Multiple sequence alignment - TraesCS1A01G406500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G406500 chr1A 100.000 2534 0 0 1 2534 569132212 569134745 0.000000e+00 4680
1 TraesCS1A01G406500 chr1D 89.583 2160 98 40 30 2122 474506226 474508325 0.000000e+00 2625
2 TraesCS1A01G406500 chr1D 88.591 298 31 2 2240 2534 474508355 474508652 2.400000e-95 359
3 TraesCS1A01G406500 chr1D 83.817 241 32 6 2270 2504 438211181 438210942 3.280000e-54 222
4 TraesCS1A01G406500 chr1B 89.867 1885 75 40 30 1875 659776722 659778529 0.000000e+00 2316
5 TraesCS1A01G406500 chr2B 83.333 252 31 10 2268 2510 801215340 801215589 3.280000e-54 222
6 TraesCS1A01G406500 chr2D 83.265 245 31 8 2268 2505 120561253 120561494 1.530000e-52 217
7 TraesCS1A01G406500 chr6D 83.058 242 32 7 2270 2504 25458712 25458473 7.100000e-51 211
8 TraesCS1A01G406500 chrUn 81.557 244 36 6 2268 2503 87230942 87230700 2.570000e-45 193
9 TraesCS1A01G406500 chrUn 100.000 61 0 0 2126 2186 45101104 45101044 2.060000e-21 113
10 TraesCS1A01G406500 chrUn 100.000 61 0 0 2126 2186 186164091 186164031 2.060000e-21 113
11 TraesCS1A01G406500 chrUn 100.000 61 0 0 2126 2186 209407147 209407087 2.060000e-21 113
12 TraesCS1A01G406500 chrUn 100.000 61 0 0 2126 2186 261512752 261512812 2.060000e-21 113
13 TraesCS1A01G406500 chrUn 100.000 61 0 0 2126 2186 365030825 365030885 2.060000e-21 113
14 TraesCS1A01G406500 chrUn 100.000 61 0 0 2126 2186 396261200 396261140 2.060000e-21 113
15 TraesCS1A01G406500 chrUn 100.000 61 0 0 2126 2186 404775213 404775273 2.060000e-21 113
16 TraesCS1A01G406500 chrUn 100.000 61 0 0 2126 2186 441157696 441157636 2.060000e-21 113
17 TraesCS1A01G406500 chr5B 81.818 242 32 10 2268 2504 663242396 663242162 2.570000e-45 193
18 TraesCS1A01G406500 chr4B 81.818 242 29 12 2270 2503 665819394 665819160 3.330000e-44 189
19 TraesCS1A01G406500 chr4D 82.096 229 32 6 2268 2489 474702330 474702556 1.200000e-43 187
20 TraesCS1A01G406500 chr4D 100.000 61 0 0 2126 2186 123351394 123351334 2.060000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G406500 chr1A 569132212 569134745 2533 False 4680 4680 100.000 1 2534 1 chr1A.!!$F1 2533
1 TraesCS1A01G406500 chr1D 474506226 474508652 2426 False 1492 2625 89.087 30 2534 2 chr1D.!!$F1 2504
2 TraesCS1A01G406500 chr1B 659776722 659778529 1807 False 2316 2316 89.867 30 1875 1 chr1B.!!$F1 1845

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
222 223 0.039617 CGAGGCAGGAGATGACGATC 60.04 60.0 0.0 0.0 44.27 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1967 2068 0.323633 TCCTACCGGGATGTCGTTCA 60.324 55.0 6.32 0.0 39.58 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.349503 TCAAGCCACCTGCCGCAT 62.350 61.111 0.00 0.00 42.71 4.73
18 19 3.818787 CAAGCCACCTGCCGCATC 61.819 66.667 0.00 0.00 42.71 3.91
19 20 4.039092 AAGCCACCTGCCGCATCT 62.039 61.111 0.00 0.00 42.71 2.90
20 21 3.984193 AAGCCACCTGCCGCATCTC 62.984 63.158 0.00 0.00 42.71 2.75
22 23 4.100084 CCACCTGCCGCATCTCCA 62.100 66.667 0.00 0.00 0.00 3.86
23 24 2.821366 CACCTGCCGCATCTCCAC 60.821 66.667 0.00 0.00 0.00 4.02
24 25 4.457496 ACCTGCCGCATCTCCACG 62.457 66.667 0.00 0.00 0.00 4.94
222 223 0.039617 CGAGGCAGGAGATGACGATC 60.040 60.000 0.00 0.00 44.27 3.69
425 446 0.296642 CGGCGCACGTACTTGTAATC 59.703 55.000 10.83 0.00 37.93 1.75
468 492 0.895559 TGCTTGGAGTGAGCTCGAGA 60.896 55.000 18.75 0.00 42.53 4.04
617 649 2.170607 CCACTCACCGTATTCCTTCCAT 59.829 50.000 0.00 0.00 0.00 3.41
618 650 3.458189 CACTCACCGTATTCCTTCCATC 58.542 50.000 0.00 0.00 0.00 3.51
619 651 3.104512 ACTCACCGTATTCCTTCCATCA 58.895 45.455 0.00 0.00 0.00 3.07
