACACGACCTGCAGAAATAATT 60.616 41.667 17.39 0.00 38.48 1.40
701 702 4.946784 ACACGACCTGCAGAAATAATTC 57.053 40.909 17.39 0.00 35.70 2.17
702 703 4.579869 ACACGACCTGCAGAAATAATTCT 58.420 39.130 17.39 0.00 46.91 2.40
714 715 5.942872 AGAAATAATTCTGCAACAAGACCG 58.057 37.500 0.00 0.00 44.25 4.79
715 716 4.701956 AATAATTCTGCAACAAGACCGG 57.298 40.909 0.00 0.00 0.00 5.28
716 717 1.981256 AATTCTGCAACAAGACCGGT 58.019 45.000 6.92 6.92 0.00 5.28
717 718 1.238439 ATTCTGCAACAAGACCGGTG 58.762 50.000 14.63 0.00 0.00 4.94
718 719 0.107410 TTCTGCAACAAGACCGGTGT 60.107 50.000 14.63 4.35 0.00 4.16
719 720 0.107410 TCTGCAACAAGACCGGTGTT 60.107 50.000 14.63 13.09 39.79 3.32
722 723 2.102554 CAACAAGACCGGTGTTGCA 58.897 52.632 36.63 0.00 46.63 4.08
723 724 0.453793 CAACAAGACCGGTGTTGCAA 59.546 50.000 36.63 0.00 46.63 4.08
724 725 1.066908 CAACAAGACCGGTGTTGCAAT 59.933 47.619 36.63 23.55 46.63 3.56
725 726 2.264005 ACAAGACCGGTGTTGCAATA 57.736 45.000 36.63 0.00 37.36 1.90
726 727 2.577700 ACAAGACCGGTGTTGCAATAA 58.422 42.857 36.63 0.00 37.36 1.40
727 728 3.153919 ACAAGACCGGTGTTGCAATAAT 58.846 40.909 36.63 18.65 37.36 1.28
728 729 3.057596 ACAAGACCGGTGTTGCAATAATG 60.058 43.478 36.63 17.57 37.36 1.90
729 730 3.066291 AGACCGGTGTTGCAATAATGA 57.934 42.857 14.63 0.00 0.00 2.57
730 731 3.417101 AGACCGGTGTTGCAATAATGAA 58.583 40.909 14.63 0.00 0.00 2.57
731 732 3.440173 AGACCGGTGTTGCAATAATGAAG 59.560 43.478 14.63 0.00 0.00 3.02
732 733 2.491693 ACCGGTGTTGCAATAATGAAGG 59.508 45.455 6.12 3.17 0.00 3.46
733 734 2.529151 CGGTGTTGCAATAATGAAGGC 58.471 47.619 0.59 0.00 0.00 4.35
734 735 2.094803 CGGTGTTGCAATAATGAAGGCA 60.095 45.455 0.59 0.00 0.00 4.75
735 736 3.253230 GGTGTTGCAATAATGAAGGCAC 58.747 45.455 0.59 2.27 35.74 5.01
736 737 2.916716 GTGTTGCAATAATGAAGGCACG 59.083 45.455 0.59 0.00 35.74 5.34
737 738 2.556189 TGTTGCAATAATGAAGGCACGT 59.444 40.909 0.59 0.00 35.74 4.49
738 739 3.005261 TGTTGCAATAATGAAGGCACGTT 59.995 39.130 0.59 0.00 35.74 3.99
739 740 3.932545 TGCAATAATGAAGGCACGTTT 57.067 38.095 0.00 0.00 0.00 3.60
740 741 3.573598 TGCAATAATGAAGGCACGTTTG 58.426 40.909 0.00 0.00 0.00 2.93
741 742 3.254411 TGCAATAATGAAGGCACGTTTGA 59.746 39.130 0.00 0.00 0.00 2.69
742 743 3.853671 GCAATAATGAAGGCACGTTTGAG 59.146 43.478 0.00 0.00 0.00 3.02
743 744 3.764885 ATAATGAAGGCACGTTTGAGC 57.235 42.857 0.00 0.00 0.00 4.26
744 745 0.238289 AATGAAGGCACGTTTGAGCG 59.762 50.000 0.00 0.00 37.94 5.03
745 746 2.127232 GAAGGCACGTTTGAGCGC 60.127 61.111 0.00 0.00 34.88 5.92
746 747 2.591715 AAGGCACGTTTGAGCGCT 60.592 55.556 11.27 11.27 34.88 5.92
747 748 2.500183 GAAGGCACGTTTGAGCGCTC 62.500 60.000 30.42 30.42 34.88 5.03
748 749 4.430423 GGCACGTTTGAGCGCTCG 62.430 66.667 30.75 22.26 34.88 5.03
749 750 3.403057 GCACGTTTGAGCGCTCGA 61.403 61.111 30.75 27.40 34.88 4.04
750 751 2.730672 GCACGTTTGAGCGCTCGAT 61.731 57.895 30.75 13.05 34.88 3.59
751 752 1.057822 CACGTTTGAGCGCTCGATG 59.942 57.895 30.75 26.55 34.88 3.84
752 753 2.020559 CGTTTGAGCGCTCGATGC 59.979 61.111 30.75 22.24 38.57 3.91
761 762 4.409342 GCTCGATGCGACACAGAT 57.591 55.556 0.00 0.00 0.00 2.90
762 763 2.211675 GCTCGATGCGACACAGATC 58.788 57.895 0.00 0.00 0.00 2.75
763 764 0.248825 GCTCGATGCGACACAGATCT 60.249 55.000 0.00 0.00 0.00 2.75
764 765 1.475045 CTCGATGCGACACAGATCTG 58.525 55.000 21.37 21.37 0.00 2.90
765 766 1.064654 CTCGATGCGACACAGATCTGA 59.935 52.381 29.27 5.83 0.00 3.27
766 767 1.678101 TCGATGCGACACAGATCTGAT 59.322 47.619 29.27 16.17 0.00 2.90
767 768 2.049959 CGATGCGACACAGATCTGATC 58.950 52.381 29.27 22.00 0.00 2.92
768 769 2.542411 CGATGCGACACAGATCTGATCA 60.542 50.000 29.27 16.94 0.00 2.92
769 770 2.573941 TGCGACACAGATCTGATCAG 57.426 50.000 29.27 17.07 0.00 2.90
770 771 1.207390 GCGACACAGATCTGATCAGC 58.793 55.000 29.27 23.40 0.00 4.26
771 772 1.850377 CGACACAGATCTGATCAGCC 58.150 55.000 29.27 11.78 0.00 4.85
772 773 1.850377 GACACAGATCTGATCAGCCG 58.150 55.000 29.27 8.20 0.00 5.52
773 774 0.463204 ACACAGATCTGATCAGCCGG 59.537 55.000 29.27 14.14 0.00 6.13
774 775 0.879400 CACAGATCTGATCAGCCGGC 60.879 60.000 29.27 21.89 0.00 6.13
775 776 1.664017 CAGATCTGATCAGCCGGCG 60.664 63.158 23.20 16.49 0.00 6.46
776 777 2.356793 GATCTGATCAGCCGGCGG 60.357 66.667 24.35 24.35 0.00 6.13
777 778 2.839632 ATCTGATCAGCCGGCGGA 60.840 61.111 31.28 31.28 0.00 5.54
778 779 3.157217 ATCTGATCAGCCGGCGGAC 62.157 63.158 31.76 23.31 0.00 4.79
820 821 5.991328 AAGATACGTGACAGCCAAATATG 57.009 39.130 0.00 0.00 0.00 1.78
825 826 5.276461 ACGTGACAGCCAAATATGATAGA 57.724 39.130 0.00 0.00 0.00 1.98
848 849 1.373497 ATGGATTCCTCGCGCGATC 60.373 57.895 34.86 26.46 0.00 3.69
856 857 1.417592 CTCGCGCGATCATTATGGC 59.582 57.895 34.86 0.00 33.80 4.40
989 990 1.455959 CGAATCCTCCCTCCCGTCT 60.456 63.158 0.00 0.00 0.00 4.18
992 993 2.930777 AATCCTCCCTCCCGTCTCCG 62.931 65.000 0.00 0.00 0.00 4.63
993 994 4.444081 CCTCCCTCCCGTCTCCGT 62.444 72.222 0.00 0.00 0.00 4.69
1050 1107 4.452733 CCGGTGTTCCTCTCCCGC 62.453 72.222 0.00 0.00 39.12 6.13
1147 1204 3.917760 CGCCTCCCCCTCACGATC 61.918 72.222 0.00 0.00 0.00 3.69
1150 1207 2.844839 CTCCCCCTCACGATCCCC 60.845 72.222 0.00 0.00 0.00 4.81
1167 1224 1.674322 CCCCTTTTCGTGCCGACAT 60.674 57.895 0.00 0.00 34.89 3.06
1172 1229 1.129811 CTTTTCGTGCCGACATTACCC 59.870 52.381 0.00 0.00 34.89 3.69
1260 1320 4.882396 GCGCGGGAGAAGGAGCTC 62.882 72.222 8.83 4.71 0.00 4.09
1473 1540 2.046892 GAGCAGAAGAAGGCCGCA 60.047 61.111 0.00 0.00 0.00 5.69
1535 1608 3.490759 GGACATGCGCGTGGACAG 61.491 66.667 31.55 8.47 0.00 3.51
1713 1786 2.437895 GCCGGGTACAGAAAGCCC 60.438 66.667 2.18 0.00 39.03 5.19
1776 1849 3.799753 GATGTCATCGGCGTTGCT 58.200 55.556 12.89 0.71 0.00 3.91
1782 1855 1.446792 CATCGGCGTTGCTCAGACT 60.447 57.895 6.85 0.00 0.00 3.24
1788 1861 1.005748 CGTTGCTCAGACTGGCTCA 60.006 57.895 14.46 3.61 0.00 4.26
1797 1870 1.376553 GACTGGCTCAGGCAAGACC 60.377 63.158 1.02 0.00 41.91 3.85
1799 1872 4.704833 TGGCTCAGGCAAGACCGC 62.705 66.667 0.00 0.00 46.52 5.68
1800 1873 4.400961 GGCTCAGGCAAGACCGCT 62.401 66.667 0.00 0.00 46.52 5.52
1824 1897 4.746309 GTGCTCCCCATGCTGGCA 62.746 66.667 0.00 0.00 35.79 4.92
1831 1904 1.239296 CCCCATGCTGGCATACATCG 61.239 60.000 7.79 0.00 35.79 3.84
1947 2020 2.383527 GGAGACGGTGAAGCTTGCG 61.384 63.158 2.10 0.00 0.00 4.85
