Multiple sequence alignment - TraesCS1A01G405800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1A01G405800 | chr1A | 100.000 | 5781 | 0 | 0 | 1 | 5781 | 568542689 | 568548469 | 0.000000e+00 | 10676.0 |
1 | TraesCS1A01G405800 | chr1A | 79.919 | 493 | 58 | 30 | 1034 | 1505 | 568413221 | 568413693 | 2.010000e-84 | 324.0 |
2 | TraesCS1A01G405800 | chr1A | 90.040 | 251 | 15 | 4 | 2032 | 2274 | 508959045 | 508958797 | 3.360000e-82 | 316.0 |
3 | TraesCS1A01G405800 | chr1A | 83.505 | 194 | 27 | 2 | 4872 | 5060 | 568552827 | 568553020 | 5.950000e-40 | 176.0 |
4 | TraesCS1A01G405800 | chr1A | 88.596 | 114 | 12 | 1 | 5327 | 5439 | 30331134 | 30331247 | 2.810000e-28 | 137.0 |
5 | TraesCS1A01G405800 | chr1B | 89.829 | 3215 | 219 | 61 | 1916 | 5085 | 659555642 | 659558793 | 0.000000e+00 | 4026.0 |
6 | TraesCS1A01G405800 | chr1B | 85.255 | 1431 | 136 | 41 | 298 | 1711 | 659554262 | 659555634 | 0.000000e+00 | 1404.0 |
7 | TraesCS1A01G405800 | chr1B | 86.210 | 1124 | 95 | 33 | 839 | 1939 | 79977919 | 79979005 | 0.000000e+00 | 1162.0 |
8 | TraesCS1A01G405800 | chr1B | 89.677 | 310 | 23 | 3 | 5472 | 5780 | 659558843 | 659559144 | 2.530000e-103 | 387.0 |
9 | TraesCS1A01G405800 | chr1B | 78.795 | 448 | 75 | 18 | 1074 | 1505 | 659377912 | 659378355 | 3.410000e-72 | 283.0 |
10 | TraesCS1A01G405800 | chr1B | 92.857 | 56 | 4 | 0 | 2188 | 2243 | 667681351 | 667681296 | 1.340000e-11 | 82.4 |
11 | TraesCS1A01G405800 | chr1D | 94.307 | 1985 | 84 | 9 | 3777 | 5753 | 474111132 | 474113095 | 0.000000e+00 | 3013.0 |
12 | TraesCS1A01G405800 | chr1D | 90.805 | 2186 | 133 | 34 | 646 | 2804 | 474052518 | 474054662 | 0.000000e+00 | 2861.0 |
13 | TraesCS1A01G405800 | chr1D | 88.254 | 1260 | 111 | 27 | 3777 | 5016 | 474055682 | 474056924 | 0.000000e+00 | 1472.0 |
14 | TraesCS1A01G405800 | chr1D | 91.707 | 832 | 52 | 13 | 2948 | 3776 | 474054775 | 474055592 | 0.000000e+00 | 1138.0 |
15 | TraesCS1A01G405800 | chr1D | 84.864 | 588 | 64 | 15 | 2703 | 3283 | 474110316 | 474110885 | 2.340000e-158 | 569.0 |
16 | TraesCS1A01G405800 | chr1D | 79.116 | 498 | 60 | 34 | 1034 | 1505 | 474010347 | 474010826 | 2.620000e-78 | 303.0 |
17 | TraesCS1A01G405800 | chr1D | 95.495 | 111 | 4 | 1 | 3666 | 3776 | 474110968 | 474111077 | 5.950000e-40 | 176.0 |
18 | TraesCS1A01G405800 | chr5A | 81.889 | 2170 | 301 | 54 | 1912 | 4046 | 673556718 | 673558830 | 0.000000e+00 | 1746.0 |
19 | TraesCS1A01G405800 | chr5A | 83.388 | 1216 | 149 | 35 | 2843 | 4039 | 673691251 | 673692432 | 0.000000e+00 | 1077.0 |
20 | TraesCS1A01G405800 | chr5A | 86.364 | 550 | 62 | 12 | 1555 | 2098 | 49959479 | 49960021 | 6.450000e-164 | 588.0 |
21 | TraesCS1A01G405800 | chr5A | 80.828 | 725 | 105 | 25 | 4078 | 4787 | 673558932 | 673559637 | 6.590000e-149 | 538.0 |
22 | TraesCS1A01G405800 | chr5A | 79.804 | 713 | 97 | 31 | 4091 | 4783 | 673692693 | 673693378 | 5.240000e-130 | 475.0 |
23 | TraesCS1A01G405800 | chr5A | 82.781 | 453 | 53 | 18 | 1389 | 1836 | 49517565 | 49517997 | 1.180000e-101 | 381.0 |
24 | TraesCS1A01G405800 | chr5A | 86.441 | 354 | 39 | 7 | 5086 | 5438 | 603777880 | 603777535 | 4.230000e-101 | 379.0 |
25 | TraesCS1A01G405800 | chr5A | 83.239 | 352 | 52 | 2 | 5086 | 5437 | 566557880 | 566558224 | 3.360000e-82 | 316.0 |
26 | TraesCS1A01G405800 | chr5A | 77.800 | 509 | 74 | 21 | 1028 | 1515 | 673553289 | 673553779 | 1.590000e-70 | 278.0 |
27 | TraesCS1A01G405800 | chr5A | 91.089 | 101 | 8 | 1 | 1405 | 1505 | 456476798 | 456476699 | 1.010000e-27 | 135.0 |
28 | TraesCS1A01G405800 | chr5A | 84.000 | 75 | 6 | 5 | 1044 | 1112 | 673511529 | 673511603 | 3.740000e-07 | 67.6 |
29 | TraesCS1A01G405800 | chr4B | 81.709 | 2165 | 302 | 52 | 1915 | 4046 | 632870711 | 632872814 | 0.000000e+00 | 1718.0 |
30 | TraesCS1A01G405800 | chr4B | 81.201 | 2165 | 298 | 50 | 1908 | 4045 | 633286680 | 633288762 | 0.000000e+00 | 1642.0 |
31 | TraesCS1A01G405800 | chr4B | 81.659 | 1543 | 203 | 44 | 2417 | 3930 | 633147175 | 633148666 | 0.000000e+00 | 1208.0 |
32 | TraesCS1A01G405800 | chr4B | 83.258 | 1320 | 167 | 34 | 2756 | 4045 | 633327465 | 633328760 | 0.000000e+00 | 1164.0 |
33 | TraesCS1A01G405800 | chr4B | 80.389 | 719 | 110 | 25 | 4078 | 4783 | 633149013 | 633149713 | 8.590000e-143 | 518.0 |
34 | TraesCS1A01G405800 | chr4B | 79.832 | 714 | 97 | 29 | 4080 | 4783 | 633288869 | 633289545 | 1.460000e-130 | 477.0 |
35 | TraesCS1A01G405800 | chr4B | 86.154 | 260 | 21 | 5 | 1056 | 1309 | 633142544 | 633142794 | 3.430000e-67 | 267.0 |
36 | TraesCS1A01G405800 | chr4B | 83.150 | 273 | 28 | 8 | 1040 | 1309 | 633282653 | 633282910 | 3.480000e-57 | 233.0 |
37 | TraesCS1A01G405800 | chr4B | 82.807 | 285 | 22 | 11 | 1034 | 1309 | 632863961 | 632864227 | 4.510000e-56 | 230.0 |
38 | TraesCS1A01G405800 | chr4B | 82.609 | 92 | 9 | 5 | 1028 | 1112 | 633136294 | 633136385 | 2.230000e-09 | 75.0 |
39 | TraesCS1A01G405800 | chr4D | 82.846 | 1778 | 233 | 45 | 2305 | 4046 | 493976688 | 493978429 | 0.000000e+00 | 1528.0 |
40 | TraesCS1A01G405800 | chr4D | 81.374 | 1863 | 242 | 53 | 2751 | 4574 | 494072645 | 494074441 | 0.000000e+00 | 1421.0 |
41 | TraesCS1A01G405800 | chr4D | 82.562 | 1663 | 215 | 41 | 2417 | 4046 | 494055154 | 494056774 | 0.000000e+00 | 1395.0 |
42 | TraesCS1A01G405800 | chr4D | 83.851 | 1158 | 131 | 36 | 2918 | 4045 | 494100405 | 494101536 | 0.000000e+00 | 1051.0 |
43 | TraesCS1A01G405800 | chr4D | 78.679 | 863 | 137 | 24 | 1916 | 2773 | 494071804 | 494072624 | 1.100000e-146 | 531.0 |
44 | TraesCS1A01G405800 | chr4D | 80.056 | 717 | 102 | 30 | 4089 | 4787 | 494056894 | 494057587 | 1.450000e-135 | 494.0 |
45 | TraesCS1A01G405800 | chr4D | 79.505 | 727 | 102 | 35 | 4078 | 4787 | 493978535 | 493979231 | 1.890000e-129 | 473.0 |
46 | TraesCS1A01G405800 | chr4D | 81.452 | 496 | 74 | 11 | 4091 | 4574 | 494101826 | 494102315 | 1.950000e-104 | 390.0 |
47 | TraesCS1A01G405800 | chr4D | 79.555 | 494 | 64 | 24 | 1034 | 1510 | 494050691 | 494051164 | 9.350000e-83 | 318.0 |
48 | TraesCS1A01G405800 | chr4D | 80.230 | 435 | 65 | 17 | 1083 | 1510 | 494065910 | 494066330 | 2.020000e-79 | 307.0 |
49 | TraesCS1A01G405800 | chr4D | 83.544 | 79 | 4 | 5 | 1043 | 1112 | 494039309 | 494039387 | 1.340000e-06 | 65.8 |
50 | TraesCS1A01G405800 | chr4D | 100.000 | 29 | 0 | 0 | 283 | 311 | 67354531 | 67354503 | 3.000000e-03 | 54.7 |
51 | TraesCS1A01G405800 | chr7D | 88.515 | 357 | 32 | 4 | 5086 | 5441 | 82443165 | 82442817 | 1.930000e-114 | 424.0 |
52 | TraesCS1A01G405800 | chr7D | 91.880 | 234 | 17 | 2 | 1 | 234 | 542082293 | 542082524 | 5.590000e-85 | 326.0 |
53 | TraesCS1A01G405800 | chr7D | 82.067 | 329 | 43 | 7 | 1955 | 2280 | 486201874 | 486201559 | 3.430000e-67 | 267.0 |
54 | TraesCS1A01G405800 | chr3B | 87.853 | 354 | 34 | 4 | 5086 | 5438 | 691713107 | 691713452 | 1.940000e-109 | 407.0 |
55 | TraesCS1A01G405800 | chr3B | 77.593 | 241 | 36 | 13 | 359 | 593 | 811503415 | 811503643 | 4.700000e-26 | 130.0 |
56 | TraesCS1A01G405800 | chr5B | 88.737 | 293 | 27 | 1 | 5146 | 5438 | 559112260 | 559111974 | 2.560000e-93 | 353.0 |
57 | TraesCS1A01G405800 | chr5B | 83.754 | 357 | 32 | 5 | 5086 | 5441 | 440219106 | 440218775 | 1.210000e-81 | 315.0 |
58 | TraesCS1A01G405800 | chr6A | 85.423 | 343 | 31 | 9 | 5086 | 5427 | 454847282 | 454846958 | 7.180000e-89 | 339.0 |
59 | TraesCS1A01G405800 | chr6A | 90.164 | 244 | 16 | 2 | 2032 | 2267 | 26325223 | 26324980 | 1.560000e-80 | 311.0 |
60 | TraesCS1A01G405800 | chr6A | 91.919 | 99 | 7 | 1 | 1407 | 1505 | 22037601 | 22037504 | 2.810000e-28 | 137.0 |
61 | TraesCS1A01G405800 | chr6A | 79.894 | 189 | 29 | 6 | 1835 | 2021 | 15638399 | 15638580 | 4.700000e-26 | 130.0 |
62 | TraesCS1A01G405800 | chr3A | 90.984 | 244 | 14 | 3 | 2032 | 2267 | 411267241 | 411266998 | 7.230000e-84 | 322.0 |