621 653 4.164221 ACTCACCGTATTCCTTCCATCATT 59.836 41.667 0.00 0.00 0.00 2.57
622 654 4.703897 TCACCGTATTCCTTCCATCATTC 58.296 43.478 0.00 0.00 0.00 2.67
624 656 3.458118 ACCGTATTCCTTCCATCATTCCA 59.542 43.478 0.00 0.00 0.00 3.53
625 657 4.080015 ACCGTATTCCTTCCATCATTCCAA 60.080 41.667 0.00 0.00 0.00 3.53
626 658 4.516698 CCGTATTCCTTCCATCATTCCAAG 59.483 45.833 0.00 0.00 0.00 3.61
627 659 4.516698 CGTATTCCTTCCATCATTCCAAGG 59.483 45.833 0.00 0.00 37.36 3.61
628 660 3.386932 TTCCTTCCATCATTCCAAGGG 57.613 47.619 0.00 0.00 36.75 3.95
629 661 2.572340 TCCTTCCATCATTCCAAGGGA 58.428 47.619 0.00 0.00 36.75 4.20
630 662 2.925653 TCCTTCCATCATTCCAAGGGAA 59.074 45.455 0.00 0.00 46.39 3.97
631 663 3.026694 CCTTCCATCATTCCAAGGGAAC 58.973 50.000 0.00 0.00 45.07 3.62
632 664 3.564133 CCTTCCATCATTCCAAGGGAACA 60.564 47.826 0.00 0.00 45.07 3.18
633 665 3.824001 TCCATCATTCCAAGGGAACAA 57.176 42.857 0.00 0.00 45.07 2.83
634 666 4.125124 TCCATCATTCCAAGGGAACAAA 57.875 40.909 0.00 0.00 45.07 2.83
635 667 3.831911 TCCATCATTCCAAGGGAACAAAC 59.168 43.478 0.00 0.00 45.07 2.93
636 668 3.577848 CCATCATTCCAAGGGAACAAACA 59.422 43.478 0.00 0.00 45.07 2.83
637 669 4.040217 CCATCATTCCAAGGGAACAAACAA 59.960 41.667 0.00 0.00 45.07 2.83
638 670 5.280113 CCATCATTCCAAGGGAACAAACAAT 60.280 40.000 0.00 0.00 45.07 2.71
639 671 6.070881 CCATCATTCCAAGGGAACAAACAATA 60.071 38.462 0.00 0.00 45.07 1.90
640 672 7.364939 CCATCATTCCAAGGGAACAAACAATAT 60.365 37.037 0.00 0.00 45.07 1.28
641 673 6.934056 TCATTCCAAGGGAACAAACAATATG 58.066 36.000 0.00 0.00 45.07 1.78
642 674 4.799564 TCCAAGGGAACAAACAATATGC 57.200 40.909 0.00 0.00 0.00 3.14
643 675 4.155709 TCCAAGGGAACAAACAATATGCA 58.844 39.130 0.00 0.00 0.00 3.96
644 676 4.220382 TCCAAGGGAACAAACAATATGCAG 59.780 41.667 0.00 0.00 0.00 4.41
645 677 4.497300 CAAGGGAACAAACAATATGCAGG 58.503 43.478 0.00 0.00 0.00 4.85
646 678 3.099141 AGGGAACAAACAATATGCAGGG 58.901 45.455 0.00 0.00 0.00 4.45
647 679 2.418609 GGGAACAAACAATATGCAGGGC 60.419 50.000 0.00 0.00 0.00 5.19
648 680 2.529151 GAACAAACAATATGCAGGGCG 58.471 47.619 0.00 0.00 0.00 6.13
649 681 1.544724 ACAAACAATATGCAGGGCGT 58.455 45.000 0.00 0.00 0.00 5.68
713 745 4.518278 TTTTGGATGCTATTAGCTGGGA 57.482 40.909 16.29 0.00 42.97 4.37
718 771 3.198635 GGATGCTATTAGCTGGGATGCTA 59.801 47.826 16.29 0.00 42.97 3.49
727 780 2.709934 AGCTGGGATGCTAGATTGATGT 59.290 45.455 0.56 0.00 42.10 3.06
743 796 7.975608 AGATTGATGTATGGATGTCATCTTCT 58.024 34.615 12.54 1.03 38.78 2.85
819 872 2.092753 AGCATTCTGATCACCGTCCATT 60.093 45.455 0.00 0.00 0.00 3.16
894 947 2.407361 CGTTTCCTACGTGATGACACAC 59.593 50.000 0.00 0.00 46.20 3.82
938 991 1.352352 CTCTTTTCTTCCCCTCTGCCA 59.648 52.381 0.00 0.00 0.00 4.92
941 994 2.999185 TTTCTTCCCCTCTGCCATTT 57.001 45.000 0.00 0.00 0.00 2.32
974 1035 0.175989 CAGAGCAGAGCAGAGCATCA 59.824 55.000 0.00 0.00 37.82 3.07
980 1042 2.096174 GCAGAGCAGAGCATCAAGAAAG 59.904 50.000 0.00 0.00 37.82 2.62
992 1054 0.514691 CAAGAAAGACTCAGCGCCAC 59.485 55.000 2.29 0.00 0.00 5.01
1084 1149 4.047125 CCCGGCCACACCCATTCT 62.047 66.667 2.24 0.00 33.26 2.40
1100 1165 0.838554 TTCTTCCCCATCCACGGTCA 60.839 55.000 0.00 0.00 0.00 4.02
1534 1599 3.222354 AAGGTCACCGTCGCCTGAC 62.222 63.158 11.11 11.11 41.91 3.51
1536 1601 3.681835 GTCACCGTCGCCTGACCT 61.682 66.667 9.17 0.00 42.37 3.85
1545 1610 2.328099 CGCCTGACCTTGACCTTGC 61.328 63.158 0.00 0.00 0.00 4.01
1546 1611 1.073897 GCCTGACCTTGACCTTGCT 59.926 57.895 0.00 0.00 0.00 3.91
1548 1613 1.239968 CCTGACCTTGACCTTGCTGC 61.240 60.000 0.00 0.00 0.00 5.25
1549 1614 0.250640 CTGACCTTGACCTTGCTGCT 60.251 55.000 0.00 0.00 0.00 4.24
