Multiple sequence alignment - TraesCS1A01G411600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G411600 chr1A 100.000 7169 0 0 926 8094 572213037 572205869 0.000000e+00 13239
1 TraesCS1A01G411600 chr1A 100.000 420 0 0 1 420 572213962 572213543 0.000000e+00 776
2 TraesCS1A01G411600 chr1A 80.754 1008 107 37 6791 7762 572075857 572074901 0.000000e+00 706
3 TraesCS1A01G411600 chr1A 89.583 144 14 1 1155 1298 581580720 581580862 1.790000e-41 182
4 TraesCS1A01G411600 chr1B 92.221 6980 281 109 929 7772 662671644 662664791 0.000000e+00 9640
5 TraesCS1A01G411600 chr1B 88.194 432 29 12 5978 6400 683138234 683138652 5.640000e-136 496
6 TraesCS1A01G411600 chr1B 84.463 354 32 17 71 407 662672006 662671659 2.180000e-85 327
7 TraesCS1A01G411600 chr1B 78.097 452 39 25 7013 7420 662619915 662619480 1.760000e-56 231
8 TraesCS1A01G411600 chr1B 82.990 194 26 2 5759 5946 662607409 662607217 1.400000e-37 169
9 TraesCS1A01G411600 chr1B 95.349 86 3 1 5894 5979 683137895 683137979 1.420000e-27 135
10 TraesCS1A01G411600 chr1D 95.434 5322 173 30 2496 7772 476441642 476436346 0.000000e+00 8418
11 TraesCS1A01G411600 chr1D 92.194 679 30 10 1830 2500 476442356 476441693 0.000000e+00 939
12 TraesCS1A01G411600 chr1D 87.677 779 32 29 929 1677 476443100 476442356 0.000000e+00 848
13 TraesCS1A01G411600 chr1D 88.314 599 34 14 5243 5828 460611367 460611942 0.000000e+00 686
14 TraesCS1A01G411600 chr1D 79.408 845 88 37 6857 7658 476415579 476414778 1.200000e-142 518
15 TraesCS1A01G411600 chr1D 83.978 362 35 16 62 407 476443469 476443115 7.830000e-85 326
16 TraesCS1A01G411600 chr1D 84.727 275 12 7 5867 6127 460611940 460612198 1.740000e-61 248
17 TraesCS1A01G411600 chr1D 80.667 300 52 4 7471 7770 476423563 476423270 2.270000e-55 228
18 TraesCS1A01G411600 chr1D 89.583 144 14 1 1155 1298 484399044 484399186 1.790000e-41 182
19 TraesCS1A01G411600 chr7A 91.429 315 25 2 7781 8094 260001017 260000704 1.610000e-116 431
20 TraesCS1A01G411600 chr7A 89.937 318 30 2 7778 8094 56138440 56138124 7.560000e-110 409
21 TraesCS1A01G411600 chr7D 91.429 315 24 3 7781 8094 561738049 561738361 5.800000e-116 429
22 TraesCS1A01G411600 chr3D 90.159 315 29 2 7781 8094 452368730 452369043 7.560000e-110 409
23 TraesCS1A01G411600 chr3D 91.030 301 24 3 7781 8080 23157496 23157794 3.520000e-108 403
24 TraesCS1A01G411600 chr5D 91.060 302 25 2 7765 8065 377147849 377148149 2.720000e-109 407
25 TraesCS1A01G411600 chr6D 89.841 315 29 3 7781 8094 336516308 336515996 1.270000e-107 401
26 TraesCS1A01G411600 chr7B 88.957 326 32 4 7769 8093 166624899 166625221 4.550000e-107 399
27 TraesCS1A01G411600 chr6A 88.685 327 33 4 7769 8094 596353868 596353545 5.890000e-106 396


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G411600 chr1A 572205869 572213962 8093 True 7007.50 13239 100.00000 1 8094 2 chr1A.!!$R2 8093
1 TraesCS1A01G411600 chr1A 572074901 572075857 956 True 706.00 706 80.75400 6791 7762 1 chr1A.!!$R1 971
2 TraesCS1A01G411600 chr1B 662664791 662672006 7215 True 4983.50 9640 88.34200 71 7772 2 chr1B.!!$R3 7701
3 TraesCS1A01G411600 chr1B 683137895 683138652 757 False 315.50 496 91.77150 5894 6400 2 chr1B.!!$F1 506
4 TraesCS1A01G411600 chr1D 476436346 476443469 7123 True 2632.75 8418 89.82075 62 7772 4 chr1D.!!$R3 7710
5 TraesCS1A01G411600 chr1D 476414778 476415579 801 True 518.00 518 79.40800 6857 7658 1 chr1D.!!$R1 801
6 TraesCS1A01G411600 chr1D 460611367 460612198 831 False 467.00 686 86.52050 5243 6127 2 chr1D.!!$F2 884

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
187 192 0.036388 AATCAATCGTGACCTGCGGT 60.036 50.000 0.00 0.00 39.44 5.68 F
1007 1029 1.010046 TCCCTCCCCTCTCATTCACAT 59.990 52.381 0.00 0.00 0.00 3.21 F
1868 1944 0.392706 TGGTGAGTGATGTCTGCGTT 59.607 50.000 0.00 0.00 0.00 4.84 F
2678 2827 0.541392 AGGATAATGCCACGTCAGCA 59.459 50.000 11.88 11.88 45.94 4.41 F
2983 3133 1.134098 ACCAGTCTTTGTCCCAGTGTG 60.134 52.381 0.00 0.00 0.00 3.82 F
3852 4036 1.792006 CCGCGTAGGTGAGAAAAAGT 58.208 50.000 4.92 0.00 34.51 2.66 F
5082 5269 0.395173 AAGTGTTCCTTGGCGTGGTT 60.395 50.000 0.00 0.00 30.18 3.67 F
5817 6025 0.244721 GCTCCAAAACTCACATGGGC 59.755 55.000 0.00 0.00 34.89 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1072 1094 0.113190 CTTCTTGCCTTCTTGGGGGT 59.887 55.000 0.00 0.00 36.00 4.95 R
2502 2651 0.519077 GTGCAGGACAAACAGCTAGC 59.481 55.000 6.62 6.62 0.00 3.42 R
2882 3032 0.684535 TGATGTCCAGAAACCGCTCA 59.315 50.000 0.00 0.00 0.00 4.26 R
3575 3759 0.937304 CAACCGGATTCATAGCCACG 59.063 55.000 9.46 0.00 0.00 4.94 R
4542 4727 1.203052 GGGATGTGCCAGATGTTTGTG 59.797 52.381 0.00 0.00 38.95 3.33 R
5772 5980 0.610232 GAGGCATTGTGGAAGGTGCT 60.610 55.000 0.00 0.00 37.70 4.40 R
6484 7000 0.237761 GATGCAGCGATCAATCCTGC 59.762 55.000 18.64 18.64 44.31 4.85 R
7811 8391 0.177141 AAATGGCTGCATGCATCACC 59.823 50.000 22.97 22.12 45.15 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.422597 CAATCCTTACGCACTTGTCCA 58.577 47.619 0.00 0.00 0.00 4.02
21 22 2.811431 CAATCCTTACGCACTTGTCCAA 59.189 45.455 0.00 0.00 0.00 3.53
22 23 1.873698 TCCTTACGCACTTGTCCAAC 58.126 50.000 0.00 0.00 0.00 3.77
23 24 0.872388 CCTTACGCACTTGTCCAACC 59.128 55.000 0.00 0.00 0.00 3.77
24 25 1.542547 CCTTACGCACTTGTCCAACCT 60.543 52.381 0.00 0.00 0.00 3.50
25 26 2.218603 CTTACGCACTTGTCCAACCTT 58.781 47.619 0.00 0.00 0.00 3.50
26 27 2.335316 TACGCACTTGTCCAACCTTT 57.665 45.000 0.00 0.00 0.00 3.11
27 28 0.738389 ACGCACTTGTCCAACCTTTG 59.262 50.000 0.00 0.00 0.00 2.77
28 29 1.021202 CGCACTTGTCCAACCTTTGA 58.979 50.000 0.00 0.00 0.00 2.69
29 30 1.002468 CGCACTTGTCCAACCTTTGAG 60.002 52.381 0.00 0.00 0.00 3.02
30 31 1.269257 GCACTTGTCCAACCTTTGAGC 60.269 52.381 0.00 0.00 0.00 4.26
31 32 2.023673 CACTTGTCCAACCTTTGAGCA 58.976 47.619 0.00 0.00 0.00 4.26
32 33 2.426738 CACTTGTCCAACCTTTGAGCAA 59.573 45.455 0.00 0.00 0.00 3.91
33 34 3.068590 CACTTGTCCAACCTTTGAGCAAT 59.931 43.478 0.00 0.00 0.00 3.56
34 35 3.706086 ACTTGTCCAACCTTTGAGCAATT 59.294 39.130 0.00 0.00 0.00 2.32
35 36 4.162131 ACTTGTCCAACCTTTGAGCAATTT 59.838 37.500 0.00 0.00 0.00 1.82
36 37 4.057406 TGTCCAACCTTTGAGCAATTTG 57.943 40.909 0.00 0.00 0.00 2.32
37 38 3.450457 TGTCCAACCTTTGAGCAATTTGT 59.550 39.130 0.00 0.00 0.00 2.83
38 39 3.803778 GTCCAACCTTTGAGCAATTTGTG 59.196 43.478 0.00 0.00 0.00 3.33
46 47 2.738139 GCAATTTGTGCGTGGCCC 60.738 61.111 0.00 0.00 45.10 5.80
47 48 2.430582 CAATTTGTGCGTGGCCCG 60.431 61.111 0.00 4.49 40.40 6.13
48 49 2.909965 AATTTGTGCGTGGCCCGT 60.910 55.556 13.97 0.00 39.32 5.28
49 50 2.494530 AATTTGTGCGTGGCCCGTT 61.495 52.632 13.97 0.00 39.32 4.44
50 51 2.022240 AATTTGTGCGTGGCCCGTTT 62.022 50.000 13.97 0.00 39.32 3.60
51 52 2.691674 ATTTGTGCGTGGCCCGTTTG 62.692 55.000 13.97 0.00 39.32 2.93
54 55 4.627801 TGCGTGGCCCGTTTGCTA 62.628 61.111 13.97 0.00 39.32 3.49
55 56 3.358707 GCGTGGCCCGTTTGCTAA 61.359 61.111 13.97 0.00 39.32 3.09
56 57 2.910345 GCGTGGCCCGTTTGCTAAA 61.910 57.895 13.97 0.00 39.32 1.85
57 58 1.655329 CGTGGCCCGTTTGCTAAAA 59.345 52.632 0.00 0.00 0.00 1.52
58 59 0.242555 CGTGGCCCGTTTGCTAAAAT 59.757 50.000 0.00 0.00 0.00 1.82
59 60 1.708822 GTGGCCCGTTTGCTAAAATG 58.291 50.000 0.00 0.00 32.89 2.32
69 70 0.393808 TGCTAAAATGGGGGCTCGAC 60.394 55.000 0.00 0.00 0.00 4.20
96 99 2.251371 GCTTTTGCGTGTCCGACC 59.749 61.111 0.00 0.00 35.63 4.79
115 118 4.319911 CGACCGGCAGAAAAATTGAACTAA 60.320 41.667 0.00 0.00 0.00 2.24
125 128 6.364976 AGAAAAATTGAACTAAAATTCCCGCG 59.635 34.615 0.00 0.00 0.00 6.46
140 143 2.506217 GCGCACTCGAACCGATCA 60.506 61.111 0.30 0.00 38.10 2.92
143 146 1.006825 CGCACTCGAACCGATCAACA 61.007 55.000 0.00 0.00 38.10 3.33
144 147 1.359848 GCACTCGAACCGATCAACAT 58.640 50.000 0.00 0.00 34.61 2.71
145 148 2.536365 GCACTCGAACCGATCAACATA 58.464 47.619 0.00 0.00 34.61 2.29
146 149 2.535984 GCACTCGAACCGATCAACATAG 59.464 50.000 0.00 0.00 34.61 2.23
147 150 3.770666 CACTCGAACCGATCAACATAGT 58.229 45.455 0.00 0.00 34.61 2.12
148 151 4.732647 GCACTCGAACCGATCAACATAGTA 60.733 45.833 0.00 0.00 34.61 1.82
149 152 5.520632 CACTCGAACCGATCAACATAGTAT 58.479 41.667 0.00 0.00 34.61 2.12
151 156 5.117355 TCGAACCGATCAACATAGTATCC 57.883 43.478 0.00 0.00 0.00 2.59
153 158 5.068067 TCGAACCGATCAACATAGTATCCAA 59.932 40.000 0.00 0.00 0.00 3.53
166 171 8.396272 ACATAGTATCCAAATAATCAAGCCAC 57.604 34.615 0.00 0.00 0.00 5.01
167 172 8.220559 ACATAGTATCCAAATAATCAAGCCACT 58.779 33.333 0.00 0.00 0.00 4.00
171 176 9.289782 AGTATCCAAATAATCAAGCCACTAATC 57.710 33.333 0.00 0.00 0.00 1.75
177 182 7.807977 AATAATCAAGCCACTAATCAATCGT 57.192 32.000 0.00 0.00 0.00 3.73
182 187 2.501723 AGCCACTAATCAATCGTGACCT 59.498 45.455 0.00 0.00 36.31 3.85
184 189 2.609459 CCACTAATCAATCGTGACCTGC 59.391 50.000 0.00 0.00 36.31 4.85
187 192 0.036388 AATCAATCGTGACCTGCGGT 60.036 50.000 0.00 0.00 39.44 5.68