2160 2233 0.107456 ACAGGATGATCGACATGGGC 59.893 55.000 0.00 0.00 39.69 5.36
2181 2254 3.637273 GAGCCCCAGGTTGTCGGT 61.637 66.667 0.00 0.00 0.00 4.69
2217 2290 2.922503 TCGAGCCACCTGAAGCCA 60.923 61.111 0.00 0.00 0.00 4.75
2235 2308 1.970114 AGAGAACGCGGACGAGGAA 60.970 57.895 12.47 0.00 43.93 3.36
2241 2314 2.893398 GCGGACGAGGAACTGGAT 59.107 61.111 0.00 0.00 41.55 3.41
2253 2326 0.616111 AACTGGATGAGGCGAGGACT 60.616 55.000 0.00 0.00 0.00 3.85
2259 2332 1.067821 GATGAGGCGAGGACTTACAGG 59.932 57.143 0.00 0.00 0.00 4.00
2274 2347 0.472471 ACAGGACGACCCACATGTTT 59.528 50.000 0.00 0.00 37.41 2.83
2352 2425 3.735029 GTCGTCACGGTCGGCTCT 61.735 66.667 0.00 0.00 0.00 4.09
2384 2457 2.273179 CGGACCTCGTCACCCAGAA 61.273 63.158 0.00 0.00 33.68 3.02
2406 2479 1.144691 TGGTCATGGTGAAGGTCCAA 58.855 50.000 0.00 0.00 38.52 3.53
2409 2482 2.224769 GGTCATGGTGAAGGTCCAAGAA 60.225 50.000 0.00 0.00 38.52 2.52
2433 2506 0.975556 TGCCACGGCTCAAGAGGATA 60.976 55.000 9.92 0.00 42.51 2.59
2466 2539 1.299976 GAAGGACAGGACGGCCATT 59.700 57.895 11.69 0.00 36.29 3.16
2503 2576 1.902508 AGAATTCCGTGGAGAAGCTCA 59.097 47.619 0.65 0.00 31.08 4.26
2601 2715 1.215647 CCTCGACGGGTTCAGGAAG 59.784 63.158 0.00 0.00 0.00 3.46
2634 2748 2.743718 CTCGTGGCCACTGACCTT 59.256 61.111 32.28 0.00 0.00 3.50
2727 2841 1.099295 ACACGCATCGTATCGGGAGA 61.099 55.000 2.71 0.00 40.46 3.71
2730 2844 0.663568 CGCATCGTATCGGGAGAACC 60.664 60.000 0.00 0.00 45.37 3.62
2772 2886 2.731976 GCTCTCGACATCGTTTTTGACT 59.268 45.455 0.54 0.00 40.80 3.41
2804 2918 7.201478 GGACACTGACATTTTCTTCGATCTTAG 60.201 40.741 0.00 0.00 0.00 2.18
2860 2974 1.077930 GAGCTTGCCAGGCATGAGA 60.078 57.895 27.65 7.43 38.76 3.27
2877 2991 0.468226 AGACGTCCAAGTTCAAGCCA 59.532 50.000 13.01 0.00 0.00 4.75
2884 2998 1.528129 CAAGTTCAAGCCAGGGTCTC 58.472 55.000 0.00 0.00 0.00 3.36
2910 3024 3.702045 CTGGTAGACCTCCGAGAAGAAAT 59.298 47.826 0.00 0.00 36.82 2.17
2911 3025 3.447586 TGGTAGACCTCCGAGAAGAAATG 59.552 47.826 0.00 0.00 36.82 2.32
2992 3106 3.248602 GCTTCGCCGTAATGAGATTGAAT 59.751 43.478 0.00 0.00 0.00 2.57
3033 3147 4.380867 GGGTAAGATGAGGTGCAAACATTG 60.381 45.833 0.00 0.00 0.00 2.82
3054 3168 5.543507 TGCACTAACCATTTGAACCATTT 57.456 34.783 0.00 0.00 0.00 2.32
3070 3184 8.600449 TGAACCATTTGAACCATTTTATTGTC 57.400 30.769 0.00 0.00 0.00 3.18
3115 3229 2.842208 TTGGTTTGACGCAACTTCAG 57.158 45.000 0.00 0.00 0.00 3.02
3123 3237 5.493133 TTGACGCAACTTCAGTGTATTTT 57.507 34.783 0.00 0.00 0.00 1.82
3124 3238 4.843147 TGACGCAACTTCAGTGTATTTTG 58.157 39.130 0.00 0.00 0.00 2.44
3127 3241 3.974401 CGCAACTTCAGTGTATTTTGGTG 59.026 43.478 0.00 0.00 0.00 4.17
3172 3286 9.032420 CATCTGATGTATATGATCTTCATTCCG 57.968 37.037 9.50 0.00 38.26 4.30
3279 3394 6.474819 TTTTCGCATTCTAAGATTTCGTCA 57.525 33.333 0.00 0.00 0.00 4.35
3291 3406 5.948992 AGATTTCGTCAAAAGAAAGGGAG 57.051 39.130 0.00 0.00 40.39 4.30
3397 4330 1.206132 ACTCATACGGGACAATTCGCA 59.794 47.619 0.00 0.00 34.29 5.10
3398 4331 1.593006 CTCATACGGGACAATTCGCAC 59.407 52.381 0.00 0.00 34.29 5.34
3399 4332 1.066787 TCATACGGGACAATTCGCACA 60.067 47.619 0.00 0.00 34.29 4.57
3409 4342 1.205655 CAATTCGCACAGAGGAGGAGA 59.794 52.381 0.00 0.00 0.00 3.71
3444 4377 1.872237 GCCGCCAGATATACGCAAGAA 60.872 52.381 0.00 0.00 43.62 2.52
3445 4378 1.792949 CCGCCAGATATACGCAAGAAC 59.207 52.381 0.00 0.00 43.62 3.01
3446 4379 2.545952 CCGCCAGATATACGCAAGAACT 60.546 50.000 0.00 0.00 43.62 3.01
3447 4380 2.726760 CGCCAGATATACGCAAGAACTC 59.273 50.000 0.00 0.00 43.62 3.01
3450 4383 3.309388 CAGATATACGCAAGAACTCGGG 58.691 50.000 0.00 0.00 43.62 5.14
3451 4384 2.957006 AGATATACGCAAGAACTCGGGT 59.043 45.455 0.00 0.00 43.62 5.28
3452 4385 2.572191 TATACGCAAGAACTCGGGTG 57.428 50.000 0.00 0.00 43.62 4.61
3453 4386 0.892755 ATACGCAAGAACTCGGGTGA 59.107 50.000 0.00 0.00 43.62 4.02
3454 4387 0.242825 TACGCAAGAACTCGGGTGAG 59.757 55.000 0.00 0.00 44.84 3.51
3455 4388 1.738099 CGCAAGAACTCGGGTGAGG 60.738 63.158 0.00 0.00 43.89 3.86
3456 4389 2.154798 CGCAAGAACTCGGGTGAGGA 62.155 60.000 0.00 0.00 43.89 3.71
3490 4423 3.701040 CCCTCCACAAATTTCGATCCAAT 59.299 43.478 0.00 0.00 0.00 3.16
3524 4457 1.429463 GCTCAGTTTGTGGGAGTACG 58.571 55.000 0.00 0.00 0.00 3.67
3525 4458 1.429463 CTCAGTTTGTGGGAGTACGC 58.571 55.000 0.00 0.00 0.00 4.42
3534 4467 0.611062 TGGGAGTACGCACTACTGCT 60.611 55.000 0.00 0.00 42.20 4.24
3578 4511 0.676782 ACGGTAATGGTGCTGGCTTC 60.677 55.000 0.00 0.00 0.00 3.86
3581 4514 1.077787 TAATGGTGCTGGCTTCCGG 60.078 57.895 0.00 0.00 0.00 5.14
3619 4552 6.089249 ACTCTGAATTTTTGGACAATCACC 57.911 37.500 0.00 0.00 0.00 4.02
3631 4564 1.202927 ACAATCACCACAACCTCCTGG 60.203 52.381 0.00 0.00 39.83 4.45
3652 4585 1.677052 CTGCTAAGTACTCCCTCCGTC 59.323 57.143 0.00 0.00 0.00 4.79
3669 4602 4.008330 TCCGTCTCGAAATAAGTGTCTCT 58.992 43.478 0.00 0.00 0.00 3.10
3670 4603 4.094590 TCCGTCTCGAAATAAGTGTCTCTC 59.905 45.833 0.00 0.00 0.00 3.20
3671 4604 4.095185 CCGTCTCGAAATAAGTGTCTCTCT 59.905 45.833 0.00 0.00 0.00 3.10
3715 4664 4.926238 GGGAGTATATGCGTGAATCTTGAG 59.074 45.833 0.00 0.00 0.00 3.02
3747 4696 2.354103 CCTGCCGACTGAAATGAGAAGA 60.354 50.000 0.00 0.00 0.00 2.87
3748 4697 2.928757 CTGCCGACTGAAATGAGAAGAG 59.071 50.000 0.00 0.00 0.00 2.85
3806 4757 2.430694 TCATGTTCTCCATACAGGTCGG 59.569 50.000 0.00 0.00 39.02 4.79
3840 4791 2.159296 TCGTAGTCATGATTCACGTGGG 60.159 50.000 17.00 0.00 36.29 4.61
3869 4820 5.223225 GCATAAGTTGCCTCTCAGTTAAC 57.777 43.478 0.00 0.00 46.15 2.01
3902 4853 0.608130 TGACGCCTCTGTTGCATAGT 59.392 50.000 0.00 0.00 0.00 2.12
3903 4854 1.822371 TGACGCCTCTGTTGCATAGTA 59.178 47.619 0.00 0.00 0.00 1.82
3904 4855 2.159240 TGACGCCTCTGTTGCATAGTAG 60.159 50.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.206115 GCCATTTTTATTCGCCGGCG 61.206 55.000 42.13 42.13 41.35 6.46
20 21 0.179124 TGCCATTTTTATTCGCCGGC 60.179 50.000 19.07 19.07 38.56 6.13
21 22 1.838913 CTGCCATTTTTATTCGCCGG 58.161 50.000 0.00 0.00 0.00 6.13
22 23 1.199624 GCTGCCATTTTTATTCGCCG 58.800 50.000 0.00 0.00 0.00 6.46
23 24 2.584492 AGCTGCCATTTTTATTCGCC 57.416 45.000 0.00 0.00 0.00 5.54
24 25 3.679502 ACAAAGCTGCCATTTTTATTCGC 59.320 39.130 0.00 0.00 0.00 4.70
25 26 4.685628 ACACAAAGCTGCCATTTTTATTCG 59.314 37.500 0.00 0.00 0.00 3.34
26 27 5.695816 TCACACAAAGCTGCCATTTTTATTC 59.304 36.000 0.00 0.00 0.00 1.75