1550 1615 1.002430 CTGACCTTGACCTTGCTGCTA 59.998 52.381 0.00 0.00 0.00 3.49
1553 1621 1.002544 ACCTTGACCTTGCTGCTACTC 59.997 52.381 0.00 0.00 0.00 2.59
1556 1624 2.231716 TGACCTTGCTGCTACTCCTA 57.768 50.000 0.00 0.00 0.00 2.94
1578 1650 6.876257 CCTACATTGCTACTAGGAATTCCATC 59.124 42.308 26.22 8.61 33.83 3.51
1650 1730 1.377725 CCGGCCAGTTGCAAGATCT 60.378 57.895 2.24 0.00 43.89 2.75
1678 1758 8.038944 TGCGTCCTTTATATACTCTGTTTCTTT 58.961 33.333 0.00 0.00 0.00 2.52
1723 1803 2.794981 CGACGCGTACCTGAATTCTGAT 60.795 50.000 13.97 0.00 0.00 2.90
1724 1804 2.535984 GACGCGTACCTGAATTCTGATG 59.464 50.000 13.97 2.10 0.00 3.07
1725 1805 2.165641 ACGCGTACCTGAATTCTGATGA 59.834 45.455 11.67 0.00 0.00 2.92
1726 1806 3.186909 CGCGTACCTGAATTCTGATGAA 58.813 45.455 13.45 0.00 36.54 2.57
1783 1863 5.943349 TGGTATGTAATTTTCTCGGGAGA 57.057 39.130 0.00 0.00 35.27 3.71
1807 1887 6.993079 AGAATGCATTACGATATGTACTGGA 58.007 36.000 12.97 0.00 38.18 3.86
1865 1945 4.038162 AGCCACTTGGAGTTCGATATACTC 59.962 45.833 7.13 7.13 41.00 2.59
1875 1955 6.293190 GGAGTTCGATATACTCTGTGACTGAG 60.293 46.154 16.54 16.54 41.37 3.35
1877 1957 5.993106 TCGATATACTCTGTGACTGAGTG 57.007 43.478 28.20 15.17 41.47 3.51
1878 1958 5.671493 TCGATATACTCTGTGACTGAGTGA 58.329 41.667 28.20 18.81 41.47 3.41
1880 1960 5.277586 CGATATACTCTGTGACTGAGTGACC 60.278 48.000 28.20 16.11 41.47 4.02
1881 1961 2.073252 ACTCTGTGACTGAGTGACCA 57.927 50.000 21.84 0.00 40.27 4.02
1882 1962 2.388735 ACTCTGTGACTGAGTGACCAA 58.611 47.619 21.84 0.00 40.27 3.67
1889 1974 1.802960 GACTGAGTGACCAATGCACAG 59.197 52.381 0.00 0.00 38.70 3.66
1905 2006 0.773644 ACAGGTCAGGTGCAGGAATT 59.226 50.000 0.00 0.00 0.00 2.17
1967 2068 0.037303 CCCTGACTGACCAATGCACT 59.963 55.000 0.00 0.00 0.00 4.40
1976 2077 1.806542 GACCAATGCACTGAACGACAT 59.193 47.619 0.00 0.00 0.00 3.06
1980 2081 0.740868 ATGCACTGAACGACATCCCG 60.741 55.000 0.00 0.00 0.00 5.14
1982 2083 1.292223 CACTGAACGACATCCCGGT 59.708 57.895 0.00 0.00 0.00 5.28
2003 2105 5.007682 GGTAGGATTGCTGTTTTCCAAGTA 58.992 41.667 0.00 0.00 31.65 2.24
2017 2119 8.519526 TGTTTTCCAAGTATATTGATCAACCAC 58.480 33.333 11.07 8.86 0.00 4.16
2036 2138 8.739039 TCAACCACAATATTTACTTTCATCAGG 58.261 33.333 0.00 0.00 0.00 3.86
2062 2164 5.199024 ACACACAATGTTTGCATGTACAT 57.801 34.783 1.41 1.41 38.98 2.29
2071 2173 5.080337 TGTTTGCATGTACATAAAGGGGAA 58.920 37.500 8.32 0.37 0.00 3.97
2078 2180 6.690460 GCATGTACATAAAGGGGAACATAGGA 60.690 42.308 8.32 0.00 0.00 2.94
2080 2182 5.727279 TGTACATAAAGGGGAACATAGGACA 59.273 40.000 0.00 0.00 0.00 4.02
2088 2190 2.224548 GGGAACATAGGACATACCCAGC 60.225 54.545 0.00 0.00 40.05 4.85
2122 2224 6.566187 GCGACTCATATCTAAAGAAGTAGCGA 60.566 42.308 0.00 0.00 0.00 4.93
2123 2225 6.793203 CGACTCATATCTAAAGAAGTAGCGAC 59.207 42.308 0.00 0.00 0.00 5.19
2124 2226 6.972722 ACTCATATCTAAAGAAGTAGCGACC 58.027 40.000 0.00 0.00 0.00 4.79
2125 2227 6.773685 ACTCATATCTAAAGAAGTAGCGACCT 59.226 38.462 0.00 0.00 0.00 3.85
2126 2228 7.937942 ACTCATATCTAAAGAAGTAGCGACCTA 59.062 37.037 0.00 0.00 0.00 3.08
2127 2229 8.687292 TCATATCTAAAGAAGTAGCGACCTAA 57.313 34.615 0.00 0.00 0.00 2.69
2128 2230 8.566260 TCATATCTAAAGAAGTAGCGACCTAAC 58.434 37.037 0.00 0.00 0.00 2.34
2129 2231 8.569641 CATATCTAAAGAAGTAGCGACCTAACT 58.430 37.037 0.00 0.00 0.00 2.24
2130 2232 9.790344 ATATCTAAAGAAGTAGCGACCTAACTA 57.210 33.333 0.00 0.00 0.00 2.24
2131 2233 7.313951 TCTAAAGAAGTAGCGACCTAACTAC 57.686 40.000 0.00 0.00 39.25 2.73
2132 2234 5.972107 AAAGAAGTAGCGACCTAACTACA 57.028 39.130 0.00 0.00 41.01 2.74
2133 2235 6.527057 AAAGAAGTAGCGACCTAACTACAT 57.473 37.500 0.00 0.00 41.01 2.29