210 223 3.567797 GCGCGGCAAGGTGAGATC 61.568 66.667 8.83 0.00 0.00 2.75
393 413 2.666994 GAGGCGCTACACTTTCAGTTAC 59.333 50.000 7.64 0.00 0.00 2.50
407 428 6.592607 ACTTTCAGTTACGAGTAGAGAGAGAG 59.407 42.308 0.00 0.00 0.00 3.20
408 429 5.918426 TCAGTTACGAGTAGAGAGAGAGA 57.082 43.478 0.00 0.00 0.00 3.10
412 433 5.889853 AGTTACGAGTAGAGAGAGAGAGAGA 59.110 44.000 0.00 0.00 0.00 3.10
414 435 4.533815 ACGAGTAGAGAGAGAGAGAGAGA 58.466 47.826 0.00 0.00 0.00 3.10
415 436 4.580995 ACGAGTAGAGAGAGAGAGAGAGAG 59.419 50.000 0.00 0.00 0.00 3.20
416 437 4.822350 CGAGTAGAGAGAGAGAGAGAGAGA 59.178 50.000 0.00 0.00 0.00 3.10
417 438 5.049060 CGAGTAGAGAGAGAGAGAGAGAGAG 60.049 52.000 0.00 0.00 0.00 3.20
418 439 6.019656 AGTAGAGAGAGAGAGAGAGAGAGA 57.980 45.833 0.00 0.00 0.00 3.10
419 440 6.068010 AGTAGAGAGAGAGAGAGAGAGAGAG 58.932 48.000 0.00 0.00 0.00 3.20
1007 1029 1.010046 TCCCTCCCCTCTCATTCACAT 59.990 52.381 0.00 0.00 0.00 3.21
1008 1030 1.419387 CCCTCCCCTCTCATTCACATC 59.581 57.143 0.00 0.00 0.00 3.06
1046 1068 3.670629 CTCGGCCACTCCCTCTCCT 62.671 68.421 2.24 0.00 0.00 3.69
1048 1070 2.766229 GGCCACTCCCTCTCCTCC 60.766 72.222 0.00 0.00 0.00 4.30
1050 1072 2.041405 CCACTCCCTCTCCTCCCC 60.041 72.222 0.00 0.00 0.00 4.81
1051 1073 2.041405 CACTCCCTCTCCTCCCCC 60.041 72.222 0.00 0.00 0.00 5.40
1072 1094 1.692749 CCCTCCCCCATTCTCCGAA 60.693 63.158 0.00 0.00 0.00 4.30
1080 1102 0.394352 CCATTCTCCGAACCCCCAAG 60.394 60.000 0.00 0.00 0.00 3.61
1081 1103 0.618458 CATTCTCCGAACCCCCAAGA 59.382 55.000 0.00 0.00 0.00 3.02
1082 1104 1.004277 CATTCTCCGAACCCCCAAGAA 59.996 52.381 0.00 0.00 0.00 2.52
1083 1105 0.690762 TTCTCCGAACCCCCAAGAAG 59.309 55.000 0.00 0.00 0.00 2.85
1084 1106 1.198759 TCTCCGAACCCCCAAGAAGG 61.199 60.000 0.00 0.00 37.03 3.46
1085 1107 2.361230 CCGAACCCCCAAGAAGGC 60.361 66.667 0.00 0.00 35.39 4.35
1086 1108 2.434331 CGAACCCCCAAGAAGGCA 59.566 61.111 0.00 0.00 35.39 4.75
1136 1158 4.996434 GCTGCCAGTGCGGTGAGT 62.996 66.667 0.00 0.00 46.11 3.41
1340 1381 2.750237 GCCGCCGGTTCTCCATTT 60.750 61.111 4.45 0.00 0.00 2.32
1341 1382 2.761195 GCCGCCGGTTCTCCATTTC 61.761 63.158 4.45 0.00 0.00 2.17
1357 1398 5.610398 TCCATTTCTTTCTTTCTTTTGCCC 58.390 37.500 0.00 0.00 0.00 5.36
1549 1607 3.596214 GCAGCAGCTAGGTTAGTTAACA 58.404 45.455 8.61 0.00 36.47 2.41
1600 1666 7.411912 GGTTAATTACTCGTACGGTTTTCTTCC 60.412 40.741 16.52 5.64 0.00 3.46
1689 1755 6.378661 TGCAGGCCAGTAATATGATATTCT 57.621 37.500 5.01 0.00 0.00 2.40
1707 1773 2.050144 TCTGAACTGTTCCCTCTGCTT 58.950 47.619 17.26 0.00 0.00 3.91
1708 1774 2.037772 TCTGAACTGTTCCCTCTGCTTC 59.962 50.000 17.26 0.00 0.00 3.86
1709 1775 1.072331 TGAACTGTTCCCTCTGCTTCC 59.928 52.381 17.26 0.00 0.00 3.46
1710 1776 1.349357 GAACTGTTCCCTCTGCTTCCT 59.651 52.381 9.38 0.00 0.00 3.36
1711 1777 0.980423 ACTGTTCCCTCTGCTTCCTC 59.020 55.000 0.00 0.00 0.00 3.71
1712 1778 1.274712 CTGTTCCCTCTGCTTCCTCT 58.725 55.000 0.00 0.00 0.00 3.69
1713 1779 0.979665 TGTTCCCTCTGCTTCCTCTG 59.020 55.000 0.00 0.00 0.00 3.35
1714 1780 0.980423 GTTCCCTCTGCTTCCTCTGT 59.020 55.000 0.00 0.00 0.00 3.41
1721 1787 4.080638 CCCTCTGCTTCCTCTGTCTATTTT 60.081 45.833 0.00 0.00 0.00 1.82
1748 1814 3.313526 ACATGTGCTTCCGCTATTTCATC 59.686 43.478 0.00 0.00 36.97 2.92
1751 1817 3.374988 TGTGCTTCCGCTATTTCATCTTG 59.625 43.478 0.00 0.00 36.97 3.02
1766 1835 4.433615 TCATCTTGCCGAGACACTTATTC 58.566 43.478 0.00 0.00 37.17 1.75
1782 1851 4.075793 TCTGGGACGGAGGGGAGG 62.076 72.222 0.00 0.00 39.80 4.30
1785 1854 4.862823 GGGACGGAGGGGAGGGAG 62.863 77.778 0.00 0.00 0.00 4.30
1787 1856 2.760385 GACGGAGGGGAGGGAGTG 60.760 72.222 0.00 0.00 0.00 3.51
1807 1876 2.303175 GCTACTCTCTCCATCGGTTCT 58.697 52.381 0.00 0.00 0.00 3.01
1811 1880 2.232452 ACTCTCTCCATCGGTTCTTGTG 59.768 50.000 0.00 0.00 0.00 3.33
1812 1881 2.232452 CTCTCTCCATCGGTTCTTGTGT 59.768 50.000 0.00 0.00 0.00 3.72
1813 1882 2.029020 TCTCTCCATCGGTTCTTGTGTG 60.029 50.000 0.00 0.00 0.00 3.82
1851 1927 7.145323 AGTTTTTGACGGTTCATTATCTTTGG 58.855 34.615 0.00 0.00 0.00 3.28
1852 1928 6.642707 TTTTGACGGTTCATTATCTTTGGT 57.357 33.333 0.00 0.00 0.00 3.67
1853 1929 5.621197 TTGACGGTTCATTATCTTTGGTG 57.379 39.130 0.00 0.00 0.00 4.17
1854 1930 4.900684 TGACGGTTCATTATCTTTGGTGA 58.099 39.130 0.00 0.00 0.00 4.02
1865 1941 2.771089 TCTTTGGTGAGTGATGTCTGC 58.229 47.619 0.00 0.00 0.00 4.26
1868 1944 0.392706 TGGTGAGTGATGTCTGCGTT 59.607 50.000 0.00 0.00 0.00 4.84
1965 2051 7.147549 CCTCTCACTTCCCAGGTGTATTTTATA 60.148 40.741 0.00 0.00 36.25 0.98
1967 2053 8.210946 TCTCACTTCCCAGGTGTATTTTATATG 58.789 37.037 0.00 0.00 36.25 1.78
2068 2155 7.329226 TCTCAACTCAAGCTTTCTTTTGTTTTG 59.671 33.333 0.00 0.00 0.00 2.44
2069 2156 7.151308 TCAACTCAAGCTTTCTTTTGTTTTGA 58.849 30.769 0.00 0.00 30.80 2.69
2103 2190 4.080582 TGAAACTTTCTGTCTCTTGACCCA 60.081 41.667 3.22 0.00 42.28 4.51
2134 2221 2.821969 CCATGAACCTTTCTTGGGTCTG 59.178 50.000 11.33 0.00 46.01 3.51
2348 2442 2.481441 TGTGCAGATCCCTACCTCAAT 58.519 47.619 0.00 0.00 0.00 2.57
2422 2516 4.261781 CGGCGGCGAGGTACCTAC 62.262 72.222 29.19 10.28 0.00 3.18
2423 2517 3.909285 GGCGGCGAGGTACCTACC 61.909 72.222 16.29 18.28 46.82 3.18
2455 2549 3.194719 GCTGCTGCTTCACCATCC 58.805 61.111 8.53 0.00 36.03 3.51
2492 2586 3.997021 CTGTGCCAAACCACTCTACTAAG 59.003 47.826 0.00 0.00 36.68 2.18
2541 2690 7.053316 TGCACTAAACTGTACTAAACCACTA 57.947 36.000 0.00 0.00 0.00 2.74
2549 2698 8.877808 AACTGTACTAAACCACTACTTACAAC 57.122 34.615 0.00 0.00 0.00 3.32
2550 2699 8.010733 ACTGTACTAAACCACTACTTACAACA 57.989 34.615 0.00 0.00 0.00 3.33
2551 2700 8.139989 ACTGTACTAAACCACTACTTACAACAG 58.860 37.037 0.00 0.00 35.43 3.16
2578 2727 3.009033 TGGGGGTTCAGTCTGAAATACTG 59.991 47.826 16.86 0.00 44.66 2.74
2660 2809 1.478510 CCACCTCTGCACCTAGTACAG 59.521 57.143 0.00 0.00 0.00 2.74
2678 2827 0.541392 AGGATAATGCCACGTCAGCA 59.459 50.000 11.88 11.88 45.94 4.41
2752 2901 4.220821 TCTTCTTCCACGTTCTAGCATTCT 59.779 41.667 0.00 0.00 0.00 2.40
2765 2914 7.413438 CGTTCTAGCATTCTTACAAAATGAGCT 60.413 37.037 0.00 0.00 36.43 4.09
2793 2943 5.109500 TGGGATAATTGCAATTTTTCCCC 57.891 39.130 38.49 32.88 42.83 4.81
2816 2966 7.219322 CCCTTTTGTTCTTTCAAGGATTCAAT 58.781 34.615 0.00 0.00 38.52 2.57
2818 2968 7.172019 CCTTTTGTTCTTTCAAGGATTCAATGG 59.828 37.037 0.00 0.00 38.52 3.16
2835 2985 7.587037 TTCAATGGACCTCATTTTGATATCC 57.413 36.000 0.00 0.00 43.04 2.59
2882 3032 5.893824 GGTGGACTTGGATCTTGGAAATTAT 59.106 40.000 0.00 0.00 0.00 1.28
2964 3114 4.392921 CAGGTGATCCGGGATATATGAC 57.607 50.000 10.08 2.23 39.05 3.06
2976 3126 5.552178 GGGATATATGACCAGTCTTTGTCC 58.448 45.833 0.00 1.95 0.00 4.02
2977 3127 5.513267 GGGATATATGACCAGTCTTTGTCCC 60.513 48.000 11.33 11.33 0.00 4.46
2978 3128 5.071788 GGATATATGACCAGTCTTTGTCCCA 59.928 44.000 0.00 0.00 0.00 4.37
2982 3132 1.141053 GACCAGTCTTTGTCCCAGTGT 59.859 52.381 0.00 0.00 0.00 3.55
2983 3133 1.134098 ACCAGTCTTTGTCCCAGTGTG 60.134 52.381 0.00 0.00 0.00 3.82
3013 3164 4.762251 ACTTCAGGCTATCCAGTGAAAAAC 59.238 41.667 0.00 0.00 29.49 2.43
3014 3165 4.640771 TCAGGCTATCCAGTGAAAAACT 57.359 40.909 0.00 0.00 40.93 2.66
3225 3376 5.080969 TGTAGCTGTTGGGAGTTATGTAC 57.919 43.478 0.00 0.00 0.00 2.90
3294 3445 7.675161 TTGATATCCTCCTTACAAGACATGA 57.325 36.000 0.00 0.00 0.00 3.07
3403 3587 7.114388 GCTGTTATTAACAAAGAACGAAAAGGG 59.886 37.037 10.32 0.00 41.61 3.95
3536 3720 7.562135 ACTAAGTCTTCTTTTGTCAGGTTGTA 58.438 34.615 0.00 0.00 35.36 2.41
3575 3759 4.946784 AATACAAGACTGGATTGAACGC 57.053 40.909 1.76 0.00 34.57 4.84
3581 3765 2.031919 TGGATTGAACGCGTGGCT 59.968 55.556 14.98 0.00 0.00 4.75
3661 3845 6.376177 GTGGCACTATAGGTAAAAACAACAC 58.624 40.000 11.13 0.00 0.00 3.32
3686 3870 4.870123 AAATTACTGCAGCAAACCATCA 57.130 36.364 15.27 0.00 0.00 3.07
3747 3931 1.971695 GCCGGTTGAGGGGTCAAAG 60.972 63.158 1.90 0.00 0.00 2.77
3852 4036 1.792006 CCGCGTAGGTGAGAAAAAGT 58.208 50.000 4.92 0.00 34.51 2.66
3854 4038 2.096417 CCGCGTAGGTGAGAAAAAGTTG 60.096 50.000 4.92 0.00 34.51 3.16
3889 4073 7.913297 TCAGTGTTTTCTTTATTTCTTTGACCG 59.087 33.333 0.00 0.00 0.00 4.79
4266 4450 7.092079 TCATGCAGGATTTGTCTTGTATTTTG 58.908 34.615 0.00 0.00 0.00 2.44
4464 4649 7.834068 AACTCTGTACATTAGCAAGTATGTG 57.166 36.000 0.00 0.00 36.46 3.21
4542 4727 9.208022 TCAAATATCGTTAATCTCCATGATGTC 57.792 33.333 0.00 0.00 35.21 3.06
4682 4867 3.070734 TCAGAGAGCCCATGAAGCTATTC 59.929 47.826 9.83 10.47 41.75 1.75
4868 5053 5.409520 CAGATTCGACAAACTGAAATCTCCA 59.590 40.000 0.00 0.00 32.90 3.86
5081 5268 1.101049 CAAGTGTTCCTTGGCGTGGT 61.101 55.000 0.00 0.00 45.70 4.16
5082 5269 0.395173 AAGTGTTCCTTGGCGTGGTT 60.395 50.000 0.00 0.00 30.18 3.67
5154 5347 3.945346 ACGGCTATGTTTGGACACATTA 58.055 40.909 0.00 0.00 38.91 1.90
5158 5351 6.071616 ACGGCTATGTTTGGACACATTATTTT 60.072 34.615 0.00 0.00 38.91 1.82
5159 5352 6.811170 CGGCTATGTTTGGACACATTATTTTT 59.189 34.615 0.00 0.00 38.91 1.94
