Multiple sequence alignment - TraesCS1A01G409800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G409800 chr1A 100.000 3877 0 0 1653 5529 571288415 571292291 0.000000e+00 7160.0
1 TraesCS1A01G409800 chr1A 100.000 1350 0 0 1 1350 571286763 571288112 0.000000e+00 2494.0
2 TraesCS1A01G409800 chr1A 84.211 247 32 5 867 1107 170110066 170110311 3.330000e-57 233.0
3 TraesCS1A01G409800 chr1B 94.091 3351 121 25 1653 4952 661514159 661517483 0.000000e+00 5020.0
4 TraesCS1A01G409800 chr1B 87.960 299 21 11 225 513 661512927 661513220 6.860000e-89 339.0
5 TraesCS1A01G409800 chr1B 94.495 109 5 1 509 617 661513262 661513369 3.430000e-37 167.0
6 TraesCS1A01G409800 chr1B 94.000 100 6 0 5099 5198 661517482 661517581 9.590000e-33 152.0
7 TraesCS1A01G409800 chr1B 84.091 132 10 2 746 866 661513365 661513496 3.500000e-22 117.0
8 TraesCS1A01G409800 chr1D 95.264 2977 92 23 2121 5070 475517997 475520951 0.000000e+00 4671.0
9 TraesCS1A01G409800 chr1D 92.489 892 41 18 5 874 475515701 475516588 0.000000e+00 1253.0
10 TraesCS1A01G409800 chr1D 94.118 476 17 2 5065 5529 475528297 475528772 0.000000e+00 713.0
11 TraesCS1A01G409800 chr1D 92.569 471 21 8 1653 2112 475517233 475517700 0.000000e+00 664.0
12 TraesCS1A01G409800 chr1D 89.858 493 41 3 866 1350 475516700 475517191 4.700000e-175 625.0
13 TraesCS1A01G409800 chr1D 97.619 42 1 0 1952 1993 475517302 475517343 7.680000e-09 73.1
14 TraesCS1A01G409800 chr5D 84.677 248 30 5 867 1107 433038943 433039189 1.990000e-59 241.0
15 TraesCS1A01G409800 chr6B 84.274 248 32 4 867 1107 64118756 64118509 9.260000e-58 235.0
16 TraesCS1A01G409800 chr6B 83.468 248 34 3 867 1107 584239373 584239620 2.000000e-54 224.0
17 TraesCS1A01G409800 chr7A 83.468 248 34 3 867 1107 601862672 601862425 2.000000e-54 224.0
18 TraesCS1A01G409800 chr4A 82.661 248 34 5 867 1107 418427519 418427274 1.560000e-50 211.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G409800 chr1A 571286763 571292291 5528 False 4827.00 7160 100.0000 1 5529 2 chr1A.!!$F2 5528
1 TraesCS1A01G409800 chr1B 661512927 661517581 4654 False 1159.00 5020 90.9274 225 5198 5 chr1B.!!$F1 4973
2 TraesCS1A01G409800 chr1D 475515701 475520951 5250 False 1457.22 4671 93.5598 5 5070 5 chr1D.!!$F2 5065

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
998 1231 0.839946 AGGCAGGTGTTCAGTGAACT 59.160 50.000 30.69 13.03 42.39 3.01 F
1161 1395 0.373024 GCTGACTGCTGAGAAATCGC 59.627 55.000 0.00 0.00 38.95 4.58 F
2397 2957 1.448893 GTAATTCACCGCCGGCTGA 60.449 57.895 25.71 19.59 0.00 4.26 F
3719 4285 2.158475 ACACCATTTCTGCTTCAGGGAA 60.158 45.455 0.00 0.00 31.51 3.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2530 3090 0.251916 TGGTCAAAGGGCACGATAGG 59.748 55.000 0.00 0.0 43.77 2.57 R
2988 3549 4.452455 CAGGATTGTCCAGACACTAAACAC 59.548 45.833 0.00 0.0 41.67 3.32 R
4245 4820 0.179051 AACACCGGCGGACAAACTAA 60.179 50.000 35.78 0.0 0.00 2.24 R
5418 6010 0.033208 AATCGCCCATCCCATGTTGT 60.033 50.000 0.00 0.0 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
256 261 1.919654 TGAATCCCCTCCGATTTTGGA 59.080 47.619 0.00 0.00 32.56 3.53
421 434 2.165301 CGGCCGTTCGAGATTGGTC 61.165 63.158 19.50 0.00 0.00 4.02
631 699 6.593268 AACTCTTTCCTCTAGTGGTAGTTC 57.407 41.667 10.56 0.00 0.00 3.01
640 708 2.902705 AGTGGTAGTTCGCACTTTGA 57.097 45.000 0.00 0.00 34.06 2.69
673 744 3.709587 ACTCCTCTTTCTTCCCGTGATA 58.290 45.455 0.00 0.00 0.00 2.15
688 759 3.554524 CGTGATAGTTTGCACTTTGGTG 58.445 45.455 0.00 0.00 45.53 4.17
689 760 3.003275 CGTGATAGTTTGCACTTTGGTGT 59.997 43.478 0.00 0.00 44.65 4.16
691 762 4.036262 GTGATAGTTTGCACTTTGGTGTGA 59.964 41.667 0.00 0.00 44.65 3.58
692 763 4.642437 TGATAGTTTGCACTTTGGTGTGAA 59.358 37.500 0.00 0.00 44.65 3.18
725 798 3.140325 TCAGAATTCTGGAACACCACC 57.860 47.619 30.33 0.00 43.91 4.61
741 814 0.944386 CACCGTGTCTGTTTTCAGGG 59.056 55.000 0.00 0.00 46.94 4.45
746 819 2.741878 CGTGTCTGTTTTCAGGGTCACT 60.742 50.000 0.00 0.00 46.94 3.41
765 838 2.490115 ACTCTCTACCTCTGCGTGAAAG 59.510 50.000 0.00 0.00 0.00 2.62
766 839 1.202582 TCTCTACCTCTGCGTGAAAGC 59.797 52.381 0.00 0.00 37.71 3.51
769 842 2.163815 TCTACCTCTGCGTGAAAGCTAC 59.836 50.000 0.00 0.00 38.13 3.58
777 850 1.429463 CGTGAAAGCTACTCCACCAC 58.571 55.000 0.00 0.00 0.00 4.16
869 1090 1.880027 CTGGTTGGTTGGTTCTGCTAC 59.120 52.381 0.00 0.00 0.00 3.58
883 1108 4.235762 CTACGCCCGGACCCATGG 62.236 72.222 0.73 4.14 0.00 3.66
897 1122 3.356290 ACCCATGGAAAACTAGCACATC 58.644 45.455 15.22 0.00 0.00 3.06
916 1141 5.121454 CACATCTGAAAGCTTACTTCACCTC 59.879 44.000 0.00 0.00 34.05 3.85
924 1149 7.226720 TGAAAGCTTACTTCACCTCTACTTTTG 59.773 37.037 0.00 0.00 34.05 2.44
929 1154 4.377897 ACTTCACCTCTACTTTTGGTTCG 58.622 43.478 0.00 0.00 30.72 3.95
932 1157 2.806244 CACCTCTACTTTTGGTTCGGTG 59.194 50.000 0.00 0.00 34.52 4.94
946 1177 6.488769 TGGTTCGGTGAATTAGTATATGGT 57.511 37.500 0.00 0.00 0.00 3.55
951 1182 9.485206 GTTCGGTGAATTAGTATATGGTATGTT 57.515 33.333 0.00 0.00 0.00 2.71
953 1184 8.862085 TCGGTGAATTAGTATATGGTATGTTGA 58.138 33.333 0.00 0.00 0.00 3.18
994 1227 1.233285 GCAGAGGCAGGTGTTCAGTG 61.233 60.000 0.00 0.00 40.72 3.66
997 1230 1.202698 AGAGGCAGGTGTTCAGTGAAC 60.203 52.381 25.99 25.99 42.26 3.18
998 1231 0.839946 AGGCAGGTGTTCAGTGAACT 59.160 50.000 30.69 13.03 42.39 3.01
1072 1305 4.245845 CCTCCTAAGGTAAGAATCGCTC 57.754 50.000 0.00 0.00 37.94 5.03
1089 1322 1.669265 GCTCATTTACAAGTACCCGCC 59.331 52.381 0.00 0.00 0.00 6.13
1116 1349 5.240891 CACTGAGATACTGCCTTCAAAGAA 58.759 41.667 0.00 0.00 0.00 2.52
1134 1368 8.641498 TCAAAGAAAGGAAGCTCTGATTTAAT 57.359 30.769 0.00 0.00 0.00 1.40
1136 1370 9.780413 CAAAGAAAGGAAGCTCTGATTTAATAC 57.220 33.333 0.00 0.00 0.00 1.89
1159 1393 3.072944 ACTTGCTGACTGCTGAGAAATC 58.927 45.455 5.87 0.00 43.37 2.17
1161 1395 0.373024 GCTGACTGCTGAGAAATCGC 59.627 55.000 0.00 0.00 38.95 4.58
1178 1412 1.523938 GCCCGACCTTCTATGGCAC 60.524 63.158 0.00 0.00 41.76 5.01
1239 1473 9.941325 AAGAAATTCATTGCCAACACAAATATA 57.059 25.926 0.00 0.00 32.27 0.86
1277 1516 2.352030 CCGTCAATGCAGCAAAGAACAT 60.352 45.455 0.00 0.00 0.00 2.71
1317 1556 7.334171 GGCCTTCAAAAATTAATATGCAGTGTT 59.666 33.333 0.00 0.00 0.00 3.32
1325 1564 3.855689 AATATGCAGTGTTGTTGCCTC 57.144 42.857 0.00 0.00 40.81 4.70
1717 1956 2.863704 GCCATGCAGGTTGAGTGTTTTC 60.864 50.000 0.00 0.00 40.61 2.29
1755 2003 3.347216 CCCACTTCCCAAAGACTGTATG 58.653 50.000 0.00 0.00 36.30 2.39
1802 2050 5.172934 TCAAACCTTTACAGGCATACTACG 58.827 41.667 0.00 0.00 45.56 3.51
1963 2213 5.832539 TCCAAGTTCCTTCTCTTCATCTT 57.167 39.130 0.00 0.00 0.00 2.40
2178 2717 3.609853 TGTTGTTATCACCATCTGGAGC 58.390 45.455 2.55 0.00 38.94 4.70
2230 2769 7.967908 AGGATAGTAGAGTTCCATTATGTTGG 58.032 38.462 0.00 0.00 38.18 3.77
2233 2772 5.431765 AGTAGAGTTCCATTATGTTGGCTG 58.568 41.667 0.00 0.00 36.66 4.85
2234 2773 4.574674 AGAGTTCCATTATGTTGGCTGA 57.425 40.909 0.00 0.00 36.66 4.26
2236 2775 4.018960 AGAGTTCCATTATGTTGGCTGAGT 60.019 41.667 0.00 0.00 36.66 3.41
2313 2854 7.605691 AGAAGATCTGTGTTAGGAAAGATGTTG 59.394 37.037 0.00 0.00 34.03 3.33
2343 2884 6.425721 ACTGCAATTTCAGAACAATCAAATGG 59.574 34.615 12.25 0.00 37.51 3.16
2354 2895 5.675684 ACAATCAAATGGTAAATGGGTCC 57.324 39.130 0.00 0.00 0.00 4.46
2359 2900 8.317679 CAATCAAATGGTAAATGGGTCCTTTTA 58.682 33.333 4.57 4.57 30.91 1.52
2397 2957 1.448893 GTAATTCACCGCCGGCTGA 60.449 57.895 25.71 19.59 0.00 4.26
2459 3019 7.111466 AGCTTGCTTATCAGAAGAAAAGATCT 58.889 34.615 0.00 0.00 41.32 2.75
2602 3162 4.645535 TCCAGCATCTGAACCTATTATGC 58.354 43.478 0.00 0.00 42.52 3.14
2829 3390 8.593945 AAAACATCATCCAGGTATTTACATGT 57.406 30.769 2.69 2.69 36.35 3.21
2977 3538 4.767928 GGTACCAATTTGGATGTGTGGTTA 59.232 41.667 22.19 0.00 40.96 2.85
2988 3549 7.800155 TGGATGTGTGGTTATACATGTATTG 57.200 36.000 22.90 0.00 38.55 1.90
3098 3659 8.749354 GGTGGATTTGGTATTTCACTTTTCTAT 58.251 33.333 0.00 0.00 0.00 1.98
3195 3756 6.741992 TGCATTGTAACACTTCTCTTATGG 57.258 37.500 0.00 0.00 0.00 2.74