2134 2236 6.527057 AAGAAGTAGCGACCTAACTACATT 57.473 37.500 0.00 0.00 41.01 2.71
2135 2237 6.134040 AGAAGTAGCGACCTAACTACATTC 57.866 41.667 0.00 0.00 41.01 2.67
2136 2238 5.887035 AGAAGTAGCGACCTAACTACATTCT 59.113 40.000 0.00 0.00 41.01 2.40
2137 2239 5.754543 AGTAGCGACCTAACTACATTCTC 57.245 43.478 0.00 0.00 41.01 2.87
2138 2240 5.191426 AGTAGCGACCTAACTACATTCTCA 58.809 41.667 0.00 0.00 41.01 3.27
2139 2241 4.373348 AGCGACCTAACTACATTCTCAC 57.627 45.455 0.00 0.00 0.00 3.51
2140 2242 3.762288 AGCGACCTAACTACATTCTCACA 59.238 43.478 0.00 0.00 0.00 3.58
2141 2243 4.402793 AGCGACCTAACTACATTCTCACAT 59.597 41.667 0.00 0.00 0.00 3.21
2142 2244 5.105310 AGCGACCTAACTACATTCTCACATT 60.105 40.000 0.00 0.00 0.00 2.71
2143 2245 5.581085 GCGACCTAACTACATTCTCACATTT 59.419 40.000 0.00 0.00 0.00 2.32
2144 2246 6.237861 GCGACCTAACTACATTCTCACATTTC 60.238 42.308 0.00 0.00 0.00 2.17
2145 2247 7.036220 CGACCTAACTACATTCTCACATTTCT 58.964 38.462 0.00 0.00 0.00 2.52
2146 2248 7.545965 CGACCTAACTACATTCTCACATTTCTT 59.454 37.037 0.00 0.00 0.00 2.52
2147 2249 9.220767 GACCTAACTACATTCTCACATTTCTTT 57.779 33.333 0.00 0.00 0.00 2.52
2148 2250 9.574516 ACCTAACTACATTCTCACATTTCTTTT 57.425 29.630 0.00 0.00 0.00 2.27
2171 2273 8.451687 TTTTTGATCTCATGACTTTTTATGCG 57.548 30.769 0.00 0.00 0.00 4.73
2172 2274 6.983474 TTGATCTCATGACTTTTTATGCGA 57.017 33.333 0.00 0.00 0.00 5.10
2173 2275 7.558161 TTGATCTCATGACTTTTTATGCGAT 57.442 32.000 0.00 0.00 32.98 4.58
2174 2276 7.182361 TGATCTCATGACTTTTTATGCGATC 57.818 36.000 9.18 9.18 42.00 3.69
2175 2277 5.641777 TCTCATGACTTTTTATGCGATCG 57.358 39.130 11.69 11.69 0.00 3.69
2176 2278 4.507756 TCTCATGACTTTTTATGCGATCGG 59.492 41.667 18.30 0.00 0.00 4.18
2177 2279 4.438148 TCATGACTTTTTATGCGATCGGA 58.562 39.130 18.30 15.79 0.00 4.55
2178 2280 4.873259 TCATGACTTTTTATGCGATCGGAA 59.127 37.500 14.89 0.00 0.00 4.30
2179 2281 5.352846 TCATGACTTTTTATGCGATCGGAAA 59.647 36.000 14.89 6.77 0.00 3.13
2180 2282 5.614923 TGACTTTTTATGCGATCGGAAAA 57.385 34.783 14.89 12.39 0.00 2.29
2181 2283 5.387279 TGACTTTTTATGCGATCGGAAAAC 58.613 37.500 14.89 0.00 0.00 2.43
2202 2304 2.226437 CGAATAGGGCATGTACAATGGC 59.774 50.000 17.63 17.63 42.96 4.40
2207 2309 3.848303 AGGGCATGTACAATGGCATTAT 58.152 40.909 23.27 3.89 45.13 1.28
2213 2315 6.430925 GGCATGTACAATGGCATTATCTTAGA 59.569 38.462 13.23 1.55 43.15 2.10
2215 2317 8.019669 GCATGTACAATGGCATTATCTTAGAAG 58.980 37.037 13.23 0.00 0.00 2.85
2218 2320 8.264347 TGTACAATGGCATTATCTTAGAAGTGA 58.736 33.333 13.23 0.00 0.00 3.41
2222 2324 6.048732 TGGCATTATCTTAGAAGTGACACA 57.951 37.500 8.59 0.00 0.00 3.72
2223 2325 6.653020 TGGCATTATCTTAGAAGTGACACAT 58.347 36.000 8.59 0.00 0.00 3.21
2224 2326 7.791029 TGGCATTATCTTAGAAGTGACACATA 58.209 34.615 8.59 0.00 0.00 2.29
2225 2327 7.928167 TGGCATTATCTTAGAAGTGACACATAG 59.072 37.037 8.59 0.00 0.00 2.23
2226 2328 8.144478 GGCATTATCTTAGAAGTGACACATAGA 58.856 37.037 8.59 3.37 0.00 1.98
2227 2329 9.534565 GCATTATCTTAGAAGTGACACATAGAA 57.465 33.333 8.59 0.00 0.00 2.10
2231 2333 8.588290 ATCTTAGAAGTGACACATAGAAGTCT 57.412 34.615 8.59 1.69 35.81 3.24
2232 2334 9.688091 ATCTTAGAAGTGACACATAGAAGTCTA 57.312 33.333 8.59 0.83 35.81 2.59
2233 2335 9.516546 TCTTAGAAGTGACACATAGAAGTCTAA 57.483 33.333 8.59 7.75 35.81 2.10
2261 2363 1.547372 GAGTGCCACGTAGAACCCTAA 59.453 52.381 0.00 0.00 0.00 2.69
2265 2367 3.187842 GTGCCACGTAGAACCCTAAAAAG 59.812 47.826 0.00 0.00 0.00 2.27
2274 2376 4.399219 AGAACCCTAAAAAGAAGGAGTGC 58.601 43.478 0.00 0.00 36.08 4.40
2276 2378 2.445525 ACCCTAAAAAGAAGGAGTGCCA 59.554 45.455 0.00 0.00 36.08 4.92
2291 2393 3.871594 GAGTGCCACGTAGAATAAATGCT 59.128 43.478 0.00 0.00 0.00 3.79