5281 5474 5.114780 GTGATCTTGAAGATTCTGCTGCTA 58.885 41.667 9.35 0.00 34.53 3.49
5295 5488 1.354040 CTGCTAAAGAGGTCAGCACG 58.646 55.000 0.00 0.00 40.26 5.34
5433 5639 6.545504 AGGTAAGCACTGCATATATTTTCG 57.454 37.500 3.30 0.00 0.00 3.46
5622 5829 5.275494 CAAATTGCAGTGATCGAATATGCA 58.725 37.500 12.21 12.21 44.58 3.96
5772 5980 2.698274 TGAGACACCTTGTGCTTACTCA 59.302 45.455 0.00 0.00 36.98 3.41
5817 6025 0.244721 GCTCCAAAACTCACATGGGC 59.755 55.000 0.00 0.00 34.89 5.36
5898 6106 9.944376 TCTGCTAAACTGTAAGAAATCTTGTAT 57.056 29.630 5.93 0.00 37.40 2.29
6044 6514 4.934602 TGTCAAAGAATGCGATGACATGTA 59.065 37.500 9.73 0.00 45.14 2.29
6045 6515 5.411053 TGTCAAAGAATGCGATGACATGTAA 59.589 36.000 9.73 0.00 45.14 2.41
6046 6516 5.961843 GTCAAAGAATGCGATGACATGTAAG 59.038 40.000 0.00 0.00 41.35 2.34
6047 6517 5.643348 TCAAAGAATGCGATGACATGTAAGT 59.357 36.000 0.00 0.00 0.00 2.24
6089 6570 6.764308 ATCCAGTTTGGTGATAGAAACATG 57.236 37.500 0.00 0.00 39.03 3.21
6166 6647 0.745845 CTTTCGTGGGCAGGGATGAG 60.746 60.000 0.00 0.00 0.00 2.90
6292 6779 6.651225 GGATACAGATTATTGAGCTACCAACC 59.349 42.308 0.00 0.00 0.00 3.77
6373 6860 5.475564 GCCATCACCACTTTTCTTAGGTAAA 59.524 40.000 0.00 0.00 32.01 2.01
6443 6932 7.148639 CGTCTCTTTCCTTTCGATGTCAATTTA 60.149 37.037 0.00 0.00 0.00 1.40
6444 6933 8.504005 GTCTCTTTCCTTTCGATGTCAATTTAA 58.496 33.333 0.00 0.00 0.00 1.52
6446 6935 8.160521 TCTTTCCTTTCGATGTCAATTTAACA 57.839 30.769 0.00 0.00 0.00 2.41
6447 6936 8.625651 TCTTTCCTTTCGATGTCAATTTAACAA 58.374 29.630 0.00 0.00 0.00 2.83
6448 6937 8.568732 TTTCCTTTCGATGTCAATTTAACAAC 57.431 30.769 0.00 0.00 0.00 3.32
6449 6938 7.504924 TCCTTTCGATGTCAATTTAACAACT 57.495 32.000 0.00 0.00 0.00 3.16
6450 6939 7.936584 TCCTTTCGATGTCAATTTAACAACTT 58.063 30.769 0.00 0.00 0.00 2.66
6594 7110 3.162154 CCCGGAGCCCCTAAGACC 61.162 72.222 0.73 0.00 0.00 3.85
6678 7194 1.153568 GCACGGCAGCAGATCAGTA 60.154 57.895 0.00 0.00 0.00 2.74
7121 7655 0.520404 GCTGCACACCTCATGTCTTG 59.480 55.000 0.00 0.00 40.64 3.02
7168 7710 6.830324 TCTGGAATGCAGTAATTTAGCAGAAT 59.170 34.615 0.85 0.00 42.14 2.40
7173 7715 7.578310 ATGCAGTAATTTAGCAGAATCACAT 57.422 32.000 0.00 0.00 42.14 3.21
7231 7782 1.325640 CAGATGTCGCAAATCGGTCTG 59.674 52.381 0.00 0.00 39.05 3.51
7363 7939 5.924475 ACTTGTTGGACGAAATCTGTTAG 57.076 39.130 0.00 0.00 0.00 2.34
7387 7965 7.508687 AGGCCTTTTGTTCATTTAATCTGTTT 58.491 30.769 0.00 0.00 0.00 2.83
7388 7966 8.646900 AGGCCTTTTGTTCATTTAATCTGTTTA 58.353 29.630 0.00 0.00 0.00 2.01
7389 7967 9.435688 GGCCTTTTGTTCATTTAATCTGTTTAT 57.564 29.630 0.00 0.00 0.00 1.40
7414 7992 2.432146 TGAGCCGCTGTGATTCTCTTAT 59.568 45.455 0.00 0.00 0.00 1.73
7493 8072 3.779183 TCAAATCCTCCTGATCTGAGCTT 59.221 43.478 0.38 0.00 27.28 3.74
7498 8077 5.066913 TCCTCCTGATCTGAGCTTATACA 57.933 43.478 0.38 0.00 0.00 2.29
7504 8083 3.963374 TGATCTGAGCTTATACACAGCCT 59.037 43.478 0.00 0.00 38.09 4.58
7525 8104 4.382470 CCTCTGTTCAGGTAATGGTCTCTG 60.382 50.000 0.00 0.00 0.00 3.35
7529 8108 6.096987 TCTGTTCAGGTAATGGTCTCTGATAC 59.903 42.308 0.00 0.00 36.34 2.24
7538 8117 6.821031 AATGGTCTCTGATACGATACTACC 57.179 41.667 0.00 0.00 0.00 3.18
7648 8228 7.171678 GCTTGATATTTCAGGTGGTATCTACAC 59.828 40.741 0.00 0.00 38.10 2.90
7659 8239 6.015010 AGGTGGTATCTACACTATTCATGAGC 60.015 42.308 0.00 0.00 38.83 4.26
7764 8344 7.133891 ACACTTGTCATACATCTAACAAAGC 57.866 36.000 0.00 0.00 31.75 3.51
7766 8346 8.094548 ACACTTGTCATACATCTAACAAAGCTA 58.905 33.333 0.00 0.00 31.75 3.32
7798 8378 2.820728 AAAAAGGAGGATTACCCCGG 57.179 50.000 0.00 0.00 36.73 5.73
7799 8379 0.257905 AAAAGGAGGATTACCCCGGC 59.742 55.000 0.00 0.00 36.73 6.13
7800 8380 1.642513 AAAGGAGGATTACCCCGGCC 61.643 60.000 0.00 0.00 36.73 6.13
7801 8381 2.447959 GGAGGATTACCCCGGCCT 60.448 66.667 0.00 0.00 36.73 5.19
7802 8382 2.517798 GGAGGATTACCCCGGCCTC 61.518 68.421 13.52 13.52 44.84 4.70
7803 8383 1.459730 GAGGATTACCCCGGCCTCT 60.460 63.158 14.36 0.00 42.81 3.69
7804 8384 1.759459 GAGGATTACCCCGGCCTCTG 61.759 65.000 14.36 0.00 42.81 3.35
7805 8385 2.111251 GATTACCCCGGCCTCTGC 59.889 66.667 0.00 0.00 0.00 4.26
7806 8386 2.690881 ATTACCCCGGCCTCTGCA 60.691 61.111 0.00 0.00 40.13 4.41
7807 8387 2.056906 GATTACCCCGGCCTCTGCAT 62.057 60.000 0.00 0.00 40.13 3.96
7808 8388 2.056906 ATTACCCCGGCCTCTGCATC 62.057 60.000 0.00 0.00 40.13 3.91
7809 8389 3.696518 TACCCCGGCCTCTGCATCT 62.697 63.158 0.00 0.00 40.13 2.90
7810 8390 2.306715 TACCCCGGCCTCTGCATCTA 62.307 60.000 0.00 0.00 40.13 1.98
7811 8391 2.739784 CCCGGCCTCTGCATCTAG 59.260 66.667 0.00 0.00 40.13 2.43
7812 8392 2.739784 CCGGCCTCTGCATCTAGG 59.260 66.667 0.00 5.70 40.13 3.02
7813 8393 2.136878 CCGGCCTCTGCATCTAGGT 61.137 63.158 0.00 0.00 40.13 3.08
7814 8394 1.068753 CGGCCTCTGCATCTAGGTG 59.931 63.158 0.00 0.00 40.13 4.00
7815 8395 1.395045 CGGCCTCTGCATCTAGGTGA 61.395 60.000 7.33 0.00 40.13 4.02
7816 8396 1.055040 GGCCTCTGCATCTAGGTGAT 58.945 55.000 7.33 0.00 40.13 3.06
7825 8405 1.535896 CATCTAGGTGATGCATGCAGC 59.464 52.381 28.44 28.44 44.96 5.25
7826 8406 0.179037 TCTAGGTGATGCATGCAGCC 60.179 55.000 31.30 26.73 44.83 4.85
7827 8407 0.464916 CTAGGTGATGCATGCAGCCA 60.465 55.000 31.30 24.21 44.83 4.75
7828 8408 0.184211 TAGGTGATGCATGCAGCCAT 59.816 50.000 31.30 21.83 44.83 4.40
7829 8409 0.686441 AGGTGATGCATGCAGCCATT 60.686 50.000 31.30 12.25 44.83 3.16
7830 8410 0.177141 GGTGATGCATGCAGCCATTT 59.823 50.000 31.30 11.44 44.83 2.32
7831 8411 1.406341 GGTGATGCATGCAGCCATTTT 60.406 47.619 31.30 10.63 44.83 1.82
7832 8412 2.159071 GGTGATGCATGCAGCCATTTTA 60.159 45.455 31.30 10.43 44.83 1.52
7833 8413 3.493699 GGTGATGCATGCAGCCATTTTAT 60.494 43.478 31.30 9.02 44.83 1.40
7834 8414 4.124238 GTGATGCATGCAGCCATTTTATT 58.876 39.130 31.30 8.21 44.83 1.40
7835 8415 5.291178 GTGATGCATGCAGCCATTTTATTA 58.709 37.500 31.30 8.11 44.83 0.98
7836 8416 5.754406 GTGATGCATGCAGCCATTTTATTAA 59.246 36.000 31.30 7.33 44.83 1.40
7837 8417 6.425721 GTGATGCATGCAGCCATTTTATTAAT 59.574 34.615 31.30 6.94 44.83 1.40
7838 8418 6.993308 TGATGCATGCAGCCATTTTATTAATT 59.007 30.769 31.30 6.23 44.83 1.40
7839 8419 8.148999 TGATGCATGCAGCCATTTTATTAATTA 58.851 29.630 31.30 6.12 44.83 1.40
7840 8420 9.158233 GATGCATGCAGCCATTTTATTAATTAT 57.842 29.630 25.21 0.54 44.83 1.28
7841 8421 8.905660 TGCATGCAGCCATTTTATTAATTATT 57.094 26.923 18.46 0.00 44.83 1.40
7842 8422 9.339850 TGCATGCAGCCATTTTATTAATTATTT 57.660 25.926 18.46 0.00 44.83 1.40
7843 8423 9.815936 GCATGCAGCCATTTTATTAATTATTTC 57.184 29.630 14.21 0.00 37.23 2.17
7846 8426 9.881649 TGCAGCCATTTTATTAATTATTTCACA 57.118 25.926 0.00 0.00 0.00 3.58
7876 8456 9.933240 ACCTTATAAAGTAGTACATCAGGTAGT 57.067 33.333 2.52 0.00 39.06 2.73
7887 8467 3.842869 CAGGTAGTCTGAAGCCACC 57.157 57.895 0.00 0.00 46.18 4.61
7888 8468 0.976641 CAGGTAGTCTGAAGCCACCA 59.023 55.000 0.00 0.00 46.18 4.17
7889 8469 1.556911 CAGGTAGTCTGAAGCCACCAT 59.443 52.381 0.00 0.00 46.18 3.55
7890 8470 1.834263 AGGTAGTCTGAAGCCACCATC 59.166 52.381 0.00 0.00 0.00 3.51
7891 8471 1.834263 GGTAGTCTGAAGCCACCATCT 59.166 52.381 0.00 0.00 0.00 2.90
7892 8472 2.237392 GGTAGTCTGAAGCCACCATCTT 59.763 50.000 0.00 0.00 0.00 2.40
7893 8473 3.451178 GGTAGTCTGAAGCCACCATCTTA 59.549 47.826 0.00 0.00 0.00 2.10
7894 8474 3.902881 AGTCTGAAGCCACCATCTTAG 57.097 47.619 0.00 0.00 0.00 2.18
7895 8475 2.093235 AGTCTGAAGCCACCATCTTAGC 60.093 50.000 0.00 0.00 0.00 3.09
7896 8476 1.908619 TCTGAAGCCACCATCTTAGCA 59.091 47.619 0.00 0.00 0.00 3.49
7897 8477 2.305635 TCTGAAGCCACCATCTTAGCAA 59.694 45.455 0.00 0.00 0.00 3.91
7898 8478 2.421424 CTGAAGCCACCATCTTAGCAAC 59.579 50.000 0.00 0.00 0.00 4.17
7899 8479 2.224744 TGAAGCCACCATCTTAGCAACA 60.225 45.455 0.00 0.00 0.00 3.33
7900 8480 2.814805 AGCCACCATCTTAGCAACAT 57.185 45.000 0.00 0.00 0.00 2.71
7901 8481 2.648059 AGCCACCATCTTAGCAACATC 58.352 47.619 0.00 0.00 0.00 3.06
7902 8482 2.240667 AGCCACCATCTTAGCAACATCT 59.759 45.455 0.00 0.00 0.00 2.90
7903 8483 2.357009 GCCACCATCTTAGCAACATCTG 59.643 50.000 0.00 0.00 0.00 2.90
7904 8484 3.614092 CCACCATCTTAGCAACATCTGT 58.386 45.455 0.00 0.00 0.00 3.41
7905 8485 3.624861 CCACCATCTTAGCAACATCTGTC 59.375 47.826 0.00 0.00 0.00 3.51
7906 8486 3.308053 CACCATCTTAGCAACATCTGTCG 59.692 47.826 0.00 0.00 0.00 4.35
7907 8487 3.055819 ACCATCTTAGCAACATCTGTCGT 60.056 43.478 0.00 0.00 0.00 4.34
7908 8488 3.935203 CCATCTTAGCAACATCTGTCGTT 59.065 43.478 0.00 0.00 0.00 3.85
7909 8489 5.109210 CCATCTTAGCAACATCTGTCGTTA 58.891 41.667 0.00 0.00 0.00 3.18
7910 8490 5.005779 CCATCTTAGCAACATCTGTCGTTAC 59.994 44.000 0.00 0.00 0.00 2.50
7911 8491 5.386958 TCTTAGCAACATCTGTCGTTACT 57.613 39.130 0.00 0.00 0.00 2.24
7912 8492 5.779922 TCTTAGCAACATCTGTCGTTACTT 58.220 37.500 0.00 0.00 0.00 2.24
7913 8493 5.862323 TCTTAGCAACATCTGTCGTTACTTC 59.138 40.000 0.00 0.00 0.00 3.01
7914 8494 4.258702 AGCAACATCTGTCGTTACTTCT 57.741 40.909 0.00 0.00 0.00 2.85