27 28 5.609423 TCACACAAAGCTGCCATTTTTATT 58.391 33.333 0.00 0.00 0.00 1.40
28 29 5.212532 TCACACAAAGCTGCCATTTTTAT 57.787 34.783 0.00 0.00 0.00 1.40
29 30 4.662468 TCACACAAAGCTGCCATTTTTA 57.338 36.364 0.00 0.00 0.00 1.52
30 31 3.540314 TCACACAAAGCTGCCATTTTT 57.460 38.095 0.00 0.00 0.00 1.94
31 32 3.197265 GTTCACACAAAGCTGCCATTTT 58.803 40.909 0.00 0.00 0.00 1.82
32 33 2.483538 GGTTCACACAAAGCTGCCATTT 60.484 45.455 0.00 0.00 0.00 2.32
33 34 1.069049 GGTTCACACAAAGCTGCCATT 59.931 47.619 0.00 0.00 0.00 3.16
34 35 0.675633 GGTTCACACAAAGCTGCCAT 59.324 50.000 0.00 0.00 0.00 4.40
35 36 0.682532 TGGTTCACACAAAGCTGCCA 60.683 50.000 0.00 0.00 0.00 4.92
36 37 0.031178 CTGGTTCACACAAAGCTGCC 59.969 55.000 0.00 0.00 0.00 4.85
37 38 0.031178 CCTGGTTCACACAAAGCTGC 59.969 55.000 0.00 0.00 0.00 5.25
38 39 0.670162 CCCTGGTTCACACAAAGCTG 59.330 55.000 0.00 0.00 0.00 4.24
39 40 0.258774 ACCCTGGTTCACACAAAGCT 59.741 50.000 0.00 0.00 0.00 3.74
40 41 0.385390 CACCCTGGTTCACACAAAGC 59.615 55.000 0.00 0.00 0.00 3.51
41 42 1.032014 CCACCCTGGTTCACACAAAG 58.968 55.000 0.00 0.00 31.35 2.77
42 43 3.199290 CCACCCTGGTTCACACAAA 57.801 52.632 0.00 0.00 31.35 2.83
43 44 4.997884 CCACCCTGGTTCACACAA 57.002 55.556 0.00 0.00 31.35 3.33
53 54 4.039092 CTGCTCCCCACCACCCTG 62.039 72.222 0.00 0.00 0.00 4.45
54 55 4.599500 ACTGCTCCCCACCACCCT 62.599 66.667 0.00 0.00 0.00 4.34
55 56 4.351054 CACTGCTCCCCACCACCC 62.351 72.222 0.00 0.00 0.00 4.61
56 57 3.249189 TCACTGCTCCCCACCACC 61.249 66.667 0.00 0.00 0.00 4.61
57 58 2.348998 CTCACTGCTCCCCACCAC 59.651 66.667 0.00 0.00 0.00 4.16
58 59 3.640407 GCTCACTGCTCCCCACCA 61.640 66.667 0.00 0.00 38.95 4.17
59 60 4.767255 CGCTCACTGCTCCCCACC 62.767 72.222 0.00 0.00 40.11 4.61
60 61 4.767255 CCGCTCACTGCTCCCCAC 62.767 72.222 0.00 0.00 40.11 4.61
77 78 3.869272 CATCTTGCTCCGCACCGC 61.869 66.667 0.00 0.00 38.71 5.68
78 79 3.869272 GCATCTTGCTCCGCACCG 61.869 66.667 0.00 0.00 40.96 4.94
79 80 3.512516 GGCATCTTGCTCCGCACC 61.513 66.667 0.00 0.00 44.28 5.01
80 81 3.869272 CGGCATCTTGCTCCGCAC 61.869 66.667 0.00 0.00 44.28 5.34
84 85 4.838152 TCGCCGGCATCTTGCTCC 62.838 66.667 28.98 0.00 44.28 4.70
85 86 3.267860 CTCGCCGGCATCTTGCTC 61.268 66.667 28.98 0.00 44.28 4.26
86 87 3.729965 CTCTCGCCGGCATCTTGCT 62.730 63.158 28.98 0.00 44.28 3.91
87 88 3.267860 CTCTCGCCGGCATCTTGC 61.268 66.667 28.98 0.00 44.08 4.01
88 89 2.587194 CCTCTCGCCGGCATCTTG 60.587 66.667 28.98 9.94 0.00 3.02
89 90 3.854669 CCCTCTCGCCGGCATCTT 61.855 66.667 28.98 0.00 0.00 2.40
90 91 4.841617 TCCCTCTCGCCGGCATCT 62.842 66.667 28.98 0.00 0.00 2.90
91 92 4.292178 CTCCCTCTCGCCGGCATC 62.292 72.222 28.98 0.00 0.00 3.91
92 93 4.841617 TCTCCCTCTCGCCGGCAT 62.842 66.667 28.98 0.00 0.00 4.40
95 96 2.904866 CTCTCTCCCTCTCGCCGG 60.905 72.222 0.00 0.00 0.00 6.13
96 97 1.891919 CTCTCTCTCCCTCTCGCCG 60.892 68.421 0.00 0.00 0.00 6.46
97 98 1.528309 CCTCTCTCTCCCTCTCGCC 60.528 68.421 0.00 0.00 0.00 5.54
98 99 1.528309 CCCTCTCTCTCCCTCTCGC 60.528 68.421 0.00 0.00 0.00 5.03
99 100 1.528309 GCCCTCTCTCTCCCTCTCG 60.528 68.421 0.00 0.00 0.00 4.04
100 101 1.528309 CGCCCTCTCTCTCCCTCTC 60.528 68.421 0.00 0.00 0.00 3.20
101 102 2.600731 CGCCCTCTCTCTCCCTCT 59.399 66.667 0.00 0.00 0.00 3.69
102 103 3.223589 GCGCCCTCTCTCTCCCTC 61.224 72.222 0.00 0.00 0.00 4.30
103 104 3.387609 ATGCGCCCTCTCTCTCCCT 62.388 63.158 4.18 0.00 0.00 4.20
104 105 2.841988 ATGCGCCCTCTCTCTCCC 60.842 66.667 4.18 0.00 0.00 4.30
105 106 1.680522 TTGATGCGCCCTCTCTCTCC 61.681 60.000 4.18 0.00 0.00 3.71
106 107 0.529555 GTTGATGCGCCCTCTCTCTC 60.530 60.000 4.18 0.00 0.00 3.20
107 108 1.519719 GTTGATGCGCCCTCTCTCT 59.480 57.895 4.18 0.00 0.00 3.10
108 109 1.880340 CGTTGATGCGCCCTCTCTC 60.880 63.158 4.18 0.00 0.00 3.20
109 110 2.185350 CGTTGATGCGCCCTCTCT 59.815 61.111 4.18 0.00 0.00 3.10
110 111 2.892425 CCGTTGATGCGCCCTCTC 60.892 66.667 4.18 0.00 0.00 3.20
111 112 4.473520 CCCGTTGATGCGCCCTCT 62.474 66.667 4.18 0.00 0.00 3.69
115 116 4.467084 TCTCCCCGTTGATGCGCC 62.467 66.667 4.18 0.00 0.00 6.53
116 117 2.892425 CTCTCCCCGTTGATGCGC 60.892 66.667 0.00 0.00 0.00 6.09
117 118 1.227089 CTCTCTCCCCGTTGATGCG 60.227 63.158 0.00 0.00 0.00 4.73
118 119 1.522580 GCTCTCTCCCCGTTGATGC 60.523 63.158 0.00 0.00 0.00 3.91
119 120 1.227089 CGCTCTCTCCCCGTTGATG 60.227 63.158 0.00 0.00 0.00 3.07
120 121 2.427245 CCGCTCTCTCCCCGTTGAT 61.427 63.158 0.00 0.00 0.00 2.57
121 122 3.068691 CCGCTCTCTCCCCGTTGA 61.069 66.667 0.00 0.00 0.00 3.18
122 123 4.821589 GCCGCTCTCTCCCCGTTG 62.822 72.222 0.00 0.00 0.00 4.10
142 143 4.936248 CTCTCTCTCTCGCGCGCG 62.936 72.222 44.84 44.84 41.35 6.86
143 144 4.605967 CCTCTCTCTCTCGCGCGC 62.606 72.222 27.95 23.91 0.00 6.86
144 145 4.605967 GCCTCTCTCTCTCGCGCG 62.606 72.222 26.76 26.76 0.00 6.86
145 146 4.605967 CGCCTCTCTCTCTCGCGC 62.606 72.222 0.00 0.00 36.02 6.86
146 147 2.892914 TCGCCTCTCTCTCTCGCG 60.893 66.667 0.00 0.00 44.00 5.87
147 148 1.817941 AGTCGCCTCTCTCTCTCGC 60.818 63.158 0.00 0.00 0.00 5.03
148 149 1.436195 CCAGTCGCCTCTCTCTCTCG 61.436 65.000 0.00 0.00 0.00 4.04
149 150 0.393808 ACCAGTCGCCTCTCTCTCTC 60.394 60.000 0.00 0.00 0.00 3.20
150 151 0.679640 CACCAGTCGCCTCTCTCTCT 60.680 60.000 0.00 0.00 0.00 3.10
151 152 1.662438 CCACCAGTCGCCTCTCTCTC 61.662 65.000 0.00 0.00 0.00 3.20
152 153 1.680651 CCACCAGTCGCCTCTCTCT 60.681 63.158 0.00 0.00 0.00 3.10
153 154 2.888863 CCACCAGTCGCCTCTCTC 59.111 66.667 0.00 0.00 0.00 3.20
154 155 3.386237 GCCACCAGTCGCCTCTCT 61.386 66.667 0.00 0.00 0.00 3.10
155 156 4.459089 GGCCACCAGTCGCCTCTC 62.459 72.222 0.00 0.00 42.21 3.20
175 176 1.582424 CTCTCTCTCTTGCGCGACG 60.582 63.158 12.10 0.00 0.00 5.12
176 177 0.248054 CTCTCTCTCTCTTGCGCGAC 60.248 60.000 12.10 0.88 0.00 5.19
177 178 0.391793 TCTCTCTCTCTCTTGCGCGA 60.392 55.000 12.10 0.00 0.00 5.87
178 179 0.027979 CTCTCTCTCTCTCTTGCGCG 59.972 60.000 0.00 0.00 0.00 6.86
179 180 1.331756 CTCTCTCTCTCTCTCTTGCGC 59.668 57.143 0.00 0.00 0.00 6.09
180 181 1.942657 CCTCTCTCTCTCTCTCTTGCG 59.057 57.143 0.00 0.00 0.00 4.85
181 182 1.678101 GCCTCTCTCTCTCTCTCTTGC 59.322 57.143 0.00 0.00 0.00 4.01
182 183 1.942657 CGCCTCTCTCTCTCTCTCTTG 59.057 57.143 0.00 0.00 0.00 3.02
183 184 1.837439 TCGCCTCTCTCTCTCTCTCTT 59.163 52.381 0.00 0.00 0.00 2.85
184 185 1.414181 CTCGCCTCTCTCTCTCTCTCT 59.586 57.143 0.00 0.00 0.00 3.10
185 186 1.871080 CTCGCCTCTCTCTCTCTCTC 58.129 60.000 0.00 0.00 0.00 3.20