63 | TraesCS1A01G405800 | chr3A | 93.069 | 101 | 6 | 1 | 1405 | 1505 | 525198017 | 525198116 | 4.670000e-31 | 147.0 |
64 | TraesCS1A01G405800 | chr3A | 89.706 | 68 | 1 | 3 | 1965 | 2030 | 38127967 | 38127904 | 1.340000e-11 | 82.4 |
65 | TraesCS1A01G405800 | chr3A | 100.000 | 28 | 0 | 0 | 5567 | 5594 | 722508158 | 722508185 | 1.000000e-02 | 52.8 |
66 | TraesCS1A01G405800 | chr6B | 89.212 | 241 | 18 | 2 | 2032 | 2264 | 423096542 | 423096782 | 1.580000e-75 | 294.0 |
67 | TraesCS1A01G405800 | chr2B | 81.232 | 357 | 53 | 8 | 5089 | 5442 | 756671325 | 756670980 | 5.710000e-70 | 276.0 |
68 | TraesCS1A01G405800 | chr3D | 88.462 | 208 | 17 | 4 | 1867 | 2072 | 55147744 | 55147542 | 1.610000e-60 | 244.0 |
69 | TraesCS1A01G405800 | chr7B | 80.105 | 191 | 30 | 5 | 1835 | 2024 | 6065029 | 6064846 | 1.010000e-27 | 135.0 |
70 | TraesCS1A01G405800 | chr2A | 89.706 | 68 | 1 | 3 | 1965 | 2030 | 377015923 | 377015860 | 1.340000e-11 | 82.4 |
71 | TraesCS1A01G405800 | chr4A | 100.000 | 29 | 0 | 0 | 5569 | 5597 | 720889135 | 720889163 | 3.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1A01G405800 | chr1A | 568542689 | 568548469 | 5780 | False | 10676.000000 | 10676 | 100.000000 | 1 | 5781 | 1 | chr1A.!!$F3 | 5780 |
1 | TraesCS1A01G405800 | chr1B | 659554262 | 659559144 | 4882 | False | 1939.000000 | 4026 | 88.253667 | 298 | 5780 | 3 | chr1B.!!$F3 | 5482 |
2 | TraesCS1A01G405800 | chr1B | 79977919 | 79979005 | 1086 | False | 1162.000000 | 1162 | 86.210000 | 839 | 1939 | 1 | chr1B.!!$F1 | 1100 |
3 | TraesCS1A01G405800 | chr1D | 474052518 | 474056924 | 4406 | False | 1823.666667 | 2861 | 90.255333 | 646 | 5016 | 3 | chr1D.!!$F2 | 4370 |
4 | TraesCS1A01G405800 | chr1D | 474110316 | 474113095 | 2779 | False | 1252.666667 | 3013 | 91.555333 | 2703 | 5753 | 3 | chr1D.!!$F3 | 3050 |
5 | TraesCS1A01G405800 | chr5A | 673553289 | 673559637 | 6348 | False | 854.000000 | 1746 | 80.172333 | 1028 | 4787 | 3 | chr5A.!!$F5 | 3759 |
6 | TraesCS1A01G405800 | chr5A | 673691251 | 673693378 | 2127 | False | 776.000000 | 1077 | 81.596000 | 2843 | 4783 | 2 | chr5A.!!$F6 | 1940 |
7 | TraesCS1A01G405800 | chr5A | 49959479 | 49960021 | 542 | False | 588.000000 | 588 | 86.364000 | 1555 | 2098 | 1 | chr5A.!!$F2 | 543 |
8 | TraesCS1A01G405800 | chr4B | 632870711 | 632872814 | 2103 | False | 1718.000000 | 1718 | 81.709000 | 1915 | 4046 | 1 | chr4B.!!$F2 | 2131 |
9 | TraesCS1A01G405800 | chr4B | 633327465 | 633328760 | 1295 | False | 1164.000000 | 1164 | 83.258000 | 2756 | 4045 | 1 | chr4B.!!$F5 | 1289 |
10 | TraesCS1A01G405800 | chr4B | 633147175 | 633149713 | 2538 | False | 863.000000 | 1208 | 81.024000 | 2417 | 4783 | 2 | chr4B.!!$F6 | 2366 |
11 | TraesCS1A01G405800 | chr4B | 633282653 | 633289545 | 6892 | False | 784.000000 | 1642 | 81.394333 | 1040 | 4783 | 3 | chr4B.!!$F7 | 3743 |
12 | TraesCS1A01G405800 | chr4D | 493976688 | 493979231 | 2543 | False | 1000.500000 | 1528 | 81.175500 | 2305 | 4787 | 2 | chr4D.!!$F3 | 2482 |
13 | TraesCS1A01G405800 | chr4D | 494071804 | 494074441 | 2637 | False | 976.000000 | 1421 | 80.026500 | 1916 | 4574 | 2 | chr4D.!!$F5 | 2658 |
14 | TraesCS1A01G405800 | chr4D | 494050691 | 494057587 | 6896 | False | 735.666667 | 1395 | 80.724333 | 1034 | 4787 | 3 | chr4D.!!$F4 | 3753 |
15 | TraesCS1A01G405800 | chr4D | 494100405 | 494102315 | 1910 | False | 720.500000 | 1051 | 82.651500 | 2918 | 4574 | 2 | chr4D.!!$F6 | 1656 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
577 | 579 | 0.033366 | AACGTTTGATTTGCCAGGGC | 59.967 | 50.000 | 2.62 | 2.62 | 42.35 | 5.19 | F |
842 | 849 | 0.105964 | CGGACAGACAGACAACCCAA | 59.894 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 | F |
918 | 932 | 0.399233 | CCTCCGATCTTCTCCCCCTT | 60.399 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 | F |
1601 | 2089 | 0.659957 | GCGAGATGGATCAGTTTGCC | 59.340 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 | F |
2760 | 8808 | 1.329292 | TGCTTTCACCGTCAGTTTTCG | 59.671 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 | F |
3876 | 10082 | 0.109226 | GCCGGCGTATCCTACTCATC | 60.109 | 60.000 | 12.58 | 0.00 | 0.00 | 2.92 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2021 | 7962 | 0.928922 | CAGCGATCATCAGTGACTGC | 59.071 | 55.000 | 7.93 | 0.0 | 37.14 | 4.40 | R |
2737 | 8742 | 1.021968 | AACTGACGGTGAAAGCAACC | 58.978 | 50.000 | 0.00 | 0.0 | 0.00 | 3.77 | R |
2914 | 8974 | 1.613437 | ACACACTTAAGCCCACAATGC | 59.387 | 47.619 | 1.29 | 0.0 | 0.00 | 3.56 | R |
3339 | 9427 | 0.383231 | GCCCTCTGCATAATGTGTGC | 59.617 | 55.000 | 0.00 | 0.0 | 42.81 | 4.57 | R |
4394 | 11003 | 0.179119 | GAATGCTCCAGTGGCAATGC | 60.179 | 55.000 | 9.87 | 6.8 | 43.14 | 3.56 | R |
5758 | 12427 | 0.106469 | GGGCTCCAAGGAGGGAATTC | 60.106 | 60.000 | 17.34 | 0.0 | 42.19 | 2.17 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
19 | 20 | 2.467566 | GGAGAGGGCAAACGTAAGAA | 57.532 | 50.000 | 0.00 | 0.00 | 43.62 | 2.52 |
20 | 21 | 2.774687 | GGAGAGGGCAAACGTAAGAAA | 58.225 | 47.619 | 0.00 | 0.00 | 43.62 | 2.52 |
21 | 22 | 2.742589 | GGAGAGGGCAAACGTAAGAAAG | 59.257 | 50.000 | 0.00 | 0.00 | 43.62 | 2.62 |
22 | 23 | 3.400255 | GAGAGGGCAAACGTAAGAAAGT | 58.600 | 45.455 | 0.00 | 0.00 | 43.62 | 2.66 |
23 | 24 | 3.139077 | AGAGGGCAAACGTAAGAAAGTG | 58.861 | 45.455 | 0.00 | 0.00 | 43.62 | 3.16 |
24 | 25 | 3.135994 | GAGGGCAAACGTAAGAAAGTGA | 58.864 | 45.455 | 0.00 | 0.00 | 43.62 | 3.41 |
25 | 26 | 2.876550 | AGGGCAAACGTAAGAAAGTGAC | 59.123 | 45.455 | 0.00 | 0.00 | 43.62 | 3.67 |
26 | 27 | 2.614983 | GGGCAAACGTAAGAAAGTGACA | 59.385 | 45.455 | 0.00 | 0.00 | 43.62 | 3.58 |
27 | 28 | 3.252458 | GGGCAAACGTAAGAAAGTGACAT | 59.748 | 43.478 | 0.00 | 0.00 | 43.62 | 3.06 |
28 | 29 | 4.453136 | GGGCAAACGTAAGAAAGTGACATA | 59.547 | 41.667 | 0.00 | 0.00 | 43.62 | 2.29 |
29 | 30 | 5.049267 | GGGCAAACGTAAGAAAGTGACATAA | 60.049 | 40.000 | 0.00 | 0.00 | 43.62 | 1.90 |
30 | 31 | 6.077838 | GGCAAACGTAAGAAAGTGACATAAG | 58.922 | 40.000 | 0.00 | 0.00 | 43.62 | 1.73 |
31 | 32 | 5.564127 | GCAAACGTAAGAAAGTGACATAAGC | 59.436 | 40.000 | 0.00 | 0.00 | 43.62 | 3.09 |
32 | 33 | 5.857822 | AACGTAAGAAAGTGACATAAGCC | 57.142 | 39.130 | 0.00 | 0.00 | 43.62 | 4.35 |
33 | 34 | 3.924686 | ACGTAAGAAAGTGACATAAGCCG | 59.075 | 43.478 | 0.00 | 0.00 | 43.62 | 5.52 |
34 | 35 | 4.171005 | CGTAAGAAAGTGACATAAGCCGA | 58.829 | 43.478 | 0.00 | 0.00 | 43.02 | 5.54 |
35 | 36 | 4.624024 | CGTAAGAAAGTGACATAAGCCGAA | 59.376 | 41.667 | 0.00 | 0.00 | 43.02 | 4.30 |
36 | 37 | 5.119588 | CGTAAGAAAGTGACATAAGCCGAAA | 59.880 | 40.000 | 0.00 | 0.00 | 43.02 | 3.46 |
37 | 38 | 6.183360 | CGTAAGAAAGTGACATAAGCCGAAAT | 60.183 | 38.462 | 0.00 | 0.00 | 43.02 | 2.17 |
38 | 39 | 6.575162 | AAGAAAGTGACATAAGCCGAAATT | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
39 | 40 | 7.681939 | AAGAAAGTGACATAAGCCGAAATTA | 57.318 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
40 | 41 | 7.073342 | AGAAAGTGACATAAGCCGAAATTAC | 57.927 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
41 | 42 | 6.653320 | AGAAAGTGACATAAGCCGAAATTACA | 59.347 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
42 | 43 | 7.336931 | AGAAAGTGACATAAGCCGAAATTACAT | 59.663 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
43 | 44 | 8.500753 | AAAGTGACATAAGCCGAAATTACATA | 57.499 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
44 | 45 | 8.677148 | AAGTGACATAAGCCGAAATTACATAT | 57.323 | 30.769 | 0.00 | 0.00 | 0.00 | 1.78 |
45 | 46 | 9.772973 | AAGTGACATAAGCCGAAATTACATATA | 57.227 | 29.630 | 0.00 | 0.00 | 0.00 | 0.86 |
46 | 47 | 9.204570 | AGTGACATAAGCCGAAATTACATATAC | 57.795 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