3432 3995 3.058450 TGGCGCAATTTTGTCAAATCAG 58.942 40.909 10.83 0.00 30.80 2.90
3468 4031 4.153475 CCAGTCATTAAACCCAGTGTTACG 59.847 45.833 0.00 0.00 35.67 3.18
3710 4276 3.941483 AGTATGTGCTACACCATTTCTGC 59.059 43.478 0.00 0.00 32.73 4.26
3719 4285 2.158475 ACACCATTTCTGCTTCAGGGAA 60.158 45.455 0.00 0.00 31.51 3.97
3723 4289 3.129988 CCATTTCTGCTTCAGGGAATGAC 59.870 47.826 17.26 0.00 37.47 3.06
3966 4538 2.170166 GGAAACATGGACATGAAGCCA 58.830 47.619 18.38 4.32 41.20 4.75
4042 4614 6.737044 CAGTGATACTGGGACGCAGTACTG 62.737 54.167 28.60 27.42 44.05 2.74
4207 4782 5.248477 TCTGCTCTAGTGGTATGGAACTTTT 59.752 40.000 0.00 0.00 0.00 2.27
4208 4783 5.245531 TGCTCTAGTGGTATGGAACTTTTG 58.754 41.667 0.00 0.00 0.00 2.44
4245 4820 5.726793 ACTGGTCTATCTTTACCATGTTCCT 59.273 40.000 0.00 0.00 44.56 3.36
4254 4829 7.739498 TCTTTACCATGTTCCTTAGTTTGTC 57.261 36.000 0.00 0.00 0.00 3.18
4303 4881 4.451629 AACGGAAGAACACATCGTATCT 57.548 40.909 0.00 0.00 33.52 1.98
4307 4885 4.201920 CGGAAGAACACATCGTATCTCAGA 60.202 45.833 0.00 0.00 0.00 3.27
4569 5156 3.198068 CGCAGACTAATACCTTGCATGT 58.802 45.455 0.00 0.00 0.00 3.21
4640 5231 7.753580 GTGACAGTGTAGGTATTTTTATTTGGC 59.246 37.037 0.00 0.00 0.00 4.52
4680 5271 1.068472 GGCGGTCATATCTACTCCGTG 60.068 57.143 0.00 0.00 42.62 4.94
4759 5351 9.691362 GTGTCCATGTTTTCACTGTAATTTTAT 57.309 29.630 0.00 0.00 0.00 1.40
4783 5375 4.065789 GAGCAGTGTTGTAATATAGGGGC 58.934 47.826 0.00 0.00 0.00 5.80
4845 5437 1.277842 TCTGAACGTGTGGTGCCATAT 59.722 47.619 0.00 0.00 0.00 1.78
5045 5637 3.581755 TCAGTTTCCTTAACCGATGACG 58.418 45.455 0.00 0.00 37.46 4.35
5070 5662 5.862323 CCGTAAAGTCGTCTATGATATTGGG 59.138 44.000 0.00 0.00 0.00 4.12
5071 5663 6.444633 CGTAAAGTCGTCTATGATATTGGGT 58.555 40.000 0.00 0.00 0.00 4.51
5072 5664 6.921857 CGTAAAGTCGTCTATGATATTGGGTT 59.078 38.462 0.00 0.00 0.00 4.11
5073 5665 7.114529 CGTAAAGTCGTCTATGATATTGGGTTC 59.885 40.741 0.00 0.00 0.00 3.62
5074 5666 6.732896 AAGTCGTCTATGATATTGGGTTCT 57.267 37.500 0.00 0.00 0.00 3.01
5075 5667 6.732896 AGTCGTCTATGATATTGGGTTCTT 57.267 37.500 0.00 0.00 0.00 2.52
5076 5668 7.125792 AGTCGTCTATGATATTGGGTTCTTT 57.874 36.000 0.00 0.00 0.00 2.52
5077 5669 8.246430 AGTCGTCTATGATATTGGGTTCTTTA 57.754 34.615 0.00 0.00 0.00 1.85
5078 5670 8.701895 AGTCGTCTATGATATTGGGTTCTTTAA 58.298 33.333 0.00 0.00 0.00 1.52
5079 5671 8.762426 GTCGTCTATGATATTGGGTTCTTTAAC 58.238 37.037 0.00 0.00 34.66 2.01
5090 5682 4.663636 GGTTCTTTAACCGATGACACTG 57.336 45.455 0.00 0.00 45.61 3.66
5091 5683 4.062991 GGTTCTTTAACCGATGACACTGT 58.937 43.478 0.00 0.00 45.61 3.55
5092 5684 5.232463 GGTTCTTTAACCGATGACACTGTA 58.768 41.667 0.00 0.00 45.61 2.74
5093 5685 5.697633 GGTTCTTTAACCGATGACACTGTAA 59.302 40.000 0.00 0.00 45.61 2.41
5094 5686 6.203338 GGTTCTTTAACCGATGACACTGTAAA 59.797 38.462 0.00 0.00 45.61 2.01
5095 5687 7.288672 GTTCTTTAACCGATGACACTGTAAAG 58.711 38.462 0.00 0.00 0.00 1.85
5096 5688 6.518493 TCTTTAACCGATGACACTGTAAAGT 58.482 36.000 0.00 0.00 0.00 2.66
5097 5689 6.987992 TCTTTAACCGATGACACTGTAAAGTT 59.012 34.615 0.00 0.00 0.00 2.66
5098 5690 6.533819 TTAACCGATGACACTGTAAAGTTG 57.466 37.500 0.00 0.00 0.00 3.16
5099 5691 4.067972 ACCGATGACACTGTAAAGTTGT 57.932 40.909 0.00 0.00 0.00 3.32
5152 5744 2.780010 CTGGTCAATATGGGGGAAGACT 59.220 50.000 0.00 0.00 0.00 3.24
5154 5746 2.509964 GGTCAATATGGGGGAAGACTGT 59.490 50.000 0.00 0.00 0.00 3.55
5167 5759 1.675641 GACTGTTGCATTCCCGGCT 60.676 57.895 0.00 0.00 0.00 5.52
5168 5760 1.228552 ACTGTTGCATTCCCGGCTT 60.229 52.632 0.00 0.00 0.00 4.35
5186 5778 3.562176 GGCTTCCCAAATCTTTCAGAGGA 60.562 47.826 0.00 0.00 0.00 3.71
5198 5790 4.021925 AGAGGACAAGGCGCCACC 62.022 66.667 31.54 24.18 39.61 4.61
5199 5791 4.329545 GAGGACAAGGCGCCACCA 62.330 66.667 31.54 0.00 43.14 4.17
5200 5792 4.643387 AGGACAAGGCGCCACCAC 62.643 66.667 31.54 16.69 43.14 4.16
5201 5793 4.947147 GGACAAGGCGCCACCACA 62.947 66.667 31.54 0.00 43.14 4.17
5202 5794 2.672996 GACAAGGCGCCACCACAT 60.673 61.111 31.54 2.66 43.14 3.21
5203 5795 2.672996 ACAAGGCGCCACCACATC 60.673 61.111 31.54 0.00 43.14 3.06
5204 5796 2.360350 CAAGGCGCCACCACATCT 60.360 61.111 31.54 0.76 43.14 2.90
5205 5797 1.973281 CAAGGCGCCACCACATCTT 60.973 57.895 31.54 8.56 43.14 2.40
5206 5798 1.228552 AAGGCGCCACCACATCTTT 60.229 52.632 31.54 7.70 43.14 2.52
5207 5799 1.244019 AAGGCGCCACCACATCTTTC 61.244 55.000 31.54 0.00 43.14 2.62
5208 5800 1.971167 GGCGCCACCACATCTTTCA 60.971 57.895 24.80 0.00 38.86 2.69
5209 5801 1.503542 GCGCCACCACATCTTTCAG 59.496 57.895 0.00 0.00 0.00 3.02
5210 5802 0.955428 GCGCCACCACATCTTTCAGA 60.955 55.000 0.00 0.00 0.00 3.27
5211 5803 1.081892 CGCCACCACATCTTTCAGAG 58.918 55.000 0.00 0.00 0.00 3.35
5212 5804 1.457346 GCCACCACATCTTTCAGAGG 58.543 55.000 0.00 0.00 31.33 3.69
5213 5805 1.952367 GCCACCACATCTTTCAGAGGG 60.952 57.143 0.00 0.00 28.79 4.30
5214 5806 1.457346 CACCACATCTTTCAGAGGGC 58.543 55.000 0.00 0.00 28.79 5.19
5215 5807 1.067295 ACCACATCTTTCAGAGGGCA 58.933 50.000 0.00 0.00 28.79 5.36
5216 5808 1.425066 ACCACATCTTTCAGAGGGCAA 59.575 47.619 0.00 0.00 28.79 4.52
5217 5809 2.089980 CCACATCTTTCAGAGGGCAAG 58.910 52.381 0.00 0.00 28.79 4.01
5218 5810 2.089980 CACATCTTTCAGAGGGCAAGG 58.910 52.381 0.00 0.00 28.79 3.61
5219 5811 1.101331 CATCTTTCAGAGGGCAAGGC 58.899 55.000 0.00 0.00 0.00 4.35
5220 5812 0.393537 ATCTTTCAGAGGGCAAGGCG 60.394 55.000 0.00 0.00 0.00 5.52
5221 5813 2.672996 TTTCAGAGGGCAAGGCGC 60.673 61.111 0.00 0.00 41.91 6.53
5230 5822 4.496927 GCAAGGCGCCCCATTTCG 62.497 66.667 26.15 6.99 32.94 3.46
5231 5823 3.061848 CAAGGCGCCCCATTTCGT 61.062 61.111 26.15 0.00 0.00 3.85
5232 5824 3.061848 AAGGCGCCCCATTTCGTG 61.062 61.111 26.15 0.00 0.00 4.35
5233 5825 3.561120 AAGGCGCCCCATTTCGTGA 62.561 57.895 26.15 0.00 0.00 4.35
5234 5826 2.828549 GGCGCCCCATTTCGTGAT 60.829 61.111 18.11 0.00 0.00 3.06
5235 5827 2.408835 GCGCCCCATTTCGTGATG 59.591 61.111 0.00 0.00 0.00 3.07
5236 5828 2.408835 CGCCCCATTTCGTGATGC 59.591 61.111 0.00 0.00 0.00 3.91
5237 5829 2.114670 CGCCCCATTTCGTGATGCT 61.115 57.895 0.00 0.00 0.00 3.79
5238 5830 1.434696 GCCCCATTTCGTGATGCTG 59.565 57.895 0.00 0.00 0.00 4.41
5239 5831 2.008268 GCCCCATTTCGTGATGCTGG 62.008 60.000 0.00 0.00 0.00 4.85
5240 5832 1.434696 CCCATTTCGTGATGCTGGC 59.565 57.895 0.00 0.00 0.00 4.85
5241 5833 1.314534 CCCATTTCGTGATGCTGGCA 61.315 55.000 0.00 0.00 0.00 4.92
5242 5834 0.742505 CCATTTCGTGATGCTGGCAT 59.257 50.000 7.86 7.86 39.69 4.40
5249 5841 4.040068 GATGCTGGCATCGGAGTC 57.960 61.111 17.89 0.00 42.55 3.36
5250 5842 1.144716 GATGCTGGCATCGGAGTCA 59.855 57.895 17.89 0.00 42.55 3.41
5251 5843 0.462581 GATGCTGGCATCGGAGTCAA 60.463 55.000 17.89 0.00 42.55 3.18
5252 5844 0.182061 ATGCTGGCATCGGAGTCAAT 59.818 50.000 1.86 0.00 29.42 2.57
5253 5845 0.745486 TGCTGGCATCGGAGTCAATG 60.745 55.000 0.00 0.00 0.00 2.82
5254 5846 0.462581 GCTGGCATCGGAGTCAATGA 60.463 55.000 8.50 0.00 0.00 2.57
5255 5847 1.813092 GCTGGCATCGGAGTCAATGAT 60.813 52.381 8.50 0.00 0.00 2.45
5256 5848 2.548707 GCTGGCATCGGAGTCAATGATA 60.549 50.000 8.50 0.00 0.00 2.15
5257 5849 3.867600 GCTGGCATCGGAGTCAATGATAT 60.868 47.826 8.50 0.00 0.00 1.63
5258 5850 3.667360 TGGCATCGGAGTCAATGATATG 58.333 45.455 8.50 0.00 0.00 1.78
5259 5851 2.417933 GGCATCGGAGTCAATGATATGC 59.582 50.000 8.50 0.00 37.97 3.14
5260 5852 3.332919 GCATCGGAGTCAATGATATGCT 58.667 45.455 8.50 0.00 36.27 3.79
5261 5853 3.750130 GCATCGGAGTCAATGATATGCTT 59.250 43.478 8.50 0.00 36.27 3.91
5262 5854 4.378149 GCATCGGAGTCAATGATATGCTTG 60.378 45.833 8.50 0.00 36.27 4.01
5263 5855 4.406648 TCGGAGTCAATGATATGCTTGT 57.593 40.909 0.00 0.00 0.00 3.16
5264 5856 4.122046 TCGGAGTCAATGATATGCTTGTG 58.878 43.478 0.00 0.00 0.00 3.33
5265 5857 4.122046 CGGAGTCAATGATATGCTTGTGA 58.878 43.478 0.00 0.00 0.00 3.58
5266 5858 4.571984 CGGAGTCAATGATATGCTTGTGAA 59.428 41.667 0.00 0.00 0.00 3.18
5267 5859 5.277202 CGGAGTCAATGATATGCTTGTGAAG 60.277 44.000 0.00 0.00 0.00 3.02