186 187 0.179045 GCTCGCCTCTCTCTCTCTCT 60.179 60.000 0.00 0.00 0.00 3.10
187 188 1.498865 CGCTCGCCTCTCTCTCTCTC 61.499 65.000 0.00 0.00 0.00 3.20
188 189 1.523711 CGCTCGCCTCTCTCTCTCT 60.524 63.158 0.00 0.00 0.00 3.10
189 190 2.542907 CCGCTCGCCTCTCTCTCTC 61.543 68.421 0.00 0.00 0.00 3.20
190 191 2.515991 CCGCTCGCCTCTCTCTCT 60.516 66.667 0.00 0.00 0.00 3.10
191 192 3.591835 CCCGCTCGCCTCTCTCTC 61.592 72.222 0.00 0.00 0.00 3.20
207 208 4.373116 TCTCTTGCACGACGCCCC 62.373 66.667 0.00 0.00 41.33 5.80
208 209 2.811317 CTCTCTTGCACGACGCCC 60.811 66.667 0.00 0.00 41.33 6.13
209 210 1.803519 CTCTCTCTTGCACGACGCC 60.804 63.158 0.00 0.00 41.33 5.68
210 211 0.796491 CTCTCTCTCTTGCACGACGC 60.796 60.000 0.00 0.00 42.89 5.19
211 212 0.799393 TCTCTCTCTCTTGCACGACG 59.201 55.000 0.00 0.00 0.00 5.12
212 213 2.080693 TCTCTCTCTCTCTTGCACGAC 58.919 52.381 0.00 0.00 0.00 4.34
213 214 2.481289 TCTCTCTCTCTCTTGCACGA 57.519 50.000 0.00 0.00 0.00 4.35
214 215 2.286359 CGATCTCTCTCTCTCTTGCACG 60.286 54.545 0.00 0.00 0.00 5.34
215 216 2.033299 CCGATCTCTCTCTCTCTTGCAC 59.967 54.545 0.00 0.00 0.00 4.57
216 217 2.296792 CCGATCTCTCTCTCTCTTGCA 58.703 52.381 0.00 0.00 0.00 4.08
217 218 1.608590 CCCGATCTCTCTCTCTCTTGC 59.391 57.143 0.00 0.00 0.00 4.01
218 219 2.229792 CCCCGATCTCTCTCTCTCTTG 58.770 57.143 0.00 0.00 0.00 3.02
219 220 1.144913 CCCCCGATCTCTCTCTCTCTT 59.855 57.143 0.00 0.00 0.00 2.85
220 221 0.771127 CCCCCGATCTCTCTCTCTCT 59.229 60.000 0.00 0.00 0.00 3.10
221 222 0.893727 GCCCCCGATCTCTCTCTCTC 60.894 65.000 0.00 0.00 0.00 3.20
222 223 1.152830 GCCCCCGATCTCTCTCTCT 59.847 63.158 0.00 0.00 0.00 3.10
223 224 2.265182 CGCCCCCGATCTCTCTCTC 61.265 68.421 0.00 0.00 36.29 3.20
224 225 2.203422 CGCCCCCGATCTCTCTCT 60.203 66.667 0.00 0.00 36.29 3.10
225 226 2.203365 TCGCCCCCGATCTCTCTC 60.203 66.667 0.00 0.00 38.82 3.20
226 227 2.203422 CTCGCCCCCGATCTCTCT 60.203 66.667 0.00 0.00 43.47 3.10
227 228 2.519780 ACTCGCCCCCGATCTCTC 60.520 66.667 0.00 0.00 43.47 3.20
228 229 2.835431 CACTCGCCCCCGATCTCT 60.835 66.667 0.00 0.00 43.47 3.10
229 230 3.917760 CCACTCGCCCCCGATCTC 61.918 72.222 0.00 0.00 43.47 2.75
239 240 4.803426 CACTCGCTCCCCACTCGC 62.803 72.222 0.00 0.00 0.00 5.03
240 241 4.135153 CCACTCGCTCCCCACTCG 62.135 72.222 0.00 0.00 0.00 4.18
241 242 2.997897 ACCACTCGCTCCCCACTC 60.998 66.667 0.00 0.00 0.00 3.51
242 243 2.997897 GACCACTCGCTCCCCACT 60.998 66.667 0.00 0.00 0.00 4.00
243 244 4.436998 CGACCACTCGCTCCCCAC 62.437 72.222 0.00 0.00 31.91 4.61
246 247 4.436998 CACCGACCACTCGCTCCC 62.437 72.222 0.00 0.00 38.70 4.30
247 248 4.436998 CCACCGACCACTCGCTCC 62.437 72.222 0.00 0.00 38.70 4.70
264 265 4.856607 CTCTTCCTCGCCCGACGC 62.857 72.222 0.00 0.00 43.23 5.19
265 266 4.194720 CCTCTTCCTCGCCCGACG 62.195 72.222 0.00 0.00 45.62 5.12
266 267 3.839432 CCCTCTTCCTCGCCCGAC 61.839 72.222 0.00 0.00 0.00 4.79
269 270 2.687566 TTCCCCTCTTCCTCGCCC 60.688 66.667 0.00 0.00 0.00 6.13
270 271 2.585153 GTTCCCCTCTTCCTCGCC 59.415 66.667 0.00 0.00 0.00 5.54
271 272 2.184579 CGTTCCCCTCTTCCTCGC 59.815 66.667 0.00 0.00 0.00 5.03
272 273 1.215647 CACGTTCCCCTCTTCCTCG 59.784 63.158 0.00 0.00 0.00 4.63
273 274 0.246910 GACACGTTCCCCTCTTCCTC 59.753 60.000 0.00 0.00 0.00 3.71
274 275 1.533469 CGACACGTTCCCCTCTTCCT 61.533 60.000 0.00 0.00 0.00 3.36
275 276 1.080025 CGACACGTTCCCCTCTTCC 60.080 63.158 0.00 0.00 0.00 3.46
276 277 1.080025 CCGACACGTTCCCCTCTTC 60.080 63.158 0.00 0.00 0.00 2.87
277 278 3.057337 CCGACACGTTCCCCTCTT 58.943 61.111 0.00 0.00 0.00 2.85
278 279 3.692406 GCCGACACGTTCCCCTCT 61.692 66.667 0.00 0.00 0.00 3.69
288 289 3.834799 CTACCCCTCCGCCGACAC 61.835 72.222 0.00 0.00 0.00 3.67
289 290 2.866523 ATTCTACCCCTCCGCCGACA 62.867 60.000 0.00 0.00 0.00 4.35
290 291 2.132352 ATTCTACCCCTCCGCCGAC 61.132 63.158 0.00 0.00 0.00 4.79
291 292 2.131709 CATTCTACCCCTCCGCCGA 61.132 63.158 0.00 0.00 0.00 5.54
292 293 2.421739 CATTCTACCCCTCCGCCG 59.578 66.667 0.00 0.00 0.00 6.46
293 294 2.819284 CCCATTCTACCCCTCCGCC 61.819 68.421 0.00 0.00 0.00 6.13
294 295 1.342672 TTCCCATTCTACCCCTCCGC 61.343 60.000 0.00 0.00 0.00 5.54
295 296 1.134189 GTTTCCCATTCTACCCCTCCG 60.134 57.143 0.00 0.00 0.00 4.63
296 297 2.172930 GAGTTTCCCATTCTACCCCTCC 59.827 54.545 0.00 0.00 0.00 4.30
297 298 2.158943 CGAGTTTCCCATTCTACCCCTC 60.159 54.545 0.00 0.00 0.00 4.30
298 299 1.838077 CGAGTTTCCCATTCTACCCCT 59.162 52.381 0.00 0.00 0.00 4.79
299 300 1.134189 CCGAGTTTCCCATTCTACCCC 60.134 57.143 0.00 0.00 0.00 4.95
300 301 1.134189 CCCGAGTTTCCCATTCTACCC 60.134 57.143 0.00 0.00 0.00 3.69
301 302 1.134189 CCCCGAGTTTCCCATTCTACC 60.134 57.143 0.00 0.00 0.00 3.18
302 303 1.835531 TCCCCGAGTTTCCCATTCTAC 59.164 52.381 0.00 0.00 0.00 2.59
303 304 2.257391 TCCCCGAGTTTCCCATTCTA 57.743 50.000 0.00 0.00 0.00 2.10
304 305 1.368374 TTCCCCGAGTTTCCCATTCT 58.632 50.000 0.00 0.00 0.00 2.40
305 306 2.209690 TTTCCCCGAGTTTCCCATTC 57.790 50.000 0.00 0.00 0.00 2.67
306 307 2.687003 TTTTCCCCGAGTTTCCCATT 57.313 45.000 0.00 0.00 0.00 3.16
307 308 2.735151 GATTTTCCCCGAGTTTCCCAT 58.265 47.619 0.00 0.00 0.00 4.00
308 309 1.612199 CGATTTTCCCCGAGTTTCCCA 60.612 52.381 0.00 0.00 0.00 4.37
309 310 1.092348 CGATTTTCCCCGAGTTTCCC 58.908 55.000 0.00 0.00 0.00 3.97
310 311 1.817357 ACGATTTTCCCCGAGTTTCC 58.183 50.000 0.00 0.00 0.00 3.13
311 312 2.350804 GCTACGATTTTCCCCGAGTTTC 59.649 50.000 0.00 0.00 0.00 2.78
312 313 2.353323 GCTACGATTTTCCCCGAGTTT 58.647 47.619 0.00 0.00 0.00 2.66
313 314 1.406477 GGCTACGATTTTCCCCGAGTT 60.406 52.381 0.00 0.00 0.00 3.01
314 315 0.177373 GGCTACGATTTTCCCCGAGT 59.823 55.000 0.00 0.00 0.00 4.18
315 316 0.464452 AGGCTACGATTTTCCCCGAG 59.536 55.000 0.00 0.00 0.00 4.63
316 317 1.410153 GTAGGCTACGATTTTCCCCGA 59.590 52.381 9.23 0.00 0.00 5.14
317 318 1.861971 GTAGGCTACGATTTTCCCCG 58.138 55.000 9.23 0.00 0.00 5.73
328 329 2.257034 CGTCCAACTTTCGTAGGCTAC 58.743 52.381 14.76 14.76 0.00 3.58
329 330 1.403249 GCGTCCAACTTTCGTAGGCTA 60.403 52.381 0.00 0.00 0.00 3.93
330 331 0.669625 GCGTCCAACTTTCGTAGGCT 60.670 55.000 0.00 0.00 0.00 4.58
331 332 1.785951 GCGTCCAACTTTCGTAGGC 59.214 57.895 0.00 0.00 0.00 3.93
332 333 0.665369 ACGCGTCCAACTTTCGTAGG 60.665 55.000 5.58 0.00 0.00 3.18
333 334 0.433492 CACGCGTCCAACTTTCGTAG 59.567 55.000 9.86 0.00 0.00 3.51