2295 2397 4.119862 GCCACGTAGAATAAATGCTGAGA 58.880 43.478 0.00 0.00 0.00 3.27
2298 2400 5.178252 CCACGTAGAATAAATGCTGAGATGG 59.822 44.000 0.00 0.00 0.00 3.51
2388 2490 8.862325 TGTCTCACCATGTTTTTATGAATAGT 57.138 30.769 0.00 0.00 0.00 2.12
2429 2533 5.509840 GGCTAAGAATCCATCGTAGACATGT 60.510 44.000 0.00 0.00 44.77 3.21
2459 2563 8.925788 TTTTGTTATTTCAAAATTACATGCGC 57.074 26.923 0.00 0.00 40.73 6.09
2460 2564 7.643528 TTGTTATTTCAAAATTACATGCGCA 57.356 28.000 14.96 14.96 37.64 6.09
2466 2571 6.926280 TTCAAAATTACATGCGCACTTAAG 57.074 33.333 14.90 0.00 0.00 1.85
2471 2576 9.236691 CAAAATTACATGCGCACTTAAGATAAT 57.763 29.630 14.90 6.51 0.00 1.28
2475 2580 6.530913 ACATGCGCACTTAAGATAATACTG 57.469 37.500 14.90 3.94 0.00 2.74
2479 2584 6.338146 TGCGCACTTAAGATAATACTGTCTT 58.662 36.000 5.66 0.00 36.94 3.01
2482 2587 7.846592 GCGCACTTAAGATAATACTGTCTTTTC 59.153 37.037 10.09 0.00 35.00 2.29
2493 2598 9.832445 ATAATACTGTCTTTTCAACCATCGTAT 57.168 29.630 0.00 0.00 0.00 3.06
2519 2624 1.736681 CTTAGCAAGGCTGTCAGCTTC 59.263 52.381 23.68 8.80 41.99 3.86
2520 2625 0.686789 TAGCAAGGCTGTCAGCTTCA 59.313 50.000 23.68 1.06 41.99 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.349503 ATGCGGCAGGTGGCTTGA 62.350 61.111 9.25 0.00 44.01 3.02
1 2 3.818787 GATGCGGCAGGTGGCTTG 61.819 66.667 9.25 0.00 44.01 4.01
2 3 3.984193 GAGATGCGGCAGGTGGCTT 62.984 63.158 9.25 0.00 44.01 4.35
3 4 4.479993 GAGATGCGGCAGGTGGCT 62.480 66.667 9.25 0.30 44.01 4.75
5 6 4.100084 TGGAGATGCGGCAGGTGG 62.100 66.667 9.25 0.00 0.00 4.61
6 7 2.821366 GTGGAGATGCGGCAGGTG 60.821 66.667 9.25 0.00 0.00 4.00
7 8 4.457496 CGTGGAGATGCGGCAGGT 62.457 66.667 9.25 0.00 0.00 4.00
9 10 4.147449 TCCGTGGAGATGCGGCAG 62.147 66.667 9.25 0.00 46.79 4.85
10 11 4.451150 GTCCGTGGAGATGCGGCA 62.451 66.667 4.58 4.58 46.79 5.69
14 15 4.451150 TGGCGTCCGTGGAGATGC 62.451 66.667 0.00 0.00 46.13 3.91
15 16 2.509336 GTGGCGTCCGTGGAGATG 60.509 66.667 0.00 0.00 0.00 2.90
16 17 4.129737 CGTGGCGTCCGTGGAGAT 62.130 66.667 0.00 0.00 0.00 2.75
357 365 3.200593 CCACAGCGAGCATCAGCC 61.201 66.667 0.00 0.00 43.56 4.85
425 446 0.179111 TATCAACCCAAGCGCGAGAG 60.179 55.000 12.10 0.00 0.00 3.20
468 492 1.435256 ACACTAGACCAAACCCAGCT 58.565 50.000 0.00 0.00 0.00 4.24
617 649 6.574073 GCATATTGTTTGTTCCCTTGGAATGA 60.574 38.462 0.00 0.00 44.04 2.57
618 650 5.581874 GCATATTGTTTGTTCCCTTGGAATG 59.418 40.000 0.00 0.00 44.04 2.67
619 651 5.248020 TGCATATTGTTTGTTCCCTTGGAAT 59.752 36.000 0.00 0.00 44.04 3.01
621 653 4.155709 TGCATATTGTTTGTTCCCTTGGA 58.844 39.130 0.00 0.00 0.00 3.53
622 654 4.497300 CTGCATATTGTTTGTTCCCTTGG 58.503 43.478 0.00 0.00 0.00 3.61
624 656 3.515104 CCCTGCATATTGTTTGTTCCCTT 59.485 43.478 0.00 0.00 0.00 3.95
625 657 3.099141 CCCTGCATATTGTTTGTTCCCT 58.901 45.455 0.00 0.00 0.00 4.20
626 658 2.418609 GCCCTGCATATTGTTTGTTCCC 60.419 50.000 0.00 0.00 0.00 3.97
627 659 2.735126 CGCCCTGCATATTGTTTGTTCC 60.735 50.000 0.00 0.00 0.00 3.62
628 660 2.094752 ACGCCCTGCATATTGTTTGTTC 60.095 45.455 0.00 0.00 0.00 3.18
629 661 1.892474 ACGCCCTGCATATTGTTTGTT 59.108 42.857 0.00 0.00 0.00 2.83
630 662 1.472480 GACGCCCTGCATATTGTTTGT 59.528 47.619 0.00 0.00 0.00 2.83
631 663 1.531677 CGACGCCCTGCATATTGTTTG 60.532 52.381 0.00 0.00 0.00 2.93
632 664 0.732571 CGACGCCCTGCATATTGTTT 59.267 50.000 0.00 0.00 0.00 2.83
633 665 0.107897 TCGACGCCCTGCATATTGTT 60.108 50.000 0.00 0.00 0.00 2.83
634 666 0.106708 ATCGACGCCCTGCATATTGT 59.893 50.000 0.00 0.00 0.00 2.71
635 667 0.792640 GATCGACGCCCTGCATATTG 59.207 55.000 0.00 0.00 0.00 1.90
636 668 0.392706 TGATCGACGCCCTGCATATT 59.607 50.000 0.00 0.00 0.00 1.28