47 | 48 | 9.204570 | GTGACATAAGCCGAAATTACATATACT | 57.795 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
48 | 49 | 9.772973 | TGACATAAGCCGAAATTACATATACTT | 57.227 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
80 | 81 | 9.784531 | AAGAGAGATTTGATAGAAGACAAACAA | 57.215 | 29.630 | 0.00 | 0.00 | 38.50 | 2.83 |
81 | 82 | 9.956640 | AGAGAGATTTGATAGAAGACAAACAAT | 57.043 | 29.630 | 0.00 | 0.00 | 38.50 | 2.71 |
99 | 100 | 3.605634 | CAATTCATTGTCTACCGGTGGA | 58.394 | 45.455 | 17.81 | 17.81 | 33.22 | 4.02 |
100 | 101 | 2.754946 | TTCATTGTCTACCGGTGGAC | 57.245 | 50.000 | 36.42 | 36.42 | 40.86 | 4.02 |
101 | 102 | 0.899720 | TCATTGTCTACCGGTGGACC | 59.100 | 55.000 | 38.40 | 24.83 | 39.91 | 4.46 |
102 | 103 | 0.902531 | CATTGTCTACCGGTGGACCT | 59.097 | 55.000 | 38.40 | 26.73 | 39.91 | 3.85 |
103 | 104 | 2.104967 | CATTGTCTACCGGTGGACCTA | 58.895 | 52.381 | 38.40 | 29.04 | 39.91 | 3.08 |
104 | 105 | 2.307496 | TTGTCTACCGGTGGACCTAA | 57.693 | 50.000 | 38.40 | 27.63 | 39.91 | 2.69 |
105 | 106 | 2.307496 | TGTCTACCGGTGGACCTAAA | 57.693 | 50.000 | 38.40 | 23.07 | 39.91 | 1.85 |
106 | 107 | 1.895131 | TGTCTACCGGTGGACCTAAAC | 59.105 | 52.381 | 38.40 | 20.47 | 39.91 | 2.01 |
107 | 108 | 1.895131 | GTCTACCGGTGGACCTAAACA | 59.105 | 52.381 | 34.18 | 3.65 | 35.38 | 2.83 |
108 | 109 | 2.498885 | GTCTACCGGTGGACCTAAACAT | 59.501 | 50.000 | 34.18 | 0.00 | 35.38 | 2.71 |
109 | 110 | 3.055602 | GTCTACCGGTGGACCTAAACATT | 60.056 | 47.826 | 34.18 | 0.00 | 35.38 | 2.71 |
110 | 111 | 2.484742 | ACCGGTGGACCTAAACATTC | 57.515 | 50.000 | 6.12 | 0.00 | 0.00 | 2.67 |
111 | 112 | 1.982958 | ACCGGTGGACCTAAACATTCT | 59.017 | 47.619 | 6.12 | 0.00 | 0.00 | 2.40 |
112 | 113 | 2.027469 | ACCGGTGGACCTAAACATTCTC | 60.027 | 50.000 | 6.12 | 0.00 | 0.00 | 2.87 |
113 | 114 | 2.027561 | CCGGTGGACCTAAACATTCTCA | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
114 | 115 | 3.558321 | CCGGTGGACCTAAACATTCTCAA | 60.558 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
115 | 116 | 4.069304 | CGGTGGACCTAAACATTCTCAAA | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
116 | 117 | 4.517453 | CGGTGGACCTAAACATTCTCAAAA | 59.483 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
117 | 118 | 5.562113 | CGGTGGACCTAAACATTCTCAAAAC | 60.562 | 44.000 | 0.00 | 0.00 | 0.00 | 2.43 |
118 | 119 | 5.449304 | GTGGACCTAAACATTCTCAAAACG | 58.551 | 41.667 | 0.00 | 0.00 | 0.00 | 3.60 |
119 | 120 | 5.008316 | GTGGACCTAAACATTCTCAAAACGT | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 3.99 |
120 | 121 | 5.008217 | TGGACCTAAACATTCTCAAAACGTG | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 4.49 |
121 | 122 | 5.237779 | GGACCTAAACATTCTCAAAACGTGA | 59.762 | 40.000 | 0.00 | 0.00 | 34.17 | 4.35 |
122 | 123 | 6.056428 | ACCTAAACATTCTCAAAACGTGAC | 57.944 | 37.500 | 0.00 | 0.00 | 31.13 | 3.67 |
123 | 124 | 5.587043 | ACCTAAACATTCTCAAAACGTGACA | 59.413 | 36.000 | 0.00 | 0.00 | 31.13 | 3.58 |
124 | 125 | 6.094325 | ACCTAAACATTCTCAAAACGTGACAA | 59.906 | 34.615 | 0.00 | 0.00 | 31.13 | 3.18 |
125 | 126 | 6.632834 | CCTAAACATTCTCAAAACGTGACAAG | 59.367 | 38.462 | 0.00 | 0.00 | 31.13 | 3.16 |
126 | 127 | 4.552166 | ACATTCTCAAAACGTGACAAGG | 57.448 | 40.909 | 0.00 | 0.00 | 31.13 | 3.61 |
127 | 128 | 3.243068 | ACATTCTCAAAACGTGACAAGGC | 60.243 | 43.478 | 0.00 | 0.00 | 31.13 | 4.35 |
128 | 129 | 2.325583 | TCTCAAAACGTGACAAGGCT | 57.674 | 45.000 | 0.00 | 0.00 | 31.13 | 4.58 |
129 | 130 | 2.639065 | TCTCAAAACGTGACAAGGCTT | 58.361 | 42.857 | 0.00 | 0.00 | 31.13 | 4.35 |
130 | 131 | 3.013921 | TCTCAAAACGTGACAAGGCTTT | 58.986 | 40.909 | 0.00 | 0.00 | 31.13 | 3.51 |
131 | 132 | 3.108144 | CTCAAAACGTGACAAGGCTTTG | 58.892 | 45.455 | 7.07 | 7.07 | 40.24 | 2.77 |
132 | 133 | 1.587946 | CAAAACGTGACAAGGCTTTGC | 59.412 | 47.619 | 8.71 | 2.40 | 37.85 | 3.68 |
133 | 134 | 1.102978 | AAACGTGACAAGGCTTTGCT | 58.897 | 45.000 | 8.71 | 0.00 | 37.85 | 3.91 |
134 | 135 | 1.961793 | AACGTGACAAGGCTTTGCTA | 58.038 | 45.000 | 8.71 | 0.00 | 37.85 | 3.49 |
135 | 136 | 1.226746 | ACGTGACAAGGCTTTGCTAC | 58.773 | 50.000 | 8.71 | 7.06 | 37.85 | 3.58 |
136 | 137 | 0.517316 | CGTGACAAGGCTTTGCTACC | 59.483 | 55.000 | 8.71 | 0.00 | 37.85 | 3.18 |
137 | 138 | 0.517316 | GTGACAAGGCTTTGCTACCG | 59.483 | 55.000 | 8.71 | 0.00 | 37.85 | 4.02 |
138 | 139 | 0.394938 | TGACAAGGCTTTGCTACCGA | 59.605 | 50.000 | 8.71 | 0.00 | 37.85 | 4.69 |
139 | 140 | 0.796927 | GACAAGGCTTTGCTACCGAC | 59.203 | 55.000 | 8.71 | 0.00 | 37.85 | 4.79 |
140 | 141 | 0.949105 | ACAAGGCTTTGCTACCGACG | 60.949 | 55.000 | 8.71 | 0.00 | 37.85 | 5.12 |
141 | 142 | 2.033194 | AAGGCTTTGCTACCGACGC | 61.033 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
142 | 143 | 3.497031 | GGCTTTGCTACCGACGCC | 61.497 | 66.667 | 0.00 | 0.00 | 33.18 | 5.68 |
143 | 144 | 2.740826 | GCTTTGCTACCGACGCCA | 60.741 | 61.111 | 0.00 | 0.00 | 0.00 | 5.69 |
144 | 145 | 2.106683 | GCTTTGCTACCGACGCCAT | 61.107 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
145 | 146 | 2.006772 | CTTTGCTACCGACGCCATC | 58.993 | 57.895 | 0.00 | 0.00 | 0.00 | 3.51 |
158 | 159 | 4.085876 | CCATCGATGGGGAATGCC | 57.914 | 61.111 | 32.99 | 0.00 | 44.31 | 4.40 |
159 | 160 | 1.968017 | CCATCGATGGGGAATGCCG | 60.968 | 63.158 | 32.99 | 7.29 | 44.31 | 5.69 |
160 | 161 | 1.071299 | CATCGATGGGGAATGCCGA | 59.929 | 57.895 | 17.96 | 0.00 | 33.83 | 5.54 |
161 | 162 | 0.534877 | CATCGATGGGGAATGCCGAA | 60.535 | 55.000 | 17.96 | 0.00 | 32.84 | 4.30 |
162 | 163 | 0.250467 | ATCGATGGGGAATGCCGAAG | 60.250 | 55.000 | 0.00 | 0.00 | 32.84 | 3.79 |
178 | 179 | 3.027974 | CGAAGGAAAAAGACCTCGACT | 57.972 | 47.619 | 0.00 | 0.00 | 36.67 | 4.18 |
179 | 180 | 2.987821 | CGAAGGAAAAAGACCTCGACTC | 59.012 | 50.000 | 0.00 | 0.00 | 36.67 | 3.36 |
180 | 181 | 3.327626 | GAAGGAAAAAGACCTCGACTCC | 58.672 | 50.000 | 0.00 | 0.00 | 36.67 | 3.85 |
181 | 182 | 1.624312 | AGGAAAAAGACCTCGACTCCC | 59.376 | 52.381 | 0.00 | 0.00 | 31.43 | 4.30 |
182 | 183 | 1.338864 | GGAAAAAGACCTCGACTCCCC | 60.339 | 57.143 | 0.00 | 0.00 | 0.00 | 4.81 |
183 | 184 | 0.691332 | AAAAAGACCTCGACTCCCCC | 59.309 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
184 | 185 | 0.473117 | AAAAGACCTCGACTCCCCCA | 60.473 | 55.000 | 0.00 | 0.00 | 0.00 | 4.96 |
185 | 186 | 0.473117 | AAAGACCTCGACTCCCCCAA | 60.473 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
186 | 187 | 0.473117 | AAGACCTCGACTCCCCCAAA | 60.473 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
187 | 188 | 0.473117 | AGACCTCGACTCCCCCAAAA | 60.473 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
188 | 189 | 0.618981 | GACCTCGACTCCCCCAAAAT | 59.381 | 55.000 | 0.00 | 0.00 | 0.00 | 1.82 |
189 | 190 | 1.004394 | GACCTCGACTCCCCCAAAATT | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
190 | 191 | 1.427753 | ACCTCGACTCCCCCAAAATTT | 59.572 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
191 | 192 | 1.818674 | CCTCGACTCCCCCAAAATTTG | 59.181 | 52.381 | 0.00 | 0.00 | 0.00 | 2.32 |
207 | 208 | 7.837202 | CAAAATTTGGATGCATATGAGTGTT | 57.163 | 32.000 | 6.97 | 0.00 | 0.00 | 3.32 |
208 | 209 | 8.259049 | CAAAATTTGGATGCATATGAGTGTTT | 57.741 | 30.769 | 6.97 | 0.00 | 0.00 | 2.83 |
209 | 210 | 8.723311 | CAAAATTTGGATGCATATGAGTGTTTT | 58.277 | 29.630 | 6.97 | 0.00 | 0.00 | 2.43 |
210 | 211 | 8.851541 | AAATTTGGATGCATATGAGTGTTTTT | 57.148 | 26.923 | 6.97 | 0.00 | 0.00 | 1.94 |
211 | 212 | 7.837202 | ATTTGGATGCATATGAGTGTTTTTG | 57.163 | 32.000 | 6.97 | 0.00 | 0.00 | 2.44 |
212 | 213 | 5.981088 | TGGATGCATATGAGTGTTTTTGT | 57.019 | 34.783 | 6.97 | 0.00 | 0.00 | 2.83 |
213 | 214 | 7.459795 | TTGGATGCATATGAGTGTTTTTGTA | 57.540 | 32.000 | 6.97 | 0.00 | 0.00 | 2.41 |
214 | 215 | 7.459795 | TGGATGCATATGAGTGTTTTTGTAA | 57.540 | 32.000 | 6.97 | 0.00 | 0.00 | 2.41 |