334 335 1.550659 GCACGCGTCCAACTTTCGTA 61.551 55.000 9.86 0.00 0.00 3.43
335 336 2.877974 GCACGCGTCCAACTTTCGT 61.878 57.895 9.86 0.00 0.00 3.85
336 337 2.127758 GCACGCGTCCAACTTTCG 60.128 61.111 9.86 0.00 0.00 3.46
337 338 2.127758 CGCACGCGTCCAACTTTC 60.128 61.111 9.86 0.00 34.35 2.62
338 339 3.645975 CCGCACGCGTCCAACTTT 61.646 61.111 9.86 0.00 37.81 2.66
354 355 4.256180 ATCCCGCCCTGAATCGCC 62.256 66.667 0.00 0.00 0.00 5.54
355 356 2.666526 GATCCCGCCCTGAATCGC 60.667 66.667 0.00 0.00 0.00 4.58
356 357 2.356313 CGATCCCGCCCTGAATCG 60.356 66.667 0.00 0.00 0.00 3.34
357 358 1.005630 CTCGATCCCGCCCTGAATC 60.006 63.158 0.00 0.00 35.37 2.52
358 359 3.142393 CTCGATCCCGCCCTGAAT 58.858 61.111 0.00 0.00 35.37 2.57
359 360 3.849951 GCTCGATCCCGCCCTGAA 61.850 66.667 0.00 0.00 35.37 3.02
368 369 4.292178 CTCCTGGCCGCTCGATCC 62.292 72.222 0.00 0.00 0.00 3.36
369 370 4.959596 GCTCCTGGCCGCTCGATC 62.960 72.222 0.00 0.00 34.27 3.69
396 397 0.096454 GCGCACCATTTAGACGGAAC 59.904 55.000 0.30 0.00 0.00 3.62
397 398 1.355796 CGCGCACCATTTAGACGGAA 61.356 55.000 8.75 0.00 0.00 4.30
398 399 1.807981 CGCGCACCATTTAGACGGA 60.808 57.895 8.75 0.00 0.00 4.69
399 400 2.098233 ACGCGCACCATTTAGACGG 61.098 57.895 5.73 0.00 0.00 4.79
400 401 1.058748 CACGCGCACCATTTAGACG 59.941 57.895 5.73 0.00 0.00 4.18
401 402 1.226018 GCACGCGCACCATTTAGAC 60.226 57.895 5.73 0.00 38.36 2.59
402 403 1.669437 TGCACGCGCACCATTTAGA 60.669 52.632 5.73 0.00 45.36 2.10
403 404 2.866750 TGCACGCGCACCATTTAG 59.133 55.556 5.73 0.00 45.36 1.85
412 413 1.963747 AATCTAAAAAGTGCACGCGC 58.036 45.000 12.01 0.00 39.24 6.86
413 414 4.553429 CCTAAAATCTAAAAAGTGCACGCG 59.447 41.667 12.01 3.53 0.00 6.01
414 415 5.458015 ACCTAAAATCTAAAAAGTGCACGC 58.542 37.500 12.01 0.00 0.00 5.34
415 416 9.453325 TTTTACCTAAAATCTAAAAAGTGCACG 57.547 29.630 12.01 0.00 30.83 5.34
455 456 2.083835 ATCCGCCGGGTGATCGTAAG 62.084 60.000 9.67 0.00 33.83 2.34
456 457 2.079020 GATCCGCCGGGTGATCGTAA 62.079 60.000 9.67 0.00 33.83 3.18
457 458 2.520020 ATCCGCCGGGTGATCGTA 60.520 61.111 9.67 0.00 33.83 3.43
458 459 3.912907 GATCCGCCGGGTGATCGT 61.913 66.667 9.67 0.00 33.83 3.73
470 471 1.413382 GACATAGAAGCTGCGATCCG 58.587 55.000 0.00 0.00 0.00 4.18
471 472 1.789506 GGACATAGAAGCTGCGATCC 58.210 55.000 0.00 0.00 0.00 3.36
472 473 1.413382 CGGACATAGAAGCTGCGATC 58.587 55.000 0.00 0.00 0.00 3.69
473 474 0.032678 CCGGACATAGAAGCTGCGAT 59.967 55.000 0.00 0.00 0.00 4.58
474 475 1.437573 CCGGACATAGAAGCTGCGA 59.562 57.895 0.00 0.00 0.00 5.10
475 476 2.240500 GCCGGACATAGAAGCTGCG 61.241 63.158 5.05 0.00 0.00 5.18
476 477 1.153369 TGCCGGACATAGAAGCTGC 60.153 57.895 5.05 0.00 0.00 5.25
477 478 0.811616 GGTGCCGGACATAGAAGCTG 60.812 60.000 5.05 0.00 0.00 4.24
478 479 0.978146 AGGTGCCGGACATAGAAGCT 60.978 55.000 5.05 0.00 0.00 3.74
479 480 0.530870 GAGGTGCCGGACATAGAAGC 60.531 60.000 5.05 0.00 0.00 3.86
480 481 0.105039 GGAGGTGCCGGACATAGAAG 59.895 60.000 5.05 0.00 0.00 2.85
481 482 1.335132 GGGAGGTGCCGGACATAGAA 61.335 60.000 5.05 0.00 37.63 2.10
482 483 1.760875 GGGAGGTGCCGGACATAGA 60.761 63.158 5.05 0.00 37.63 1.98
483 484 2.808206 GGGGAGGTGCCGGACATAG 61.808 68.421 5.05 0.00 37.63 2.23
484 485 2.766651 GGGGAGGTGCCGGACATA 60.767 66.667 5.05 0.00 37.63 2.29
485 486 4.741239 AGGGGAGGTGCCGGACAT 62.741 66.667 5.05 0.00 37.63 3.06
492 493 2.272471 GTAAGGCAGGGGAGGTGC 59.728 66.667 0.00 0.00 40.42 5.01
493 494 1.299976 GTGTAAGGCAGGGGAGGTG 59.700 63.158 0.00 0.00 0.00 4.00
494 495 0.550147 ATGTGTAAGGCAGGGGAGGT 60.550 55.000 0.00 0.00 0.00 3.85
495 496 0.107017 CATGTGTAAGGCAGGGGAGG 60.107 60.000 0.00 0.00 0.00 4.30
496 497 0.620556 ACATGTGTAAGGCAGGGGAG 59.379 55.000 0.00 0.00 0.00 4.30
497 498 0.618458 GACATGTGTAAGGCAGGGGA 59.382 55.000 1.15 0.00 0.00 4.81
498 499 0.620556 AGACATGTGTAAGGCAGGGG 59.379 55.000 1.15 0.00 0.00 4.79
499 500 2.496899 AAGACATGTGTAAGGCAGGG 57.503 50.000 1.15 0.00 0.00 4.45
500 501 3.935203 CACTAAGACATGTGTAAGGCAGG 59.065 47.826 1.15 0.00 0.00 4.85
501 502 4.820897 TCACTAAGACATGTGTAAGGCAG 58.179 43.478 1.15 0.00 35.82 4.85
502 503 4.526650 TCTCACTAAGACATGTGTAAGGCA 59.473 41.667 1.15 0.00 35.82 4.75
503 504 5.073311 TCTCACTAAGACATGTGTAAGGC 57.927 43.478 1.15 0.00 35.82 4.35
504 505 5.105752 GCTCTCACTAAGACATGTGTAAGG 58.894 45.833 1.15 0.00 35.82 2.69
505 506 5.105752 GGCTCTCACTAAGACATGTGTAAG 58.894 45.833 1.15 0.00 35.82 2.34
506 507 4.081642 GGGCTCTCACTAAGACATGTGTAA 60.082 45.833 1.15 0.00 35.82 2.41
507 508 3.447586 GGGCTCTCACTAAGACATGTGTA 59.552 47.826 1.15 0.00 35.82 2.90
508 509 2.234908 GGGCTCTCACTAAGACATGTGT 59.765 50.000 1.15 0.00 35.82 3.72
509 510 2.234661 TGGGCTCTCACTAAGACATGTG 59.765 50.000 1.15 0.00 35.68 3.21
510 511 2.234908 GTGGGCTCTCACTAAGACATGT 59.765 50.000 0.00 0.00 34.98 3.21
511 512 2.234661 TGTGGGCTCTCACTAAGACATG 59.765 50.000 1.26 0.00 38.40 3.21
512 513 2.540383 TGTGGGCTCTCACTAAGACAT 58.460 47.619 1.26 0.00 38.40 3.06
513 514 2.009681 TGTGGGCTCTCACTAAGACA 57.990 50.000 1.26 0.00 38.40 3.41
514 515 3.181474 GGTATGTGGGCTCTCACTAAGAC 60.181 52.174 1.26 0.00 38.40 3.01
515 516 3.031736 GGTATGTGGGCTCTCACTAAGA 58.968 50.000 1.26 0.00 38.40 2.10
516 517 2.223829 CGGTATGTGGGCTCTCACTAAG 60.224 54.545 1.26 0.00 38.40 2.18
517 518 1.754803 CGGTATGTGGGCTCTCACTAA 59.245 52.381 1.26 0.00 38.40 2.24
518 519 1.341679 ACGGTATGTGGGCTCTCACTA 60.342 52.381 1.26 0.00 38.40 2.74
519 520 0.614979 ACGGTATGTGGGCTCTCACT 60.615 55.000 1.26 0.00 38.40 3.41
520 521 0.179108 GACGGTATGTGGGCTCTCAC 60.179 60.000 0.00 0.00 38.09 3.51
521 522 0.324368 AGACGGTATGTGGGCTCTCA 60.324 55.000 0.00 0.00 0.00 3.27
522 523 0.824759 AAGACGGTATGTGGGCTCTC 59.175 55.000 0.00 0.00 0.00 3.20
523 524 1.066143 CAAAGACGGTATGTGGGCTCT 60.066 52.381 0.00 0.00 0.00 4.09
524 525 1.338769 ACAAAGACGGTATGTGGGCTC 60.339 52.381 0.00 0.00 0.00 4.70
525 526 0.690762 ACAAAGACGGTATGTGGGCT 59.309 50.000 0.00 0.00 0.00 5.19
526 527 2.389962 TACAAAGACGGTATGTGGGC 57.610 50.000 0.00 0.00 0.00 5.36
527 528 4.377635 CGTTTTACAAAGACGGTATGTGGG 60.378 45.833 0.00 0.00 33.45 4.61
528 529 4.704457 CGTTTTACAAAGACGGTATGTGG 58.296 43.478 0.00 0.00 33.45 4.17
529 530 4.145997 GCGTTTTACAAAGACGGTATGTG 58.854 43.478 5.12 0.00 37.28 3.21
530 531 3.120923 CGCGTTTTACAAAGACGGTATGT 60.121 43.478 0.00 0.40 37.28 2.29