7915 8495 5.386958 AGCAACATCTGTCGTTACTTCTA 57.613 39.130 0.00 0.00 0.00 2.10
7916 8496 5.967088 AGCAACATCTGTCGTTACTTCTAT 58.033 37.500 0.00 0.00 0.00 1.98
7917 8497 6.037098 AGCAACATCTGTCGTTACTTCTATC 58.963 40.000 0.00 0.00 0.00 2.08
7918 8498 5.232414 GCAACATCTGTCGTTACTTCTATCC 59.768 44.000 0.00 0.00 0.00 2.59
7919 8499 6.330278 CAACATCTGTCGTTACTTCTATCCA 58.670 40.000 0.00 0.00 0.00 3.41
7920 8500 5.892568 ACATCTGTCGTTACTTCTATCCAC 58.107 41.667 0.00 0.00 0.00 4.02
7921 8501 5.652891 ACATCTGTCGTTACTTCTATCCACT 59.347 40.000 0.00 0.00 0.00 4.00
7922 8502 6.153000 ACATCTGTCGTTACTTCTATCCACTT 59.847 38.462 0.00 0.00 0.00 3.16
7923 8503 5.950883 TCTGTCGTTACTTCTATCCACTTG 58.049 41.667 0.00 0.00 0.00 3.16
7924 8504 5.708697 TCTGTCGTTACTTCTATCCACTTGA 59.291 40.000 0.00 0.00 0.00 3.02
7925 8505 6.377429 TCTGTCGTTACTTCTATCCACTTGAT 59.623 38.462 0.00 0.00 37.49 2.57
7926 8506 6.330278 TGTCGTTACTTCTATCCACTTGATG 58.670 40.000 0.00 0.00 34.76 3.07
7927 8507 6.152154 TGTCGTTACTTCTATCCACTTGATGA 59.848 38.462 0.00 0.00 34.76 2.92
7928 8508 7.033791 GTCGTTACTTCTATCCACTTGATGAA 58.966 38.462 0.00 0.00 34.76 2.57
7929 8509 7.221067 GTCGTTACTTCTATCCACTTGATGAAG 59.779 40.741 0.00 0.00 40.55 3.02
7930 8510 6.477033 CGTTACTTCTATCCACTTGATGAAGG 59.523 42.308 0.00 0.00 39.87 3.46
7931 8511 7.331791 GTTACTTCTATCCACTTGATGAAGGT 58.668 38.462 0.00 0.00 39.87 3.50
7932 8512 5.738909 ACTTCTATCCACTTGATGAAGGTG 58.261 41.667 0.00 0.00 39.87 4.00
7933 8513 5.249393 ACTTCTATCCACTTGATGAAGGTGT 59.751 40.000 0.00 0.00 39.87 4.16
7934 8514 5.089970 TCTATCCACTTGATGAAGGTGTG 57.910 43.478 0.00 0.00 34.76 3.82
7935 8515 1.896220 TCCACTTGATGAAGGTGTGC 58.104 50.000 0.00 0.00 32.95 4.57
7936 8516 0.883833 CCACTTGATGAAGGTGTGCC 59.116 55.000 0.00 0.00 32.95 5.01
7937 8517 0.518636 CACTTGATGAAGGTGTGCCG 59.481 55.000 0.00 0.00 40.50 5.69
7938 8518 0.396435 ACTTGATGAAGGTGTGCCGA 59.604 50.000 0.00 0.00 40.50 5.54
7939 8519 1.003580 ACTTGATGAAGGTGTGCCGAT 59.996 47.619 0.00 0.00 40.50 4.18
7940 8520 2.236146 ACTTGATGAAGGTGTGCCGATA 59.764 45.455 0.00 0.00 40.50 2.92
7941 8521 2.602257 TGATGAAGGTGTGCCGATAG 57.398 50.000 0.00 0.00 40.50 2.08
7942 8522 1.831106 TGATGAAGGTGTGCCGATAGT 59.169 47.619 0.00 0.00 40.50 2.12
7943 8523 2.159099 TGATGAAGGTGTGCCGATAGTC 60.159 50.000 0.00 0.00 40.50 2.59
7944 8524 0.535335 TGAAGGTGTGCCGATAGTCC 59.465 55.000 0.00 0.00 40.50 3.85
7945 8525 0.535335 GAAGGTGTGCCGATAGTCCA 59.465 55.000 0.00 0.00 40.50 4.02
7946 8526 0.981183 AAGGTGTGCCGATAGTCCAA 59.019 50.000 0.00 0.00 40.50 3.53
7947 8527 0.981183 AGGTGTGCCGATAGTCCAAA 59.019 50.000 0.00 0.00 40.50 3.28
7948 8528 1.084289 GGTGTGCCGATAGTCCAAAC 58.916 55.000 0.00 0.00 0.00 2.93
7949 8529 1.084289 GTGTGCCGATAGTCCAAACC 58.916 55.000 0.00 0.00 0.00 3.27
7950 8530 0.981183 TGTGCCGATAGTCCAAACCT 59.019 50.000 0.00 0.00 0.00 3.50
7951 8531 2.093869 GTGTGCCGATAGTCCAAACCTA 60.094 50.000 0.00 0.00 0.00 3.08
7952 8532 2.568062 TGTGCCGATAGTCCAAACCTAA 59.432 45.455 0.00 0.00 0.00 2.69
7953 8533 3.199071 TGTGCCGATAGTCCAAACCTAAT 59.801 43.478 0.00 0.00 0.00 1.73
7954 8534 4.406326 TGTGCCGATAGTCCAAACCTAATA 59.594 41.667 0.00 0.00 0.00 0.98
7955 8535 4.748600 GTGCCGATAGTCCAAACCTAATAC 59.251 45.833 0.00 0.00 0.00 1.89
7956 8536 4.202284 TGCCGATAGTCCAAACCTAATACC 60.202 45.833 0.00 0.00 0.00 2.73
7957 8537 4.202284 GCCGATAGTCCAAACCTAATACCA 60.202 45.833 0.00 0.00 0.00 3.25
7958 8538 5.685599 GCCGATAGTCCAAACCTAATACCAA 60.686 44.000 0.00 0.00 0.00 3.67
7959 8539 6.350906 CCGATAGTCCAAACCTAATACCAAA 58.649 40.000 0.00 0.00 0.00 3.28
7960 8540 6.259387 CCGATAGTCCAAACCTAATACCAAAC 59.741 42.308 0.00 0.00 0.00 2.93
7961 8541 6.019318 CGATAGTCCAAACCTAATACCAAACG 60.019 42.308 0.00 0.00 0.00 3.60
7962 8542 4.329392 AGTCCAAACCTAATACCAAACGG 58.671 43.478 0.00 0.00 0.00 4.44
7963 8543 4.041938 AGTCCAAACCTAATACCAAACGGA 59.958 41.667 0.00 0.00 0.00 4.69
7964 8544 4.154737 GTCCAAACCTAATACCAAACGGAC 59.845 45.833 0.00 0.00 33.12 4.79
7965 8545 4.073549 CCAAACCTAATACCAAACGGACA 58.926 43.478 0.00 0.00 0.00 4.02
7966 8546 4.703093 CCAAACCTAATACCAAACGGACAT 59.297 41.667 0.00 0.00 0.00 3.06
7967 8547 5.163693 CCAAACCTAATACCAAACGGACATC 60.164 44.000 0.00 0.00 0.00 3.06
7968 8548 4.829872 ACCTAATACCAAACGGACATCA 57.170 40.909 0.00 0.00 0.00 3.07
7969 8549 4.510571 ACCTAATACCAAACGGACATCAC 58.489 43.478 0.00 0.00 0.00 3.06
7970 8550 4.020039 ACCTAATACCAAACGGACATCACA 60.020 41.667 0.00 0.00 0.00 3.58
7971 8551 4.331717 CCTAATACCAAACGGACATCACAC 59.668 45.833 0.00 0.00 0.00 3.82
7972 8552 2.172851 TACCAAACGGACATCACACC 57.827 50.000 0.00 0.00 0.00 4.16
7973 8553 0.181587 ACCAAACGGACATCACACCA 59.818 50.000 0.00 0.00 0.00 4.17
7974 8554 1.313772 CCAAACGGACATCACACCAA 58.686 50.000 0.00 0.00 0.00 3.67
7975 8555 1.678627 CCAAACGGACATCACACCAAA 59.321 47.619 0.00 0.00 0.00 3.28
7976 8556 2.287547 CCAAACGGACATCACACCAAAG 60.288 50.000 0.00 0.00 0.00 2.77
7977 8557 0.951558 AACGGACATCACACCAAAGC 59.048 50.000 0.00 0.00 0.00 3.51
7978 8558 0.889186 ACGGACATCACACCAAAGCC 60.889 55.000 0.00 0.00 0.00 4.35
7979 8559 0.606401 CGGACATCACACCAAAGCCT 60.606 55.000 0.00 0.00 0.00 4.58
7980 8560 1.338674 CGGACATCACACCAAAGCCTA 60.339 52.381 0.00 0.00 0.00 3.93
7981 8561 2.790433 GGACATCACACCAAAGCCTAA 58.210 47.619 0.00 0.00 0.00 2.69
7982 8562 2.488153 GGACATCACACCAAAGCCTAAC 59.512 50.000 0.00 0.00 0.00 2.34
7983 8563 3.146066 GACATCACACCAAAGCCTAACA 58.854 45.455 0.00 0.00 0.00 2.41
7984 8564 3.758554 GACATCACACCAAAGCCTAACAT 59.241 43.478 0.00 0.00 0.00 2.71
7985 8565 3.758554 ACATCACACCAAAGCCTAACATC 59.241 43.478 0.00 0.00 0.00 3.06
7986 8566 3.788227 TCACACCAAAGCCTAACATCT 57.212 42.857 0.00 0.00 0.00 2.90
7987 8567 4.901197 TCACACCAAAGCCTAACATCTA 57.099 40.909 0.00 0.00 0.00 1.98
7988 8568 5.235850 TCACACCAAAGCCTAACATCTAA 57.764 39.130 0.00 0.00 0.00 2.10
7989 8569 5.626142 TCACACCAAAGCCTAACATCTAAA 58.374 37.500 0.00 0.00 0.00 1.85
7990 8570 5.705441 TCACACCAAAGCCTAACATCTAAAG 59.295 40.000 0.00 0.00 0.00 1.85
7991 8571 4.459337 ACACCAAAGCCTAACATCTAAAGC 59.541 41.667 0.00 0.00 0.00 3.51
7992 8572 4.017126 ACCAAAGCCTAACATCTAAAGCC 58.983 43.478 0.00 0.00 0.00 4.35
7993 8573 4.016444 CCAAAGCCTAACATCTAAAGCCA 58.984 43.478 0.00 0.00 0.00 4.75
7994 8574 4.096984 CCAAAGCCTAACATCTAAAGCCAG 59.903 45.833 0.00 0.00 0.00 4.85
7995 8575 4.844349 AAGCCTAACATCTAAAGCCAGA 57.156 40.909 0.00 0.00 0.00 3.86
7996 8576 4.414337 AGCCTAACATCTAAAGCCAGAG 57.586 45.455 0.00 0.00 0.00 3.35
7997 8577 2.875317 GCCTAACATCTAAAGCCAGAGC 59.125 50.000 0.00 0.00 40.32 4.09
7998 8578 3.471680 CCTAACATCTAAAGCCAGAGCC 58.528 50.000 0.00 0.00 41.25 4.70
7999 8579 2.426842 AACATCTAAAGCCAGAGCCC 57.573 50.000 0.00 0.00 41.25 5.19
8000 8580 0.548510 ACATCTAAAGCCAGAGCCCC 59.451 55.000 0.00 0.00 41.25 5.80
8001 8581 0.179006 CATCTAAAGCCAGAGCCCCC 60.179 60.000 0.00 0.00 41.25 5.40
8002 8582 0.624500 ATCTAAAGCCAGAGCCCCCA 60.625 55.000 0.00 0.00 41.25 4.96
8003 8583 0.844661 TCTAAAGCCAGAGCCCCCAA 60.845 55.000 0.00 0.00 41.25 4.12
8004 8584 0.681243 CTAAAGCCAGAGCCCCCAAC 60.681 60.000 0.00 0.00 41.25 3.77
8005 8585 2.150014 TAAAGCCAGAGCCCCCAACC 62.150 60.000 0.00 0.00 41.25 3.77
8007 8587 4.299796 GCCAGAGCCCCCAACCAA 62.300 66.667 0.00 0.00 0.00 3.67
8008 8588 2.036256 CCAGAGCCCCCAACCAAG 59.964 66.667 0.00 0.00 0.00 3.61
8009 8589 2.677875 CAGAGCCCCCAACCAAGC 60.678 66.667 0.00 0.00 0.00 4.01
8010 8590 3.984732 AGAGCCCCCAACCAAGCC 61.985 66.667 0.00 0.00 0.00 4.35
8011 8591 4.299796 GAGCCCCCAACCAAGCCA 62.300 66.667 0.00 0.00 0.00 4.75
8012 8592 4.621087 AGCCCCCAACCAAGCCAC 62.621 66.667 0.00 0.00 0.00 5.01
8013 8593 4.932105 GCCCCCAACCAAGCCACA 62.932 66.667 0.00 0.00 0.00 4.17
8014 8594 2.120274 CCCCCAACCAAGCCACAT 59.880 61.111 0.00 0.00 0.00 3.21
8015 8595 1.386155 CCCCCAACCAAGCCACATA 59.614 57.895 0.00 0.00 0.00 2.29
8016 8596 0.970427 CCCCCAACCAAGCCACATAC 60.970 60.000 0.00 0.00 0.00 2.39
8017 8597 0.970427 CCCCAACCAAGCCACATACC 60.970 60.000 0.00 0.00 0.00 2.73
8018 8598 1.312371 CCCAACCAAGCCACATACCG 61.312 60.000 0.00 0.00 0.00 4.02
8019 8599 1.312371 CCAACCAAGCCACATACCGG 61.312 60.000 0.00 0.00 0.00 5.28
8020 8600 1.001393 AACCAAGCCACATACCGGG 60.001 57.895 6.32 0.00 0.00 5.73
8021 8601 1.785353 AACCAAGCCACATACCGGGT 61.785 55.000 6.32 4.46 35.20 5.28
8022 8602 1.001393 CCAAGCCACATACCGGGTT 60.001 57.895 4.31 0.00 44.92 4.11
8023 8603 0.610785 CCAAGCCACATACCGGGTTT 60.611 55.000 4.31 0.00 42.22 3.27
8024 8604 0.525761 CAAGCCACATACCGGGTTTG 59.474 55.000 14.97 14.97 42.22 2.93
8025 8605 0.610785 AAGCCACATACCGGGTTTGG 60.611 55.000 19.61 17.02 41.37 3.28
8026 8606 2.049767 GCCACATACCGGGTTTGGG 61.050 63.158 19.61 16.20 0.00 4.12
8027 8607 1.379309 CCACATACCGGGTTTGGGG 60.379 63.158 22.05 22.05 32.35 4.96
8028 8608 2.049767 CACATACCGGGTTTGGGGC 61.050 63.158 19.61 0.00 0.00 5.80