215 | 216 | 7.890515 | TGGATGCATATGAGTGTTTTTGTAAA | 58.109 | 30.769 | 6.97 | 0.00 | 0.00 | 2.01 |
216 | 217 | 8.530311 | TGGATGCATATGAGTGTTTTTGTAAAT | 58.470 | 29.630 | 6.97 | 0.00 | 0.00 | 1.40 |
217 | 218 | 8.810427 | GGATGCATATGAGTGTTTTTGTAAATG | 58.190 | 33.333 | 6.97 | 0.00 | 0.00 | 2.32 |
218 | 219 | 9.357652 | GATGCATATGAGTGTTTTTGTAAATGT | 57.642 | 29.630 | 6.97 | 0.00 | 0.00 | 2.71 |
219 | 220 | 9.709495 | ATGCATATGAGTGTTTTTGTAAATGTT | 57.291 | 25.926 | 6.97 | 0.00 | 0.00 | 2.71 |
220 | 221 | 9.539825 | TGCATATGAGTGTTTTTGTAAATGTTT | 57.460 | 25.926 | 6.97 | 0.00 | 0.00 | 2.83 |
259 | 260 | 8.574251 | AGTTAATATATGACCTTTTGCACACA | 57.426 | 30.769 | 0.00 | 0.00 | 0.00 | 3.72 |
260 | 261 | 9.019656 | AGTTAATATATGACCTTTTGCACACAA | 57.980 | 29.630 | 0.00 | 0.00 | 0.00 | 3.33 |
261 | 262 | 9.632807 | GTTAATATATGACCTTTTGCACACAAA | 57.367 | 29.630 | 0.00 | 0.00 | 43.97 | 2.83 |
297 | 298 | 8.974060 | AGGAAAGAAAACTACATCTGTAAACA | 57.026 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
298 | 299 | 9.403583 | AGGAAAGAAAACTACATCTGTAAACAA | 57.596 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
328 | 329 | 5.305644 | AGATGTTCCATATCTAGTGACCCAC | 59.694 | 44.000 | 0.00 | 0.00 | 33.30 | 4.61 |
335 | 336 | 0.594602 | TCTAGTGACCCACAACGTCG | 59.405 | 55.000 | 0.00 | 0.00 | 36.74 | 5.12 |
348 | 349 | 5.461078 | CCCACAACGTCGGAGTATTATTTAG | 59.539 | 44.000 | 0.00 | 0.00 | 0.00 | 1.85 |
350 | 351 | 5.517411 | CACAACGTCGGAGTATTATTTAGCA | 59.483 | 40.000 | 0.00 | 0.00 | 0.00 | 3.49 |
355 | 356 | 5.233476 | CGTCGGAGTATTATTTAGCAAGCAA | 59.767 | 40.000 | 0.00 | 0.00 | 0.00 | 3.91 |
358 | 359 | 8.770828 | GTCGGAGTATTATTTAGCAAGCAATTA | 58.229 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
376 | 377 | 3.868619 | TTAGGACCCCAATAAATCCCG | 57.131 | 47.619 | 0.00 | 0.00 | 30.99 | 5.14 |
384 | 385 | 3.181494 | CCCCAATAAATCCCGAACGTTTC | 60.181 | 47.826 | 0.46 | 0.00 | 0.00 | 2.78 |
405 | 406 | 4.600032 | TCGAATTTGATCATGGCAAATCG | 58.400 | 39.130 | 20.27 | 21.32 | 43.13 | 3.34 |
408 | 409 | 5.515982 | CGAATTTGATCATGGCAAATCGAAA | 59.484 | 36.000 | 20.27 | 12.73 | 43.13 | 3.46 |
414 | 415 | 5.863397 | TGATCATGGCAAATCGAAAGTTTTC | 59.137 | 36.000 | 0.00 | 0.00 | 31.07 | 2.29 |
416 | 417 | 6.567687 | TCATGGCAAATCGAAAGTTTTCTA | 57.432 | 33.333 | 0.00 | 0.00 | 35.07 | 2.10 |
419 | 420 | 6.567687 | TGGCAAATCGAAAGTTTTCTATGA | 57.432 | 33.333 | 0.00 | 0.00 | 35.07 | 2.15 |
420 | 421 | 6.378582 | TGGCAAATCGAAAGTTTTCTATGAC | 58.621 | 36.000 | 0.00 | 0.65 | 35.07 | 3.06 |
423 | 424 | 7.148967 | GGCAAATCGAAAGTTTTCTATGACAAC | 60.149 | 37.037 | 0.00 | 0.00 | 35.07 | 3.32 |
434 | 435 | 8.507249 | AGTTTTCTATGACAACTTTAGTGATGC | 58.493 | 33.333 | 0.00 | 0.00 | 29.67 | 3.91 |
445 | 447 | 6.208988 | ACTTTAGTGATGCGAGATGACTAA | 57.791 | 37.500 | 3.78 | 3.78 | 0.00 | 2.24 |
463 | 465 | 7.977789 | TGACTAATTTAGTTGACAAGCATGA | 57.022 | 32.000 | 10.32 | 0.00 | 39.59 | 3.07 |
467 | 469 | 8.629158 | ACTAATTTAGTTGACAAGCATGACAAA | 58.371 | 29.630 | 8.32 | 0.00 | 41.57 | 2.83 |
469 | 471 | 8.524870 | AATTTAGTTGACAAGCATGACAAATC | 57.475 | 30.769 | 10.02 | 0.00 | 41.57 | 2.17 |
470 | 472 | 4.510038 | AGTTGACAAGCATGACAAATCC | 57.490 | 40.909 | 8.32 | 0.00 | 41.57 | 3.01 |
471 | 473 | 3.890756 | AGTTGACAAGCATGACAAATCCA | 59.109 | 39.130 | 8.32 | 0.00 | 41.57 | 3.41 |
473 | 475 | 4.443913 | TGACAAGCATGACAAATCCATG | 57.556 | 40.909 | 0.00 | 0.00 | 43.06 | 3.66 |
481 | 483 | 5.006153 | CATGACAAATCCATGCTCAATGT | 57.994 | 39.130 | 0.00 | 0.00 | 35.55 | 2.71 |
482 | 484 | 4.443913 | TGACAAATCCATGCTCAATGTG | 57.556 | 40.909 | 0.00 | 0.00 | 34.11 | 3.21 |
487 | 489 | 6.056884 | ACAAATCCATGCTCAATGTGTTTTT | 58.943 | 32.000 | 0.00 | 0.00 | 34.11 | 1.94 |
523 | 525 | 4.624336 | TGCGTGTGTCAATTAAACTTGT | 57.376 | 36.364 | 0.00 | 0.00 | 0.00 | 3.16 |
531 | 533 | 7.591426 | GTGTGTCAATTAAACTTGTCATCCTTC | 59.409 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
532 | 534 | 6.797033 | GTGTCAATTAAACTTGTCATCCTTCG | 59.203 | 38.462 | 0.00 | 0.00 | 0.00 | 3.79 |
533 | 535 | 6.485313 | TGTCAATTAAACTTGTCATCCTTCGT | 59.515 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
534 | 536 | 7.015877 | GTCAATTAAACTTGTCATCCTTCGTC | 58.984 | 38.462 | 0.00 | 0.00 | 0.00 | 4.20 |
535 | 537 | 5.779806 | ATTAAACTTGTCATCCTTCGTCG | 57.220 | 39.130 | 0.00 | 0.00 | 0.00 | 5.12 |
537 | 539 | 2.638556 | ACTTGTCATCCTTCGTCGAG | 57.361 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
538 | 540 | 1.887198 | ACTTGTCATCCTTCGTCGAGT | 59.113 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
539 | 541 | 2.095161 | ACTTGTCATCCTTCGTCGAGTC | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
540 | 542 | 1.530323 | TGTCATCCTTCGTCGAGTCA | 58.470 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
541 | 543 | 1.883926 | TGTCATCCTTCGTCGAGTCAA | 59.116 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
542 | 544 | 2.251893 | GTCATCCTTCGTCGAGTCAAC | 58.748 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
543 | 545 | 1.883926 | TCATCCTTCGTCGAGTCAACA | 59.116 | 47.619 | 0.00 | 0.00 | 0.00 | 3.33 |
544 | 546 | 2.295070 | TCATCCTTCGTCGAGTCAACAA | 59.705 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
545 | 547 | 2.875087 | TCCTTCGTCGAGTCAACAAA | 57.125 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
546 | 548 | 3.167921 | TCCTTCGTCGAGTCAACAAAA | 57.832 | 42.857 | 0.00 | 0.00 | 0.00 | 2.44 |
547 | 549 | 3.724374 | TCCTTCGTCGAGTCAACAAAAT | 58.276 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
548 | 550 | 4.124238 | TCCTTCGTCGAGTCAACAAAATT | 58.876 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
549 | 551 | 5.291178 | TCCTTCGTCGAGTCAACAAAATTA | 58.709 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
550 | 552 | 5.929992 | TCCTTCGTCGAGTCAACAAAATTAT | 59.070 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
551 | 553 | 6.090358 | TCCTTCGTCGAGTCAACAAAATTATC | 59.910 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
552 | 554 | 5.430220 | TCGTCGAGTCAACAAAATTATCG | 57.570 | 39.130 | 0.00 | 0.00 | 0.00 | 2.92 |
553 | 555 | 4.919168 | TCGTCGAGTCAACAAAATTATCGT | 59.081 | 37.500 | 0.00 | 0.00 | 0.00 | 3.73 |
554 | 556 | 5.060077 | TCGTCGAGTCAACAAAATTATCGTC | 59.940 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
573 | 575 | 3.109619 | GTCGAAAACGTTTGATTTGCCA | 58.890 | 40.909 | 15.46 | 0.00 | 29.63 | 4.92 |
574 | 576 | 3.179599 | GTCGAAAACGTTTGATTTGCCAG | 59.820 | 43.478 | 15.46 | 0.00 | 29.63 | 4.85 |
575 | 577 | 2.470999 | CGAAAACGTTTGATTTGCCAGG | 59.529 | 45.455 | 15.46 | 0.00 | 0.00 | 4.45 |
576 | 578 | 2.524569 | AAACGTTTGATTTGCCAGGG | 57.475 | 45.000 | 13.81 | 0.00 | 0.00 | 4.45 |
577 | 579 | 0.033366 | AACGTTTGATTTGCCAGGGC | 59.967 | 50.000 | 2.62 | 2.62 | 42.35 | 5.19 |
578 | 580 | 1.079888 | CGTTTGATTTGCCAGGGCC | 60.080 | 57.895 | 8.02 | 0.00 | 41.09 | 5.80 |
579 | 581 | 1.814772 | CGTTTGATTTGCCAGGGCCA | 61.815 | 55.000 | 6.18 | 0.00 | 41.09 | 5.36 |
580 | 582 | 0.396060 | GTTTGATTTGCCAGGGCCAA | 59.604 | 50.000 | 6.18 | 3.25 | 41.09 | 4.52 |
581 | 583 | 1.135094 | TTTGATTTGCCAGGGCCAAA | 58.865 | 45.000 | 6.18 | 7.97 | 41.09 | 3.28 |
582 | 584 | 1.360185 | TTGATTTGCCAGGGCCAAAT | 58.640 | 45.000 | 6.18 | 12.87 | 41.09 | 2.32 |
583 | 585 | 0.903942 | TGATTTGCCAGGGCCAAATC | 59.096 | 50.000 | 25.03 | 25.03 | 42.21 | 2.17 |
584 | 586 | 0.178767 | GATTTGCCAGGGCCAAATCC | 59.821 | 55.000 | 23.21 | 13.53 | 39.61 | 3.01 |
585 | 587 | 0.252835 | ATTTGCCAGGGCCAAATCCT | 60.253 | 50.000 | 6.18 | 0.00 | 41.09 | 3.24 |
586 | 588 | 0.473501 | TTTGCCAGGGCCAAATCCTT | 60.474 | 50.000 | 6.18 | 0.00 | 41.09 | 3.36 |
587 | 589 | 0.411452 | TTGCCAGGGCCAAATCCTTA | 59.589 | 50.000 | 6.18 | 0.00 | 41.09 | 2.69 |