531 532 3.400995 CGCGTTTTACAAAGACGGTATG 58.599 45.455 0.00 0.00 37.28 2.39
532 533 2.159801 GCGCGTTTTACAAAGACGGTAT 60.160 45.455 8.43 0.00 37.28 2.73
533 534 1.192090 GCGCGTTTTACAAAGACGGTA 59.808 47.619 8.43 0.00 37.28 4.02
534 535 0.041926 GCGCGTTTTACAAAGACGGT 60.042 50.000 8.43 0.00 37.28 4.83
535 536 0.233848 AGCGCGTTTTACAAAGACGG 59.766 50.000 8.43 0.00 37.28 4.79
536 537 1.960549 GAAGCGCGTTTTACAAAGACG 59.039 47.619 10.23 0.00 39.61 4.18
537 538 3.249013 AGAAGCGCGTTTTACAAAGAC 57.751 42.857 10.23 0.00 0.00 3.01
538 539 3.803231 TGTAGAAGCGCGTTTTACAAAGA 59.197 39.130 19.74 5.56 0.00 2.52
539 540 4.123276 TGTAGAAGCGCGTTTTACAAAG 57.877 40.909 19.74 0.00 0.00 2.77
540 541 4.201792 TGTTGTAGAAGCGCGTTTTACAAA 60.202 37.500 27.15 19.93 36.38 2.83
541 542 3.309138 TGTTGTAGAAGCGCGTTTTACAA 59.691 39.130 24.48 24.48 33.29 2.41
542 543 2.864946 TGTTGTAGAAGCGCGTTTTACA 59.135 40.909 10.23 15.91 0.00 2.41
543 544 3.466836 CTGTTGTAGAAGCGCGTTTTAC 58.533 45.455 10.23 13.74 0.00 2.01
544 545 2.477375 CCTGTTGTAGAAGCGCGTTTTA 59.523 45.455 10.23 1.78 0.00 1.52
545 546 1.263217 CCTGTTGTAGAAGCGCGTTTT 59.737 47.619 10.23 3.39 0.00 2.43
546 547 0.865769 CCTGTTGTAGAAGCGCGTTT 59.134 50.000 8.29 8.29 0.00 3.60
547 548 0.032952 TCCTGTTGTAGAAGCGCGTT 59.967 50.000 8.43 0.00 0.00 4.84
548 549 0.388649 CTCCTGTTGTAGAAGCGCGT 60.389 55.000 8.43 0.00 0.00 6.01
549 550 1.687494 GCTCCTGTTGTAGAAGCGCG 61.687 60.000 0.00 0.00 0.00 6.86
550 551 0.390472 AGCTCCTGTTGTAGAAGCGC 60.390 55.000 0.00 0.00 0.00 5.92
551 552 2.941453 TAGCTCCTGTTGTAGAAGCG 57.059 50.000 0.00 0.00 0.00 4.68
552 553 4.130286 ACATAGCTCCTGTTGTAGAAGC 57.870 45.455 0.00 0.00 0.00 3.86
553 554 6.312426 CAGAAACATAGCTCCTGTTGTAGAAG 59.688 42.308 13.59 1.27 36.95 2.85
554 555 6.014584 TCAGAAACATAGCTCCTGTTGTAGAA 60.015 38.462 13.59 0.15 36.95 2.10
555 556 5.480422 TCAGAAACATAGCTCCTGTTGTAGA 59.520 40.000 13.59 9.58 36.95 2.59
556 557 5.724328 TCAGAAACATAGCTCCTGTTGTAG 58.276 41.667 13.59 7.90 36.95 2.74
557 558 5.738619 TCAGAAACATAGCTCCTGTTGTA 57.261 39.130 13.59 0.67 36.95 2.41
558 559 4.623932 TCAGAAACATAGCTCCTGTTGT 57.376 40.909 13.59 6.11 36.95 3.32
559 560 5.239306 TGTTTCAGAAACATAGCTCCTGTTG 59.761 40.000 22.53 4.80 45.79 3.33
560 561 5.376625 TGTTTCAGAAACATAGCTCCTGTT 58.623 37.500 22.53 8.40 45.79 3.16
561 562 4.973168 TGTTTCAGAAACATAGCTCCTGT 58.027 39.130 22.53 0.00 45.79 4.00
572 573 7.359595 TGCAACACTACATATGTTTCAGAAAC 58.640 34.615 14.77 17.85 38.22 2.78
573 574 7.503521 TGCAACACTACATATGTTTCAGAAA 57.496 32.000 14.77 0.00 38.22 2.52
574 575 7.503521 TTGCAACACTACATATGTTTCAGAA 57.496 32.000 14.77 0.00 38.22 3.02
575 576 7.361971 CCATTGCAACACTACATATGTTTCAGA 60.362 37.037 14.77 0.00 38.22 3.27
576 577 6.748658 CCATTGCAACACTACATATGTTTCAG 59.251 38.462 14.77 8.11 38.22 3.02
577 578 6.208402 ACCATTGCAACACTACATATGTTTCA 59.792 34.615 14.77 0.00 38.22 2.69
578 579 6.620678 ACCATTGCAACACTACATATGTTTC 58.379 36.000 14.77 0.00 38.22 2.78
579 580 6.434028 AGACCATTGCAACACTACATATGTTT 59.566 34.615 14.77 0.00 38.22 2.83
580 581 5.945784 AGACCATTGCAACACTACATATGTT 59.054 36.000 14.77 0.00 40.95 2.71
581 582 5.500234 AGACCATTGCAACACTACATATGT 58.500 37.500 13.93 13.93 0.00 2.29
582 583 7.442062 TCATAGACCATTGCAACACTACATATG 59.558 37.037 0.00 0.00 0.00 1.78
583 584 7.508687 TCATAGACCATTGCAACACTACATAT 58.491 34.615 0.00 0.00 0.00 1.78
584 585 6.883744 TCATAGACCATTGCAACACTACATA 58.116 36.000 0.00 0.00 0.00 2.29
585 586 5.744171 TCATAGACCATTGCAACACTACAT 58.256 37.500 0.00 0.00 0.00 2.29
586 587 5.159273 TCATAGACCATTGCAACACTACA 57.841 39.130 0.00 0.00 0.00 2.74
587 588 6.425114 CCTATCATAGACCATTGCAACACTAC 59.575 42.308 0.00 0.00 0.00 2.73
588 589 6.099701 ACCTATCATAGACCATTGCAACACTA 59.900 38.462 0.00 3.83 0.00 2.74
589 590 5.104360 ACCTATCATAGACCATTGCAACACT 60.104 40.000 0.00 1.48 0.00 3.55
590 591 5.126067 ACCTATCATAGACCATTGCAACAC 58.874 41.667 0.00 0.00 0.00 3.32
591 592 5.130975 AGACCTATCATAGACCATTGCAACA 59.869 40.000 0.00 0.00 0.00 3.33
592 593 5.615289 AGACCTATCATAGACCATTGCAAC 58.385 41.667 0.00 0.00 0.00 4.17
593 594 5.894298 AGACCTATCATAGACCATTGCAA 57.106 39.130 0.00 0.00 0.00 4.08
594 595 5.894298 AAGACCTATCATAGACCATTGCA 57.106 39.130 0.00 0.00 0.00 4.08
595 596 7.573968 AAAAAGACCTATCATAGACCATTGC 57.426 36.000 0.00 0.00 0.00 3.56
617 618 7.507672 TCGCAAGACAAATTTCGTTTAAAAA 57.492 28.000 0.00 0.00 45.01 1.94
644 645 2.357637 CCGAGGTCTTGTTGCAGAAAAA 59.642 45.455 0.00 0.00 0.00 1.94
645 646 1.946768 CCGAGGTCTTGTTGCAGAAAA 59.053 47.619 0.00 0.00 0.00 2.29
646 647 1.134220 ACCGAGGTCTTGTTGCAGAAA 60.134 47.619 0.00 0.00 0.00 2.52
647 648 0.468226 ACCGAGGTCTTGTTGCAGAA 59.532 50.000 0.00 0.00 0.00 3.02
648 649 0.468226 AACCGAGGTCTTGTTGCAGA 59.532 50.000 0.00 0.00 0.00 4.26
649 650 0.588252 CAACCGAGGTCTTGTTGCAG 59.412 55.000 0.00 0.00 33.72 4.41
650 651 2.701587 CAACCGAGGTCTTGTTGCA 58.298 52.632 0.00 0.00 33.72 4.08
652 653 1.021202 TTGCAACCGAGGTCTTGTTG 58.979 50.000 0.00 0.00 41.69 3.33
653 654 1.757682 TTTGCAACCGAGGTCTTGTT 58.242 45.000 0.00 0.00 0.00 2.83
654 655 1.757682 TTTTGCAACCGAGGTCTTGT 58.242 45.000 0.00 0.00 0.00 3.16
655 656 2.861462 TTTTTGCAACCGAGGTCTTG 57.139 45.000 0.00 0.00 0.00 3.02
671 672 1.135915 TGCAGGTCGTGTTGCATTTTT 59.864 42.857 6.42 0.00 44.72 1.94
672 673 0.743688 TGCAGGTCGTGTTGCATTTT 59.256 45.000 6.42 0.00 44.72 1.82
673 674 2.413677 TGCAGGTCGTGTTGCATTT 58.586 47.368 6.42 0.00 44.72 2.32
674 675 4.155950 TGCAGGTCGTGTTGCATT 57.844 50.000 6.42 0.00 44.72 3.56
677 678 0.593128 ATTTCTGCAGGTCGTGTTGC 59.407 50.000 15.13 1.81 40.67 4.17
678 679 4.685169 ATTATTTCTGCAGGTCGTGTTG 57.315 40.909 15.13 0.00 0.00 3.33
679 680 5.003804 AGAATTATTTCTGCAGGTCGTGTT 58.996 37.500 15.13 2.98 40.74 3.32
680 681 4.579869 AGAATTATTTCTGCAGGTCGTGT 58.420 39.130 15.13 0.00 40.74 4.49
691 692 5.106157 CCGGTCTTGTTGCAGAATTATTTCT 60.106 40.000 0.00 0.00 43.09 2.52
692 693 5.095490 CCGGTCTTGTTGCAGAATTATTTC 58.905 41.667 0.00 0.00 0.00 2.17
693 694 4.522789 ACCGGTCTTGTTGCAGAATTATTT 59.477 37.500 0.00 0.00 0.00 1.40
694 695 4.079253 ACCGGTCTTGTTGCAGAATTATT 58.921 39.130 0.00 0.00 0.00 1.40
695 696 3.440173 CACCGGTCTTGTTGCAGAATTAT 59.560 43.478 2.59 0.00 0.00 1.28
696 697 2.811431 CACCGGTCTTGTTGCAGAATTA 59.189 45.455 2.59 0.00 0.00 1.40