5268 5860 5.587844 GGAGTCAATGATATGCTTGTGAAGT 59.412 40.000 0.00 0.00 0.00 3.01
5269 5861 6.094603 GGAGTCAATGATATGCTTGTGAAGTT 59.905 38.462 0.00 0.00 0.00 2.66
5270 5862 6.849502 AGTCAATGATATGCTTGTGAAGTTG 58.150 36.000 0.00 0.00 0.00 3.16
5271 5863 6.432162 AGTCAATGATATGCTTGTGAAGTTGT 59.568 34.615 0.00 0.00 0.00 3.32
5272 5864 7.607607 AGTCAATGATATGCTTGTGAAGTTGTA 59.392 33.333 0.00 0.00 0.00 2.41
5273 5865 8.236586 GTCAATGATATGCTTGTGAAGTTGTAA 58.763 33.333 0.00 0.00 0.00 2.41
5274 5866 8.959548 TCAATGATATGCTTGTGAAGTTGTAAT 58.040 29.630 0.00 0.00 0.00 1.89
5275 5867 9.016623 CAATGATATGCTTGTGAAGTTGTAATG 57.983 33.333 0.00 0.00 0.00 1.90
5276 5868 7.920160 TGATATGCTTGTGAAGTTGTAATGA 57.080 32.000 0.00 0.00 0.00 2.57
5277 5869 8.334263 TGATATGCTTGTGAAGTTGTAATGAA 57.666 30.769 0.00 0.00 0.00 2.57
5278 5870 8.453320 TGATATGCTTGTGAAGTTGTAATGAAG 58.547 33.333 0.00 0.00 0.00 3.02
5279 5871 5.437289 TGCTTGTGAAGTTGTAATGAAGG 57.563 39.130 0.00 0.00 0.00 3.46
5280 5872 4.887071 TGCTTGTGAAGTTGTAATGAAGGT 59.113 37.500 0.00 0.00 0.00 3.50
5281 5873 5.359576 TGCTTGTGAAGTTGTAATGAAGGTT 59.640 36.000 0.00 0.00 0.00 3.50
5282 5874 5.687285 GCTTGTGAAGTTGTAATGAAGGTTG 59.313 40.000 0.00 0.00 0.00 3.77
5283 5875 6.459573 GCTTGTGAAGTTGTAATGAAGGTTGA 60.460 38.462 0.00 0.00 0.00 3.18
5284 5876 6.618287 TGTGAAGTTGTAATGAAGGTTGAG 57.382 37.500 0.00 0.00 0.00 3.02
5285 5877 5.008613 TGTGAAGTTGTAATGAAGGTTGAGC 59.991 40.000 0.00 0.00 0.00 4.26
5286 5878 4.518970 TGAAGTTGTAATGAAGGTTGAGCC 59.481 41.667 0.00 0.00 37.58 4.70
5287 5879 4.098914 AGTTGTAATGAAGGTTGAGCCA 57.901 40.909 0.00 0.00 40.61 4.75
5288 5880 4.469657 AGTTGTAATGAAGGTTGAGCCAA 58.530 39.130 0.00 0.00 40.61 4.52
5289 5881 4.278419 AGTTGTAATGAAGGTTGAGCCAAC 59.722 41.667 8.94 8.94 42.89 3.77
5290 5882 4.098914 TGTAATGAAGGTTGAGCCAACT 57.901 40.909 14.91 0.36 43.14 3.16
5291 5883 3.820467 TGTAATGAAGGTTGAGCCAACTG 59.180 43.478 14.91 0.00 43.14 3.16
5292 5884 2.664402 ATGAAGGTTGAGCCAACTGT 57.336 45.000 14.91 6.08 43.14 3.55
5293 5885 1.967319 TGAAGGTTGAGCCAACTGTC 58.033 50.000 14.91 12.78 43.14 3.51
5294 5886 0.868406 GAAGGTTGAGCCAACTGTCG 59.132 55.000 14.91 0.00 43.14 4.35
5295 5887 0.468226 AAGGTTGAGCCAACTGTCGA 59.532 50.000 14.91 0.00 43.14 4.20
5296 5888 0.249911 AGGTTGAGCCAACTGTCGAC 60.250 55.000 9.11 9.11 43.14 4.20
5297 5889 1.228657 GGTTGAGCCAACTGTCGACC 61.229 60.000 14.12 5.30 43.14 4.79
5298 5890 0.249911 GTTGAGCCAACTGTCGACCT 60.250 55.000 14.12 0.65 40.73 3.85
5299 5891 0.468226 TTGAGCCAACTGTCGACCTT 59.532 50.000 14.12 1.03 0.00 3.50
5300 5892 0.249868 TGAGCCAACTGTCGACCTTG 60.250 55.000 14.12 13.80 0.00 3.61
5301 5893 0.249911 GAGCCAACTGTCGACCTTGT 60.250 55.000 14.12 6.62 0.00 3.16
5302 5894 0.180406 AGCCAACTGTCGACCTTGTT 59.820 50.000 14.12 12.38 0.00 2.83
5303 5895 0.307760 GCCAACTGTCGACCTTGTTG 59.692 55.000 25.67 25.67 39.35 3.33
5305 5897 0.944386 CAACTGTCGACCTTGTTGGG 59.056 55.000 25.26 11.14 41.11 4.12
5306 5898 0.834612 AACTGTCGACCTTGTTGGGA 59.165 50.000 14.12 0.00 41.11 4.37
5307 5899 0.834612 ACTGTCGACCTTGTTGGGAA 59.165 50.000 14.12 0.00 41.11 3.97
5308 5900 1.226746 CTGTCGACCTTGTTGGGAAC 58.773 55.000 14.12 0.00 41.11 3.62
5328 5920 7.845066 GGAACCTCCCGAATATTATCATTAC 57.155 40.000 0.00 0.00 0.00 1.89
5329 5921 6.534079 GGAACCTCCCGAATATTATCATTACG 59.466 42.308 0.00 0.00 0.00 3.18
5330 5922 5.974108 ACCTCCCGAATATTATCATTACGG 58.026 41.667 0.00 0.00 38.83 4.02
5331 5923 4.809426 CCTCCCGAATATTATCATTACGGC 59.191 45.833 0.00 0.00 37.98 5.68
5332 5924 5.395324 CCTCCCGAATATTATCATTACGGCT 60.395 44.000 0.00 0.00 37.98 5.52
5333 5925 5.657474 TCCCGAATATTATCATTACGGCTC 58.343 41.667 0.00 0.00 37.98 4.70
5334 5926 4.503007 CCCGAATATTATCATTACGGCTCG 59.497 45.833 0.00 0.00 37.98 5.03
5335 5927 4.503007 CCGAATATTATCATTACGGCTCGG 59.497 45.833 0.00 0.00 33.03 4.63
5336 5928 5.100259 CGAATATTATCATTACGGCTCGGT 58.900 41.667 0.00 0.00 0.00 4.69
5337 5929 5.575606 CGAATATTATCATTACGGCTCGGTT 59.424 40.000 0.00 0.00 0.00 4.44
5338 5930 6.748658 CGAATATTATCATTACGGCTCGGTTA 59.251 38.462 0.00 0.00 0.00 2.85
5339 5931 7.274033 CGAATATTATCATTACGGCTCGGTTAA 59.726 37.037 0.00 0.00 0.00 2.01
5340 5932 8.475331 AATATTATCATTACGGCTCGGTTAAG 57.525 34.615 0.00 0.00 0.00 1.85
5341 5933 2.589798 TCATTACGGCTCGGTTAAGG 57.410 50.000 0.00 0.00 0.00 2.69
5342 5934 2.101783 TCATTACGGCTCGGTTAAGGA 58.898 47.619 0.00 0.00 0.00 3.36
5343 5935 2.100252 TCATTACGGCTCGGTTAAGGAG 59.900 50.000 0.00 0.13 34.62 3.69
5344 5936 1.838112 TTACGGCTCGGTTAAGGAGA 58.162 50.000 7.48 0.00 33.27 3.71
5345 5937 2.062971 TACGGCTCGGTTAAGGAGAT 57.937 50.000 7.48 0.00 33.27 2.75
5346 5938 0.745468 ACGGCTCGGTTAAGGAGATC 59.255 55.000 7.48 0.00 33.27 2.75
5347 5939 0.744874 CGGCTCGGTTAAGGAGATCA 59.255 55.000 7.48 0.00 33.27 2.92
5348 5940 1.341531 CGGCTCGGTTAAGGAGATCAT 59.658 52.381 7.48 0.00 33.27 2.45
5349 5941 2.557056 CGGCTCGGTTAAGGAGATCATA 59.443 50.000 7.48 0.00 33.27 2.15
5350 5942 3.005472 CGGCTCGGTTAAGGAGATCATAA 59.995 47.826 7.48 0.00 33.27 1.90
5351 5943 4.322049 CGGCTCGGTTAAGGAGATCATAAT 60.322 45.833 7.48 0.00 33.27 1.28
5352 5944 4.932200 GGCTCGGTTAAGGAGATCATAATG 59.068 45.833 7.48 0.00 33.27 1.90
5353 5945 5.279506 GGCTCGGTTAAGGAGATCATAATGA 60.280 44.000 7.48 0.00 33.27 2.57
5354 5946 5.635700 GCTCGGTTAAGGAGATCATAATGAC 59.364 44.000 7.48 0.00 33.27 3.06
5355 5947 6.097915 TCGGTTAAGGAGATCATAATGACC 57.902 41.667 0.00 0.00 0.00 4.02
5356 5948 5.011738 TCGGTTAAGGAGATCATAATGACCC 59.988 44.000 0.00 0.00 0.00 4.46
5357 5949 5.561679 GGTTAAGGAGATCATAATGACCCC 58.438 45.833 0.00 0.00 0.00 4.95
5358 5950 5.073144 GGTTAAGGAGATCATAATGACCCCA 59.927 44.000 0.00 0.00 0.00 4.96
5359 5951 6.240292 GGTTAAGGAGATCATAATGACCCCAT 60.240 42.308 0.00 0.00 33.66 4.00
5360 5952 5.937492 AAGGAGATCATAATGACCCCATT 57.063 39.130 0.00 0.00 44.56 3.16
5361 5953 5.252586 AGGAGATCATAATGACCCCATTG 57.747 43.478 0.00 0.00 42.55 2.82
5362 5954 4.915809 AGGAGATCATAATGACCCCATTGA 59.084 41.667 0.00 0.00 42.55 2.57
5363 5955 5.373555 AGGAGATCATAATGACCCCATTGAA 59.626 40.000 0.00 0.00 42.55 2.69
5364 5956 6.046405 AGGAGATCATAATGACCCCATTGAAT 59.954 38.462 0.00 0.00 42.55 2.57
5365 5957 6.376581 GGAGATCATAATGACCCCATTGAATC 59.623 42.308 0.00 0.00 42.55 2.52
5366 5958 6.855667 AGATCATAATGACCCCATTGAATCA 58.144 36.000 0.00 0.00 42.55 2.57
5367 5959 7.299896 AGATCATAATGACCCCATTGAATCAA 58.700 34.615 0.00 0.00 42.55 2.57
5368 5960 6.964807 TCATAATGACCCCATTGAATCAAG 57.035 37.500 1.10 0.00 42.55 3.02
5369 5961 6.671605 TCATAATGACCCCATTGAATCAAGA 58.328 36.000 1.10 0.00 42.55 3.02
5370 5962 7.124721 TCATAATGACCCCATTGAATCAAGAA 58.875 34.615 1.10 0.00 42.55 2.52
5371 5963 7.785985 TCATAATGACCCCATTGAATCAAGAAT 59.214 33.333 1.10 0.00 42.55 2.40
5372 5964 6.475596 AATGACCCCATTGAATCAAGAATC 57.524 37.500 1.10 0.00 41.18 2.52
5373 5965 4.280819 TGACCCCATTGAATCAAGAATCC 58.719 43.478 1.10 0.00 0.00 3.01
5374 5966 3.290710 ACCCCATTGAATCAAGAATCCG 58.709 45.455 1.10 0.00 0.00 4.18
5375 5967 2.624838 CCCCATTGAATCAAGAATCCGG 59.375 50.000 1.10 0.00 0.00 5.14
5376 5968 2.035066 CCCATTGAATCAAGAATCCGGC 59.965 50.000 1.10 0.00 0.00 6.13
5377 5969 2.689471 CCATTGAATCAAGAATCCGGCA 59.311 45.455 1.10 0.00 0.00 5.69
5378 5970 3.130869 CCATTGAATCAAGAATCCGGCAA 59.869 43.478 1.10 0.00 0.00 4.52
5379 5971 3.848272 TTGAATCAAGAATCCGGCAAC 57.152 42.857 0.00 0.00 0.00 4.17
5380 5972 2.789213 TGAATCAAGAATCCGGCAACA 58.211 42.857 0.00 0.00 0.00 3.33
5381 5973 3.153130 TGAATCAAGAATCCGGCAACAA 58.847 40.909 0.00 0.00 0.00 2.83
5382 5974 3.571828 TGAATCAAGAATCCGGCAACAAA 59.428 39.130 0.00 0.00 0.00 2.83
5383 5975 3.855689 ATCAAGAATCCGGCAACAAAG 57.144 42.857 0.00 0.00 0.00 2.77
5384 5976 2.857483 TCAAGAATCCGGCAACAAAGA 58.143 42.857 0.00 0.00 0.00 2.52
5385 5977 2.552315 TCAAGAATCCGGCAACAAAGAC 59.448 45.455 0.00 0.00 0.00 3.01
5386 5978 1.156736 AGAATCCGGCAACAAAGACG 58.843 50.000 0.00 0.00 0.00 4.18