588 | 590 | 0.411452 | TGCCAGGGCCAAATCCTTAA | 59.589 | 50.000 | 6.18 | 0.00 | 41.09 | 1.85 |
589 | 591 | 0.824109 | GCCAGGGCCAAATCCTTAAC | 59.176 | 55.000 | 6.18 | 0.00 | 34.56 | 2.01 |
590 | 592 | 1.102978 | CCAGGGCCAAATCCTTAACG | 58.897 | 55.000 | 6.18 | 0.00 | 31.06 | 3.18 |
591 | 593 | 1.615919 | CCAGGGCCAAATCCTTAACGT | 60.616 | 52.381 | 6.18 | 0.00 | 31.06 | 3.99 |
592 | 594 | 2.167662 | CAGGGCCAAATCCTTAACGTT | 58.832 | 47.619 | 6.18 | 5.88 | 31.06 | 3.99 |
593 | 595 | 2.094752 | CAGGGCCAAATCCTTAACGTTG | 60.095 | 50.000 | 11.99 | 0.00 | 31.06 | 4.10 |
599 | 601 | 6.127675 | GGGCCAAATCCTTAACGTTGTTTATA | 60.128 | 38.462 | 11.99 | 0.00 | 0.00 | 0.98 |
630 | 632 | 7.249858 | TGAACAATTATGGACATTGATTGACG | 58.750 | 34.615 | 19.17 | 0.00 | 35.51 | 4.35 |
631 | 633 | 5.581605 | ACAATTATGGACATTGATTGACGC | 58.418 | 37.500 | 19.17 | 0.00 | 35.51 | 5.19 |
644 | 649 | 6.476243 | TTGATTGACGCTTACTACTTTTCC | 57.524 | 37.500 | 0.00 | 0.00 | 0.00 | 3.13 |
679 | 686 | 0.877071 | AGTAGTCGTCGCTCGGAAAA | 59.123 | 50.000 | 0.00 | 0.00 | 40.32 | 2.29 |
684 | 691 | 3.114065 | AGTCGTCGCTCGGAAAAATATC | 58.886 | 45.455 | 0.00 | 0.00 | 40.32 | 1.63 |
702 | 709 | 1.021920 | TCCAGACGAGACAGCGAGAG | 61.022 | 60.000 | 0.00 | 0.00 | 34.83 | 3.20 |
783 | 790 | 4.457496 | CGCCCGAGTGACTGCCAT | 62.457 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
799 | 806 | 1.985662 | CATGTGGGCCAGCATTGGT | 60.986 | 57.895 | 6.40 | 0.00 | 46.80 | 3.67 |
837 | 844 | 1.105167 | ACGGACGGACAGACAGACAA | 61.105 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
838 | 845 | 0.663568 | CGGACGGACAGACAGACAAC | 60.664 | 60.000 | 0.00 | 0.00 | 0.00 | 3.32 |
840 | 847 | 0.319641 | GACGGACAGACAGACAACCC | 60.320 | 60.000 | 0.00 | 0.00 | 0.00 | 4.11 |
842 | 849 | 0.105964 | CGGACAGACAGACAACCCAA | 59.894 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
843 | 850 | 1.873903 | CGGACAGACAGACAACCCAAG | 60.874 | 57.143 | 0.00 | 0.00 | 0.00 | 3.61 |
844 | 851 | 1.141053 | GGACAGACAGACAACCCAAGT | 59.859 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
845 | 852 | 2.484889 | GACAGACAGACAACCCAAGTC | 58.515 | 52.381 | 0.00 | 0.00 | 36.26 | 3.01 |
918 | 932 | 0.399233 | CCTCCGATCTTCTCCCCCTT | 60.399 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
925 | 942 | 3.198853 | CGATCTTCTCCCCCTTTTCTTCT | 59.801 | 47.826 | 0.00 | 0.00 | 0.00 | 2.85 |
926 | 943 | 4.682050 | CGATCTTCTCCCCCTTTTCTTCTC | 60.682 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
948 | 965 | 1.197492 | CATCTCTCTCTCGCTCATCCG | 59.803 | 57.143 | 0.00 | 0.00 | 0.00 | 4.18 |
980 | 997 | 1.098869 | GCCATCGACAGACAGAGAGA | 58.901 | 55.000 | 0.00 | 0.00 | 0.00 | 3.10 |
983 | 1000 | 2.016318 | CATCGACAGACAGAGAGAGCT | 58.984 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
989 | 1008 | 2.843730 | ACAGACAGAGAGAGCTAGGAGA | 59.156 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1179 | 1204 | 2.969238 | GCCATCATGCGGGAGTCG | 60.969 | 66.667 | 6.66 | 0.00 | 42.76 | 4.18 |
1347 | 1395 | 2.260639 | TTCATTGCCCCTCTCTCTCT | 57.739 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
1511 | 1575 | 2.352715 | CGCAAAGGGGTGAGATTTTTCC | 60.353 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
1524 | 1588 | 9.067986 | GGTGAGATTTTTCCTTCTTTCTTTCTA | 57.932 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
1601 | 2089 | 0.659957 | GCGAGATGGATCAGTTTGCC | 59.340 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
1642 | 2130 | 3.755112 | TCACAAGGGTCAACGTCAATA | 57.245 | 42.857 | 0.00 | 0.00 | 0.00 | 1.90 |
1645 | 2135 | 3.186409 | CACAAGGGTCAACGTCAATACTG | 59.814 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
1660 | 2216 | 5.418840 | GTCAATACTGGGTTGATTGATGGTT | 59.581 | 40.000 | 0.00 | 0.00 | 40.63 | 3.67 |
1661 | 2217 | 6.601613 | GTCAATACTGGGTTGATTGATGGTTA | 59.398 | 38.462 | 0.00 | 0.00 | 40.63 | 2.85 |
1669 | 2225 | 4.380867 | GGTTGATTGATGGTTACCTGCAAG | 60.381 | 45.833 | 2.07 | 0.00 | 0.00 | 4.01 |
1947 | 7886 | 3.945285 | TCTGAATTTTGGGCGTATCTTCC | 59.055 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
1993 | 7933 | 7.324178 | TGAACTAATGCTCTTCTCTTTACCTC | 58.676 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
1994 | 7934 | 7.179338 | TGAACTAATGCTCTTCTCTTTACCTCT | 59.821 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
1995 | 7935 | 8.596781 | AACTAATGCTCTTCTCTTTACCTCTA | 57.403 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
1996 | 7936 | 8.596781 | ACTAATGCTCTTCTCTTTACCTCTAA | 57.403 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
2021 | 7962 | 5.917541 | AACAAGCTTGCTCATTGATTTTG | 57.082 | 34.783 | 26.27 | 0.00 | 0.00 | 2.44 |
2116 | 8062 | 8.082242 | ACAGTAGTTCATTTTTCAATGGCTTAC | 58.918 | 33.333 | 0.00 | 0.00 | 40.41 | 2.34 |
2269 | 8229 | 5.982890 | ACACTTTGTGCCTGCTTATTATT | 57.017 | 34.783 | 0.00 | 0.00 | 36.98 | 1.40 |
2270 | 8230 | 7.040062 | ACAACACTTTGTGCCTGCTTATTATTA | 60.040 | 33.333 | 0.00 | 0.00 | 44.66 | 0.98 |
2549 | 8523 | 4.130118 | CCAGGTATGCTTATCCTCACAAC | 58.870 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
2621 | 8626 | 7.392953 | TGGACTCATTATACAATTGTTTGCTCA | 59.607 | 33.333 | 17.78 | 0.00 | 36.22 | 4.26 |
2707 | 8712 | 2.616960 | TGCTTGCAGTGATAGGTAACG | 58.383 | 47.619 | 0.00 | 0.00 | 46.39 | 3.18 |
2716 | 8721 | 5.515626 | GCAGTGATAGGTAACGTGACTTAAG | 59.484 | 44.000 | 2.34 | 0.00 | 46.39 | 1.85 |
2737 | 8742 | 2.092211 | GGTCGACGCATTACTGAACTTG | 59.908 | 50.000 | 9.92 | 0.00 | 0.00 | 3.16 |
2742 | 8747 | 2.031157 | ACGCATTACTGAACTTGGTTGC | 60.031 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
2760 | 8808 | 1.329292 | TGCTTTCACCGTCAGTTTTCG | 59.671 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
2767 | 8815 | 2.565367 | CCGTCAGTTTTCGGTTAACG | 57.435 | 50.000 | 0.00 | 0.00 | 46.11 | 3.18 |
2773 | 8821 | 4.046462 | TCAGTTTTCGGTTAACGTCTGAG | 58.954 | 43.478 | 0.00 | 0.00 | 44.69 | 3.35 |
2774 | 8822 | 3.183775 | CAGTTTTCGGTTAACGTCTGAGG | 59.816 | 47.826 | 0.00 | 0.00 | 44.69 | 3.86 |
2829 | 8879 | 6.309712 | CCATGTTGGCAAATATGACTAGAG | 57.690 | 41.667 | 20.88 | 5.59 | 37.13 | 2.43 |
2845 | 8895 | 6.905736 | TGACTAGAGTCTTGAGATGTCCTAT | 58.094 | 40.000 | 8.66 | 0.00 | 44.99 | 2.57 |
2851 | 8902 | 5.999044 | AGTCTTGAGATGTCCTATGCAAAT | 58.001 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
2866 | 8917 | 8.355169 | TCCTATGCAAATATTTCATTTCAGCTC | 58.645 | 33.333 | 14.30 | 0.00 | 0.00 | 4.09 |
2895 | 8953 | 5.756833 | AGGAAAAGTTACCGTGTCAGTAAAG | 59.243 | 40.000 | 0.00 | 0.00 | 31.78 | 1.85 |
2912 | 8972 | 5.361857 | CAGTAAAGAATGCTGATTTCCCCAT | 59.638 | 40.000 | 0.00 | 0.00 | 43.78 | 4.00 |
2914 | 8974 | 4.748277 | AAGAATGCTGATTTCCCCATTG | 57.252 | 40.909 | 0.00 | 0.00 | 0.00 | 2.82 |
2919 | 8979 | 2.093394 | TGCTGATTTCCCCATTGCATTG | 60.093 | 45.455 | 1.49 | 1.49 | 0.00 | 2.82 |
2932 | 8992 | 1.993956 | TGCATTGTGGGCTTAAGTGT | 58.006 | 45.000 | 4.02 | 0.00 | 0.00 | 3.55 |
3045 | 9106 | 5.489792 | TGATACCAGGCCTATTCTTCATC | 57.510 | 43.478 | 3.98 | 2.40 | 0.00 | 2.92 |
3091 | 9156 | 6.409761 | GGTTTGTATACGCAAATGTTGATACG | 59.590 | 38.462 | 0.00 | 0.00 | 40.01 | 3.06 |
3114 | 9179 | 4.634184 | AGTGCTGCATCATTCTGAATTC | 57.366 | 40.909 | 5.27 | 0.00 | 0.00 | 2.17 |
3233 | 9299 | 4.573900 | ACATCACCTCAGAAGTGAATGAC | 58.426 | 43.478 | 5.94 | 0.00 | 46.67 | 3.06 |
3271 | 9339 | 3.136443 | TGCCTTTCTTCTTCTGGACTGAA | 59.864 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
3284 | 9359 | 7.550551 | TCTTCTGGACTGAATAACTGCAAATAG | 59.449 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
3285 | 9360 | 6.946340 | TCTGGACTGAATAACTGCAAATAGA | 58.054 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
3286 | 9361 | 7.568349 | TCTGGACTGAATAACTGCAAATAGAT | 58.432 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