8029 8609 2.826738 CATACCGGGTTTGGGGCG 60.827 66.667 4.31 0.00 0.00 6.13
8030 8610 4.807631 ATACCGGGTTTGGGGCGC 62.808 66.667 4.31 0.00 0.00 6.53
8051 8631 4.477975 CCGGTCCGACGCACTCTC 62.478 72.222 14.39 0.00 0.00 3.20
8052 8632 3.733960 CGGTCCGACGCACTCTCA 61.734 66.667 4.91 0.00 0.00 3.27
8053 8633 2.885861 GGTCCGACGCACTCTCAT 59.114 61.111 0.00 0.00 0.00 2.90
8054 8634 1.517257 GGTCCGACGCACTCTCATG 60.517 63.158 0.00 0.00 0.00 3.07
8055 8635 1.213013 GTCCGACGCACTCTCATGT 59.787 57.895 0.00 0.00 0.00 3.21
8056 8636 1.073216 GTCCGACGCACTCTCATGTG 61.073 60.000 0.00 0.00 40.62 3.21
8057 8637 1.080501 CCGACGCACTCTCATGTGT 60.081 57.895 0.00 0.00 45.84 3.72
8059 8639 2.353807 GACGCACTCTCATGTGTCG 58.646 57.895 3.92 0.00 46.77 4.35
8060 8640 0.387367 GACGCACTCTCATGTGTCGT 60.387 55.000 13.43 13.43 46.77 4.34
8061 8641 0.387367 ACGCACTCTCATGTGTCGTC 60.387 55.000 9.77 0.00 42.25 4.20
8062 8642 1.398762 CGCACTCTCATGTGTCGTCG 61.399 60.000 0.00 0.00 39.89 5.12
8063 8643 1.678269 GCACTCTCATGTGTCGTCGC 61.678 60.000 0.00 0.00 39.89 5.19
8064 8644 1.073216 CACTCTCATGTGTCGTCGCC 61.073 60.000 0.00 0.00 33.61 5.54
8065 8645 1.869574 CTCTCATGTGTCGTCGCCG 60.870 63.158 0.00 0.00 0.00 6.46
8066 8646 3.545481 CTCATGTGTCGTCGCCGC 61.545 66.667 0.00 0.00 0.00 6.53
8069 8649 4.451150 ATGTGTCGTCGCCGCCAT 62.451 61.111 0.00 0.00 0.00 4.40
8071 8651 4.796231 GTGTCGTCGCCGCCATCT 62.796 66.667 0.00 0.00 0.00 2.90
8072 8652 4.063967 TGTCGTCGCCGCCATCTT 62.064 61.111 0.00 0.00 0.00 2.40
8073 8653 3.255379 GTCGTCGCCGCCATCTTC 61.255 66.667 0.00 0.00 0.00 2.87
8074 8654 4.508128 TCGTCGCCGCCATCTTCC 62.508 66.667 0.00 0.00 0.00 3.46
8075 8655 4.812476 CGTCGCCGCCATCTTCCA 62.812 66.667 0.00 0.00 0.00 3.53
8076 8656 3.195698 GTCGCCGCCATCTTCCAC 61.196 66.667 0.00 0.00 0.00 4.02
8077 8657 3.390521 TCGCCGCCATCTTCCACT 61.391 61.111 0.00 0.00 0.00 4.00
8078 8658 3.197790 CGCCGCCATCTTCCACTG 61.198 66.667 0.00 0.00 0.00 3.66
8079 8659 2.268920 GCCGCCATCTTCCACTGA 59.731 61.111 0.00 0.00 0.00 3.41
8080 8660 1.153086 GCCGCCATCTTCCACTGAT 60.153 57.895 0.00 0.00 0.00 2.90
8081 8661 1.162800 GCCGCCATCTTCCACTGATC 61.163 60.000 0.00 0.00 0.00 2.92
8082 8662 0.178767 CCGCCATCTTCCACTGATCA 59.821 55.000 0.00 0.00 0.00 2.92
8083 8663 1.407299 CCGCCATCTTCCACTGATCAA 60.407 52.381 0.00 0.00 0.00 2.57
8084 8664 2.569059 CGCCATCTTCCACTGATCAAT 58.431 47.619 0.00 0.00 0.00 2.57
8085 8665 2.947652 CGCCATCTTCCACTGATCAATT 59.052 45.455 0.00 0.00 0.00 2.32
8086 8666 3.379372 CGCCATCTTCCACTGATCAATTT 59.621 43.478 0.00 0.00 0.00 1.82
8087 8667 4.497006 CGCCATCTTCCACTGATCAATTTC 60.497 45.833 0.00 0.00 0.00 2.17
8088 8668 4.202090 GCCATCTTCCACTGATCAATTTCC 60.202 45.833 0.00 0.00 0.00 3.13
8089 8669 4.951715 CCATCTTCCACTGATCAATTTCCA 59.048 41.667 0.00 0.00 0.00 3.53
8090 8670 5.067413 CCATCTTCCACTGATCAATTTCCAG 59.933 44.000 0.00 0.00 0.00 3.86
8091 8671 5.503634 TCTTCCACTGATCAATTTCCAGA 57.496 39.130 0.00 0.00 0.00 3.86
8092 8672 5.494724 TCTTCCACTGATCAATTTCCAGAG 58.505 41.667 0.00 0.00 0.00 3.35
8093 8673 3.614092 TCCACTGATCAATTTCCAGAGC 58.386 45.455 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.422597 TGGACAAGTGCGTAAGGATTG 58.577 47.619 0.00 0.00 42.42 2.67
1 2 2.812011 GTTGGACAAGTGCGTAAGGATT 59.188 45.455 0.00 0.00 42.42 3.01
2 3 2.423577 GTTGGACAAGTGCGTAAGGAT 58.576 47.619 0.00 0.00 42.42 3.24
3 4 1.541670 GGTTGGACAAGTGCGTAAGGA 60.542 52.381 0.00 0.00 38.28 3.36
4 5 0.872388 GGTTGGACAAGTGCGTAAGG 59.128 55.000 0.00 0.00 38.28 2.69
5 6 1.878953 AGGTTGGACAAGTGCGTAAG 58.121 50.000 0.00 0.00 43.44 2.34
6 7 2.335316 AAGGTTGGACAAGTGCGTAA 57.665 45.000 0.00 0.00 0.00 3.18
7 8 1.944024 CAAAGGTTGGACAAGTGCGTA 59.056 47.619 0.00 0.00 0.00 4.42
8 9 0.738389 CAAAGGTTGGACAAGTGCGT 59.262 50.000 0.00 0.00 0.00 5.24
9 10 1.002468 CTCAAAGGTTGGACAAGTGCG 60.002 52.381 0.00 0.00 0.00 5.34
10 11 1.269257 GCTCAAAGGTTGGACAAGTGC 60.269 52.381 0.00 0.00 0.00 4.40
11 12 2.023673 TGCTCAAAGGTTGGACAAGTG 58.976 47.619 0.00 0.00 0.00 3.16
12 13 2.435372 TGCTCAAAGGTTGGACAAGT 57.565 45.000 0.00 0.00 0.00 3.16
13 14 4.326504 AATTGCTCAAAGGTTGGACAAG 57.673 40.909 0.00 0.00 32.31 3.16
14 15 4.081198 ACAAATTGCTCAAAGGTTGGACAA 60.081 37.500 0.00 0.00 32.96 3.18
15 16 3.450457 ACAAATTGCTCAAAGGTTGGACA 59.550 39.130 0.00 0.00 0.00 4.02
16 17 3.803778 CACAAATTGCTCAAAGGTTGGAC 59.196 43.478 0.00 0.00 0.00 4.02
17 18 4.057406 CACAAATTGCTCAAAGGTTGGA 57.943 40.909 0.00 0.00 0.00 3.53
30 31 2.430582 CGGGCCACGCACAAATTG 60.431 61.111 4.39 0.00 34.82 2.32
40 41 1.671556 CCATTTTAGCAAACGGGCCAC 60.672 52.381 4.39 0.00 0.00 5.01
41 42 0.605589 CCATTTTAGCAAACGGGCCA 59.394 50.000 4.39 0.00 0.00 5.36
42 43 0.108377 CCCATTTTAGCAAACGGGCC 60.108 55.000 0.00 0.00 0.00 5.80
43 44 0.108377 CCCCATTTTAGCAAACGGGC 60.108 55.000 0.00 0.00 33.75 6.13
44 45 0.534873 CCCCCATTTTAGCAAACGGG 59.465 55.000 0.00 0.00 35.66 5.28
45 46 0.108377 GCCCCCATTTTAGCAAACGG 60.108 55.000 0.00 0.00 0.00 4.44
46 47 0.894835 AGCCCCCATTTTAGCAAACG 59.105 50.000 0.00 0.00 0.00 3.60
47 48 1.135112 CGAGCCCCCATTTTAGCAAAC 60.135 52.381 0.00 0.00 0.00 2.93
48 49 1.181786 CGAGCCCCCATTTTAGCAAA 58.818 50.000 0.00 0.00 0.00 3.68
49 50 0.329931 TCGAGCCCCCATTTTAGCAA 59.670 50.000 0.00 0.00 0.00 3.91
50 51 0.393808 GTCGAGCCCCCATTTTAGCA 60.394 55.000 0.00 0.00 0.00 3.49
51 52 0.107165 AGTCGAGCCCCCATTTTAGC 60.107 55.000 0.00 0.00 0.00 3.09
52 53 1.209504 TGAGTCGAGCCCCCATTTTAG 59.790 52.381 0.00 0.00 0.00 1.85
53 54 1.065709 GTGAGTCGAGCCCCCATTTTA 60.066 52.381 0.00 0.00 0.00 1.52
54 55 0.322546 GTGAGTCGAGCCCCCATTTT 60.323 55.000 0.00 0.00 0.00 1.82
55 56 1.299976 GTGAGTCGAGCCCCCATTT 59.700 57.895 0.00 0.00 0.00 2.32
56 57 2.670148 GGTGAGTCGAGCCCCCATT 61.670 63.158 0.00 0.00 0.00 3.16
57 58 3.083997 GGTGAGTCGAGCCCCCAT 61.084 66.667 0.00 0.00 0.00 4.00
69 70 4.404654 GCAAAAGCCGCGGGTGAG 62.405 66.667 33.14 23.41 0.00 3.51
96 99 7.360017 GGGAATTTTAGTTCAATTTTTCTGCCG 60.360 37.037 0.00 0.00 0.00 5.69
102 105 5.107259 GCGCGGGAATTTTAGTTCAATTTTT 60.107 36.000 8.83 0.00 0.00 1.94
115 118 1.669760 TTCGAGTGCGCGGGAATTT 60.670 52.632 8.83 0.00 37.46 1.82
125 128 1.359848 ATGTTGATCGGTTCGAGTGC 58.640 50.000 0.00 0.00 39.91 4.40
140 143 8.850156 GTGGCTTGATTATTTGGATACTATGTT 58.150 33.333 0.00 0.00 37.61 2.71
145 148 9.289782 GATTAGTGGCTTGATTATTTGGATACT 57.710 33.333 0.00 0.00 37.61 2.12
146 149 9.066892 TGATTAGTGGCTTGATTATTTGGATAC 57.933 33.333 0.00 0.00 0.00 2.24
147 150 9.639563 TTGATTAGTGGCTTGATTATTTGGATA 57.360 29.630 0.00 0.00 0.00 2.59
148 151 8.537728 TTGATTAGTGGCTTGATTATTTGGAT 57.462 30.769 0.00 0.00 0.00 3.41
149 152 7.953005 TTGATTAGTGGCTTGATTATTTGGA 57.047 32.000 0.00 0.00 0.00 3.53
151 156 8.131100 ACGATTGATTAGTGGCTTGATTATTTG 58.869 33.333 0.00 0.00 0.00 2.32
153 158 7.498900 TCACGATTGATTAGTGGCTTGATTATT 59.501 33.333 0.00 0.00 36.60 1.40
193 198 3.567797 GATCTCACCTTGCCGCGC 61.568 66.667 0.00 0.00 0.00 6.86
194 199 1.298157 TTTGATCTCACCTTGCCGCG 61.298 55.000 0.00 0.00 0.00 6.46
195 200 0.881118 TTTTGATCTCACCTTGCCGC 59.119 50.000 0.00 0.00 0.00 6.53
309 323 3.948473 TGTTTCTGTCAAAATCCAACGGA 59.052 39.130 0.00 0.00 35.55 4.69
393 413 4.822350 TCTCTCTCTCTCTCTCTCTACTCG 59.178 50.000 0.00 0.00 0.00 4.18
942 963 2.768769 GGAGGTAGGGAGGCCACC 60.769 72.222 11.39 11.39 0.00 4.61
950 971 1.718280 AATAGAAGCGGGAGGTAGGG 58.282 55.000 0.00 0.00 41.46 3.53
1007 1029 3.028130 GGTGAGGTTTTTGGTTTGGAGA 58.972 45.455 0.00 0.00 0.00 3.71
1008 1030 3.031013 AGGTGAGGTTTTTGGTTTGGAG 58.969 45.455 0.00 0.00 0.00 3.86
1048 1070 4.472310 AATGGGGGAGGGAGGGGG 62.472 72.222 0.00 0.00 0.00 5.40
1050 1072 1.772156 GAGAATGGGGGAGGGAGGG 60.772 68.421 0.00 0.00 0.00 4.30
1051 1073 1.772156 GGAGAATGGGGGAGGGAGG 60.772 68.421 0.00 0.00 0.00 4.30
1052 1074 2.143419 CGGAGAATGGGGGAGGGAG 61.143 68.421 0.00 0.00 0.00 4.30
1053 1075 2.040884 CGGAGAATGGGGGAGGGA 60.041 66.667 0.00 0.00 0.00 4.20
1072 1094 0.113190 CTTCTTGCCTTCTTGGGGGT 59.887 55.000 0.00 0.00 36.00 4.95
1080 1102 2.694760 CCGCTGCCTTCTTGCCTTC 61.695 63.158 0.00 0.00 0.00 3.46
1081 1103 2.674380 CCGCTGCCTTCTTGCCTT 60.674 61.111 0.00 0.00 0.00 4.35
1084 1106 4.112341 CTGCCGCTGCCTTCTTGC 62.112 66.667 0.00 0.00 36.33 4.01
1085 1107 4.112341 GCTGCCGCTGCCTTCTTG 62.112 66.667 10.97 0.00 36.33 3.02
1086 1108 4.648626 TGCTGCCGCTGCCTTCTT 62.649 61.111 18.38 0.00 36.33 2.52
1119 1141 4.996434 ACTCACCGCACTGGCAGC 62.996 66.667 15.89 0.62 43.94 5.25
1120 1142 3.046087 CACTCACCGCACTGGCAG 61.046 66.667 14.16 14.16 43.94 4.85
1145 1167 2.480853 TACTTCATGTCCACGCGCGT 62.481 55.000 32.73 32.73 0.00 6.01
1146 1168 1.145759 ATACTTCATGTCCACGCGCG 61.146 55.000 30.96 30.96 0.00 6.86
1147 1169 0.301687 CATACTTCATGTCCACGCGC 59.698 55.000 5.73 0.00 0.00 6.86
1148 1170 1.324435 CACATACTTCATGTCCACGCG 59.676 52.381 3.53 3.53 44.99 6.01