5387 5979 1.153353 GAATCCGGCAACAAAGACGA 58.847 50.000 0.00 0.00 0.00 4.20
5388 5980 0.872388 AATCCGGCAACAAAGACGAC 59.128 50.000 0.00 0.00 0.00 4.34
5389 5981 0.250124 ATCCGGCAACAAAGACGACA 60.250 50.000 0.00 0.00 0.00 4.35
5390 5982 0.250124 TCCGGCAACAAAGACGACAT 60.250 50.000 0.00 0.00 0.00 3.06
5391 5983 0.110238 CCGGCAACAAAGACGACATG 60.110 55.000 0.00 0.00 0.00 3.21
5392 5984 0.110238 CGGCAACAAAGACGACATGG 60.110 55.000 0.00 0.00 0.00 3.66
5393 5985 1.234821 GGCAACAAAGACGACATGGA 58.765 50.000 0.00 0.00 0.00 3.41
5394 5986 1.069227 GGCAACAAAGACGACATGGAC 60.069 52.381 0.00 0.00 0.00 4.02
5395 5987 1.873591 GCAACAAAGACGACATGGACT 59.126 47.619 0.00 0.00 0.00 3.85
5396 5988 2.349817 GCAACAAAGACGACATGGACTG 60.350 50.000 0.00 0.00 0.00 3.51
5397 5989 1.512926 ACAAAGACGACATGGACTGC 58.487 50.000 0.00 0.00 0.00 4.40
5398 5990 1.202639 ACAAAGACGACATGGACTGCA 60.203 47.619 0.00 0.00 0.00 4.41
5399 5991 1.872952 CAAAGACGACATGGACTGCAA 59.127 47.619 0.00 0.00 0.00 4.08
5400 5992 1.800805 AAGACGACATGGACTGCAAG 58.199 50.000 0.00 0.00 42.29 4.01
5417 6009 3.070429 CAAGTCTGCAACTCCAAACAC 57.930 47.619 2.65 0.00 37.17 3.32
5418 6010 2.418368 AGTCTGCAACTCCAAACACA 57.582 45.000 0.00 0.00 30.02 3.72
5419 6011 2.017049 AGTCTGCAACTCCAAACACAC 58.983 47.619 0.00 0.00 30.02 3.82
5420 6012 1.742831 GTCTGCAACTCCAAACACACA 59.257 47.619 0.00 0.00 0.00 3.72
5421 6013 2.163412 GTCTGCAACTCCAAACACACAA 59.837 45.455 0.00 0.00 0.00 3.33
5422 6014 2.163412 TCTGCAACTCCAAACACACAAC 59.837 45.455 0.00 0.00 0.00 3.32
5423 6015 1.889170 TGCAACTCCAAACACACAACA 59.111 42.857 0.00 0.00 0.00 3.33
5424 6016 2.495270 TGCAACTCCAAACACACAACAT 59.505 40.909 0.00 0.00 0.00 2.71
5425 6017 2.859538 GCAACTCCAAACACACAACATG 59.140 45.455 0.00 0.00 0.00 3.21
5426 6018 3.446799 CAACTCCAAACACACAACATGG 58.553 45.455 0.00 0.00 0.00 3.66
5427 6019 2.031120 ACTCCAAACACACAACATGGG 58.969 47.619 0.00 0.00 37.93 4.00
5428 6020 2.305928 CTCCAAACACACAACATGGGA 58.694 47.619 0.00 0.00 34.14 4.37
5429 6021 2.892852 CTCCAAACACACAACATGGGAT 59.107 45.455 0.00 0.00 34.14 3.85
5430 6022 2.627221 TCCAAACACACAACATGGGATG 59.373 45.455 0.00 0.00 34.14 3.51
5431 6023 2.288948 CCAAACACACAACATGGGATGG 60.289 50.000 0.00 0.00 36.40 3.51
5432 6024 1.631405 AACACACAACATGGGATGGG 58.369 50.000 0.00 0.00 34.14 4.00
5433 6025 0.899717 ACACACAACATGGGATGGGC 60.900 55.000 0.00 0.00 34.14 5.36
5434 6026 1.678635 ACACAACATGGGATGGGCG 60.679 57.895 0.00 0.00 33.60 6.13
5435 6027 1.378382 CACAACATGGGATGGGCGA 60.378 57.895 0.00 0.00 33.60 5.54
5436 6028 0.752743 CACAACATGGGATGGGCGAT 60.753 55.000 0.00 0.00 33.60 4.58
5437 6029 0.033208 ACAACATGGGATGGGCGATT 60.033 50.000 0.00 0.00 33.60 3.34
5438 6030 1.214175 ACAACATGGGATGGGCGATTA 59.786 47.619 0.00 0.00 33.60 1.75
5439 6031 1.608590 CAACATGGGATGGGCGATTAC 59.391 52.381 0.00 0.00 33.60 1.89
5440 6032 0.250295 ACATGGGATGGGCGATTACG 60.250 55.000 0.00 0.00 37.28 3.18
5441 6033 0.250295 CATGGGATGGGCGATTACGT 60.250 55.000 0.00 0.00 41.98 3.57
5442 6034 1.001520 CATGGGATGGGCGATTACGTA 59.998 52.381 0.00 0.00 41.98 3.57
5443 6035 1.344065 TGGGATGGGCGATTACGTAT 58.656 50.000 0.00 0.00 41.98 3.06
5444 6036 1.001520 TGGGATGGGCGATTACGTATG 59.998 52.381 0.00 0.00 41.98 2.39
5445 6037 1.001633 GGGATGGGCGATTACGTATGT 59.998 52.381 0.00 0.00 41.98 2.29
5446 6038 2.549349 GGGATGGGCGATTACGTATGTT 60.549 50.000 0.00 0.00 41.98 2.71
5447 6039 3.306225 GGGATGGGCGATTACGTATGTTA 60.306 47.826 0.00 0.00 41.98 2.41
5448 6040 3.924686 GGATGGGCGATTACGTATGTTAG 59.075 47.826 0.00 0.00 41.98 2.34
5449 6041 4.321452 GGATGGGCGATTACGTATGTTAGA 60.321 45.833 0.00 0.00 41.98 2.10
5450 6042 4.652421 TGGGCGATTACGTATGTTAGAA 57.348 40.909 0.00 0.00 41.98 2.10
5451 6043 5.008619 TGGGCGATTACGTATGTTAGAAA 57.991 39.130 0.00 0.00 41.98 2.52
5452 6044 5.603596 TGGGCGATTACGTATGTTAGAAAT 58.396 37.500 0.00 0.00 41.98 2.17
5453 6045 6.050432 TGGGCGATTACGTATGTTAGAAATT 58.950 36.000 0.00 0.00 41.98 1.82
5454 6046 7.208777 TGGGCGATTACGTATGTTAGAAATTA 58.791 34.615 0.00 0.00 41.98 1.40
5455 6047 7.169645 TGGGCGATTACGTATGTTAGAAATTAC 59.830 37.037 0.00 0.00 41.98 1.89
5456 6048 7.169645 GGGCGATTACGTATGTTAGAAATTACA 59.830 37.037 0.00 0.00 41.98 2.41
5457 6049 8.000435 GGCGATTACGTATGTTAGAAATTACAC 59.000 37.037 0.00 0.00 41.98 2.90
5458 6050 8.000435 GCGATTACGTATGTTAGAAATTACACC 59.000 37.037 0.00 0.00 41.98 4.16
5459 6051 8.203346 CGATTACGTATGTTAGAAATTACACCG 58.797 37.037 0.00 0.00 34.56 4.94
5460 6052 8.931385 ATTACGTATGTTAGAAATTACACCGT 57.069 30.769 0.00 9.31 38.19 4.83
5461 6053 8.755696 TTACGTATGTTAGAAATTACACCGTT 57.244 30.769 0.00 0.00 36.87 4.44
5462 6054 7.656707 ACGTATGTTAGAAATTACACCGTTT 57.343 32.000 0.00 0.00 33.90 3.60
5463 6055 7.732664 ACGTATGTTAGAAATTACACCGTTTC 58.267 34.615 0.00 0.00 33.90 2.78
5464 6056 7.599998 ACGTATGTTAGAAATTACACCGTTTCT 59.400 33.333 5.77 5.77 44.42 2.52
5465 6057 8.106348 CGTATGTTAGAAATTACACCGTTTCTC 58.894 37.037 3.87 0.00 42.11 2.87
5466 6058 7.972832 ATGTTAGAAATTACACCGTTTCTCA 57.027 32.000 3.87 0.00 42.11 3.27
5467 6059 7.181143 TGTTAGAAATTACACCGTTTCTCAC 57.819 36.000 3.87 4.86 42.11 3.51
5468 6060 6.203338 TGTTAGAAATTACACCGTTTCTCACC 59.797 38.462 3.87 0.00 42.11 4.02
5469 6061 4.710324 AGAAATTACACCGTTTCTCACCA 58.290 39.130 0.00 0.00 39.75 4.17
5470 6062 5.313712 AGAAATTACACCGTTTCTCACCAT 58.686 37.500 0.00 0.00 39.75 3.55
5471 6063 6.469410 AGAAATTACACCGTTTCTCACCATA 58.531 36.000 0.00 0.00 39.75 2.74
5472 6064 6.594159 AGAAATTACACCGTTTCTCACCATAG 59.406 38.462 0.00 0.00 39.75 2.23
5473 6065 5.670792 ATTACACCGTTTCTCACCATAGA 57.329 39.130 0.00 0.00 0.00 1.98
5474 6066 5.670792 TTACACCGTTTCTCACCATAGAT 57.329 39.130 0.00 0.00 0.00 1.98
5475 6067 3.861840 ACACCGTTTCTCACCATAGATG 58.138 45.455 0.00 0.00 0.00 2.90
5476 6068 3.513912 ACACCGTTTCTCACCATAGATGA 59.486 43.478 0.00 0.00 0.00 2.92
5477 6069 4.115516 CACCGTTTCTCACCATAGATGAG 58.884 47.826 0.00 0.00 44.22 2.90
5487 6079 7.171653 TCTCACCATAGATGAGACTAGTATGG 58.828 42.308 14.42 14.42 46.01 2.74
5488 6080 6.853490 TCACCATAGATGAGACTAGTATGGT 58.147 40.000 15.50 15.50 35.16 3.55
5489 6081 7.985589 TCACCATAGATGAGACTAGTATGGTA 58.014 38.462 19.17 9.10 33.93 3.25
5490 6082 8.103935 TCACCATAGATGAGACTAGTATGGTAG 58.896 40.741 19.17 14.68 33.93 3.18
5491 6083 7.338196 CACCATAGATGAGACTAGTATGGTAGG 59.662 44.444 19.17 8.53 33.93 3.18
5492 6084 7.018751 ACCATAGATGAGACTAGTATGGTAGGT 59.981 40.741 18.48 6.87 33.93 3.08
5493 6085 7.891183 CCATAGATGAGACTAGTATGGTAGGTT 59.109 40.741 9.53 0.00 0.00 3.50
5494 6086 8.952278 CATAGATGAGACTAGTATGGTAGGTTC 58.048 40.741 0.00 0.00 0.00 3.62
5495 6087 6.912426 AGATGAGACTAGTATGGTAGGTTCA 58.088 40.000 0.00 0.00 0.00 3.18
5496 6088 7.355101 AGATGAGACTAGTATGGTAGGTTCAA 58.645 38.462 0.00 0.00 0.00 2.69
5497 6089 8.007742 AGATGAGACTAGTATGGTAGGTTCAAT 58.992 37.037 0.00 0.00 0.00 2.57
5498 6090 7.348080 TGAGACTAGTATGGTAGGTTCAATG 57.652 40.000 0.00 0.00 0.00 2.82
5499 6091 6.323996 TGAGACTAGTATGGTAGGTTCAATGG 59.676 42.308 0.00 0.00 0.00 3.16
5500 6092 6.441222 AGACTAGTATGGTAGGTTCAATGGA 58.559 40.000 0.00 0.00 0.00 3.41
5501 6093 6.551601 AGACTAGTATGGTAGGTTCAATGGAG 59.448 42.308 0.00 0.00 0.00 3.86
5502 6094 6.203072 ACTAGTATGGTAGGTTCAATGGAGT 58.797 40.000 0.00 0.00 0.00 3.85
5503 6095 5.359194 AGTATGGTAGGTTCAATGGAGTG 57.641 43.478 0.00 0.00 0.00 3.51
5504 6096 4.783227 AGTATGGTAGGTTCAATGGAGTGT 59.217 41.667 0.00 0.00 0.00 3.55
5505 6097 3.417069 TGGTAGGTTCAATGGAGTGTG 57.583 47.619 0.00 0.00 0.00 3.82
5506 6098 2.976185 TGGTAGGTTCAATGGAGTGTGA 59.024 45.455 0.00 0.00 0.00 3.58
5507 6099 3.007940 TGGTAGGTTCAATGGAGTGTGAG 59.992 47.826 0.00 0.00 0.00 3.51
5508 6100 2.867109 AGGTTCAATGGAGTGTGAGG 57.133 50.000 0.00 0.00 0.00 3.86
5509 6101 1.352352 AGGTTCAATGGAGTGTGAGGG 59.648 52.381 0.00 0.00 0.00 4.30
5510 6102 1.073923 GGTTCAATGGAGTGTGAGGGT 59.926 52.381 0.00 0.00 0.00 4.34