3287 | 9362 | 8.704668 | TCTGGACTGAATAACTGCAAATAGATA | 58.295 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
3288 | 9363 | 8.662781 | TGGACTGAATAACTGCAAATAGATAC | 57.337 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
3289 | 9364 | 8.486210 | TGGACTGAATAACTGCAAATAGATACT | 58.514 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
3290 | 9365 | 8.768955 | GGACTGAATAACTGCAAATAGATACTG | 58.231 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
3291 | 9366 | 9.319143 | GACTGAATAACTGCAAATAGATACTGT | 57.681 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
3324 | 9399 | 6.999950 | TGTACTTTCAGCTTAGTCACCAATA | 58.000 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
3339 | 9427 | 8.761575 | AGTCACCAATATTTGCTTTAACATTG | 57.238 | 30.769 | 0.00 | 0.00 | 0.00 | 2.82 |
3340 | 9428 | 7.331687 | AGTCACCAATATTTGCTTTAACATTGC | 59.668 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
3341 | 9429 | 7.117523 | GTCACCAATATTTGCTTTAACATTGCA | 59.882 | 33.333 | 0.00 | 0.00 | 34.69 | 4.08 |
3342 | 9430 | 7.117523 | TCACCAATATTTGCTTTAACATTGCAC | 59.882 | 33.333 | 0.00 | 0.00 | 36.37 | 4.57 |
3343 | 9431 | 6.933521 | ACCAATATTTGCTTTAACATTGCACA | 59.066 | 30.769 | 0.00 | 0.00 | 36.37 | 4.57 |
3344 | 9432 | 7.095271 | ACCAATATTTGCTTTAACATTGCACAC | 60.095 | 33.333 | 0.00 | 0.00 | 36.37 | 3.82 |
3345 | 9433 | 7.095313 | CCAATATTTGCTTTAACATTGCACACA | 60.095 | 33.333 | 0.00 | 0.00 | 36.37 | 3.72 |
3347 | 9435 | 6.864360 | ATTTGCTTTAACATTGCACACATT | 57.136 | 29.167 | 0.00 | 0.00 | 36.37 | 2.71 |
3359 | 9447 | 1.027357 | CACACATTATGCAGAGGGCC | 58.973 | 55.000 | 0.00 | 0.00 | 43.89 | 5.80 |
3581 | 9675 | 5.398711 | CGGAATCAACGCTATACTGTTCTAC | 59.601 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3620 | 9714 | 1.866880 | GCTGCAGGCAAGTTGAACAAG | 60.867 | 52.381 | 17.12 | 0.00 | 41.35 | 3.16 |
3753 | 9868 | 2.928116 | GGTATTCAGGTGTGTAACTCGC | 59.072 | 50.000 | 0.00 | 0.00 | 38.04 | 5.03 |
3758 | 9873 | 1.066858 | CAGGTGTGTAACTCGCCAGAT | 60.067 | 52.381 | 6.74 | 0.00 | 38.04 | 2.90 |
3876 | 10082 | 0.109226 | GCCGGCGTATCCTACTCATC | 60.109 | 60.000 | 12.58 | 0.00 | 0.00 | 2.92 |
3883 | 10089 | 4.378253 | GGCGTATCCTACTCATCGTAACTC | 60.378 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4063 | 10561 | 5.943416 | CAGGGTAACACAATAAATCACAGGA | 59.057 | 40.000 | 0.00 | 0.00 | 39.74 | 3.86 |
4067 | 10565 | 5.964958 | AACACAATAAATCACAGGACCTG | 57.035 | 39.130 | 20.45 | 20.45 | 37.52 | 4.00 |
4145 | 10734 | 5.471456 | GGACACTGTTTCACAAGATTCTCAT | 59.529 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
4195 | 10784 | 3.142951 | TGCTTGCTATTGTGGTACGTTT | 58.857 | 40.909 | 0.00 | 0.00 | 0.00 | 3.60 |
4347 | 10943 | 5.030147 | TGGGTCATAATGTCTGAGGTACTT | 58.970 | 41.667 | 0.00 | 0.00 | 41.55 | 2.24 |
4348 | 10944 | 6.199376 | TGGGTCATAATGTCTGAGGTACTTA | 58.801 | 40.000 | 0.00 | 0.00 | 41.55 | 2.24 |
4400 | 11009 | 6.869421 | AACTATTTTGTTATGTCGCATTGC | 57.131 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
4454 | 11065 | 7.458397 | TGGACTTGTTATGTTTACAGATCCTT | 58.542 | 34.615 | 0.00 | 0.00 | 34.71 | 3.36 |
4478 | 11089 | 2.845363 | TGAGCATCAAGAGTCTTGCA | 57.155 | 45.000 | 25.31 | 15.25 | 45.97 | 4.08 |
4502 | 11113 | 3.027170 | CTTCGCGACGCTTGCCAAT | 62.027 | 57.895 | 19.02 | 0.00 | 0.00 | 3.16 |
4690 | 11315 | 5.428783 | AGGTACCTTTGTGTCCTATATGCTT | 59.571 | 40.000 | 9.21 | 0.00 | 31.47 | 3.91 |
4705 | 11330 | 2.244000 | GCTTGTGAGCGCCTTTACA | 58.756 | 52.632 | 2.29 | 1.04 | 39.48 | 2.41 |
4842 | 11467 | 3.386078 | TCTGCAAGTTGGGCATTGTTTTA | 59.614 | 39.130 | 4.75 | 0.00 | 41.06 | 1.52 |
5129 | 11769 | 3.181450 | CCCATATCCAGTTCCTTGAGTCC | 60.181 | 52.174 | 0.00 | 0.00 | 0.00 | 3.85 |
5133 | 11773 | 0.679505 | CCAGTTCCTTGAGTCCGACA | 59.320 | 55.000 | 0.40 | 0.00 | 0.00 | 4.35 |
5223 | 11863 | 1.568504 | AGATTCCGAGTGTTAGGGCA | 58.431 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
5264 | 11904 | 5.950549 | TGTTTTTGTTGGTCTGGGTAGTTTA | 59.049 | 36.000 | 0.00 | 0.00 | 0.00 | 2.01 |
5265 | 11905 | 6.095720 | TGTTTTTGTTGGTCTGGGTAGTTTAG | 59.904 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
5266 | 11906 | 4.360951 | TTGTTGGTCTGGGTAGTTTAGG | 57.639 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
5267 | 11907 | 3.320129 | TGTTGGTCTGGGTAGTTTAGGT | 58.680 | 45.455 | 0.00 | 0.00 | 0.00 | 3.08 |
5268 | 11908 | 3.717913 | TGTTGGTCTGGGTAGTTTAGGTT | 59.282 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
5269 | 11909 | 4.166531 | TGTTGGTCTGGGTAGTTTAGGTTT | 59.833 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
5276 | 11916 | 2.934553 | GGGTAGTTTAGGTTTAGCGCTG | 59.065 | 50.000 | 22.90 | 0.00 | 0.00 | 5.18 |
5290 | 11930 | 0.245539 | GCGCTGTGTTGTACCTCCTA | 59.754 | 55.000 | 0.00 | 0.00 | 0.00 | 2.94 |
5305 | 11945 | 3.718956 | ACCTCCTATTTAGGCTGAGCATT | 59.281 | 43.478 | 6.82 | 0.00 | 43.31 | 3.56 |
5306 | 11946 | 4.166919 | ACCTCCTATTTAGGCTGAGCATTT | 59.833 | 41.667 | 6.82 | 0.00 | 43.31 | 2.32 |
5316 | 11956 | 2.613133 | GGCTGAGCATTTCATGTCTCTC | 59.387 | 50.000 | 6.82 | 0.00 | 35.71 | 3.20 |
5319 | 11959 | 4.505808 | CTGAGCATTTCATGTCTCTCTGT | 58.494 | 43.478 | 0.00 | 0.00 | 35.71 | 3.41 |
5344 | 11984 | 0.818938 | GCACCATGTTCATGCCATCA | 59.181 | 50.000 | 7.21 | 0.00 | 33.06 | 3.07 |
5345 | 11985 | 1.470285 | GCACCATGTTCATGCCATCAC | 60.470 | 52.381 | 7.21 | 0.00 | 33.06 | 3.06 |
5346 | 11986 | 2.097036 | CACCATGTTCATGCCATCACT | 58.903 | 47.619 | 7.21 | 0.00 | 0.00 | 3.41 |
5347 | 11987 | 2.097036 | ACCATGTTCATGCCATCACTG | 58.903 | 47.619 | 7.21 | 0.00 | 0.00 | 3.66 |
5348 | 11988 | 1.407618 | CCATGTTCATGCCATCACTGG | 59.592 | 52.381 | 7.21 | 0.00 | 46.17 | 4.00 |
5349 | 11989 | 2.097036 | CATGTTCATGCCATCACTGGT | 58.903 | 47.619 | 0.00 | 0.00 | 45.10 | 4.00 |
5350 | 11990 | 2.291209 | TGTTCATGCCATCACTGGTT | 57.709 | 45.000 | 0.00 | 0.00 | 45.10 | 3.67 |
5364 | 12004 | 1.603171 | TGGTTGTGCCATGCGATGT | 60.603 | 52.632 | 0.00 | 0.00 | 43.61 | 3.06 |
5373 | 12013 | 0.250038 | CCATGCGATGTACCCCTCTG | 60.250 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
5411 | 12051 | 9.605275 | CAACTCCTTCTATCAATGAAAGATACA | 57.395 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
5421 | 12061 | 6.151691 | TCAATGAAAGATACACAAGCTTTGC | 58.848 | 36.000 | 0.00 | 0.00 | 32.45 | 3.68 |
5428 | 12068 | 4.935205 | AGATACACAAGCTTTGCGTATTCA | 59.065 | 37.500 | 0.00 | 0.00 | 38.58 | 2.57 |
5430 | 12070 | 2.031157 | ACACAAGCTTTGCGTATTCACC | 60.031 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
5434 | 12074 | 4.047822 | CAAGCTTTGCGTATTCACCAAAA | 58.952 | 39.130 | 0.00 | 0.00 | 29.93 | 2.44 |
5464 | 12104 | 4.511826 | GGGTAAACAGAACAGAAGACACAG | 59.488 | 45.833 | 0.00 | 0.00 | 0.00 | 3.66 |
5515 | 12184 | 3.584733 | AGGCCTTCTGACTTGACTTTT | 57.415 | 42.857 | 0.00 | 0.00 | 0.00 | 2.27 |
5517 | 12186 | 5.248380 | AGGCCTTCTGACTTGACTTTTAT | 57.752 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
5555 | 12224 | 4.339247 | ACAATGAACTTCAGGTTGTCCTTG | 59.661 | 41.667 | 5.32 | 1.92 | 43.07 | 3.61 |
5669 | 12338 | 3.822167 | GGTTTAGGTCGGATTTTTGTCCA | 59.178 | 43.478 | 0.00 | 0.00 | 38.21 | 4.02 |
5682 | 12351 | 0.758734 | TTGTCCAGTGGGAGTGTGAG | 59.241 | 55.000 | 9.92 | 0.00 | 46.12 | 3.51 |
5754 | 12423 | 2.226330 | TGATTTCGTTTGGGTGGTCAG | 58.774 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
5758 | 12427 | 2.983592 | GTTTGGGTGGTCAGGCCG | 60.984 | 66.667 | 0.00 | 0.00 | 41.21 | 6.13 |
5773 | 12442 | 1.607612 | GCCGAATTCCCTCCTTGGA | 59.392 | 57.895 | 0.00 | 0.00 | 38.35 | 3.53 |
5775 | 12444 | 0.464554 | CCGAATTCCCTCCTTGGAGC | 60.465 | 60.000 | 11.01 | 0.00 | 38.35 | 4.70 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