637 669 0.392706 TTGATCGACGCCCTGCATAT 59.607 50.000 0.00 0.00 0.00 1.78
638 670 0.392706 ATTGATCGACGCCCTGCATA 59.607 50.000 0.00 0.00 0.00 3.14
639 671 0.464373 AATTGATCGACGCCCTGCAT 60.464 50.000 0.00 0.00 0.00 3.96
640 672 1.078497 AATTGATCGACGCCCTGCA 60.078 52.632 0.00 0.00 0.00 4.41
641 673 1.353103 CAATTGATCGACGCCCTGC 59.647 57.895 0.00 0.00 0.00 4.85
642 674 1.353103 GCAATTGATCGACGCCCTG 59.647 57.895 10.34 0.00 0.00 4.45
643 675 1.078497 TGCAATTGATCGACGCCCT 60.078 52.632 10.34 0.00 0.00 5.19
644 676 1.353103 CTGCAATTGATCGACGCCC 59.647 57.895 10.34 0.00 0.00 6.13
645 677 0.026803 GACTGCAATTGATCGACGCC 59.973 55.000 10.34 0.00 0.00 5.68
646 678 1.002366 AGACTGCAATTGATCGACGC 58.998 50.000 10.34 0.05 0.00 5.19
647 679 1.253800 CGAGACTGCAATTGATCGACG 59.746 52.381 10.34 10.29 32.13 5.12
648 680 1.005557 GCGAGACTGCAATTGATCGAC 60.006 52.381 10.34 3.65 32.13 4.20
649 681 1.280982 GCGAGACTGCAATTGATCGA 58.719 50.000 10.34 0.00 32.13 3.59
695 727 2.290514 GCATCCCAGCTAATAGCATCCA 60.291 50.000 15.28 0.00 45.56 3.41
703 735 5.013913 ACATCAATCTAGCATCCCAGCTAAT 59.986 40.000 0.00 0.00 45.69 1.73
713 745 7.012661 TGACATCCATACATCAATCTAGCAT 57.987 36.000 0.00 0.00 0.00 3.79
718 771 7.975608 AGAAGATGACATCCATACATCAATCT 58.024 34.615 11.92 0.00 41.64 2.40
727 780 6.319658 GCAAAAGGAAGAAGATGACATCCATA 59.680 38.462 11.92 0.00 35.17 2.74
743 796 4.272489 AGAATCGATCCATGCAAAAGGAA 58.728 39.130 9.57 0.00 37.48 3.36
799 852 1.959042 ATGGACGGTGATCAGAATGC 58.041 50.000 0.00 0.00 34.76 3.56
884 937 8.311395 AGATAAGATAAGAAGGTGTGTCATCA 57.689 34.615 0.00 0.00 0.00 3.07
885 938 9.255304 GAAGATAAGATAAGAAGGTGTGTCATC 57.745 37.037 0.00 0.00 0.00 2.92
886 939 7.923344 CGAAGATAAGATAAGAAGGTGTGTCAT 59.077 37.037 0.00 0.00 0.00 3.06
894 947 3.362237 CGCGCGAAGATAAGATAAGAAGG 59.638 47.826 28.94 0.00 0.00 3.46
938 991 1.003839 TGCGCTCGGAGTTGGAAAT 60.004 52.632 9.73 0.00 0.00 2.17
941 994 2.989253 TCTGCGCTCGGAGTTGGA 60.989 61.111 9.73 0.39 35.04 3.53
967 1028 2.348059 CGCTGAGTCTTTCTTGATGCTC 59.652 50.000 0.00 0.00 0.00 4.26
974 1035 0.946221 CGTGGCGCTGAGTCTTTCTT 60.946 55.000 7.64 0.00 0.00 2.52
996 1058 4.133796 GCGGTGGAAGCCATTGCC 62.134 66.667 0.00 0.00 38.69 4.52
997 1059 3.056313 GAGCGGTGGAAGCCATTGC 62.056 63.158 0.00 0.00 35.28 3.56
998 1060 1.372087 GAGAGCGGTGGAAGCCATTG 61.372 60.000 0.00 0.00 35.28 2.82
999 1061 1.078143 GAGAGCGGTGGAAGCCATT 60.078 57.895 0.00 0.00 35.28 3.16
1084 1149 2.598787 GGTGACCGTGGATGGGGAA 61.599 63.158 0.00 0.00 0.00 3.97
1534 1599 1.677217 GGAGTAGCAGCAAGGTCAAGG 60.677 57.143 0.00 0.00 0.00 3.61
1536 1601 1.352083 AGGAGTAGCAGCAAGGTCAA 58.648 50.000 0.00 0.00 0.00 3.18
1545 1610 4.927978 AGTAGCAATGTAGGAGTAGCAG 57.072 45.455 0.00 0.00 0.00 4.24
1546 1611 4.827835 CCTAGTAGCAATGTAGGAGTAGCA 59.172 45.833 0.00 0.00 36.19 3.49
1548 1613 7.768807 ATTCCTAGTAGCAATGTAGGAGTAG 57.231 40.000 0.00 0.00 42.60 2.57
1549 1614 7.232941 GGAATTCCTAGTAGCAATGTAGGAGTA 59.767 40.741 17.73 0.00 42.60 2.59
1550 1615 6.042208 GGAATTCCTAGTAGCAATGTAGGAGT 59.958 42.308 17.73 0.00 42.60 3.85
1553 1621 6.174720 TGGAATTCCTAGTAGCAATGTAGG 57.825 41.667 24.73 0.00 35.53 3.18
1556 1624 6.252599 TGATGGAATTCCTAGTAGCAATGT 57.747 37.500 24.73 0.00 36.82 2.71
1578 1650 8.359060 TCGACAAGGAAAATTTTGGTAAAATG 57.641 30.769 8.47 0.85 40.05 2.32
1650 1730 8.038944 AGAAACAGAGTATATAAAGGACGCAAA 58.961 33.333 0.00 0.00 0.00 3.68
1690 1770 0.654683 ACGCGTCGTACTGGAGATAC 59.345 55.000 5.58 0.00 38.73 2.24
1705 1785 2.809446 TCATCAGAATTCAGGTACGCG 58.191 47.619 3.53 3.53 0.00 6.01
1774 1854 2.034685 CGTAATGCATTCTCTCCCGAGA 59.965 50.000 16.86 0.00 44.32 4.04