5511 6103 2.304761 GGTTCAATGGAGTGTGAGGGTA 59.695 50.000 0.00 0.00 0.00 3.69
5512 6104 3.600388 GTTCAATGGAGTGTGAGGGTAG 58.400 50.000 0.00 0.00 0.00 3.18
5513 6105 2.187958 TCAATGGAGTGTGAGGGTAGG 58.812 52.381 0.00 0.00 0.00 3.18
5514 6106 1.909302 CAATGGAGTGTGAGGGTAGGT 59.091 52.381 0.00 0.00 0.00 3.08
5515 6107 2.305927 CAATGGAGTGTGAGGGTAGGTT 59.694 50.000 0.00 0.00 0.00 3.50
5516 6108 1.348064 TGGAGTGTGAGGGTAGGTTG 58.652 55.000 0.00 0.00 0.00 3.77
5517 6109 1.349067 GGAGTGTGAGGGTAGGTTGT 58.651 55.000 0.00 0.00 0.00 3.32
5518 6110 1.275573 GGAGTGTGAGGGTAGGTTGTC 59.724 57.143 0.00 0.00 0.00 3.18
5519 6111 2.249139 GAGTGTGAGGGTAGGTTGTCT 58.751 52.381 0.00 0.00 0.00 3.41
5520 6112 2.633481 GAGTGTGAGGGTAGGTTGTCTT 59.367 50.000 0.00 0.00 0.00 3.01
5521 6113 2.633481 AGTGTGAGGGTAGGTTGTCTTC 59.367 50.000 0.00 0.00 0.00 2.87
5522 6114 2.633481 GTGTGAGGGTAGGTTGTCTTCT 59.367 50.000 0.00 0.00 0.00 2.85
5523 6115 3.071167 GTGTGAGGGTAGGTTGTCTTCTT 59.929 47.826 0.00 0.00 0.00 2.52
5524 6116 3.714798 TGTGAGGGTAGGTTGTCTTCTTT 59.285 43.478 0.00 0.00 0.00 2.52
5525 6117 4.165372 TGTGAGGGTAGGTTGTCTTCTTTT 59.835 41.667 0.00 0.00 0.00 2.27
5526 6118 5.131067 GTGAGGGTAGGTTGTCTTCTTTTT 58.869 41.667 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.966787 TTTGGACTGGGCGGGCAC 62.967 66.667 3.27 0.00 0.00 5.01
27 28 3.508840 GCGCGGATTTGGACTGGG 61.509 66.667 8.83 0.00 0.00 4.45
56 57 4.830765 CGAGCGGGGCGGAATTGA 62.831 66.667 0.00 0.00 0.00 2.57
87 88 2.395360 GCAGGGCGCATTCGTAACA 61.395 57.895 10.83 0.00 41.79 2.41
256 261 2.344203 CGCACGGGACTCTCTCCTT 61.344 63.158 0.00 0.00 39.39 3.36
421 434 0.609131 AACAGCAGGTTGATTCCCCG 60.609 55.000 0.00 0.00 38.60 5.73
617 685 3.851976 AAGTGCGAACTACCACTAGAG 57.148 47.619 0.00 0.00 41.16 2.43
631 699 2.084610 TCCTCTGTCATCAAAGTGCG 57.915 50.000 0.00 0.00 0.00 5.34
656 724 4.093556 GCAAACTATCACGGGAAGAAAGAG 59.906 45.833 0.00 0.00 0.00 2.85
657 725 4.000988 GCAAACTATCACGGGAAGAAAGA 58.999 43.478 0.00 0.00 0.00 2.52
667 738 3.554524 CACCAAAGTGCAAACTATCACG 58.445 45.455 0.00 0.00 37.14 4.35
688 759 9.228949 AGAATTCTGATGCTGGAATATATTCAC 57.771 33.333 23.54 14.69 38.53 3.18
689 760 9.227777 CAGAATTCTGATGCTGGAATATATTCA 57.772 33.333 28.13 11.17 46.59 2.57
725 798 1.597663 GTGACCCTGAAAACAGACACG 59.402 52.381 0.00 0.00 0.00 4.49
741 814 1.131504 CACGCAGAGGTAGAGAGTGAC 59.868 57.143 0.00 0.00 0.00 3.67
746 819 1.202582 GCTTTCACGCAGAGGTAGAGA 59.797 52.381 0.00 0.00 0.00 3.10
765 838 0.389948 CTTCCGTGTGGTGGAGTAGC 60.390 60.000 0.00 0.00 36.72 3.58
766 839 1.254026 TCTTCCGTGTGGTGGAGTAG 58.746 55.000 0.00 0.00 36.72 2.57
769 842 1.270839 ACAATCTTCCGTGTGGTGGAG 60.271 52.381 0.00 0.00 36.72 3.86
777 850 8.986477 TCATATATGATGTACAATCTTCCGTG 57.014 34.615 11.49 0.00 0.00 4.94
869 1090 3.929334 TTTTCCATGGGTCCGGGCG 62.929 63.158 13.02 0.00 0.00 6.13
883 1108 5.619625 AGCTTTCAGATGTGCTAGTTTTC 57.380 39.130 0.00 0.00 33.64 2.29
897 1122 6.031751 AGTAGAGGTGAAGTAAGCTTTCAG 57.968 41.667 3.20 0.00 34.61 3.02
916 1141 6.796705 ACTAATTCACCGAACCAAAAGTAG 57.203 37.500 0.00 0.00 0.00 2.57
924 1149 8.092687 ACATACCATATACTAATTCACCGAACC 58.907 37.037 0.00 0.00 0.00 3.62
951 1182 6.763135 GCCATGTAGAAATCAAGACTGTATCA 59.237 38.462 0.00 0.00 0.00 2.15
953 1184 6.653020 TGCCATGTAGAAATCAAGACTGTAT 58.347 36.000 0.00 0.00 0.00 2.29
965 1196 1.065199 CCTGCCTCTGCCATGTAGAAA 60.065 52.381 0.00 0.00 36.33 2.52
986 1219 1.511850 CGCCATGAGTTCACTGAACA 58.488 50.000 21.39 4.84 44.11 3.18
1072 1305 1.662122 GTCGGCGGGTACTTGTAAATG 59.338 52.381 7.21 0.00 0.00 2.32
1089 1322 1.107114 AGGCAGTATCTCAGTGGTCG 58.893 55.000 0.00 0.00 0.00 4.79
1116 1349 8.734386 CAAGTTGTATTAAATCAGAGCTTCCTT 58.266 33.333 0.00 0.00 0.00 3.36
1122 1356 6.963805 GTCAGCAAGTTGTATTAAATCAGAGC 59.036 38.462 4.48 0.00 0.00 4.09
1159 1393 2.280186 GCCATAGAAGGTCGGGCG 60.280 66.667 0.00 0.00 34.56 6.13
1161 1395 1.227263 CGTGCCATAGAAGGTCGGG 60.227 63.158 0.00 0.00 0.00 5.14
1178 1412 9.098355 TCATACAACTAATTTCCAGAAAGATCG 57.902 33.333 0.00 0.00 33.32 3.69
1208 1442 9.941325 TTGTGTTGGCAATGAATTTCTTATAAT 57.059 25.926 1.92 0.00 0.00 1.28
1242 1476 7.268872 GCTGCATTGACGGAATTTTTAAAATTG 59.731 33.333 18.78 9.11 0.00 2.32
1243 1477 7.041508 TGCTGCATTGACGGAATTTTTAAAATT 60.042 29.630 14.56 14.56 0.00 1.82
1244 1478 6.426328 TGCTGCATTGACGGAATTTTTAAAAT 59.574 30.769 0.00 0.00 0.00 1.82
1245 1479 5.755375 TGCTGCATTGACGGAATTTTTAAAA 59.245 32.000 0.00 0.00 0.00 1.52
1249 1488 3.383620 TGCTGCATTGACGGAATTTTT 57.616 38.095 0.00 0.00 0.00 1.94
1254 1493 1.603456 TCTTTGCTGCATTGACGGAA 58.397 45.000 1.84 0.00 0.00 4.30
1260 1499 3.673338 CAGTGATGTTCTTTGCTGCATTG 59.327 43.478 1.84 0.00 0.00 2.82
1277 1516 3.178046 TGAAGGCCAGTAATACCAGTGA 58.822 45.455 5.01 0.00 0.00 3.41
1317 1556 0.531974 GACAGACCAACGAGGCAACA 60.532 55.000 0.00 0.00 43.14 3.33
1325 1564 4.055360 TGAGTTGTATTGACAGACCAACG 58.945 43.478 0.00 0.00 40.14 4.10
1717 1956 0.535797 GGGGACAGTAAGAGAACGGG 59.464 60.000 0.00 0.00 0.00 5.28
1755 2003 8.717821 TGATGTTACTGCTTAAATTACTGTGTC 58.282 33.333 0.00 0.00 0.00 3.67
1773 2021 5.699097 TGCCTGTAAAGGTTTGATGTTAC 57.301 39.130 0.00 0.00 0.00 2.50
1802 2050 2.257353 GTGGCATGACACCAGAACC 58.743 57.895 21.83 0.00 38.04 3.62
2178 2717 5.995282 TGTCCTTCAAACCACAATACTACTG 59.005 40.000 0.00 0.00 0.00 2.74
2230 2769 8.677300 TGGAACATATTTTAATTGAGACTCAGC 58.323 33.333 5.10 0.00 0.00 4.26
2233 2772 8.677300 TGCTGGAACATATTTTAATTGAGACTC 58.323 33.333 0.00 0.00 38.20 3.36
2234 2773 8.462016 GTGCTGGAACATATTTTAATTGAGACT 58.538 33.333 0.00 0.00 38.20 3.24
2236 2775 8.243426 GTGTGCTGGAACATATTTTAATTGAGA 58.757 33.333 0.00 0.00 38.20 3.27
2275 2816 6.109359 ACACAGATCTTCTATGTTAGGTTGC 58.891 40.000 0.00 0.00 28.05 4.17
2313 2854 4.488126 TGTTCTGAAATTGCAGTGTAGC 57.512 40.909 13.35 0.00 37.20 3.58
2343 2884 7.476540 AGGAACATTAAAAGGACCCATTTAC 57.523 36.000 0.68 0.00 0.00 2.01
2354 2895 6.018832 CAGCACACCAAAAGGAACATTAAAAG 60.019 38.462 0.00 0.00 0.00 2.27
2359 2900 2.765699 ACAGCACACCAAAAGGAACATT 59.234 40.909 0.00 0.00 0.00 2.71
2389 2949 1.269831 ACGATCTTCTATTCAGCCGGC 60.270 52.381 21.89 21.89 0.00 6.13
2530 3090 0.251916 TGGTCAAAGGGCACGATAGG 59.748 55.000 0.00 0.00 43.77 2.57
2570 3130 6.825721 AGGTTCAGATGCTGGAAGTAAAATAG 59.174 38.462 0.00 0.00 35.30 1.73
2571 3131 6.721318 AGGTTCAGATGCTGGAAGTAAAATA 58.279 36.000 0.00 0.00 35.30 1.40
2572 3132 5.574188 AGGTTCAGATGCTGGAAGTAAAAT 58.426 37.500 0.00 0.00 35.30 1.82
2602 3162 7.102346 AGAAGTGTGTTCAAGGAAGATATCAG 58.898 38.462 5.32 0.00 0.00 2.90
2829 3390 8.066612 ACTTGATTCCAGAAACAGAAGAAAAA 57.933 30.769 0.00 0.00 0.00 1.94
2977 3538 8.318412 TCCAGACACTAAACACAATACATGTAT 58.682 33.333 12.75 12.75 41.46 2.29
2988 3549 4.452455 CAGGATTGTCCAGACACTAAACAC 59.548 45.833 0.00 0.00 41.67 3.32
3098 3659 8.966868 AGAACCTCTGAAAATTAAACAAGTCAA 58.033 29.630 0.00 0.00 0.00 3.18
3099 3660 8.519799 AGAACCTCTGAAAATTAAACAAGTCA 57.480 30.769 0.00 0.00 0.00 3.41
3432 3995 0.250467 TGACTGGAGCTGGAAAGCAC 60.250 55.000 0.00 0.00 37.25 4.40
3468 4031 4.454728 TGCCCTTGAATTAGCAACATTC 57.545 40.909 0.00 0.00 30.97 2.67
3633 4198 2.159382 CGCTAGGAATTGGGTTGTTGT 58.841 47.619 0.00 0.00 0.00 3.32
3699 4265 2.205022 TCCCTGAAGCAGAAATGGTG 57.795 50.000 0.00 0.00 32.44 4.17
4042 4614 5.163513 CACCAAAAGGACACTATCAAATGC 58.836 41.667 0.00 0.00 0.00 3.56
4185 4760 5.221843 ACAAAAGTTCCATACCACTAGAGCA 60.222 40.000 0.00 0.00 0.00 4.26
4245 4820 0.179051 AACACCGGCGGACAAACTAA 60.179 50.000 35.78 0.00 0.00 2.24
4254 4829 1.501741 CAGATTCAAACACCGGCGG 59.498 57.895 27.06 27.06 0.00 6.13
4303 4881 3.686016 GGTGCCCTTAAGTTTCATCTGA 58.314 45.455 0.97 0.00 0.00 3.27
4307 4885 1.173913 GCGGTGCCCTTAAGTTTCAT 58.826 50.000 0.97 0.00 0.00 2.57
4513 5094 0.592637 TCAATCAGTTTGCAGCCACG 59.407 50.000 0.00 0.00 35.16 4.94
4569 5156 3.080158 TTGCTGAAACCCCAGGCCA 62.080 57.895 5.01 0.00 34.82 5.36
4640 5231 3.612004 GCCGGAGTTCCTGAATATACTCG 60.612 52.174 5.05 0.00 38.27 4.18