1334 1375 5.610398 GGGCAAAAGAAAGAAAGAAATGGA 58.390 37.500 0.00 0.00 0.00 3.41
1338 1379 4.158764 TGACGGGCAAAAGAAAGAAAGAAA 59.841 37.500 0.00 0.00 0.00 2.52
1339 1380 3.697045 TGACGGGCAAAAGAAAGAAAGAA 59.303 39.130 0.00 0.00 0.00 2.52
1340 1381 3.283751 TGACGGGCAAAAGAAAGAAAGA 58.716 40.909 0.00 0.00 0.00 2.52
1341 1382 3.708563 TGACGGGCAAAAGAAAGAAAG 57.291 42.857 0.00 0.00 0.00 2.62
1357 1398 4.022762 TCTCTCTCTCTTCTGGTTTTGACG 60.023 45.833 0.00 0.00 0.00 4.35
1524 1579 8.516694 TGTTAACTAACCTAGCTGCTGCTACC 62.517 46.154 20.12 0.00 41.57 3.18
1525 1580 5.623824 TGTTAACTAACCTAGCTGCTGCTAC 60.624 44.000 20.12 10.37 41.57 3.58
1526 1581 4.464951 TGTTAACTAACCTAGCTGCTGCTA 59.535 41.667 22.17 22.17 41.57 3.49
1549 1607 5.391577 ACCTAACTAGCTAGCTAGAGGTT 57.608 43.478 43.93 33.13 44.56 3.50
1585 1650 2.738013 AGGAGGAAGAAAACCGTACG 57.262 50.000 8.69 8.69 0.00 3.67
1600 1666 7.175641 AGTTTGGTTGATTTTGTGATCTAGGAG 59.824 37.037 0.00 0.00 0.00 3.69
1689 1755 1.072331 GGAAGCAGAGGGAACAGTTCA 59.928 52.381 15.36 0.00 0.00 3.18
1698 1764 2.151502 TAGACAGAGGAAGCAGAGGG 57.848 55.000 0.00 0.00 0.00 4.30
1738 1804 3.001736 GTGTCTCGGCAAGATGAAATAGC 59.998 47.826 0.00 0.00 36.11 2.97
1748 1814 2.932614 CCAGAATAAGTGTCTCGGCAAG 59.067 50.000 0.00 0.00 0.00 4.01
1751 1817 1.480954 TCCCAGAATAAGTGTCTCGGC 59.519 52.381 0.00 0.00 0.00 5.54
1779 1848 1.687563 GGAGAGAGTAGCACTCCCTC 58.312 60.000 14.93 14.93 45.81 4.30
1780 1849 3.915993 GGAGAGAGTAGCACTCCCT 57.084 57.895 11.24 6.41 46.18 4.20
1783 1852 1.606668 CCGATGGAGAGAGTAGCACTC 59.393 57.143 7.88 7.88 45.38 3.51
1785 1854 1.394618 ACCGATGGAGAGAGTAGCAC 58.605 55.000 0.00 0.00 0.00 4.40
1787 1856 2.303175 AGAACCGATGGAGAGAGTAGC 58.697 52.381 0.00 0.00 0.00 3.58
1800 1869 3.876341 ACTAAAACCACACAAGAACCGA 58.124 40.909 0.00 0.00 0.00 4.69
1801 1870 4.095185 TGAACTAAAACCACACAAGAACCG 59.905 41.667 0.00 0.00 0.00 4.44
1802 1871 5.570234 TGAACTAAAACCACACAAGAACC 57.430 39.130 0.00 0.00 0.00 3.62
1807 1876 8.552034 CAAAAACTTTGAACTAAAACCACACAA 58.448 29.630 0.00 0.00 0.00 3.33
1811 1880 7.411049 CCGTCAAAAACTTTGAACTAAAACCAC 60.411 37.037 3.50 0.00 0.00 4.16
1812 1881 6.586844 CCGTCAAAAACTTTGAACTAAAACCA 59.413 34.615 3.50 0.00 0.00 3.67
1813 1882 6.587226 ACCGTCAAAAACTTTGAACTAAAACC 59.413 34.615 3.50 0.00 0.00 3.27
1851 1927 1.398960 GCAAACGCAGACATCACTCAC 60.399 52.381 0.00 0.00 0.00 3.51
1852 1928 0.867746 GCAAACGCAGACATCACTCA 59.132 50.000 0.00 0.00 0.00 3.41
1853 1929 1.151668 AGCAAACGCAGACATCACTC 58.848 50.000 0.00 0.00 0.00 3.51
1854 1930 1.597742 AAGCAAACGCAGACATCACT 58.402 45.000 0.00 0.00 0.00 3.41
1865 1941 3.250762 TCTCAGATTCACCAAAGCAAACG 59.749 43.478 0.00 0.00 0.00 3.60
1868 1944 4.090761 AGTCTCAGATTCACCAAAGCAA 57.909 40.909 0.00 0.00 0.00 3.91
1965 2051 3.014538 TGCCCGTCCCCATGTCAT 61.015 61.111 0.00 0.00 0.00 3.06
2053 2140 9.325150 GTTAACCTTTTCAAAACAAAAGAAAGC 57.675 29.630 7.16 0.00 43.41 3.51
2068 2155 8.459635 AGACAGAAAGTTTCAGTTAACCTTTTC 58.540 33.333 17.65 4.44 28.87 2.29
2069 2156 8.349568 AGACAGAAAGTTTCAGTTAACCTTTT 57.650 30.769 17.65 0.00 28.87 2.27
2238 2332 9.442047 GGTGAACCCAGATTATATTTATCTCAG 57.558 37.037 0.00 0.00 30.05 3.35
2455 2549 2.030805 GGCACAGCTTGTTAAGAGGTTG 60.031 50.000 0.00 0.00 0.00 3.77
2492 2586 4.246458 ACAAACAGCTAGCTAAGTACAGC 58.754 43.478 18.86 0.00 42.12 4.40
2502 2651 0.519077 GTGCAGGACAAACAGCTAGC 59.481 55.000 6.62 6.62 0.00 3.42
2541 2690 3.527937 ACCCCCAGATACTGTTGTAAGT 58.472 45.455 0.00 0.00 31.80 2.24
2549 2698 2.169352 CAGACTGAACCCCCAGATACTG 59.831 54.545 0.00 0.00 37.59 2.74
2550 2699 2.044492 TCAGACTGAACCCCCAGATACT 59.956 50.000 1.64 0.00 37.59 2.12
2551 2700 2.467880 TCAGACTGAACCCCCAGATAC 58.532 52.381 1.64 0.00 37.59 2.24
2555 2704 2.887151 ATTTCAGACTGAACCCCCAG 57.113 50.000 17.52 0.00 35.89 4.45
2634 2783 0.896940 AGGTGCAGAGGTGGCATTTG 60.897 55.000 0.00 0.00 44.11 2.32
2660 2809 0.657840 GTGCTGACGTGGCATTATCC 59.342 55.000 14.47 0.33 41.86 2.59
2790 2940 5.070313 TGAATCCTTGAAAGAACAAAAGGGG 59.930 40.000 0.00 0.00 39.76 4.79
2793 2943 7.927629 TCCATTGAATCCTTGAAAGAACAAAAG 59.072 33.333 0.00 0.00 0.00 2.27
2816 2966 4.977739 AGAGGGATATCAAAATGAGGTCCA 59.022 41.667 4.83 0.00 36.28 4.02
2818 2968 6.042552 TGAGAGAGGGATATCAAAATGAGGTC 59.957 42.308 4.83 0.00 0.00 3.85
2882 3032 0.684535 TGATGTCCAGAAACCGCTCA 59.315 50.000 0.00 0.00 0.00 4.26
2964 3114 1.597742 CACACTGGGACAAAGACTGG 58.402 55.000 0.00 0.00 38.70 4.00
2976 3126 3.005554 CCTGAAGTCTAATGCACACTGG 58.994 50.000 0.00 0.00 0.00 4.00
2977 3127 2.417933 GCCTGAAGTCTAATGCACACTG 59.582 50.000 0.00 0.00 0.00 3.66
2978 3128 2.304180 AGCCTGAAGTCTAATGCACACT 59.696 45.455 0.00 0.00 0.00 3.55
2982 3132 3.711190 TGGATAGCCTGAAGTCTAATGCA 59.289 43.478 0.00 0.00 34.31 3.96
2983 3133 4.202305 ACTGGATAGCCTGAAGTCTAATGC 60.202 45.833 11.23 0.00 36.95 3.56
3013 3164 9.191995 GGTGAAGTATAAACCACAAATTTTCAG 57.808 33.333 0.00 0.00 33.94 3.02
3014 3165 8.919145 AGGTGAAGTATAAACCACAAATTTTCA 58.081 29.630 0.00 0.00 36.37 2.69
3015 3166 9.758651 AAGGTGAAGTATAAACCACAAATTTTC 57.241 29.630 0.00 0.00 36.37 2.29
3017 3168 9.541143 CAAAGGTGAAGTATAAACCACAAATTT 57.459 29.630 0.00 0.00 36.37 1.82
3018 3169 8.919145 TCAAAGGTGAAGTATAAACCACAAATT 58.081 29.630 0.00 0.00 36.37 1.82
3019 3170 8.357402 GTCAAAGGTGAAGTATAAACCACAAAT 58.643 33.333 0.00 0.00 36.37 2.32
3225 3376 3.871594 CAGCGGTCCTAAACTTTGATAGG 59.128 47.826 0.00 0.00 40.09 2.57
3364 3548 8.800370 TGTTAATAACAGCCTGTATCAAATCA 57.200 30.769 0.00 0.00 36.25 2.57
3403 3587 3.503800 ACAGTTTTTCCCAGGTAGTCC 57.496 47.619 0.00 0.00 0.00 3.85
3536 3720 2.102070 TTTCATCGGTAATGTGCGGT 57.898 45.000 0.00 0.00 36.68 5.68
3575 3759 0.937304 CAACCGGATTCATAGCCACG 59.063 55.000 9.46 0.00 0.00 4.94
3581 3765 2.092699 TGTGCCATCAACCGGATTCATA 60.093 45.455 9.46 0.00 32.57 2.15
3661 3845 5.119931 TGGTTTGCTGCAGTAATTTAGTG 57.880 39.130 18.31 6.85 0.00 2.74
3686 3870 5.992829 TGTCCATCGTGTTATTAACAAGTGT 59.007 36.000 18.00 8.87 44.16 3.55
3851 4035 4.640647 AGAAAACACTGAAGGACTTCCAAC 59.359 41.667 9.39 0.00 38.77 3.77
3852 4036 4.855340 AGAAAACACTGAAGGACTTCCAA 58.145 39.130 9.39 0.00 38.77 3.53
3854 4038 5.836821 AAAGAAAACACTGAAGGACTTCC 57.163 39.130 9.39 0.00 38.77 3.46
3943 4127 9.407380 TGCATATTGTGTAAGATCAGGTTAATT 57.593 29.630 0.00 0.00 0.00 1.40
3960 4144 3.635373 CCAGCTCCTGAAATGCATATTGT 59.365 43.478 0.00 0.00 32.44 2.71
4050 4234 2.698855 TATGGAGCTTCCTTGTGAGC 57.301 50.000 0.00 0.00 37.46 4.26
4266 4450 2.306219 GGGGTAGGGCTATGGAAGAATC 59.694 54.545 0.00 0.00 0.00 2.52
4464 4649 8.015658 CAGCACTAATGTTGTACTAAAGGAAAC 58.984 37.037 0.00 0.00 32.68 2.78
4542 4727 1.203052 GGGATGTGCCAGATGTTTGTG 59.797 52.381 0.00 0.00 38.95 3.33
4619 4804 7.061210 CAGTACATATCGTTAGCTAAGCACATC 59.939 40.741 6.38 0.00 0.00 3.06
4682 4867 1.251251 CAAAGGCCCAGAACCTTCAG 58.749 55.000 0.00 0.00 46.96 3.02
4790 4975 1.228124 TTGAGGCACTTTCCCCACG 60.228 57.895 0.00 0.00 41.55 4.94
4868 5053 4.437682 TCAAAGGATCAGAACACCAACT 57.562 40.909 0.00 0.00 0.00 3.16
4954 5141 1.341285 CCATGGCAATCCTGACCTGAA 60.341 52.381 0.00 0.00 0.00 3.02
5081 5268 8.296713 CACTAAATGCCTACAAAGCTAAGAAAA 58.703 33.333 0.00 0.00 0.00 2.29
5082 5269 7.663905 TCACTAAATGCCTACAAAGCTAAGAAA 59.336 33.333 0.00 0.00 0.00 2.52
5158 5351 9.137459 TCAGAAAATAAACTTGATTACACCCAA 57.863 29.630 0.00 0.00 0.00 4.12
5159 5352 8.698973 TCAGAAAATAAACTTGATTACACCCA 57.301 30.769 0.00 0.00 0.00 4.51
5281 5474 3.314357 GGTAAAAACGTGCTGACCTCTTT 59.686 43.478 0.00 0.00 0.00 2.52
5295 5488 9.687210 GGGATTAAAATGATATCCGGTAAAAAC 57.313 33.333 0.00 0.00 38.97 2.43
5346 5546 8.415950 TGTACAATGAAACAATACCCAAGATT 57.584 30.769 0.00 0.00 0.00 2.40
5616 5823 3.310774 GCTTCATGACAGAACGTGCATAT 59.689 43.478 0.00 0.00 0.00 1.78
5622 5829 1.151668 GCAGCTTCATGACAGAACGT 58.848 50.000 0.00 0.00 0.00 3.99
5772 5980 0.610232 GAGGCATTGTGGAAGGTGCT 60.610 55.000 0.00 0.00 37.70 4.40
5832 6040 3.895041 GGAAAAATGTCCTCCTTGAACCA 59.105 43.478 0.00 0.00 34.56 3.67
5898 6106 5.998981 TGAAGAAGGCGTCAAAGGTAAAATA 59.001 36.000 2.69 0.00 29.47 1.40
6265 6749 7.373617 TGGTAGCTCAATAATCTGTATCCAA 57.626 36.000 0.00 0.00 0.00 3.53
6292 6779 2.941428 GTGCCCACGAAAAACTTATGG 58.059 47.619 0.00 0.00 0.00 2.74
6373 6860 4.402155 TGAAGTGCAGTTTTGAGGATGTTT 59.598 37.500 8.48 0.00 0.00 2.83
6447 6936 8.977505 GCACATTGTTTATGTCATTTGTTAAGT 58.022 29.630 0.00 0.00 45.71 2.24
6448 6937 9.195411 AGCACATTGTTTATGTCATTTGTTAAG 57.805 29.630 0.00 0.00 45.71 1.85
6449 6938 9.539825 AAGCACATTGTTTATGTCATTTGTTAA 57.460 25.926 0.00 0.00 45.71 2.01
6450 6939 8.976471 CAAGCACATTGTTTATGTCATTTGTTA 58.024 29.630 0.00 0.00 45.71 2.41
6453 6942 7.640616 TCAAGCACATTGTTTATGTCATTTG 57.359 32.000 0.00 0.00 45.71 2.32
6484 7000 0.237761 GATGCAGCGATCAATCCTGC 59.762 55.000 18.64 18.64 44.31 4.85