7 | 8 | 5.564127 | GCTTATGTCACTTTCTTACGTTTGC | 59.436 | 40.000 | 0.00 | 0.00 | 0.00 | 3.68 |
8 | 9 | 6.077838 | GGCTTATGTCACTTTCTTACGTTTG | 58.922 | 40.000 | 0.00 | 0.00 | 0.00 | 2.93 |
9 | 10 | 5.107220 | CGGCTTATGTCACTTTCTTACGTTT | 60.107 | 40.000 | 0.00 | 0.00 | 0.00 | 3.60 |
10 | 11 | 4.387862 | CGGCTTATGTCACTTTCTTACGTT | 59.612 | 41.667 | 0.00 | 0.00 | 0.00 | 3.99 |
11 | 12 | 3.924686 | CGGCTTATGTCACTTTCTTACGT | 59.075 | 43.478 | 0.00 | 0.00 | 0.00 | 3.57 |
12 | 13 | 4.171005 | TCGGCTTATGTCACTTTCTTACG | 58.829 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
13 | 14 | 6.476243 | TTTCGGCTTATGTCACTTTCTTAC | 57.524 | 37.500 | 0.00 | 0.00 | 0.00 | 2.34 |
14 | 15 | 7.681939 | AATTTCGGCTTATGTCACTTTCTTA | 57.318 | 32.000 | 0.00 | 0.00 | 0.00 | 2.10 |
15 | 16 | 6.575162 | AATTTCGGCTTATGTCACTTTCTT | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
16 | 17 | 6.653320 | TGTAATTTCGGCTTATGTCACTTTCT | 59.347 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
17 | 18 | 6.837992 | TGTAATTTCGGCTTATGTCACTTTC | 58.162 | 36.000 | 0.00 | 0.00 | 0.00 | 2.62 |
18 | 19 | 6.811253 | TGTAATTTCGGCTTATGTCACTTT | 57.189 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
19 | 20 | 8.677148 | ATATGTAATTTCGGCTTATGTCACTT | 57.323 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
20 | 21 | 9.204570 | GTATATGTAATTTCGGCTTATGTCACT | 57.795 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
21 | 22 | 9.204570 | AGTATATGTAATTTCGGCTTATGTCAC | 57.795 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
22 | 23 | 9.772973 | AAGTATATGTAATTTCGGCTTATGTCA | 57.227 | 29.630 | 0.00 | 0.00 | 0.00 | 3.58 |
54 | 55 | 9.784531 | TTGTTTGTCTTCTATCAAATCTCTCTT | 57.215 | 29.630 | 0.00 | 0.00 | 36.25 | 2.85 |
55 | 56 | 9.956640 | ATTGTTTGTCTTCTATCAAATCTCTCT | 57.043 | 29.630 | 0.00 | 0.00 | 36.25 | 3.10 |
78 | 79 | 3.374058 | GTCCACCGGTAGACAATGAATTG | 59.626 | 47.826 | 25.68 | 0.53 | 43.26 | 2.32 |
79 | 80 | 3.606687 | GTCCACCGGTAGACAATGAATT | 58.393 | 45.455 | 25.68 | 0.00 | 33.08 | 2.17 |
80 | 81 | 2.093128 | GGTCCACCGGTAGACAATGAAT | 60.093 | 50.000 | 30.11 | 0.00 | 34.58 | 2.57 |
81 | 82 | 1.276989 | GGTCCACCGGTAGACAATGAA | 59.723 | 52.381 | 30.11 | 0.00 | 34.58 | 2.57 |
82 | 83 | 0.899720 | GGTCCACCGGTAGACAATGA | 59.100 | 55.000 | 30.11 | 6.81 | 34.58 | 2.57 |
83 | 84 | 0.902531 | AGGTCCACCGGTAGACAATG | 59.097 | 55.000 | 30.11 | 7.23 | 42.08 | 2.82 |
84 | 85 | 2.537633 | TAGGTCCACCGGTAGACAAT | 57.462 | 50.000 | 30.11 | 21.25 | 42.08 | 2.71 |
85 | 86 | 2.299867 | GTTTAGGTCCACCGGTAGACAA | 59.700 | 50.000 | 30.11 | 16.70 | 42.08 | 3.18 |
86 | 87 | 1.895131 | GTTTAGGTCCACCGGTAGACA | 59.105 | 52.381 | 30.11 | 11.79 | 42.08 | 3.41 |
87 | 88 | 1.895131 | TGTTTAGGTCCACCGGTAGAC | 59.105 | 52.381 | 23.14 | 23.14 | 42.08 | 2.59 |
88 | 89 | 2.307496 | TGTTTAGGTCCACCGGTAGA | 57.693 | 50.000 | 6.87 | 1.03 | 42.08 | 2.59 |
89 | 90 | 3.197116 | AGAATGTTTAGGTCCACCGGTAG | 59.803 | 47.826 | 6.87 | 0.00 | 42.08 | 3.18 |
90 | 91 | 3.175594 | AGAATGTTTAGGTCCACCGGTA | 58.824 | 45.455 | 6.87 | 0.00 | 42.08 | 4.02 |
91 | 92 | 1.982958 | AGAATGTTTAGGTCCACCGGT | 59.017 | 47.619 | 0.00 | 0.00 | 42.08 | 5.28 |
92 | 93 | 2.027561 | TGAGAATGTTTAGGTCCACCGG | 60.028 | 50.000 | 0.00 | 0.00 | 42.08 | 5.28 |
93 | 94 | 3.328382 | TGAGAATGTTTAGGTCCACCG | 57.672 | 47.619 | 0.00 | 0.00 | 42.08 | 4.94 |
94 | 95 | 5.562113 | CGTTTTGAGAATGTTTAGGTCCACC | 60.562 | 44.000 | 0.00 | 0.00 | 0.00 | 4.61 |
95 | 96 | 5.008316 | ACGTTTTGAGAATGTTTAGGTCCAC | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
96 | 97 | 5.008217 | CACGTTTTGAGAATGTTTAGGTCCA | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
97 | 98 | 5.237779 | TCACGTTTTGAGAATGTTTAGGTCC | 59.762 | 40.000 | 0.00 | 0.00 | 0.00 | 4.46 |
98 | 99 | 6.134061 | GTCACGTTTTGAGAATGTTTAGGTC | 58.866 | 40.000 | 0.00 | 0.00 | 33.71 | 3.85 |
99 | 100 | 5.587043 | TGTCACGTTTTGAGAATGTTTAGGT | 59.413 | 36.000 | 0.00 | 0.00 | 33.71 | 3.08 |
100 | 101 | 6.055231 | TGTCACGTTTTGAGAATGTTTAGG | 57.945 | 37.500 | 0.00 | 0.00 | 33.71 | 2.69 |
101 | 102 | 6.632834 | CCTTGTCACGTTTTGAGAATGTTTAG | 59.367 | 38.462 | 0.00 | 0.00 | 36.91 | 1.85 |
102 | 103 | 6.491394 | CCTTGTCACGTTTTGAGAATGTTTA | 58.509 | 36.000 | 0.00 | 0.00 | 36.91 | 2.01 |
103 | 104 | 5.339990 | CCTTGTCACGTTTTGAGAATGTTT | 58.660 | 37.500 | 0.00 | 0.00 | 36.91 | 2.83 |
104 | 105 | 4.733523 | GCCTTGTCACGTTTTGAGAATGTT | 60.734 | 41.667 | 0.00 | 0.00 | 36.91 | 2.71 |
105 | 106 | 3.243068 | GCCTTGTCACGTTTTGAGAATGT | 60.243 | 43.478 | 0.00 | 0.00 | 36.91 | 2.71 |
106 | 107 | 3.003689 | AGCCTTGTCACGTTTTGAGAATG | 59.996 | 43.478 | 0.00 | 0.00 | 36.91 | 2.67 |
107 | 108 | 3.214328 | AGCCTTGTCACGTTTTGAGAAT | 58.786 | 40.909 | 0.00 | 0.00 | 36.91 | 2.40 |
108 | 109 | 2.639065 | AGCCTTGTCACGTTTTGAGAA | 58.361 | 42.857 | 0.00 | 0.00 | 35.17 | 2.87 |
109 | 110 | 2.325583 | AGCCTTGTCACGTTTTGAGA | 57.674 | 45.000 | 0.00 | 0.00 | 33.71 | 3.27 |
110 | 111 | 3.108144 | CAAAGCCTTGTCACGTTTTGAG | 58.892 | 45.455 | 0.00 | 0.00 | 33.71 | 3.02 |
111 | 112 | 2.733858 | GCAAAGCCTTGTCACGTTTTGA | 60.734 | 45.455 | 8.78 | 0.00 | 34.79 | 2.69 |
112 | 113 | 1.587946 | GCAAAGCCTTGTCACGTTTTG | 59.412 | 47.619 | 0.00 | 0.00 | 34.79 | 2.44 |
113 | 114 | 1.476488 | AGCAAAGCCTTGTCACGTTTT | 59.524 | 42.857 | 0.00 | 0.00 | 34.79 | 2.43 |
114 | 115 | 1.102978 | AGCAAAGCCTTGTCACGTTT | 58.897 | 45.000 | 0.00 | 0.00 | 34.79 | 3.60 |
115 | 116 | 1.602377 | GTAGCAAAGCCTTGTCACGTT | 59.398 | 47.619 | 0.00 | 0.00 | 34.79 | 3.99 |
116 | 117 | 1.226746 | GTAGCAAAGCCTTGTCACGT | 58.773 | 50.000 | 0.00 | 0.00 | 34.79 | 4.49 |
117 | 118 | 0.517316 | GGTAGCAAAGCCTTGTCACG | 59.483 | 55.000 | 0.00 | 0.00 | 34.79 | 4.35 |
118 | 119 | 0.517316 | CGGTAGCAAAGCCTTGTCAC | 59.483 | 55.000 | 0.00 | 0.00 | 34.79 | 3.67 |
119 | 120 | 0.394938 | TCGGTAGCAAAGCCTTGTCA | 59.605 | 50.000 | 0.00 | 0.00 | 34.79 | 3.58 |
120 | 121 | 0.796927 | GTCGGTAGCAAAGCCTTGTC | 59.203 | 55.000 | 0.00 | 0.00 | 34.79 | 3.18 |
121 | 122 | 0.949105 | CGTCGGTAGCAAAGCCTTGT | 60.949 | 55.000 | 0.00 | 0.00 | 34.79 | 3.16 |
122 | 123 | 1.787847 | CGTCGGTAGCAAAGCCTTG | 59.212 | 57.895 | 0.00 | 0.00 | 35.49 | 3.61 |
123 | 124 | 2.033194 | GCGTCGGTAGCAAAGCCTT | 61.033 | 57.895 | 0.00 | 0.00 | 34.19 | 4.35 |
124 | 125 | 2.434359 | GCGTCGGTAGCAAAGCCT | 60.434 | 61.111 | 0.00 | 0.00 | 34.19 | 4.58 |
125 | 126 | 3.497031 | GGCGTCGGTAGCAAAGCC | 61.497 | 66.667 | 0.00 | 0.00 | 37.61 | 4.35 |
126 | 127 | 2.036764 | GATGGCGTCGGTAGCAAAGC | 62.037 | 60.000 | 0.00 | 0.00 | 36.08 | 3.51 |
127 | 128 | 1.752501 | CGATGGCGTCGGTAGCAAAG | 61.753 | 60.000 | 21.01 | 0.00 | 46.47 | 2.77 |
128 | 129 | 1.807981 | CGATGGCGTCGGTAGCAAA | 60.808 | 57.895 | 21.01 | 0.00 | 46.47 | 3.68 |
129 | 130 | 2.202690 | CGATGGCGTCGGTAGCAA | 60.203 | 61.111 | 21.01 | 0.00 | 46.47 | 3.91 |
137 | 138 | 1.071471 | ATTCCCCATCGATGGCGTC | 59.929 | 57.895 | 34.77 | 0.00 | 46.70 | 5.19 |
138 | 139 | 1.227943 | CATTCCCCATCGATGGCGT | 60.228 | 57.895 | 34.77 | 18.48 | 46.70 | 5.68 |
139 | 140 | 2.620112 | GCATTCCCCATCGATGGCG | 61.620 | 63.158 | 34.77 | 27.95 | 46.70 | 5.69 |
140 | 141 | 2.270986 | GGCATTCCCCATCGATGGC | 61.271 | 63.158 | 34.77 | 22.82 | 46.70 | 4.40 |
142 | 143 | 0.534877 | TTCGGCATTCCCCATCGATG | 60.535 | 55.000 | 18.76 | 18.76 | 0.00 | 3.84 |
143 | 144 | 0.250467 | CTTCGGCATTCCCCATCGAT | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.59 |
144 | 145 | 1.146041 | CTTCGGCATTCCCCATCGA | 59.854 | 57.895 | 0.00 | 0.00 | 0.00 | 3.59 |
145 | 146 | 1.893808 | CCTTCGGCATTCCCCATCG | 60.894 | 63.158 | 0.00 | 0.00 | 0.00 | 3.84 |
146 | 147 | 0.106719 | TTCCTTCGGCATTCCCCATC | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