4730 5321 6.707440 TTACAGTGAAAACATGGACACAAT 57.293 33.333 0.00 0.00 35.97 2.71
4731 5322 6.707440 ATTACAGTGAAAACATGGACACAA 57.293 33.333 0.00 0.00 35.97 3.33
4759 5351 5.680619 CCCCTATATTACAACACTGCTCAA 58.319 41.667 0.00 0.00 0.00 3.02
4977 5569 0.692476 AGATGTACCTTGTGCCAGCA 59.308 50.000 0.00 0.00 0.00 4.41
5045 5637 5.345202 CCAATATCATAGACGACTTTACGGC 59.655 44.000 0.00 0.00 42.10 5.68
5070 5662 6.774354 TTACAGTGTCATCGGTTAAAGAAC 57.226 37.500 0.00 0.00 34.56 3.01
5071 5663 6.987992 ACTTTACAGTGTCATCGGTTAAAGAA 59.012 34.615 14.68 0.00 0.00 2.52
5072 5664 6.518493 ACTTTACAGTGTCATCGGTTAAAGA 58.482 36.000 14.68 0.00 0.00 2.52
5073 5665 6.780706 ACTTTACAGTGTCATCGGTTAAAG 57.219 37.500 0.00 4.20 0.00 1.85
5074 5666 6.539464 ACAACTTTACAGTGTCATCGGTTAAA 59.461 34.615 0.00 0.00 31.60 1.52
5075 5667 6.050432 ACAACTTTACAGTGTCATCGGTTAA 58.950 36.000 0.00 0.00 31.60 2.01
5076 5668 5.603596 ACAACTTTACAGTGTCATCGGTTA 58.396 37.500 0.00 0.00 31.60 2.85
5077 5669 4.448210 ACAACTTTACAGTGTCATCGGTT 58.552 39.130 0.00 0.00 31.60 4.44
5078 5670 4.056050 GACAACTTTACAGTGTCATCGGT 58.944 43.478 0.00 0.00 34.10 4.69
5079 5671 4.307432 AGACAACTTTACAGTGTCATCGG 58.693 43.478 0.00 0.00 35.31 4.18
5080 5672 6.806739 TCATAGACAACTTTACAGTGTCATCG 59.193 38.462 0.00 0.00 35.31 3.84
5081 5673 8.709386 ATCATAGACAACTTTACAGTGTCATC 57.291 34.615 0.00 0.00 35.31 2.92
5085 5677 9.601217 GGAATATCATAGACAACTTTACAGTGT 57.399 33.333 0.00 0.00 31.60 3.55
5086 5678 9.823647 AGGAATATCATAGACAACTTTACAGTG 57.176 33.333 0.00 0.00 31.60 3.66
5087 5679 9.823647 CAGGAATATCATAGACAACTTTACAGT 57.176 33.333 0.00 0.00 33.11 3.55
5093 5685 9.722184 CATGATCAGGAATATCATAGACAACTT 57.278 33.333 0.00 0.00 41.13 2.66
5094 5686 9.097946 TCATGATCAGGAATATCATAGACAACT 57.902 33.333 7.78 0.00 41.13 3.16
5095 5687 9.887629 ATCATGATCAGGAATATCATAGACAAC 57.112 33.333 14.88 0.00 41.13 3.32
5096 5688 9.886132 CATCATGATCAGGAATATCATAGACAA 57.114 33.333 14.88 0.00 41.13 3.18
5097 5689 8.483758 CCATCATGATCAGGAATATCATAGACA 58.516 37.037 14.88 0.00 41.13 3.41
5098 5690 8.702819 TCCATCATGATCAGGAATATCATAGAC 58.297 37.037 14.88 0.00 41.13 2.59
5099 5691 8.849543 TCCATCATGATCAGGAATATCATAGA 57.150 34.615 14.88 0.32 41.13 1.98
5110 5702 3.055021 AGCATAGCTCCATCATGATCAGG 60.055 47.826 4.86 5.43 30.62 3.86
5152 5744 1.976474 GGAAGCCGGGAATGCAACA 60.976 57.895 2.18 0.00 0.00 3.33
5154 5746 2.362375 GGGAAGCCGGGAATGCAA 60.362 61.111 2.18 0.00 0.00 4.08
5167 5759 4.722526 TGTCCTCTGAAAGATTTGGGAA 57.277 40.909 0.00 0.00 45.62 3.97
5168 5760 4.507335 CCTTGTCCTCTGAAAGATTTGGGA 60.507 45.833 0.00 0.00 45.62 4.37
5186 5778 2.672996 GATGTGGTGGCGCCTTGT 60.673 61.111 29.70 7.54 38.35 3.16
5198 5790 2.089980 CCTTGCCCTCTGAAAGATGTG 58.910 52.381 0.00 0.00 45.62 3.21
5199 5791 1.615384 GCCTTGCCCTCTGAAAGATGT 60.615 52.381 0.00 0.00 45.62 3.06
5200 5792 1.101331 GCCTTGCCCTCTGAAAGATG 58.899 55.000 0.00 0.00 45.62 2.90
5201 5793 0.393537 CGCCTTGCCCTCTGAAAGAT 60.394 55.000 0.00 0.00 45.62 2.40
5202 5794 1.003355 CGCCTTGCCCTCTGAAAGA 60.003 57.895 0.00 0.00 43.69 2.52
5203 5795 2.694760 GCGCCTTGCCCTCTGAAAG 61.695 63.158 0.00 0.00 37.76 2.62
5204 5796 2.672996 GCGCCTTGCCCTCTGAAA 60.673 61.111 0.00 0.00 37.76 2.69
5213 5805 4.496927 CGAAATGGGGCGCCTTGC 62.497 66.667 28.56 10.90 45.38 4.01
5214 5806 3.061848 ACGAAATGGGGCGCCTTG 61.062 61.111 28.56 12.61 0.00 3.61
5215 5807 2.837031 ATCACGAAATGGGGCGCCTT 62.837 55.000 28.56 13.14 0.00 4.35
5216 5808 3.344137 ATCACGAAATGGGGCGCCT 62.344 57.895 28.56 5.35 0.00 5.52
5217 5809 2.828549 ATCACGAAATGGGGCGCC 60.829 61.111 21.18 21.18 0.00 6.53
5218 5810 2.408835 CATCACGAAATGGGGCGC 59.591 61.111 0.00 0.00 0.00 6.53
5219 5811 2.114670 AGCATCACGAAATGGGGCG 61.115 57.895 0.00 0.00 34.25 6.13
5220 5812 1.434696 CAGCATCACGAAATGGGGC 59.565 57.895 0.00 0.00 0.00 5.80
5221 5813 2.008268 GCCAGCATCACGAAATGGGG 62.008 60.000 0.00 0.00 0.00 4.96
5222 5814 1.314534 TGCCAGCATCACGAAATGGG 61.315 55.000 0.00 0.00 0.00 4.00
5223 5815 0.742505 ATGCCAGCATCACGAAATGG 59.257 50.000 0.00 0.00 29.42 3.16
5232 5824 0.462581 TTGACTCCGATGCCAGCATC 60.463 55.000 20.31 20.31 46.71 3.91
5233 5825 0.182061 ATTGACTCCGATGCCAGCAT 59.818 50.000 4.45 4.45 39.69 3.79
5234 5826 0.745486 CATTGACTCCGATGCCAGCA 60.745 55.000 0.00 0.00 0.00 4.41
5235 5827 0.462581 TCATTGACTCCGATGCCAGC 60.463 55.000 0.00 0.00 34.77 4.85
5236 5828 2.251409 ATCATTGACTCCGATGCCAG 57.749 50.000 0.00 0.00 34.77 4.85
5237 5829 3.667360 CATATCATTGACTCCGATGCCA 58.333 45.455 0.00 0.00 34.77 4.92
5238 5830 2.417933 GCATATCATTGACTCCGATGCC 59.582 50.000 0.00 0.00 34.77 4.40
5239 5831 3.332919 AGCATATCATTGACTCCGATGC 58.667 45.455 9.54 9.54 38.75 3.91
5240 5832 4.753610 ACAAGCATATCATTGACTCCGATG 59.246 41.667 3.92 0.00 35.85 3.84
5241 5833 4.753610 CACAAGCATATCATTGACTCCGAT 59.246 41.667 3.92 0.00 0.00 4.18
5242 5834 4.122046 CACAAGCATATCATTGACTCCGA 58.878 43.478 3.92 0.00 0.00 4.55
5243 5835 4.122046 TCACAAGCATATCATTGACTCCG 58.878 43.478 3.92 0.00 0.00 4.63
5244 5836 5.587844 ACTTCACAAGCATATCATTGACTCC 59.412 40.000 3.92 0.00 0.00 3.85
5245 5837 6.674694 ACTTCACAAGCATATCATTGACTC 57.325 37.500 3.92 0.00 0.00 3.36
5246 5838 6.432162 ACAACTTCACAAGCATATCATTGACT 59.568 34.615 3.92 0.00 0.00 3.41
5247 5839 6.615088 ACAACTTCACAAGCATATCATTGAC 58.385 36.000 3.92 0.00 0.00 3.18
5248 5840 6.822667 ACAACTTCACAAGCATATCATTGA 57.177 33.333 3.92 0.00 0.00 2.57
5249 5841 9.016623 CATTACAACTTCACAAGCATATCATTG 57.983 33.333 0.00 0.00 0.00 2.82
5250 5842 8.959548 TCATTACAACTTCACAAGCATATCATT 58.040 29.630 0.00 0.00 0.00 2.57
5251 5843 8.510243 TCATTACAACTTCACAAGCATATCAT 57.490 30.769 0.00 0.00 0.00 2.45
5252 5844 7.920160 TCATTACAACTTCACAAGCATATCA 57.080 32.000 0.00 0.00 0.00 2.15
5253 5845 7.912250 CCTTCATTACAACTTCACAAGCATATC 59.088 37.037 0.00 0.00 0.00 1.63
5254 5846 7.394359 ACCTTCATTACAACTTCACAAGCATAT 59.606 33.333 0.00 0.00 0.00 1.78
5255 5847 6.714810 ACCTTCATTACAACTTCACAAGCATA 59.285 34.615 0.00 0.00 0.00 3.14
5256 5848 5.536161 ACCTTCATTACAACTTCACAAGCAT 59.464 36.000 0.00 0.00 0.00 3.79
5257 5849 4.887071 ACCTTCATTACAACTTCACAAGCA 59.113 37.500 0.00 0.00 0.00 3.91
5258 5850 5.438761 ACCTTCATTACAACTTCACAAGC 57.561 39.130 0.00 0.00 0.00 4.01
5259 5851 7.026631 TCAACCTTCATTACAACTTCACAAG 57.973 36.000 0.00 0.00 0.00 3.16
5260 5852 6.459573 GCTCAACCTTCATTACAACTTCACAA 60.460 38.462 0.00 0.00 0.00 3.33
5261 5853 5.008613 GCTCAACCTTCATTACAACTTCACA 59.991 40.000 0.00 0.00 0.00 3.58
5262 5854 5.452777 GCTCAACCTTCATTACAACTTCAC 58.547 41.667 0.00 0.00 0.00 3.18
5263 5855 4.518970 GGCTCAACCTTCATTACAACTTCA 59.481 41.667 0.00 0.00 34.51 3.02
5264 5856 4.518970 TGGCTCAACCTTCATTACAACTTC 59.481 41.667 0.00 0.00 40.22 3.01
5265 5857 4.469657 TGGCTCAACCTTCATTACAACTT 58.530 39.130 0.00 0.00 40.22 2.66
5266 5858 4.098914 TGGCTCAACCTTCATTACAACT 57.901 40.909 0.00 0.00 40.22 3.16
5267 5859 4.278419 AGTTGGCTCAACCTTCATTACAAC 59.722 41.667 12.63 0.00 44.49 3.32
5268 5860 4.278170 CAGTTGGCTCAACCTTCATTACAA 59.722 41.667 12.63 0.00 44.49 2.41
5269 5861 3.820467 CAGTTGGCTCAACCTTCATTACA 59.180 43.478 12.63 0.00 44.49 2.41
5270 5862 3.821033 ACAGTTGGCTCAACCTTCATTAC 59.179 43.478 12.63 0.00 44.49 1.89
5271 5863 4.072131 GACAGTTGGCTCAACCTTCATTA 58.928 43.478 12.63 0.00 44.49 1.90
5272 5864 2.887152 GACAGTTGGCTCAACCTTCATT 59.113 45.455 12.63 0.00 44.49 2.57
5273 5865 2.508526 GACAGTTGGCTCAACCTTCAT 58.491 47.619 12.63 0.00 44.49 2.57
5274 5866 1.810031 CGACAGTTGGCTCAACCTTCA 60.810 52.381 12.63 0.00 44.49 3.02
5275 5867 0.868406 CGACAGTTGGCTCAACCTTC 59.132 55.000 12.63 9.24 44.49 3.46
5276 5868 0.468226 TCGACAGTTGGCTCAACCTT 59.532 50.000 12.63 2.71 44.49 3.50
5277 5869 0.249911 GTCGACAGTTGGCTCAACCT 60.250 55.000 11.55 1.46 44.49 3.50
5278 5870 1.228657 GGTCGACAGTTGGCTCAACC 61.229 60.000 18.91 0.00 44.49 3.77
5279 5871 0.249911 AGGTCGACAGTTGGCTCAAC 60.250 55.000 18.91 9.31 43.83 3.18