1778 1858 5.482908 ACATATCGTAATGCATTCTCTCCC 58.517 41.667 16.86 0.00 0.00 4.30
1779 1859 7.274468 CAGTACATATCGTAATGCATTCTCTCC 59.726 40.741 16.86 0.00 39.13 3.71
1783 1863 6.993079 TCCAGTACATATCGTAATGCATTCT 58.007 36.000 16.86 0.00 43.31 2.40
1865 1945 1.802960 GCATTGGTCACTCAGTCACAG 59.197 52.381 0.00 0.00 0.00 3.66
1878 1958 0.538057 CACCTGACCTGTGCATTGGT 60.538 55.000 12.51 12.51 39.60 3.67
1905 2006 1.742831 AGCTCGCGGAATTATTTTGCA 59.257 42.857 6.13 0.00 0.00 4.08
1908 2009 3.181500 GGTTGAGCTCGCGGAATTATTTT 60.181 43.478 6.13 0.00 0.00 1.82
1909 2010 2.354821 GGTTGAGCTCGCGGAATTATTT 59.645 45.455 6.13 0.00 0.00 1.40
1911 2012 1.583054 GGTTGAGCTCGCGGAATTAT 58.417 50.000 6.13 0.00 0.00 1.28
1915 2016 4.735132 CCGGTTGAGCTCGCGGAA 62.735 66.667 6.13 0.00 0.00 4.30
1920 2021 1.393539 CATTGTTACCGGTTGAGCTCG 59.606 52.381 15.04 0.00 0.00 5.03
1922 2023 1.165270 GCATTGTTACCGGTTGAGCT 58.835 50.000 15.04 0.00 0.00 4.09
1967 2068 0.323633 TCCTACCGGGATGTCGTTCA 60.324 55.000 6.32 0.00 39.58 3.18
1980 2081 3.826729 ACTTGGAAAACAGCAATCCTACC 59.173 43.478 0.00 0.00 34.24 3.18
1982 2083 8.902806 CAATATACTTGGAAAACAGCAATCCTA 58.097 33.333 0.00 0.00 34.24 2.94
2025 2127 5.913137 TTGTGTGTTTTCCTGATGAAAGT 57.087 34.783 0.00 0.00 43.57 2.66
2027 2129 6.219417 ACATTGTGTGTTTTCCTGATGAAA 57.781 33.333 0.00 0.00 38.01 2.69
2062 2164 4.661709 GGGTATGTCCTATGTTCCCCTTTA 59.338 45.833 0.00 0.00 36.25 1.85
2071 2173 2.496679 AGGCTGGGTATGTCCTATGT 57.503 50.000 0.00 0.00 36.25 2.29
2088 2190 7.872993 TCTTTAGATATGAGTCGCCATTTTAGG 59.127 37.037 0.00 0.00 0.00 2.69
2099 2201 7.040961 AGGTCGCTACTTCTTTAGATATGAGTC 60.041 40.741 0.00 0.00 0.00 3.36
2102 2204 8.566260 GTTAGGTCGCTACTTCTTTAGATATGA 58.434 37.037 0.00 0.00 0.00 2.15
2122 2224 9.574516 AAAAGAAATGTGAGAATGTAGTTAGGT 57.425 29.630 0.00 0.00 0.00 3.08
2146 2248 8.296000 TCGCATAAAAAGTCATGAGATCAAAAA 58.704 29.630 0.00 0.00 0.00 1.94
2147 2249 7.815641 TCGCATAAAAAGTCATGAGATCAAAA 58.184 30.769 0.00 0.00 0.00 2.44
2148 2250 7.376435 TCGCATAAAAAGTCATGAGATCAAA 57.624 32.000 0.00 0.00 0.00 2.69
2149 2251 6.983474 TCGCATAAAAAGTCATGAGATCAA 57.017 33.333 0.00 0.00 0.00 2.57
2151 2253 6.295110 CGATCGCATAAAAAGTCATGAGATC 58.705 40.000 0.26 14.48 46.42 2.75
2152 2254 5.178252 CCGATCGCATAAAAAGTCATGAGAT 59.822 40.000 10.32 1.24 42.17 2.75
2153 2255 4.507756 CCGATCGCATAAAAAGTCATGAGA 59.492 41.667 10.32 0.00 35.80 3.27
2154 2256 4.507756 TCCGATCGCATAAAAAGTCATGAG 59.492 41.667 10.32 0.00 0.00 2.90
2155 2257 4.438148 TCCGATCGCATAAAAAGTCATGA 58.562 39.130 10.32 0.00 0.00 3.07
2156 2258 4.794248 TCCGATCGCATAAAAAGTCATG 57.206 40.909 10.32 0.00 0.00 3.07
2157 2259 5.811399 TTTCCGATCGCATAAAAAGTCAT 57.189 34.783 10.32 0.00 0.00 3.06
2158 2260 5.387279 GTTTTCCGATCGCATAAAAAGTCA 58.613 37.500 10.32 0.00 0.00 3.41
2159 2261 4.490890 CGTTTTCCGATCGCATAAAAAGTC 59.509 41.667 10.32 4.17 39.56 3.01
2160 2262 4.152759 TCGTTTTCCGATCGCATAAAAAGT 59.847 37.500 21.37 0.00 41.60 2.66
2161 2263 4.643953 TCGTTTTCCGATCGCATAAAAAG 58.356 39.130 10.32 16.13 41.60 2.27
2162 2264 4.665281 TCGTTTTCCGATCGCATAAAAA 57.335 36.364 10.32 10.16 41.60 1.94
2163 2265 4.665281 TTCGTTTTCCGATCGCATAAAA 57.335 36.364 10.32 12.52 46.75 1.52
2164 2266 4.868450 ATTCGTTTTCCGATCGCATAAA 57.132 36.364 10.32 6.99 46.75 1.40
2165 2267 4.446385 CCTATTCGTTTTCCGATCGCATAA 59.554 41.667 10.32 0.32 46.75 1.90
2166 2268 3.985279 CCTATTCGTTTTCCGATCGCATA 59.015 43.478 10.32 0.00 46.75 3.14
2167 2269 2.800544 CCTATTCGTTTTCCGATCGCAT 59.199 45.455 10.32 0.00 46.75 4.73
2168 2270 2.198406 CCTATTCGTTTTCCGATCGCA 58.802 47.619 10.32 0.00 46.75 5.10