697 698 1.608590 CACCGGTCTTGTTGCAGAATT 59.391 47.619 2.59 0.00 0.00 2.17
698 699 1.238439 CACCGGTCTTGTTGCAGAAT 58.762 50.000 2.59 0.00 0.00 2.40
699 700 0.107410 ACACCGGTCTTGTTGCAGAA 60.107 50.000 2.59 0.00 0.00 3.02
700 701 0.107410 AACACCGGTCTTGTTGCAGA 60.107 50.000 2.59 0.00 35.82 4.26
701 702 0.029300 CAACACCGGTCTTGTTGCAG 59.971 55.000 19.71 2.66 45.36 4.41
702 703 2.102554 CAACACCGGTCTTGTTGCA 58.897 52.632 19.71 0.00 45.36 4.08
705 706 1.398692 ATTGCAACACCGGTCTTGTT 58.601 45.000 21.60 13.07 37.69 2.83
706 707 2.264005 TATTGCAACACCGGTCTTGT 57.736 45.000 21.60 7.40 0.00 3.16
707 708 3.190327 TCATTATTGCAACACCGGTCTTG 59.810 43.478 17.37 17.37 0.00 3.02
708 709 3.417101 TCATTATTGCAACACCGGTCTT 58.583 40.909 2.59 0.00 0.00 3.01
709 710 3.066291 TCATTATTGCAACACCGGTCT 57.934 42.857 2.59 0.00 0.00 3.85
710 711 3.427503 CCTTCATTATTGCAACACCGGTC 60.428 47.826 2.59 0.00 0.00 4.79
711 712 2.491693 CCTTCATTATTGCAACACCGGT 59.508 45.455 0.00 0.00 0.00 5.28
712 713 2.735126 GCCTTCATTATTGCAACACCGG 60.735 50.000 0.00 0.00 0.00 5.28
713 714 2.094803 TGCCTTCATTATTGCAACACCG 60.095 45.455 0.00 0.00 0.00 4.94
714 715 3.253230 GTGCCTTCATTATTGCAACACC 58.747 45.455 0.00 0.00 35.16 4.16
715 716 2.916716 CGTGCCTTCATTATTGCAACAC 59.083 45.455 0.00 0.77 35.16 3.32
716 717 2.556189 ACGTGCCTTCATTATTGCAACA 59.444 40.909 0.00 0.00 35.16 3.33
717 718 3.216147 ACGTGCCTTCATTATTGCAAC 57.784 42.857 0.00 0.00 35.16 4.17
718 719 3.932545 AACGTGCCTTCATTATTGCAA 57.067 38.095 0.00 0.00 35.16 4.08
719 720 3.254411 TCAAACGTGCCTTCATTATTGCA 59.746 39.130 0.00 0.00 0.00 4.08
720 721 3.832276 TCAAACGTGCCTTCATTATTGC 58.168 40.909 0.00 0.00 0.00 3.56
721 722 3.853671 GCTCAAACGTGCCTTCATTATTG 59.146 43.478 0.00 0.00 0.00 1.90
722 723 3.426159 CGCTCAAACGTGCCTTCATTATT 60.426 43.478 0.00 0.00 0.00 1.40
723 724 2.095853 CGCTCAAACGTGCCTTCATTAT 59.904 45.455 0.00 0.00 0.00 1.28
724 725 1.463056 CGCTCAAACGTGCCTTCATTA 59.537 47.619 0.00 0.00 0.00 1.90
725 726 0.238289 CGCTCAAACGTGCCTTCATT 59.762 50.000 0.00 0.00 0.00 2.57
726 727 1.868997 CGCTCAAACGTGCCTTCAT 59.131 52.632 0.00 0.00 0.00 2.57
727 728 2.892334 GCGCTCAAACGTGCCTTCA 61.892 57.895 0.00 0.00 34.46 3.02
728 729 2.127232 GCGCTCAAACGTGCCTTC 60.127 61.111 0.00 0.00 34.46 3.46
729 730 2.591715 AGCGCTCAAACGTGCCTT 60.592 55.556 2.64 0.00 41.16 4.35
730 731 3.044305 GAGCGCTCAAACGTGCCT 61.044 61.111 31.91 0.00 41.16 4.75
731 732 4.430423 CGAGCGCTCAAACGTGCC 62.430 66.667 34.69 7.57 41.16 5.01
732 733 2.730672 ATCGAGCGCTCAAACGTGC 61.731 57.895 34.69 8.34 40.58 5.34
733 734 1.057822 CATCGAGCGCTCAAACGTG 59.942 57.895 34.69 20.68 34.88 4.49
734 735 2.730672 GCATCGAGCGCTCAAACGT 61.731 57.895 34.69 13.84 34.88 3.99
735 736 2.020559 GCATCGAGCGCTCAAACG 59.979 61.111 34.69 22.62 0.00 3.60
744 745 0.248825 AGATCTGTGTCGCATCGAGC 60.249 55.000 0.00 0.00 36.23 5.03
745 746 1.064654 TCAGATCTGTGTCGCATCGAG 59.935 52.381 21.92 0.00 36.23 4.04
746 747 1.094785 TCAGATCTGTGTCGCATCGA 58.905 50.000 21.92 0.00 0.00 3.59
747 748 2.049959 GATCAGATCTGTGTCGCATCG 58.950 52.381 21.92 0.00 0.00 3.84
748 749 3.051327 CTGATCAGATCTGTGTCGCATC 58.949 50.000 21.92 15.82 0.00 3.91
749 750 2.802415 GCTGATCAGATCTGTGTCGCAT 60.802 50.000 27.04 7.30 0.00 4.73
750 751 1.470458 GCTGATCAGATCTGTGTCGCA 60.470 52.381 27.04 12.44 0.00 5.10
751 752 1.207390 GCTGATCAGATCTGTGTCGC 58.793 55.000 27.04 20.39 0.00 5.19
752 753 1.850377 GGCTGATCAGATCTGTGTCG 58.150 55.000 27.04 16.16 0.00 4.35
753 754 1.537776 CCGGCTGATCAGATCTGTGTC 60.538 57.143 27.04 19.63 0.00 3.67
754 755 0.463204 CCGGCTGATCAGATCTGTGT 59.537 55.000 27.04 12.27 0.00 3.72
755 756 0.879400 GCCGGCTGATCAGATCTGTG 60.879 60.000 27.04 11.80 0.00 3.66
756 757 1.445095 GCCGGCTGATCAGATCTGT 59.555 57.895 27.04 9.83 0.00 3.41
757 758 1.664017 CGCCGGCTGATCAGATCTG 60.664 63.158 27.04 17.07 0.00 2.90
758 759 2.733301 CGCCGGCTGATCAGATCT 59.267 61.111 27.04 0.00 0.00 2.75
759 760 2.356793 CCGCCGGCTGATCAGATC 60.357 66.667 27.04 15.49 0.00 2.75
760 761 2.839632 TCCGCCGGCTGATCAGAT 60.840 61.111 27.04 0.00 0.00 2.90
761 762 3.838271 GTCCGCCGGCTGATCAGA 61.838 66.667 27.04 8.43 0.00 3.27
795 796 5.705609 ATTTGGCTGTCACGTATCTTTTT 57.294 34.783 0.00 0.00 0.00 1.94
796 797 6.597672 TCATATTTGGCTGTCACGTATCTTTT 59.402 34.615 0.00 0.00 0.00 2.27
797 798 6.112734 TCATATTTGGCTGTCACGTATCTTT 58.887 36.000 0.00 0.00 0.00 2.52
798 799 5.670485 TCATATTTGGCTGTCACGTATCTT 58.330 37.500 0.00 0.00 0.00 2.40
799 800 5.276461 TCATATTTGGCTGTCACGTATCT 57.724 39.130 0.00 0.00 0.00 1.98
800 801 7.062371 GTCTATCATATTTGGCTGTCACGTATC 59.938 40.741 0.00 0.00 0.00 2.24
820 821 4.180057 GCGAGGAATCCATGATGTCTATC 58.820 47.826 0.61 0.00 0.00 2.08
825 826 0.882042 GCGCGAGGAATCCATGATGT 60.882 55.000 12.10 0.00 0.00 3.06
848 849 0.802494 GATTACCGCGGGCCATAATG 59.198 55.000 31.76 0.00 0.00 1.90
941 942 5.065346 GCTTCTTCTTCTGTACATAAAGGCC 59.935 44.000 14.71 0.00 0.00 5.19
1050 1107 3.928618 GAGGCGCTGGCGTTTTTCG 62.929 63.158 16.21 0.00 41.24 3.46
1196 1253 0.463620 GTCCCTGTCCTGATCTCTGC 59.536 60.000 0.00 0.00 0.00 4.26
1260 1320 3.496875 CTGCTCCCTGATCGCCTCG 62.497 68.421 0.00 0.00 0.00 4.63
1290 1350 0.110486 TGGGCTTCTTGTCCTTGGAC 59.890 55.000 12.54 12.54 42.07 4.02
1385 1446 2.281484 GCGGAGGCTGGTTGTTGA 60.281 61.111 0.00 0.00 35.83 3.18
1387 1448 2.594592 GTGCGGAGGCTGGTTGTT 60.595 61.111 0.00 0.00 40.82 2.83
1535 1608 3.050275 GCTTGTCCGTCCAGTGCC 61.050 66.667 0.00 0.00 0.00 5.01
1590 1663 4.514577 ATGCCGAAGTCCTCGCGG 62.515 66.667 6.13 0.00 46.71 6.46
1713 1786 2.969238 GCCATCTGGATCGGCGTG 60.969 66.667 6.85 0.00 35.79 5.34
1761 1834 1.737735 CTGAGCAACGCCGATGACA 60.738 57.895 0.00 0.00 0.00 3.58
1773 1846 2.952293 GCCTGAGCCAGTCTGAGCA 61.952 63.158 13.61 3.47 0.00 4.26
1776 1849 0.833409 TCTTGCCTGAGCCAGTCTGA 60.833 55.000 0.00 0.00 38.69 3.27
1782 1855 4.704833 GCGGTCTTGCCTGAGCCA 62.705 66.667 0.70 0.00 38.69 4.75
1799 1872 3.335356 ATGGGGAGCACGAAGGCAG 62.335 63.158 0.00 0.00 35.83 4.85
1800 1873 3.329889 ATGGGGAGCACGAAGGCA 61.330 61.111 0.00 0.00 35.83 4.75
1824 1897 2.669569 GGCATGCGGGCGATGTAT 60.670 61.111 12.44 0.00 33.57 2.29
1923 1996 1.803943 CTTCACCGTCTCCCTCTCG 59.196 63.158 0.00 0.00 0.00 4.04
2004 2077 1.452833 GGCCTGCTTCTGGATGGTC 60.453 63.158 0.00 0.00 0.00 4.02
2007 2080 2.119655 GCTGGCCTGCTTCTGGATG 61.120 63.158 25.99 0.00 0.00 3.51