6594 7110 2.420022 CAGGCCGTTCATCCTTAACTTG 59.580 50.000 0.00 0.00 0.00 3.16
6678 7194 8.400186 CACATGCAGGAAAAGAAAAAGAAAAAT 58.600 29.630 4.84 0.00 0.00 1.82
7168 7710 5.392995 TCCAGAAGGAAATGGAAAATGTGA 58.607 37.500 0.00 0.00 42.61 3.58
7231 7782 2.352960 GGAGAGAATGCATTTGGTCGAC 59.647 50.000 14.33 7.13 0.00 4.20
7243 7794 0.747283 GCTGCACCCTGGAGAGAATG 60.747 60.000 0.00 0.00 38.14 2.67
7244 7795 0.913451 AGCTGCACCCTGGAGAGAAT 60.913 55.000 1.02 0.00 38.14 2.40
7363 7939 7.728847 AAACAGATTAAATGAACAAAAGGCC 57.271 32.000 0.00 0.00 0.00 5.19
7387 7965 4.960938 AGAATCACAGCGGCTCATAAATA 58.039 39.130 0.00 0.00 0.00 1.40
7388 7966 3.812053 GAGAATCACAGCGGCTCATAAAT 59.188 43.478 0.00 0.00 33.17 1.40
7389 7967 3.118629 AGAGAATCACAGCGGCTCATAAA 60.119 43.478 0.00 0.00 37.82 1.40
7390 7968 2.432146 AGAGAATCACAGCGGCTCATAA 59.568 45.455 0.00 0.00 37.82 1.90
7431 8010 5.510520 GCCATTTTGTCTTACAATTGTGGGA 60.511 40.000 21.42 14.89 38.00 4.37
7493 8072 3.441101 ACCTGAACAGAGGCTGTGTATA 58.559 45.455 18.41 9.00 44.62 1.47
7504 8083 4.416516 TCAGAGACCATTACCTGAACAGA 58.583 43.478 3.19 0.00 33.26 3.41
7525 8104 5.008019 TGTTGTCTTCCGGTAGTATCGTATC 59.992 44.000 8.06 0.00 0.00 2.24
7529 8108 3.376234 TCTGTTGTCTTCCGGTAGTATCG 59.624 47.826 8.06 0.00 0.00 2.92
7538 8117 0.679505 TCCCACTCTGTTGTCTTCCG 59.320 55.000 0.00 0.00 0.00 4.30
7668 8248 2.880890 GGTGTTATCTAAGCCCTGCATG 59.119 50.000 0.00 0.00 0.00 4.06
7672 8252 2.981859 ACGGTGTTATCTAAGCCCTG 57.018 50.000 0.00 0.00 0.00 4.45
7779 8359 1.341679 GCCGGGGTAATCCTCCTTTTT 60.342 52.381 2.18 0.00 35.33 1.94
7780 8360 0.257905 GCCGGGGTAATCCTCCTTTT 59.742 55.000 2.18 0.00 35.33 2.27
7781 8361 1.642513 GGCCGGGGTAATCCTCCTTT 61.643 60.000 2.18 0.00 35.33 3.11
7782 8362 2.076803 GGCCGGGGTAATCCTCCTT 61.077 63.158 2.18 0.00 35.33 3.36
7783 8363 2.447959 GGCCGGGGTAATCCTCCT 60.448 66.667 2.18 0.00 35.33 3.69
7784 8364 2.447959 AGGCCGGGGTAATCCTCC 60.448 66.667 2.18 0.00 35.33 4.30
7785 8365 1.459730 AGAGGCCGGGGTAATCCTC 60.460 63.158 13.92 13.92 44.09 3.71
7786 8366 1.766461 CAGAGGCCGGGGTAATCCT 60.766 63.158 2.18 0.00 35.33 3.24
7787 8367 2.829592 CAGAGGCCGGGGTAATCC 59.170 66.667 2.18 0.00 0.00 3.01
7788 8368 2.056906 ATGCAGAGGCCGGGGTAATC 62.057 60.000 2.18 0.00 40.13 1.75
7789 8369 2.056906 GATGCAGAGGCCGGGGTAAT 62.057 60.000 2.18 0.00 40.13 1.89
7790 8370 2.690881 ATGCAGAGGCCGGGGTAA 60.691 61.111 2.18 0.00 40.13 2.85
7791 8371 2.306715 TAGATGCAGAGGCCGGGGTA 62.307 60.000 2.18 0.00 40.13 3.69
7792 8372 3.696518 TAGATGCAGAGGCCGGGGT 62.697 63.158 2.18 0.00 40.13 4.95
7793 8373 2.844362 TAGATGCAGAGGCCGGGG 60.844 66.667 2.18 0.00 40.13 5.73
7794 8374 2.739784 CTAGATGCAGAGGCCGGG 59.260 66.667 2.18 0.00 40.13 5.73
7795 8375 2.136878 ACCTAGATGCAGAGGCCGG 61.137 63.158 11.12 0.00 40.13 6.13
7796 8376 1.068753 CACCTAGATGCAGAGGCCG 59.931 63.158 11.12 1.12 40.13 6.13
7797 8377 1.055040 ATCACCTAGATGCAGAGGCC 58.945 55.000 11.12 0.00 40.13 5.19
7798 8378 2.166821 CATCACCTAGATGCAGAGGC 57.833 55.000 11.12 0.00 46.90 4.70
7806 8386 1.544982 GGCTGCATGCATCACCTAGAT 60.545 52.381 22.97 0.00 45.15 1.98
7807 8387 0.179037 GGCTGCATGCATCACCTAGA 60.179 55.000 22.97 0.00 45.15 2.43
7808 8388 0.464916 TGGCTGCATGCATCACCTAG 60.465 55.000 22.97 8.76 45.15 3.02
7809 8389 0.184211 ATGGCTGCATGCATCACCTA 59.816 50.000 22.97 13.41 45.15 3.08
7810 8390 0.686441 AATGGCTGCATGCATCACCT 60.686 50.000 22.97 10.63 45.15 4.00
7811 8391 0.177141 AAATGGCTGCATGCATCACC 59.823 50.000 22.97 22.12 45.15 4.02
7812 8392 2.018542 AAAATGGCTGCATGCATCAC 57.981 45.000 22.97 14.61 45.15 3.06
7813 8393 4.409718 AATAAAATGGCTGCATGCATCA 57.590 36.364 22.97 21.78 45.15 3.07
7814 8394 7.429636 AATTAATAAAATGGCTGCATGCATC 57.570 32.000 22.97 17.75 45.15 3.91
7815 8395 9.509956 AATAATTAATAAAATGGCTGCATGCAT 57.490 25.926 22.97 6.91 45.15 3.96
7816 8396 8.905660 AATAATTAATAAAATGGCTGCATGCA 57.094 26.923 21.29 21.29 45.15 3.96
7817 8397 9.815936 GAAATAATTAATAAAATGGCTGCATGC 57.184 29.630 11.82 11.82 41.94 4.06
7820 8400 9.881649 TGTGAAATAATTAATAAAATGGCTGCA 57.118 25.926 0.50 0.00 0.00 4.41
7850 8430 9.933240 ACTACCTGATGTACTACTTTATAAGGT 57.067 33.333 5.49 5.49 37.95 3.50
7869 8449 0.976641 TGGTGGCTTCAGACTACCTG 59.023 55.000 0.00 0.00 44.27 4.00
7870 8450 1.834263 GATGGTGGCTTCAGACTACCT 59.166 52.381 0.00 0.00 32.68 3.08
7871 8451 1.834263 AGATGGTGGCTTCAGACTACC 59.166 52.381 0.00 0.00 0.00 3.18
7872 8452 3.618690 AAGATGGTGGCTTCAGACTAC 57.381 47.619 0.00 0.00 0.00 2.73
7873 8453 3.133003 GCTAAGATGGTGGCTTCAGACTA 59.867 47.826 0.00 0.00 0.00 2.59
7874 8454 2.093235 GCTAAGATGGTGGCTTCAGACT 60.093 50.000 0.00 0.00 0.00 3.24
7875 8455 2.284190 GCTAAGATGGTGGCTTCAGAC 58.716 52.381 0.00 0.00 0.00 3.51
7876 8456 1.908619 TGCTAAGATGGTGGCTTCAGA 59.091 47.619 0.00 0.00 0.00 3.27
7877 8457 2.408271 TGCTAAGATGGTGGCTTCAG 57.592 50.000 0.00 0.00 0.00 3.02
7878 8458 2.224744 TGTTGCTAAGATGGTGGCTTCA 60.225 45.455 0.00 0.00 0.00 3.02
7879 8459 2.436417 TGTTGCTAAGATGGTGGCTTC 58.564 47.619 0.00 0.00 0.00 3.86
7880 8460 2.584835 TGTTGCTAAGATGGTGGCTT 57.415 45.000 0.00 0.00 0.00 4.35
7881 8461 2.240667 AGATGTTGCTAAGATGGTGGCT 59.759 45.455 0.00 0.00 0.00 4.75
7882 8462 2.357009 CAGATGTTGCTAAGATGGTGGC 59.643 50.000 0.00 0.00 0.00 5.01
7883 8463 3.614092 ACAGATGTTGCTAAGATGGTGG 58.386 45.455 0.00 0.00 0.00 4.61
7884 8464 3.308053 CGACAGATGTTGCTAAGATGGTG 59.692 47.826 0.00 0.00 0.00 4.17
7885 8465 3.055819 ACGACAGATGTTGCTAAGATGGT 60.056 43.478 0.00 0.00 32.66 3.55
7886 8466 3.525537 ACGACAGATGTTGCTAAGATGG 58.474 45.455 0.00 0.00 32.66 3.51
7887 8467 5.807520 AGTAACGACAGATGTTGCTAAGATG 59.192 40.000 0.00 0.00 39.91 2.90
7888 8468 5.967088 AGTAACGACAGATGTTGCTAAGAT 58.033 37.500 0.00 0.00 39.91 2.40
7889 8469 5.386958 AGTAACGACAGATGTTGCTAAGA 57.613 39.130 0.00 0.00 39.91 2.10
7890 8470 5.864474 AGAAGTAACGACAGATGTTGCTAAG 59.136 40.000 0.00 0.00 40.65 2.18
7891 8471 5.779922 AGAAGTAACGACAGATGTTGCTAA 58.220 37.500 0.00 0.00 40.65 3.09
7892 8472 5.386958 AGAAGTAACGACAGATGTTGCTA 57.613 39.130 0.00 0.00 40.65 3.49
7893 8473 4.258702 AGAAGTAACGACAGATGTTGCT 57.741 40.909 0.00 0.00 42.85 3.91
7894 8474 5.232414 GGATAGAAGTAACGACAGATGTTGC 59.768 44.000 0.00 0.00 32.66 4.17
7895 8475 6.253727 GTGGATAGAAGTAACGACAGATGTTG 59.746 42.308 0.00 0.00 35.56 3.33
7896 8476 6.153000 AGTGGATAGAAGTAACGACAGATGTT 59.847 38.462 0.00 0.00 0.00 2.71
7897 8477 5.652891 AGTGGATAGAAGTAACGACAGATGT 59.347 40.000 0.00 0.00 0.00 3.06
7898 8478 6.137794 AGTGGATAGAAGTAACGACAGATG 57.862 41.667 0.00 0.00 0.00 2.90
7899 8479 6.377429 TCAAGTGGATAGAAGTAACGACAGAT 59.623 38.462 0.00 0.00 0.00 2.90
7900 8480 5.708697 TCAAGTGGATAGAAGTAACGACAGA 59.291 40.000 0.00 0.00 0.00 3.41
7901 8481 5.950883 TCAAGTGGATAGAAGTAACGACAG 58.049 41.667 0.00 0.00 0.00 3.51
7902 8482 5.970317 TCAAGTGGATAGAAGTAACGACA 57.030 39.130 0.00 0.00 0.00 4.35
7903 8483 6.561614 TCATCAAGTGGATAGAAGTAACGAC 58.438 40.000 0.00 0.00 33.95 4.34
7904 8484 6.769134 TCATCAAGTGGATAGAAGTAACGA 57.231 37.500 0.00 0.00 33.95 3.85
7905 8485 6.477033 CCTTCATCAAGTGGATAGAAGTAACG 59.523 42.308 13.90 0.00 38.31 3.18
7906 8486 7.278868 CACCTTCATCAAGTGGATAGAAGTAAC 59.721 40.741 13.90 0.00 38.31 2.50
7907 8487 7.038302 ACACCTTCATCAAGTGGATAGAAGTAA 60.038 37.037 13.90 0.00 38.31 2.24
7908 8488 6.440647 ACACCTTCATCAAGTGGATAGAAGTA 59.559 38.462 13.90 0.00 38.31 2.24
7909 8489 5.249393 ACACCTTCATCAAGTGGATAGAAGT 59.751 40.000 13.90 5.05 38.31 3.01
7910 8490 5.583854 CACACCTTCATCAAGTGGATAGAAG 59.416 44.000 10.48 10.48 38.94 2.85
7911 8491 5.491070 CACACCTTCATCAAGTGGATAGAA 58.509 41.667 0.00 0.00 33.95 2.10
7912 8492 4.623886 GCACACCTTCATCAAGTGGATAGA 60.624 45.833 0.00 0.00 33.95 1.98
7913 8493 3.624861 GCACACCTTCATCAAGTGGATAG 59.375 47.826 0.00 0.00 33.95 2.08
7914 8494 3.609853 GCACACCTTCATCAAGTGGATA 58.390 45.455 0.00 0.00 33.95 2.59
7915 8495 2.440409 GCACACCTTCATCAAGTGGAT 58.560 47.619 0.00 0.00 36.39 3.41
7916 8496 1.545428 GGCACACCTTCATCAAGTGGA 60.545 52.381 0.00 0.00 0.00 4.02
7917 8497 0.883833 GGCACACCTTCATCAAGTGG 59.116 55.000 0.00 0.00 0.00 4.00
7918 8498 0.518636 CGGCACACCTTCATCAAGTG 59.481 55.000 0.00 0.00 0.00 3.16
7919 8499 0.396435 TCGGCACACCTTCATCAAGT 59.604 50.000 0.00 0.00 0.00 3.16
7920 8500 1.742761 ATCGGCACACCTTCATCAAG 58.257 50.000 0.00 0.00 0.00 3.02
7921 8501 2.236146 ACTATCGGCACACCTTCATCAA 59.764 45.455 0.00 0.00 0.00 2.57
7922 8502 1.831106 ACTATCGGCACACCTTCATCA 59.169 47.619 0.00 0.00 0.00 3.07
7923 8503 2.474816 GACTATCGGCACACCTTCATC 58.525 52.381 0.00 0.00 0.00 2.92
7924 8504 1.139058 GGACTATCGGCACACCTTCAT 59.861 52.381 0.00 0.00 0.00 2.57
7925 8505 0.535335 GGACTATCGGCACACCTTCA 59.465 55.000 0.00 0.00 0.00 3.02
7926 8506 0.535335 TGGACTATCGGCACACCTTC 59.465 55.000 0.00 0.00 0.00 3.46
7927 8507 0.981183 TTGGACTATCGGCACACCTT 59.019 50.000 0.00 0.00 0.00 3.50