2169 2271 1.525619 CCCTATTCGTTTTCCGATCGC 59.474 52.381 10.32 0.00 46.75 4.58
2170 2272 1.525619 GCCCTATTCGTTTTCCGATCG 59.474 52.381 8.51 8.51 46.75 3.69
2171 2273 2.557317 TGCCCTATTCGTTTTCCGATC 58.443 47.619 0.00 0.00 46.75 3.69
2172 2274 2.702592 TGCCCTATTCGTTTTCCGAT 57.297 45.000 0.00 0.00 46.75 4.18
2173 2275 2.285083 CATGCCCTATTCGTTTTCCGA 58.715 47.619 0.00 0.00 45.66 4.55
2174 2276 2.014128 ACATGCCCTATTCGTTTTCCG 58.986 47.619 0.00 0.00 38.13 4.30
2175 2277 3.942748 TGTACATGCCCTATTCGTTTTCC 59.057 43.478 0.00 0.00 0.00 3.13
2176 2278 5.554822 TTGTACATGCCCTATTCGTTTTC 57.445 39.130 0.00 0.00 0.00 2.29
2177 2279 5.163561 CCATTGTACATGCCCTATTCGTTTT 60.164 40.000 0.00 0.00 0.00 2.43
2178 2280 4.338118 CCATTGTACATGCCCTATTCGTTT 59.662 41.667 0.00 0.00 0.00 3.60
2179 2281 3.882888 CCATTGTACATGCCCTATTCGTT 59.117 43.478 0.00 0.00 0.00 3.85
2180 2282 3.476552 CCATTGTACATGCCCTATTCGT 58.523 45.455 0.00 0.00 0.00 3.85
2181 2283 2.226437 GCCATTGTACATGCCCTATTCG 59.774 50.000 0.00 0.00 0.00 3.34
2184 2286 3.530928 ATGCCATTGTACATGCCCTAT 57.469 42.857 0.00 0.00 0.00 2.57
2207 2309 9.516546 TTAGACTTCTATGTGTCACTTCTAAGA 57.483 33.333 4.27 0.00 35.81 2.10
2235 2337 2.876550 GTTCTACGTGGCACTCCTTTTT 59.123 45.455 16.72 0.00 0.00 1.94
2236 2338 2.490991 GTTCTACGTGGCACTCCTTTT 58.509 47.619 16.72 0.00 0.00 2.27
2237 2339 1.270678 GGTTCTACGTGGCACTCCTTT 60.271 52.381 16.72 0.00 0.00 3.11
2238 2340 0.320697 GGTTCTACGTGGCACTCCTT 59.679 55.000 16.72 0.00 0.00 3.36
2239 2341 1.542187 GGGTTCTACGTGGCACTCCT 61.542 60.000 16.72 0.21 0.00 3.69
2240 2342 1.079336 GGGTTCTACGTGGCACTCC 60.079 63.158 16.72 7.94 0.00 3.85
2241 2343 1.180029 TAGGGTTCTACGTGGCACTC 58.820 55.000 16.72 0.00 0.00 3.51
2242 2344 1.636148 TTAGGGTTCTACGTGGCACT 58.364 50.000 16.72 5.47 0.00 4.40
2243 2345 2.460757 TTTAGGGTTCTACGTGGCAC 57.539 50.000 7.79 7.79 0.00 5.01
2244 2346 3.071312 TCTTTTTAGGGTTCTACGTGGCA 59.929 43.478 0.00 0.00 0.00 4.92
2245 2347 3.667360 TCTTTTTAGGGTTCTACGTGGC 58.333 45.455 0.00 0.00 0.00 5.01
2246 2348 4.694037 CCTTCTTTTTAGGGTTCTACGTGG 59.306 45.833 0.00 0.00 0.00 4.94
2247 2349 5.544650 TCCTTCTTTTTAGGGTTCTACGTG 58.455 41.667 0.00 0.00 33.41 4.49
2248 2350 5.306419 ACTCCTTCTTTTTAGGGTTCTACGT 59.694 40.000 0.00 0.00 33.41 3.57
2249 2351 5.638234 CACTCCTTCTTTTTAGGGTTCTACG 59.362 44.000 0.00 0.00 33.41 3.51
2261 2363 2.367567 TCTACGTGGCACTCCTTCTTTT 59.632 45.455 16.72 0.00 0.00 2.27
2265 2367 2.674796 ATTCTACGTGGCACTCCTTC 57.325 50.000 16.72 0.00 0.00 3.46
2274 2376 5.178252 CCATCTCAGCATTTATTCTACGTGG 59.822 44.000 0.00 0.00 0.00 4.94
2276 2378 6.040955 TCTCCATCTCAGCATTTATTCTACGT 59.959 38.462 0.00 0.00 0.00 3.57
2396 2498 7.707104 ACGATGGATTCTTAGCCTTATTTTTG 58.293 34.615 0.00 0.00 0.00 2.44
2397 2499 7.881775 ACGATGGATTCTTAGCCTTATTTTT 57.118 32.000 0.00 0.00 0.00 1.94
2400 2502 7.015292 TGTCTACGATGGATTCTTAGCCTTATT 59.985 37.037 0.00 0.00 0.00 1.40
2405 2507 4.585955 TGTCTACGATGGATTCTTAGCC 57.414 45.455 0.00 0.00 0.00 3.93
2443 2547 6.673106 TCTTAAGTGCGCATGTAATTTTGAA 58.327 32.000 15.91 0.00 0.00 2.69
2447 2551 9.878599 GTATTATCTTAAGTGCGCATGTAATTT 57.121 29.630 15.91 7.99 0.00 1.82
2466 2571 8.197988 ACGATGGTTGAAAAGACAGTATTATC 57.802 34.615 0.00 0.00 0.00 1.75
2471 2576 7.223971 GCATATACGATGGTTGAAAAGACAGTA 59.776 37.037 0.00 0.00 0.00 2.74
2475 2580 5.277828 GGGCATATACGATGGTTGAAAAGAC 60.278 44.000 0.00 0.00 0.00 3.01
2479 2584 4.431416 AGGGCATATACGATGGTTGAAA 57.569 40.909 0.00 0.00 0.00 2.69
2482 2587 3.684788 GCTAAGGGCATATACGATGGTTG 59.315 47.826 0.00 0.00 41.35 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.