2115 2188 4.190350 TCGAGCACGACGTAGCTA 57.810 55.556 19.88 7.54 43.81 3.32
2160 2233 1.376037 GACAACCTGGGGCTCGAAG 60.376 63.158 0.00 0.00 0.00 3.79
2169 2242 1.961277 GAGCACACCGACAACCTGG 60.961 63.158 0.00 0.00 0.00 4.45
2217 2290 1.970114 TTCCTCGTCCGCGTTCTCT 60.970 57.895 4.92 0.00 39.49 3.10
2235 2308 0.616111 AAGTCCTCGCCTCATCCAGT 60.616 55.000 0.00 0.00 0.00 4.00
2241 2314 0.039180 TCCTGTAAGTCCTCGCCTCA 59.961 55.000 0.00 0.00 0.00 3.86
2253 2326 1.344065 ACATGTGGGTCGTCCTGTAA 58.656 50.000 0.00 0.00 36.20 2.41
2259 2332 0.719465 CGCTAAACATGTGGGTCGTC 59.281 55.000 0.00 0.00 0.00 4.20
2384 2457 0.034896 GACCTTCACCATGACCACGT 59.965 55.000 0.00 0.00 0.00 4.49
2406 2479 0.036732 TGAGCCGTGGCATCTTTTCT 59.963 50.000 14.29 0.00 44.88 2.52
2409 2482 0.036732 TCTTGAGCCGTGGCATCTTT 59.963 50.000 14.29 0.00 44.88 2.52
2487 2560 1.671742 GGTGAGCTTCTCCACGGAA 59.328 57.895 0.00 0.00 30.74 4.30
2488 2561 2.283529 GGGTGAGCTTCTCCACGGA 61.284 63.158 0.00 0.00 31.92 4.69
2523 2596 4.265056 GTGACCCGGCACAACCCT 62.265 66.667 7.28 0.00 38.63 4.34
2545 2618 2.125912 CGACTTCCCTCCGTGCAG 60.126 66.667 0.00 0.00 0.00 4.41
2601 2715 1.671379 GAGGACGTTGAACCTGCCC 60.671 63.158 0.00 0.00 36.57 5.36
2667 2781 3.492383 GCATCTCGTAGTTGATCACATGG 59.508 47.826 0.00 0.00 0.00 3.66
2670 2784 2.760650 AGGCATCTCGTAGTTGATCACA 59.239 45.455 0.00 0.00 0.00 3.58
2727 2841 4.572571 TTTCCTGCACGCCCGGTT 62.573 61.111 0.00 0.00 0.00 4.44
2730 2844 2.668212 TTCTTTCCTGCACGCCCG 60.668 61.111 0.00 0.00 0.00 6.13
2736 2850 1.136329 AGAGCCCCTTCTTTCCTGCA 61.136 55.000 0.00 0.00 0.00 4.41
2739 2853 0.252284 TCGAGAGCCCCTTCTTTCCT 60.252 55.000 0.00 0.00 0.00 3.36
2742 2856 1.208293 GATGTCGAGAGCCCCTTCTTT 59.792 52.381 0.00 0.00 0.00 2.52
2772 2886 3.648067 AGAAAATGTCAGTGTCCTCCAGA 59.352 43.478 0.00 0.00 0.00 3.86
2860 2974 0.535102 CCTGGCTTGAACTTGGACGT 60.535 55.000 0.00 0.00 0.00 4.34
2877 2991 2.535836 GTCTACCAGGAAGAGACCCT 57.464 55.000 0.00 0.00 34.72 4.34
2884 2998 1.064611 TCTCGGAGGTCTACCAGGAAG 60.065 57.143 4.96 0.00 38.89 3.46
2910 3024 1.451207 GTATGCATGGACGGTGCCA 60.451 57.895 10.16 0.00 41.83 4.92
2911 3025 2.186826 GGTATGCATGGACGGTGCC 61.187 63.158 10.16 0.00 41.83 5.01
2992 3106 2.912956 ACCCCTCACATTCTAGCAGAAA 59.087 45.455 3.27 0.00 37.82 2.52
3033 3147 5.537188 TCAAATGGTTCAAATGGTTAGTGC 58.463 37.500 0.00 0.00 0.00 4.40
3038 3152 5.365021 TGGTTCAAATGGTTCAAATGGTT 57.635 34.783 0.00 0.00 0.00 3.67
3039 3153 5.565455 ATGGTTCAAATGGTTCAAATGGT 57.435 34.783 0.00 0.00 0.00 3.55
3040 3154 6.880942 AAATGGTTCAAATGGTTCAAATGG 57.119 33.333 0.00 0.00 0.00 3.16
3043 3157 9.401058 ACAATAAAATGGTTCAAATGGTTCAAA 57.599 25.926 0.00 0.00 0.00 2.69
3044 3158 8.970859 ACAATAAAATGGTTCAAATGGTTCAA 57.029 26.923 0.00 0.00 0.00 2.69
3045 3159 8.206867 TGACAATAAAATGGTTCAAATGGTTCA 58.793 29.630 0.00 0.00 0.00 3.18
3046 3160 8.600449 TGACAATAAAATGGTTCAAATGGTTC 57.400 30.769 0.00 0.00 0.00 3.62
3079 3193 6.866770 TCAAACCAAATGTTCGTTTTACAACA 59.133 30.769 0.00 0.00 35.67 3.33
3115 3229 6.870965 TGCATAAATCAACCACCAAAATACAC 59.129 34.615 0.00 0.00 0.00 2.90
3123 3237 2.225242 ACCCTGCATAAATCAACCACCA 60.225 45.455 0.00 0.00 0.00 4.17
3124 3238 2.456577 ACCCTGCATAAATCAACCACC 58.543 47.619 0.00 0.00 0.00 4.61
3127 3241 4.646492 AGATGAACCCTGCATAAATCAACC 59.354 41.667 0.00 0.00 0.00 3.77
3170 3284 6.522054 AGGACTACAATATAATGTTGACCGG 58.478 40.000 14.39 0.00 42.23 5.28
3237 3352 4.946784 AAAGCTGCAAAATAGAGTACCG 57.053 40.909 1.02 0.00 0.00 4.02
3238 3353 5.324697 CGAAAAGCTGCAAAATAGAGTACC 58.675 41.667 1.02 0.00 0.00 3.34
3367 4300 7.502120 TTGTCCCGTATGAGTAGTAGATTAC 57.498 40.000 0.00 0.00 0.00 1.89
3382 4315 0.604073 TCTGTGCGAATTGTCCCGTA 59.396 50.000 0.00 0.00 0.00 4.02
3397 4330 2.041686 GCGTCGTCTCCTCCTCTGT 61.042 63.158 0.00 0.00 0.00 3.41
3398 4331 2.766400 GGCGTCGTCTCCTCCTCTG 61.766 68.421 0.00 0.00 0.00 3.35
3399 4332 2.438795 GGCGTCGTCTCCTCCTCT 60.439 66.667 0.00 0.00 0.00 3.69
3442 4375 0.528470 CTCAGTCCTCACCCGAGTTC 59.472 60.000 0.00 0.00 37.59 3.01
3444 4377 1.304547 CCTCAGTCCTCACCCGAGT 60.305 63.158 0.00 0.00 37.59 4.18
3445 4378 1.000771 TCCTCAGTCCTCACCCGAG 60.001 63.158 0.00 0.00 39.16 4.63
3446 4379 1.000771 CTCCTCAGTCCTCACCCGA 60.001 63.158 0.00 0.00 0.00 5.14
3447 4380 0.034380 TACTCCTCAGTCCTCACCCG 60.034 60.000 0.00 0.00 33.62 5.28
3450 4383 1.476477 GGGTACTCCTCAGTCCTCAC 58.524 60.000 0.00 0.00 33.62 3.51
3451 4384 0.335361 GGGGTACTCCTCAGTCCTCA 59.665 60.000 3.84 0.00 33.58 3.86
3452 4385 0.632294 AGGGGTACTCCTCAGTCCTC 59.368 60.000 9.09 0.00 36.47 3.71
3453 4386 2.822118 AGGGGTACTCCTCAGTCCT 58.178 57.895 9.09 0.00 36.47 3.85
3498 4431 0.100325 CCACAAACTGAGCGCAACAA 59.900 50.000 11.47 0.00 0.00 2.83
3499 4432 1.723608 CCCACAAACTGAGCGCAACA 61.724 55.000 11.47 8.79 0.00 3.33
3525 4458 4.820897 TCAGTAAATCACCAGCAGTAGTG 58.179 43.478 0.00 0.00 35.24 2.74
3534 4467 5.559770 TCTGCTGAAATCAGTAAATCACCA 58.440 37.500 11.77 0.00 45.45 4.17
3560 4493 1.376609 GGAAGCCAGCACCATTACCG 61.377 60.000 0.00 0.00 0.00 4.02
3561 4494 1.376609 CGGAAGCCAGCACCATTACC 61.377 60.000 6.67 0.00 0.00 2.85
3578 4511 2.498941 TAGAGGAAGATGCGGCCGG 61.499 63.158 29.38 8.95 0.00 6.13
3581 4514 1.036707 AGAGTAGAGGAAGATGCGGC 58.963 55.000 0.00 0.00 0.00 6.53
3589 4522 6.837312 TGTCCAAAAATTCAGAGTAGAGGAA 58.163 36.000 0.00 0.00 0.00 3.36
3619 4552 0.036732 TTAGCAGCCAGGAGGTTGTG 59.963 55.000 0.00 0.00 46.80 3.33
3631 4564 0.386113 CGGAGGGAGTACTTAGCAGC 59.614 60.000 0.00 0.00 0.00 5.25
3652 4585 7.728580 GTGTAAGAGAGACACTTATTTCGAG 57.271 40.000 0.00 0.00 43.19 4.04
3669 4602 3.763360 TCCGTCCCGAAATAAGTGTAAGA 59.237 43.478 0.00 0.00 0.00 2.10
3670 4603 4.110482 CTCCGTCCCGAAATAAGTGTAAG 58.890 47.826 0.00 0.00 0.00 2.34
3671 4604 3.119029 CCTCCGTCCCGAAATAAGTGTAA 60.119 47.826 0.00 0.00 0.00 2.41
3715 4664 4.347453 CGGCAGGGCACACAAAGC 62.347 66.667 0.00 0.00 0.00 3.51
3758 4707 4.022589 CCTGATGGCATTATTGTGTCCATC 60.023 45.833 0.00 11.46 44.28 3.51
3806 4757 2.232399 GACTACGATCCCTCCTCCTTC 58.768 57.143 0.00 0.00 0.00 3.46
3860 4811 5.348179 CAGAGATGCAGAACTGTTAACTGAG 59.652 44.000 18.21 5.52 34.07 3.35
3869 4820 0.997932 GCGTCAGAGATGCAGAACTG 59.002 55.000 6.35 9.53 43.32 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.