7928 8508 0.981183 TTTGGACTATCGGCACACCT 59.019 50.000 0.00 0.00 0.00 4.00
7929 8509 1.084289 GTTTGGACTATCGGCACACC 58.916 55.000 0.00 0.00 0.00 4.16
7930 8510 1.084289 GGTTTGGACTATCGGCACAC 58.916 55.000 0.00 0.00 0.00 3.82
7931 8511 0.981183 AGGTTTGGACTATCGGCACA 59.019 50.000 0.00 0.00 0.00 4.57
7932 8512 2.973694 TAGGTTTGGACTATCGGCAC 57.026 50.000 0.00 0.00 0.00 5.01
7933 8513 4.202284 GGTATTAGGTTTGGACTATCGGCA 60.202 45.833 0.00 0.00 0.00 5.69
7934 8514 4.202284 TGGTATTAGGTTTGGACTATCGGC 60.202 45.833 0.00 0.00 0.00 5.54
7935 8515 5.540400 TGGTATTAGGTTTGGACTATCGG 57.460 43.478 0.00 0.00 0.00 4.18
7936 8516 6.019318 CGTTTGGTATTAGGTTTGGACTATCG 60.019 42.308 0.00 0.00 0.00 2.92
7937 8517 6.259387 CCGTTTGGTATTAGGTTTGGACTATC 59.741 42.308 0.00 0.00 0.00 2.08
7938 8518 6.070078 TCCGTTTGGTATTAGGTTTGGACTAT 60.070 38.462 0.00 0.00 36.30 2.12
7939 8519 5.248020 TCCGTTTGGTATTAGGTTTGGACTA 59.752 40.000 0.00 0.00 36.30 2.59
7940 8520 4.041938 TCCGTTTGGTATTAGGTTTGGACT 59.958 41.667 0.00 0.00 36.30 3.85
7941 8521 4.154737 GTCCGTTTGGTATTAGGTTTGGAC 59.845 45.833 0.00 0.00 35.84 4.02
7942 8522 4.202440 TGTCCGTTTGGTATTAGGTTTGGA 60.202 41.667 0.00 0.00 36.30 3.53
7943 8523 4.073549 TGTCCGTTTGGTATTAGGTTTGG 58.926 43.478 0.00 0.00 36.30 3.28
7944 8524 5.413213 TGATGTCCGTTTGGTATTAGGTTTG 59.587 40.000 0.00 0.00 36.30 2.93
7945 8525 5.413523 GTGATGTCCGTTTGGTATTAGGTTT 59.586 40.000 0.00 0.00 36.30 3.27
7946 8526 4.939439 GTGATGTCCGTTTGGTATTAGGTT 59.061 41.667 0.00 0.00 36.30 3.50
7947 8527 4.020039 TGTGATGTCCGTTTGGTATTAGGT 60.020 41.667 0.00 0.00 36.30 3.08
7948 8528 4.331717 GTGTGATGTCCGTTTGGTATTAGG 59.668 45.833 0.00 0.00 36.30 2.69
7949 8529 4.331717 GGTGTGATGTCCGTTTGGTATTAG 59.668 45.833 0.00 0.00 36.30 1.73
7950 8530 4.255301 GGTGTGATGTCCGTTTGGTATTA 58.745 43.478 0.00 0.00 36.30 0.98
7951 8531 3.078837 GGTGTGATGTCCGTTTGGTATT 58.921 45.455 0.00 0.00 36.30 1.89
7952 8532 2.039216 TGGTGTGATGTCCGTTTGGTAT 59.961 45.455 0.00 0.00 36.30 2.73
7953 8533 1.416772 TGGTGTGATGTCCGTTTGGTA 59.583 47.619 0.00 0.00 36.30 3.25
7954 8534 0.181587 TGGTGTGATGTCCGTTTGGT 59.818 50.000 0.00 0.00 36.30 3.67
7955 8535 1.313772 TTGGTGTGATGTCCGTTTGG 58.686 50.000 0.00 0.00 0.00 3.28
7956 8536 2.858260 GCTTTGGTGTGATGTCCGTTTG 60.858 50.000 0.00 0.00 0.00 2.93
7957 8537 1.336755 GCTTTGGTGTGATGTCCGTTT 59.663 47.619 0.00 0.00 0.00 3.60
7958 8538 0.951558 GCTTTGGTGTGATGTCCGTT 59.048 50.000 0.00 0.00 0.00 4.44
7959 8539 0.889186 GGCTTTGGTGTGATGTCCGT 60.889 55.000 0.00 0.00 0.00 4.69
7960 8540 0.606401 AGGCTTTGGTGTGATGTCCG 60.606 55.000 0.00 0.00 0.00 4.79
7961 8541 2.488153 GTTAGGCTTTGGTGTGATGTCC 59.512 50.000 0.00 0.00 0.00 4.02
7962 8542 3.146066 TGTTAGGCTTTGGTGTGATGTC 58.854 45.455 0.00 0.00 0.00 3.06
7963 8543 3.222173 TGTTAGGCTTTGGTGTGATGT 57.778 42.857 0.00 0.00 0.00 3.06
7964 8544 4.012374 AGATGTTAGGCTTTGGTGTGATG 58.988 43.478 0.00 0.00 0.00 3.07
7965 8545 4.307032 AGATGTTAGGCTTTGGTGTGAT 57.693 40.909 0.00 0.00 0.00 3.06
7966 8546 3.788227 AGATGTTAGGCTTTGGTGTGA 57.212 42.857 0.00 0.00 0.00 3.58
7967 8547 5.619981 GCTTTAGATGTTAGGCTTTGGTGTG 60.620 44.000 0.00 0.00 0.00 3.82
7968 8548 4.459337 GCTTTAGATGTTAGGCTTTGGTGT 59.541 41.667 0.00 0.00 0.00 4.16
7969 8549 4.142381 GGCTTTAGATGTTAGGCTTTGGTG 60.142 45.833 0.00 0.00 0.00 4.17
7970 8550 4.017126 GGCTTTAGATGTTAGGCTTTGGT 58.983 43.478 0.00 0.00 0.00 3.67
7971 8551 4.016444 TGGCTTTAGATGTTAGGCTTTGG 58.984 43.478 0.00 0.00 35.66 3.28
7972 8552 4.943705 TCTGGCTTTAGATGTTAGGCTTTG 59.056 41.667 0.00 0.00 35.66 2.77
7973 8553 5.179452 TCTGGCTTTAGATGTTAGGCTTT 57.821 39.130 0.00 0.00 35.66 3.51
7974 8554 4.775236 CTCTGGCTTTAGATGTTAGGCTT 58.225 43.478 0.00 0.00 35.66 4.35
7975 8555 3.432890 GCTCTGGCTTTAGATGTTAGGCT 60.433 47.826 0.00 0.00 35.66 4.58
7976 8556 2.875317 GCTCTGGCTTTAGATGTTAGGC 59.125 50.000 0.00 0.00 35.22 3.93
7977 8557 3.471680 GGCTCTGGCTTTAGATGTTAGG 58.528 50.000 0.00 0.00 38.73 2.69
7978 8558 3.471680 GGGCTCTGGCTTTAGATGTTAG 58.528 50.000 0.00 0.00 38.73 2.34
7979 8559 2.172717 GGGGCTCTGGCTTTAGATGTTA 59.827 50.000 0.00 0.00 38.73 2.41
7980 8560 1.064389 GGGGCTCTGGCTTTAGATGTT 60.064 52.381 0.00 0.00 38.73 2.71
7981 8561 0.548510 GGGGCTCTGGCTTTAGATGT 59.451 55.000 0.00 0.00 38.73 3.06
7982 8562 0.179006 GGGGGCTCTGGCTTTAGATG 60.179 60.000 0.00 0.00 38.73 2.90
7983 8563 0.624500 TGGGGGCTCTGGCTTTAGAT 60.625 55.000 0.00 0.00 38.73 1.98
7984 8564 0.844661 TTGGGGGCTCTGGCTTTAGA 60.845 55.000 0.00 0.00 38.73 2.10
7985 8565 0.681243 GTTGGGGGCTCTGGCTTTAG 60.681 60.000 0.00 0.00 38.73 1.85
7986 8566 1.382629 GTTGGGGGCTCTGGCTTTA 59.617 57.895 0.00 0.00 38.73 1.85
7987 8567 2.118294 GTTGGGGGCTCTGGCTTT 59.882 61.111 0.00 0.00 38.73 3.51
7988 8568 3.984732 GGTTGGGGGCTCTGGCTT 61.985 66.667 0.00 0.00 38.73 4.35
7990 8570 4.299796 TTGGTTGGGGGCTCTGGC 62.300 66.667 0.00 0.00 37.82 4.85
7991 8571 2.036256 CTTGGTTGGGGGCTCTGG 59.964 66.667 0.00 0.00 0.00 3.86
7992 8572 2.677875 GCTTGGTTGGGGGCTCTG 60.678 66.667 0.00 0.00 0.00 3.35
7993 8573 3.984732 GGCTTGGTTGGGGGCTCT 61.985 66.667 0.00 0.00 0.00 4.09
7994 8574 4.299796 TGGCTTGGTTGGGGGCTC 62.300 66.667 0.00 0.00 0.00 4.70
7995 8575 4.621087 GTGGCTTGGTTGGGGGCT 62.621 66.667 0.00 0.00 0.00 5.19
7996 8576 2.796734 TATGTGGCTTGGTTGGGGGC 62.797 60.000 0.00 0.00 0.00 5.80
7997 8577 0.970427 GTATGTGGCTTGGTTGGGGG 60.970 60.000 0.00 0.00 0.00 5.40
7998 8578 0.970427 GGTATGTGGCTTGGTTGGGG 60.970 60.000 0.00 0.00 0.00 4.96
7999 8579 1.312371 CGGTATGTGGCTTGGTTGGG 61.312 60.000 0.00 0.00 0.00 4.12
8000 8580 1.312371 CCGGTATGTGGCTTGGTTGG 61.312 60.000 0.00 0.00 0.00 3.77
8001 8581 1.312371 CCCGGTATGTGGCTTGGTTG 61.312 60.000 0.00 0.00 0.00 3.77
8002 8582 1.001393 CCCGGTATGTGGCTTGGTT 60.001 57.895 0.00 0.00 0.00 3.67
8003 8583 1.785353 AACCCGGTATGTGGCTTGGT 61.785 55.000 0.00 0.00 0.00 3.67
8004 8584 0.610785 AAACCCGGTATGTGGCTTGG 60.611 55.000 0.00 0.00 0.00 3.61
8005 8585 0.525761 CAAACCCGGTATGTGGCTTG 59.474 55.000 0.00 0.00 0.00 4.01
8006 8586 0.610785 CCAAACCCGGTATGTGGCTT 60.611 55.000 0.00 0.00 0.00 4.35
8007 8587 1.001393 CCAAACCCGGTATGTGGCT 60.001 57.895 0.00 0.00 0.00 4.75
8008 8588 2.049767 CCCAAACCCGGTATGTGGC 61.050 63.158 6.64 0.00 0.00 5.01
8009 8589 1.379309 CCCCAAACCCGGTATGTGG 60.379 63.158 0.00 2.53 0.00 4.17
8010 8590 2.049767 GCCCCAAACCCGGTATGTG 61.050 63.158 0.00 0.00 0.00 3.21
8011 8591 2.357446 GCCCCAAACCCGGTATGT 59.643 61.111 0.00 0.00 0.00 2.29
8012 8592 2.826738 CGCCCCAAACCCGGTATG 60.827 66.667 0.00 0.00 0.00 2.39
8013 8593 4.807631 GCGCCCCAAACCCGGTAT 62.808 66.667 0.00 0.00 0.00 2.73
8034 8614 4.477975 GAGAGTGCGTCGGACCGG 62.478 72.222 15.25 0.00 0.00 5.28
8035 8615 3.052620 ATGAGAGTGCGTCGGACCG 62.053 63.158 13.70 7.84 0.00 4.79
8036 8616 1.517257 CATGAGAGTGCGTCGGACC 60.517 63.158 13.70 5.33 0.00 4.46
8037 8617 1.073216 CACATGAGAGTGCGTCGGAC 61.073 60.000 9.08 9.08 32.04 4.79
8038 8618 1.212751 CACATGAGAGTGCGTCGGA 59.787 57.895 0.00 0.00 32.04 4.55
8039 8619 1.073216 GACACATGAGAGTGCGTCGG 61.073 60.000 0.00 0.00 43.23 4.79
8040 8620 1.398762 CGACACATGAGAGTGCGTCG 61.399 60.000 0.00 3.55 44.70 5.12
8041 8621 0.387367 ACGACACATGAGAGTGCGTC 60.387 55.000 0.00 0.00 43.39 5.19
8042 8622 0.387367 GACGACACATGAGAGTGCGT 60.387 55.000 0.00 13.30 46.58 5.24
8043 8623 1.398762 CGACGACACATGAGAGTGCG 61.399 60.000 0.00 0.00 43.23 5.34
8044 8624 1.678269 GCGACGACACATGAGAGTGC 61.678 60.000 0.00 1.83 43.23 4.40
8045 8625 1.073216 GGCGACGACACATGAGAGTG 61.073 60.000 0.00 0.00 44.93 3.51
8046 8626 1.213013 GGCGACGACACATGAGAGT 59.787 57.895 0.00 0.00 0.00 3.24
8047 8627 4.079090 GGCGACGACACATGAGAG 57.921 61.111 0.00 0.00 0.00 3.20
8059 8639 3.195698 GTGGAAGATGGCGGCGAC 61.196 66.667 12.98 9.31 0.00 5.19
8060 8640 3.390521 AGTGGAAGATGGCGGCGA 61.391 61.111 12.98 0.00 0.00 5.54
8061 8641 2.930385 ATCAGTGGAAGATGGCGGCG 62.930 60.000 0.51 0.51 0.00 6.46
8062 8642 1.153086 ATCAGTGGAAGATGGCGGC 60.153 57.895 0.00 0.00 0.00 6.53
8063 8643 0.178767 TGATCAGTGGAAGATGGCGG 59.821 55.000 0.00 0.00 0.00 6.13
8064 8644 2.028420 TTGATCAGTGGAAGATGGCG 57.972 50.000 0.00 0.00 0.00 5.69
8065 8645 4.202090 GGAAATTGATCAGTGGAAGATGGC 60.202 45.833 0.00 0.00 0.00 4.40
8066 8646 4.951715 TGGAAATTGATCAGTGGAAGATGG 59.048 41.667 0.00 0.00 0.00 3.51
8067 8647 5.884232 TCTGGAAATTGATCAGTGGAAGATG 59.116 40.000 0.00 0.00 0.00 2.90
8068 8648 6.070951 TCTGGAAATTGATCAGTGGAAGAT 57.929 37.500 0.00 0.00 0.00 2.40
8069 8649 5.494724 CTCTGGAAATTGATCAGTGGAAGA 58.505 41.667 0.00 0.00 0.00 2.87
8070 8650 4.096081 GCTCTGGAAATTGATCAGTGGAAG 59.904 45.833 0.00 0.00 0.00 3.46
8071 8651 4.012374 GCTCTGGAAATTGATCAGTGGAA 58.988 43.478 0.00 0.00 0.00 3.53
8072 8652 3.614092 GCTCTGGAAATTGATCAGTGGA 58.386 45.455 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.