5280 5872 0.468226 AAGGTCGACAGTTGGCTCAA 59.532 50.000 18.91 0.00 0.00 3.02
5281 5873 0.249868 CAAGGTCGACAGTTGGCTCA 60.250 55.000 18.91 0.00 0.00 4.26
5282 5874 0.249911 ACAAGGTCGACAGTTGGCTC 60.250 55.000 25.22 5.65 0.00 4.70
5283 5875 0.180406 AACAAGGTCGACAGTTGGCT 59.820 50.000 25.22 14.21 0.00 4.75
5284 5876 0.307760 CAACAAGGTCGACAGTTGGC 59.692 55.000 26.66 8.90 38.09 4.52
5286 5878 0.944386 CCCAACAAGGTCGACAGTTG 59.056 55.000 27.06 27.06 40.63 3.16
5287 5879 0.834612 TCCCAACAAGGTCGACAGTT 59.165 50.000 18.91 15.21 34.66 3.16
5288 5880 0.834612 TTCCCAACAAGGTCGACAGT 59.165 50.000 18.91 9.76 34.66 3.55
5289 5881 1.226746 GTTCCCAACAAGGTCGACAG 58.773 55.000 18.91 9.07 34.66 3.51
5290 5882 0.179040 GGTTCCCAACAAGGTCGACA 60.179 55.000 18.91 0.00 34.66 4.35
5291 5883 0.108019 AGGTTCCCAACAAGGTCGAC 59.892 55.000 7.13 7.13 34.66 4.20
5292 5884 0.395312 GAGGTTCCCAACAAGGTCGA 59.605 55.000 0.00 0.00 34.66 4.20
5293 5885 0.605589 GGAGGTTCCCAACAAGGTCG 60.606 60.000 0.00 0.00 34.66 4.79
5294 5886 3.341263 GGAGGTTCCCAACAAGGTC 57.659 57.895 0.00 0.00 34.66 3.85
5304 5896 6.534079 CGTAATGATAATATTCGGGAGGTTCC 59.466 42.308 0.00 0.00 35.23 3.62
5305 5897 6.534079 CCGTAATGATAATATTCGGGAGGTTC 59.466 42.308 0.00 0.00 32.30 3.62
5306 5898 6.403878 CCGTAATGATAATATTCGGGAGGTT 58.596 40.000 0.00 0.00 32.30 3.50
5307 5899 5.626116 GCCGTAATGATAATATTCGGGAGGT 60.626 44.000 10.42 0.00 34.39 3.85
5308 5900 4.809426 GCCGTAATGATAATATTCGGGAGG 59.191 45.833 10.42 0.15 34.39 4.30
5309 5901 5.661458 AGCCGTAATGATAATATTCGGGAG 58.339 41.667 10.42 0.00 34.39 4.30
5310 5902 5.657474 GAGCCGTAATGATAATATTCGGGA 58.343 41.667 10.42 0.00 34.39 5.14
5311 5903 4.503007 CGAGCCGTAATGATAATATTCGGG 59.497 45.833 10.42 0.00 34.39 5.14
5312 5904 4.503007 CCGAGCCGTAATGATAATATTCGG 59.497 45.833 5.40 5.40 35.63 4.30
5313 5905 5.100259 ACCGAGCCGTAATGATAATATTCG 58.900 41.667 0.00 0.00 0.00 3.34
5314 5906 6.963049 AACCGAGCCGTAATGATAATATTC 57.037 37.500 0.00 0.00 0.00 1.75
5315 5907 7.548075 CCTTAACCGAGCCGTAATGATAATATT 59.452 37.037 0.00 0.00 0.00 1.28
5316 5908 7.039882 CCTTAACCGAGCCGTAATGATAATAT 58.960 38.462 0.00 0.00 0.00 1.28
5317 5909 6.209192 TCCTTAACCGAGCCGTAATGATAATA 59.791 38.462 0.00 0.00 0.00 0.98
5318 5910 5.011329 TCCTTAACCGAGCCGTAATGATAAT 59.989 40.000 0.00 0.00 0.00 1.28
5319 5911 4.341806 TCCTTAACCGAGCCGTAATGATAA 59.658 41.667 0.00 0.00 0.00 1.75
5320 5912 3.890756 TCCTTAACCGAGCCGTAATGATA 59.109 43.478 0.00 0.00 0.00 2.15
5321 5913 2.696707 TCCTTAACCGAGCCGTAATGAT 59.303 45.455 0.00 0.00 0.00 2.45
5322 5914 2.100252 CTCCTTAACCGAGCCGTAATGA 59.900 50.000 0.00 0.00 0.00 2.57
5323 5915 2.100252 TCTCCTTAACCGAGCCGTAATG 59.900 50.000 0.00 0.00 0.00 1.90
5324 5916 2.381911 TCTCCTTAACCGAGCCGTAAT 58.618 47.619 0.00 0.00 0.00 1.89
5325 5917 1.838112 TCTCCTTAACCGAGCCGTAA 58.162 50.000 0.00 0.00 0.00 3.18
5326 5918 1.952296 GATCTCCTTAACCGAGCCGTA 59.048 52.381 0.00 0.00 0.00 4.02
5327 5919 0.745468 GATCTCCTTAACCGAGCCGT 59.255 55.000 0.00 0.00 0.00 5.68
5328 5920 0.744874 TGATCTCCTTAACCGAGCCG 59.255 55.000 0.00 0.00 0.00 5.52
5329 5921 4.602340 TTATGATCTCCTTAACCGAGCC 57.398 45.455 0.00 0.00 0.00 4.70
5330 5922 5.635700 GTCATTATGATCTCCTTAACCGAGC 59.364 44.000 0.00 0.00 0.00 5.03
5331 5923 6.159988 GGTCATTATGATCTCCTTAACCGAG 58.840 44.000 0.00 0.00 0.00 4.63
5332 5924 5.011738 GGGTCATTATGATCTCCTTAACCGA 59.988 44.000 5.39 0.00 0.00 4.69
5333 5925 5.238583 GGGTCATTATGATCTCCTTAACCG 58.761 45.833 5.39 0.00 0.00 4.44
5334 5926 5.073144 TGGGGTCATTATGATCTCCTTAACC 59.927 44.000 2.54 0.00 22.65 2.85
5335 5927 6.187727 TGGGGTCATTATGATCTCCTTAAC 57.812 41.667 2.54 0.00 22.65 2.01
5336 5928 7.073598 TCAATGGGGTCATTATGATCTCCTTAA 59.926 37.037 2.54 0.00 41.29 1.85
5337 5929 6.562223 TCAATGGGGTCATTATGATCTCCTTA 59.438 38.462 2.54 0.00 41.29 2.69
5338 5930 5.373555 TCAATGGGGTCATTATGATCTCCTT 59.626 40.000 2.54 0.00 41.29 3.36
5339 5931 4.915809 TCAATGGGGTCATTATGATCTCCT 59.084 41.667 2.54 0.00 41.29 3.69
5340 5932 5.246981 TCAATGGGGTCATTATGATCTCC 57.753 43.478 2.54 5.02 41.29 3.71
5341 5933 6.944290 TGATTCAATGGGGTCATTATGATCTC 59.056 38.462 5.39 1.45 41.29 2.75
5342 5934 6.855667 TGATTCAATGGGGTCATTATGATCT 58.144 36.000 5.39 0.00 41.29 2.75
5343 5935 7.449395 TCTTGATTCAATGGGGTCATTATGATC 59.551 37.037 0.00 0.00 41.29 2.92
5344 5936 7.299896 TCTTGATTCAATGGGGTCATTATGAT 58.700 34.615 0.00 0.00 41.29 2.45
5345 5937 6.671605 TCTTGATTCAATGGGGTCATTATGA 58.328 36.000 0.00 0.00 41.29 2.15
5346 5938 6.964807 TCTTGATTCAATGGGGTCATTATG 57.035 37.500 0.00 0.00 41.29 1.90
5347 5939 7.234166 GGATTCTTGATTCAATGGGGTCATTAT 59.766 37.037 0.00 0.00 41.29 1.28
5348 5940 6.550854 GGATTCTTGATTCAATGGGGTCATTA 59.449 38.462 0.00 0.00 41.29 1.90
5349 5941 5.364735 GGATTCTTGATTCAATGGGGTCATT 59.635 40.000 0.00 0.00 43.79 2.57
5350 5942 4.897670 GGATTCTTGATTCAATGGGGTCAT 59.102 41.667 0.00 0.00 34.56 3.06
5351 5943 4.280819 GGATTCTTGATTCAATGGGGTCA 58.719 43.478 0.00 0.00 0.00 4.02
5352 5944 3.316308 CGGATTCTTGATTCAATGGGGTC 59.684 47.826 0.00 0.00 0.00 4.46
5353 5945 3.290710 CGGATTCTTGATTCAATGGGGT 58.709 45.455 0.00 0.00 0.00 4.95
5354 5946 2.624838 CCGGATTCTTGATTCAATGGGG 59.375 50.000 0.00 0.00 0.00 4.96
5355 5947 2.035066 GCCGGATTCTTGATTCAATGGG 59.965 50.000 5.05 0.00 0.00 4.00
5356 5948 2.689471 TGCCGGATTCTTGATTCAATGG 59.311 45.455 5.05 0.00 0.00 3.16
5357 5949 4.107622 GTTGCCGGATTCTTGATTCAATG 58.892 43.478 5.05 0.00 0.00 2.82
5358 5950 3.763360 TGTTGCCGGATTCTTGATTCAAT 59.237 39.130 5.05 0.00 0.00 2.57
5359 5951 3.153130 TGTTGCCGGATTCTTGATTCAA 58.847 40.909 5.05 0.00 0.00 2.69
5360 5952 2.789213 TGTTGCCGGATTCTTGATTCA 58.211 42.857 5.05 0.00 0.00 2.57
5361 5953 3.848272 TTGTTGCCGGATTCTTGATTC 57.152 42.857 5.05 0.00 0.00 2.52
5362 5954 3.826157 TCTTTGTTGCCGGATTCTTGATT 59.174 39.130 5.05 0.00 0.00 2.57
5363 5955 3.191371 GTCTTTGTTGCCGGATTCTTGAT 59.809 43.478 5.05 0.00 0.00 2.57
5364 5956 2.552315 GTCTTTGTTGCCGGATTCTTGA 59.448 45.455 5.05 0.00 0.00 3.02
5365 5957 2.665519 CGTCTTTGTTGCCGGATTCTTG 60.666 50.000 5.05 0.00 0.00 3.02
5366 5958 1.535462 CGTCTTTGTTGCCGGATTCTT 59.465 47.619 5.05 0.00 0.00 2.52
5367 5959 1.156736 CGTCTTTGTTGCCGGATTCT 58.843 50.000 5.05 0.00 0.00 2.40
5368 5960 1.136057 GTCGTCTTTGTTGCCGGATTC 60.136 52.381 5.05 0.00 0.00 2.52
5369 5961 0.872388 GTCGTCTTTGTTGCCGGATT 59.128 50.000 5.05 0.00 0.00 3.01
5370 5962 0.250124 TGTCGTCTTTGTTGCCGGAT 60.250 50.000 5.05 0.00 0.00 4.18
5371 5963 0.250124 ATGTCGTCTTTGTTGCCGGA 60.250 50.000 5.05 0.00 0.00 5.14
5372 5964 0.110238 CATGTCGTCTTTGTTGCCGG 60.110 55.000 0.00 0.00 0.00 6.13
5373 5965 0.110238 CCATGTCGTCTTTGTTGCCG 60.110 55.000 0.00 0.00 0.00 5.69
5374 5966 1.069227 GTCCATGTCGTCTTTGTTGCC 60.069 52.381 0.00 0.00 0.00 4.52
5375 5967 1.873591 AGTCCATGTCGTCTTTGTTGC 59.126 47.619 0.00 0.00 0.00 4.17
5376 5968 2.349817 GCAGTCCATGTCGTCTTTGTTG 60.350 50.000 0.00 0.00 0.00 3.33
5377 5969 1.873591 GCAGTCCATGTCGTCTTTGTT 59.126 47.619 0.00 0.00 0.00 2.83
5378 5970 1.202639 TGCAGTCCATGTCGTCTTTGT 60.203 47.619 0.00 0.00 0.00 2.83
5379 5971 1.511850 TGCAGTCCATGTCGTCTTTG 58.488 50.000 0.00 0.00 0.00 2.77
5380 5972 2.146342 CTTGCAGTCCATGTCGTCTTT 58.854 47.619 0.00 0.00 0.00 2.52
5381 5973 1.070758 ACTTGCAGTCCATGTCGTCTT 59.929 47.619 0.00 0.00 0.00 3.01
5382 5974 0.681733 ACTTGCAGTCCATGTCGTCT 59.318 50.000 0.00 0.00 0.00 4.18
5383 5975 1.071605 GACTTGCAGTCCATGTCGTC 58.928 55.000 5.33 0.00 39.28 4.20
5384 5976 0.681733 AGACTTGCAGTCCATGTCGT 59.318 50.000 11.24 0.00 46.18 4.34
5385 5977 1.073964 CAGACTTGCAGTCCATGTCG 58.926 55.000 11.24 0.00 46.18 4.35
5397 5989 2.423185 TGTGTTTGGAGTTGCAGACTTG 59.577 45.455 3.56 0.00 39.19 3.16
5398 5990 2.423538 GTGTGTTTGGAGTTGCAGACTT 59.576 45.455 3.56 0.00 39.19 3.01
5399 5991 2.017049 GTGTGTTTGGAGTTGCAGACT 58.983 47.619 1.82 1.82 42.70 3.24
5400 5992 1.742831 TGTGTGTTTGGAGTTGCAGAC 59.257 47.619 0.00 0.00 0.00 3.51
5401 5993 2.121291 TGTGTGTTTGGAGTTGCAGA 57.879 45.000 0.00 0.00 0.00 4.26
5402 5994 2.094803 TGTTGTGTGTTTGGAGTTGCAG 60.095 45.455 0.00 0.00 0.00 4.41
5403 5995 1.889170 TGTTGTGTGTTTGGAGTTGCA 59.111 42.857 0.00 0.00 0.00 4.08
5404 5996 2.645730 TGTTGTGTGTTTGGAGTTGC 57.354 45.000 0.00 0.00 0.00 4.17
5405 5997 3.446799 CCATGTTGTGTGTTTGGAGTTG 58.553 45.455 0.00 0.00 0.00 3.16
5406 5998 2.430332 CCCATGTTGTGTGTTTGGAGTT 59.570 45.455 0.00 0.00 0.00 3.01
5407 5999 2.031120 CCCATGTTGTGTGTTTGGAGT 58.969 47.619 0.00 0.00 0.00 3.85
5408 6000 2.305928 TCCCATGTTGTGTGTTTGGAG 58.694 47.619 0.00 0.00 0.00 3.86
5409 6001 2.443958 TCCCATGTTGTGTGTTTGGA 57.556 45.000 0.00 0.00 0.00 3.53
5410 6002 2.288948 CCATCCCATGTTGTGTGTTTGG 60.289 50.000 0.00 0.00 0.00 3.28
5411 6003 2.288948 CCCATCCCATGTTGTGTGTTTG 60.289 50.000 0.00 0.00 0.00 2.93
5412 6004 1.969923 CCCATCCCATGTTGTGTGTTT 59.030 47.619 0.00 0.00 0.00 2.83
5413 6005 1.631405 CCCATCCCATGTTGTGTGTT 58.369 50.000 0.00 0.00 0.00 3.32
5414 6006 0.899717 GCCCATCCCATGTTGTGTGT 60.900 55.000 0.00 0.00 0.00 3.72
5415 6007 1.892338 GCCCATCCCATGTTGTGTG 59.108 57.895 0.00 0.00 0.00 3.82
5416 6008 1.678635 CGCCCATCCCATGTTGTGT 60.679 57.895 0.00 0.00 0.00 3.72
5417 6009 0.752743 ATCGCCCATCCCATGTTGTG 60.753 55.000 0.00 0.00 0.00 3.33
5418 6010 0.033208 AATCGCCCATCCCATGTTGT 60.033 50.000 0.00 0.00 0.00 3.32
5419 6011 1.608590 GTAATCGCCCATCCCATGTTG 59.391 52.381 0.00 0.00 0.00 3.33
5420 6012 1.813862 CGTAATCGCCCATCCCATGTT 60.814 52.381 0.00 0.00 0.00 2.71
5421 6013 0.250295 CGTAATCGCCCATCCCATGT 60.250 55.000 0.00 0.00 0.00 3.21
5422 6014 0.250295 ACGTAATCGCCCATCCCATG 60.250 55.000 0.00 0.00 41.18 3.66
5423 6015 1.344065 TACGTAATCGCCCATCCCAT 58.656 50.000 0.00 0.00 41.18 4.00
5424 6016 1.001520 CATACGTAATCGCCCATCCCA 59.998 52.381 0.00 0.00 41.18 4.37
5425 6017 1.001633 ACATACGTAATCGCCCATCCC 59.998 52.381 0.00 0.00 41.18 3.85
5426 6018 2.450609 ACATACGTAATCGCCCATCC 57.549 50.000 0.00 0.00 41.18 3.51
5427 6019 4.801891 TCTAACATACGTAATCGCCCATC 58.198 43.478 0.00 0.00 41.18 3.51
5428 6020 4.859304 TCTAACATACGTAATCGCCCAT 57.141 40.909 0.00 0.00 41.18 4.00
5429 6021 4.652421 TTCTAACATACGTAATCGCCCA 57.348 40.909 0.00 0.00 41.18 5.36
5430 6022 6.535274 AATTTCTAACATACGTAATCGCCC 57.465 37.500 0.00 0.00 41.18 6.13
5431 6023 8.000435 GTGTAATTTCTAACATACGTAATCGCC 59.000 37.037 0.00 0.00 41.18 5.54
5432 6024 8.000435 GGTGTAATTTCTAACATACGTAATCGC 59.000 37.037 0.00 0.00 41.18 4.58
5433 6025 8.203346 CGGTGTAATTTCTAACATACGTAATCG 58.797 37.037 0.00 0.00 43.34 3.34
5434 6026 9.023967 ACGGTGTAATTTCTAACATACGTAATC 57.976 33.333 0.00 0.00 38.99 1.75
5435 6027 8.931385 ACGGTGTAATTTCTAACATACGTAAT 57.069 30.769 0.00 0.00 38.99 1.89
5436 6028 8.755696 AACGGTGTAATTTCTAACATACGTAA 57.244 30.769 0.00 0.00 39.47 3.18
5437 6029 8.755696 AAACGGTGTAATTTCTAACATACGTA 57.244 30.769 0.00 0.00 39.47 3.57
5438 6030 7.599998 AGAAACGGTGTAATTTCTAACATACGT 59.400 33.333 0.00 0.00 42.10 3.57
5439 6031 7.956558 AGAAACGGTGTAATTTCTAACATACG 58.043 34.615 0.00 0.00 42.10 3.06
5440 6032 8.928733 TGAGAAACGGTGTAATTTCTAACATAC 58.071 33.333 0.00 0.00 43.54 2.39
5441 6033 8.928733 GTGAGAAACGGTGTAATTTCTAACATA 58.071 33.333 8.67 0.00 43.54 2.29
5442 6034 7.094933 GGTGAGAAACGGTGTAATTTCTAACAT 60.095 37.037 13.62 0.00 43.78 2.71
5443 6035 6.203338 GGTGAGAAACGGTGTAATTTCTAACA 59.797 38.462 13.62 1.81 43.78 2.41
5444 6036 6.203338 TGGTGAGAAACGGTGTAATTTCTAAC 59.797 38.462 5.87 5.87 43.54 2.34
5445 6037 6.289834 TGGTGAGAAACGGTGTAATTTCTAA 58.710 36.000 0.00 0.00 43.54 2.10
5446 6038 5.856156 TGGTGAGAAACGGTGTAATTTCTA 58.144 37.500 0.00 0.00 43.54 2.10
5447 6039 4.710324 TGGTGAGAAACGGTGTAATTTCT 58.290 39.130 0.00 0.00 45.61 2.52
5448 6040 5.622770 ATGGTGAGAAACGGTGTAATTTC 57.377 39.130 0.00 0.00 35.46 2.17
5449 6041 6.469410 TCTATGGTGAGAAACGGTGTAATTT 58.531 36.000 0.00 0.00 0.00 1.82
5450 6042 6.045072 TCTATGGTGAGAAACGGTGTAATT 57.955 37.500 0.00 0.00 0.00 1.40
5451 6043 5.670792 TCTATGGTGAGAAACGGTGTAAT 57.329 39.130 0.00 0.00 0.00 1.89
5452 6044 5.186215 TCATCTATGGTGAGAAACGGTGTAA 59.814 40.000 0.00 0.00 0.00 2.41
5453 6045 4.707934 TCATCTATGGTGAGAAACGGTGTA 59.292 41.667 0.00 0.00 0.00 2.90
5454 6046 3.513912 TCATCTATGGTGAGAAACGGTGT 59.486 43.478 0.00 0.00 0.00 4.16
5455 6047 4.115516 CTCATCTATGGTGAGAAACGGTG 58.884 47.826 1.90 0.00 44.57 4.94
5456 6048 4.023980 TCTCATCTATGGTGAGAAACGGT 58.976 43.478 7.94 0.00 46.58 4.83
5457 6049 4.655762 TCTCATCTATGGTGAGAAACGG 57.344 45.455 7.94 0.00 46.58 4.44
5463 6055 6.945435 ACCATACTAGTCTCATCTATGGTGAG 59.055 42.308 19.00 1.69 43.46 3.51
5464 6056 6.853490 ACCATACTAGTCTCATCTATGGTGA 58.147 40.000 19.00 0.00 38.33 4.02
5465 6057 7.338196 CCTACCATACTAGTCTCATCTATGGTG 59.662 44.444 24.86 17.26 39.82 4.17
5466 6058 7.018751 ACCTACCATACTAGTCTCATCTATGGT 59.981 40.741 21.88 21.88 41.96 3.55
5467 6059 7.406916 ACCTACCATACTAGTCTCATCTATGG 58.593 42.308 14.42 14.42 0.00 2.74
5468 6060 8.871629 AACCTACCATACTAGTCTCATCTATG 57.128 38.462 0.00 0.00 0.00 2.23
5469 6061 8.670490 TGAACCTACCATACTAGTCTCATCTAT 58.330 37.037 0.00 0.00 0.00 1.98
5470 6062 8.042286 TGAACCTACCATACTAGTCTCATCTA 57.958 38.462 0.00 0.00 0.00 1.98
5471 6063 6.912426 TGAACCTACCATACTAGTCTCATCT 58.088 40.000 0.00 0.00 0.00 2.90
5472 6064 7.584122 TTGAACCTACCATACTAGTCTCATC 57.416 40.000 0.00 0.00 0.00 2.92
5473 6065 7.015682 CCATTGAACCTACCATACTAGTCTCAT 59.984 40.741 0.00 0.00 0.00 2.90
5474 6066 6.323996 CCATTGAACCTACCATACTAGTCTCA 59.676 42.308 0.00 0.00 0.00 3.27
5475 6067 6.550108 TCCATTGAACCTACCATACTAGTCTC 59.450 42.308 0.00 0.00 0.00 3.36
5476 6068 6.441222 TCCATTGAACCTACCATACTAGTCT 58.559 40.000 0.00 0.00 0.00 3.24
5477 6069 6.324254 ACTCCATTGAACCTACCATACTAGTC 59.676 42.308 0.00 0.00 0.00 2.59
5478 6070 6.098409 CACTCCATTGAACCTACCATACTAGT 59.902 42.308 0.00 0.00 0.00 2.57
5479 6071 6.098409 ACACTCCATTGAACCTACCATACTAG 59.902 42.308 0.00 0.00 0.00 2.57
5480 6072 5.962031 ACACTCCATTGAACCTACCATACTA 59.038 40.000 0.00 0.00 0.00 1.82
5481 6073 4.783227 ACACTCCATTGAACCTACCATACT 59.217 41.667 0.00 0.00 0.00 2.12
5482 6074 4.876107 CACACTCCATTGAACCTACCATAC 59.124 45.833 0.00 0.00 0.00 2.39
5483 6075 4.780554 TCACACTCCATTGAACCTACCATA 59.219 41.667 0.00 0.00 0.00 2.74
5484 6076 3.587061 TCACACTCCATTGAACCTACCAT 59.413 43.478 0.00 0.00 0.00 3.55
5485 6077 2.976185 TCACACTCCATTGAACCTACCA 59.024 45.455 0.00 0.00 0.00 3.25
5486 6078 3.600388 CTCACACTCCATTGAACCTACC 58.400 50.000 0.00 0.00 0.00 3.18
5487 6079 3.600388 CCTCACACTCCATTGAACCTAC 58.400 50.000 0.00 0.00 0.00 3.18
5488 6080 2.571653 CCCTCACACTCCATTGAACCTA 59.428 50.000 0.00 0.00 0.00 3.08
5489 6081 1.352352 CCCTCACACTCCATTGAACCT 59.648 52.381 0.00 0.00 0.00 3.50
5490 6082 1.073923 ACCCTCACACTCCATTGAACC 59.926 52.381 0.00 0.00 0.00 3.62
5491 6083 2.568623 ACCCTCACACTCCATTGAAC 57.431 50.000 0.00 0.00 0.00 3.18
5492 6084 2.571653 CCTACCCTCACACTCCATTGAA 59.428 50.000 0.00 0.00 0.00 2.69
5493 6085 2.187958 CCTACCCTCACACTCCATTGA 58.812 52.381 0.00 0.00 0.00 2.57
5494 6086 1.909302 ACCTACCCTCACACTCCATTG 59.091 52.381 0.00 0.00 0.00 2.82
5495 6087 2.305927 CAACCTACCCTCACACTCCATT 59.694 50.000 0.00 0.00 0.00 3.16
5496 6088 1.909302 CAACCTACCCTCACACTCCAT 59.091 52.381 0.00 0.00 0.00 3.41
5497 6089 1.348064 CAACCTACCCTCACACTCCA 58.652 55.000 0.00 0.00 0.00 3.86
5498 6090 1.275573 GACAACCTACCCTCACACTCC 59.724 57.143 0.00 0.00 0.00 3.85
5499 6091 2.249139 AGACAACCTACCCTCACACTC 58.751 52.381 0.00 0.00 0.00 3.51
5500 6092 2.400467 AGACAACCTACCCTCACACT 57.600 50.000 0.00 0.00 0.00 3.55
5501 6093 2.633481 AGAAGACAACCTACCCTCACAC 59.367 50.000 0.00 0.00 0.00 3.82
5502 6094 2.972348 AGAAGACAACCTACCCTCACA 58.028 47.619 0.00 0.00 0.00 3.58
5503 6095 4.353383 AAAGAAGACAACCTACCCTCAC 57.647 45.455 0.00 0.00 0.00 3.51
5504 6096 5.382664 AAAAAGAAGACAACCTACCCTCA 57.617 39.130 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.