147 | 148 | 0.334676 | TTTCCTTCGGCATTCCCCAT | 59.665 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
148 | 149 | 0.113385 | TTTTCCTTCGGCATTCCCCA | 59.887 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
149 | 150 | 1.204704 | CTTTTTCCTTCGGCATTCCCC | 59.795 | 52.381 | 0.00 | 0.00 | 0.00 | 4.81 |
150 | 151 | 2.094700 | GTCTTTTTCCTTCGGCATTCCC | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.97 |
151 | 152 | 2.094700 | GGTCTTTTTCCTTCGGCATTCC | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
152 | 153 | 2.820197 | AGGTCTTTTTCCTTCGGCATTC | 59.180 | 45.455 | 0.00 | 0.00 | 30.18 | 2.67 |
153 | 154 | 2.820197 | GAGGTCTTTTTCCTTCGGCATT | 59.180 | 45.455 | 0.00 | 0.00 | 35.20 | 3.56 |
154 | 155 | 2.437413 | GAGGTCTTTTTCCTTCGGCAT | 58.563 | 47.619 | 0.00 | 0.00 | 35.20 | 4.40 |
155 | 156 | 1.876416 | CGAGGTCTTTTTCCTTCGGCA | 60.876 | 52.381 | 0.00 | 0.00 | 35.20 | 5.69 |
156 | 157 | 0.796927 | CGAGGTCTTTTTCCTTCGGC | 59.203 | 55.000 | 0.00 | 0.00 | 35.20 | 5.54 |
157 | 158 | 2.067013 | GTCGAGGTCTTTTTCCTTCGG | 58.933 | 52.381 | 0.00 | 0.00 | 35.20 | 4.30 |
158 | 159 | 2.987821 | GAGTCGAGGTCTTTTTCCTTCG | 59.012 | 50.000 | 0.00 | 0.00 | 35.20 | 3.79 |
159 | 160 | 3.327626 | GGAGTCGAGGTCTTTTTCCTTC | 58.672 | 50.000 | 0.00 | 0.00 | 35.20 | 3.46 |
160 | 161 | 2.038689 | GGGAGTCGAGGTCTTTTTCCTT | 59.961 | 50.000 | 0.00 | 0.00 | 35.20 | 3.36 |
161 | 162 | 1.624312 | GGGAGTCGAGGTCTTTTTCCT | 59.376 | 52.381 | 0.00 | 0.00 | 38.09 | 3.36 |
162 | 163 | 1.338864 | GGGGAGTCGAGGTCTTTTTCC | 60.339 | 57.143 | 0.00 | 0.00 | 0.00 | 3.13 |
163 | 164 | 1.338864 | GGGGGAGTCGAGGTCTTTTTC | 60.339 | 57.143 | 0.00 | 0.00 | 0.00 | 2.29 |
164 | 165 | 0.691332 | GGGGGAGTCGAGGTCTTTTT | 59.309 | 55.000 | 0.00 | 0.00 | 0.00 | 1.94 |
165 | 166 | 0.473117 | TGGGGGAGTCGAGGTCTTTT | 60.473 | 55.000 | 0.00 | 0.00 | 0.00 | 2.27 |
166 | 167 | 0.473117 | TTGGGGGAGTCGAGGTCTTT | 60.473 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
167 | 168 | 0.473117 | TTTGGGGGAGTCGAGGTCTT | 60.473 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
168 | 169 | 0.473117 | TTTTGGGGGAGTCGAGGTCT | 60.473 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
169 | 170 | 0.618981 | ATTTTGGGGGAGTCGAGGTC | 59.381 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
170 | 171 | 1.073098 | AATTTTGGGGGAGTCGAGGT | 58.927 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
171 | 172 | 1.818674 | CAAATTTTGGGGGAGTCGAGG | 59.181 | 52.381 | 0.97 | 0.00 | 0.00 | 4.63 |
183 | 184 | 7.837202 | AACACTCATATGCATCCAAATTTTG | 57.163 | 32.000 | 0.19 | 1.99 | 0.00 | 2.44 |
184 | 185 | 8.851541 | AAAACACTCATATGCATCCAAATTTT | 57.148 | 26.923 | 0.19 | 0.56 | 0.00 | 1.82 |
185 | 186 | 8.723311 | CAAAAACACTCATATGCATCCAAATTT | 58.277 | 29.630 | 0.19 | 0.00 | 0.00 | 1.82 |
186 | 187 | 7.879160 | ACAAAAACACTCATATGCATCCAAATT | 59.121 | 29.630 | 0.19 | 0.00 | 0.00 | 1.82 |
187 | 188 | 7.388437 | ACAAAAACACTCATATGCATCCAAAT | 58.612 | 30.769 | 0.19 | 0.00 | 0.00 | 2.32 |
188 | 189 | 6.757237 | ACAAAAACACTCATATGCATCCAAA | 58.243 | 32.000 | 0.19 | 0.00 | 0.00 | 3.28 |
189 | 190 | 6.343716 | ACAAAAACACTCATATGCATCCAA | 57.656 | 33.333 | 0.19 | 0.00 | 0.00 | 3.53 |
190 | 191 | 5.981088 | ACAAAAACACTCATATGCATCCA | 57.019 | 34.783 | 0.19 | 0.00 | 0.00 | 3.41 |
191 | 192 | 8.810427 | CATTTACAAAAACACTCATATGCATCC | 58.190 | 33.333 | 0.19 | 0.00 | 0.00 | 3.51 |
192 | 193 | 9.357652 | ACATTTACAAAAACACTCATATGCATC | 57.642 | 29.630 | 0.19 | 0.00 | 0.00 | 3.91 |
193 | 194 | 9.709495 | AACATTTACAAAAACACTCATATGCAT | 57.291 | 25.926 | 3.79 | 3.79 | 0.00 | 3.96 |
194 | 195 | 9.539825 | AAACATTTACAAAAACACTCATATGCA | 57.460 | 25.926 | 0.00 | 0.00 | 0.00 | 3.96 |
233 | 234 | 9.019656 | TGTGTGCAAAAGGTCATATATTAACTT | 57.980 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
234 | 235 | 8.574251 | TGTGTGCAAAAGGTCATATATTAACT | 57.426 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
235 | 236 | 9.632807 | TTTGTGTGCAAAAGGTCATATATTAAC | 57.367 | 29.630 | 0.00 | 0.00 | 41.15 | 2.01 |
272 | 273 | 8.974060 | TGTTTACAGATGTAGTTTTCTTTCCT | 57.026 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
311 | 312 | 3.132289 | ACGTTGTGGGTCACTAGATATGG | 59.868 | 47.826 | 0.00 | 0.00 | 35.11 | 2.74 |
312 | 313 | 4.360563 | GACGTTGTGGGTCACTAGATATG | 58.639 | 47.826 | 0.00 | 0.00 | 35.11 | 1.78 |
317 | 318 | 0.388134 | CCGACGTTGTGGGTCACTAG | 60.388 | 60.000 | 1.30 | 0.00 | 35.11 | 2.57 |
320 | 321 | 1.663702 | CTCCGACGTTGTGGGTCAC | 60.664 | 63.158 | 1.30 | 0.00 | 33.14 | 3.67 |
328 | 329 | 6.578020 | TTGCTAAATAATACTCCGACGTTG | 57.422 | 37.500 | 0.00 | 0.00 | 0.00 | 4.10 |
335 | 336 | 9.284968 | TCCTAATTGCTTGCTAAATAATACTCC | 57.715 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
348 | 349 | 1.555967 | TTGGGGTCCTAATTGCTTGC | 58.444 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
350 | 351 | 5.602561 | GGATTTATTGGGGTCCTAATTGCTT | 59.397 | 40.000 | 3.97 | 0.00 | 0.00 | 3.91 |
355 | 356 | 3.984770 | TCGGGATTTATTGGGGTCCTAAT | 59.015 | 43.478 | 4.10 | 4.10 | 0.00 | 1.73 |
358 | 359 | 1.901648 | TCGGGATTTATTGGGGTCCT | 58.098 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
376 | 377 | 4.262976 | GCCATGATCAAATTCGAAACGTTC | 59.737 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
384 | 385 | 4.600032 | TCGATTTGCCATGATCAAATTCG | 58.400 | 39.130 | 19.69 | 20.64 | 42.30 | 3.34 |
386 | 387 | 6.400568 | ACTTTCGATTTGCCATGATCAAATT | 58.599 | 32.000 | 19.69 | 9.47 | 42.30 | 1.82 |
393 | 394 | 5.452078 | AGAAAACTTTCGATTTGCCATGA | 57.548 | 34.783 | 0.00 | 0.00 | 41.92 | 3.07 |
395 | 396 | 7.029563 | GTCATAGAAAACTTTCGATTTGCCAT | 58.970 | 34.615 | 0.00 | 0.00 | 41.92 | 4.40 |
396 | 397 | 6.016693 | TGTCATAGAAAACTTTCGATTTGCCA | 60.017 | 34.615 | 0.00 | 0.00 | 41.92 | 4.92 |
408 | 409 | 8.507249 | GCATCACTAAAGTTGTCATAGAAAACT | 58.493 | 33.333 | 0.00 | 0.00 | 41.34 | 2.66 |
414 | 415 | 6.036470 | TCTCGCATCACTAAAGTTGTCATAG | 58.964 | 40.000 | 0.00 | 0.00 | 0.00 | 2.23 |
416 | 417 | 4.820897 | TCTCGCATCACTAAAGTTGTCAT | 58.179 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
419 | 420 | 4.627467 | GTCATCTCGCATCACTAAAGTTGT | 59.373 | 41.667 | 0.00 | 0.00 | 0.00 | 3.32 |
420 | 421 | 4.867047 | AGTCATCTCGCATCACTAAAGTTG | 59.133 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
423 | 424 | 7.706281 | AATTAGTCATCTCGCATCACTAAAG | 57.294 | 36.000 | 0.00 | 0.00 | 34.18 | 1.85 |
432 | 433 | 6.394809 | TGTCAACTAAATTAGTCATCTCGCA | 58.605 | 36.000 | 6.09 | 0.00 | 38.26 | 5.10 |
434 | 435 | 7.063426 | TGCTTGTCAACTAAATTAGTCATCTCG | 59.937 | 37.037 | 6.09 | 0.00 | 38.26 | 4.04 |
445 | 447 | 7.092716 | GGATTTGTCATGCTTGTCAACTAAAT | 58.907 | 34.615 | 10.88 | 3.78 | 31.94 | 1.40 |
463 | 465 | 4.877378 | AACACATTGAGCATGGATTTGT | 57.123 | 36.364 | 0.00 | 0.00 | 37.17 | 2.83 |
487 | 489 | 6.017026 | TGACACACGCAATAAATTTCTGGTAA | 60.017 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
494 | 496 | 9.255304 | AGTTTAATTGACACACGCAATAAATTT | 57.745 | 25.926 | 0.00 | 0.00 | 35.06 | 1.82 |
497 | 499 | 7.702772 | ACAAGTTTAATTGACACACGCAATAAA | 59.297 | 29.630 | 0.00 | 0.00 | 35.06 | 1.40 |
501 | 503 | 4.987832 | ACAAGTTTAATTGACACACGCAA | 58.012 | 34.783 | 0.00 | 0.00 | 34.20 | 4.85 |
502 | 504 | 4.095036 | TGACAAGTTTAATTGACACACGCA | 59.905 | 37.500 | 0.00 | 0.00 | 31.51 | 5.24 |
504 | 506 | 5.851177 | GGATGACAAGTTTAATTGACACACG | 59.149 | 40.000 | 0.00 | 0.00 | 37.60 | 4.49 |
506 | 508 | 7.519809 | CGAAGGATGACAAGTTTAATTGACACA | 60.520 | 37.037 | 0.00 | 0.00 | 37.60 | 3.72 |
523 | 525 | 1.883926 | TGTTGACTCGACGAAGGATGA | 59.116 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
531 | 533 | 5.186404 | ACGATAATTTTGTTGACTCGACG | 57.814 | 39.130 | 0.00 | 0.00 | 0.00 | 5.12 |
532 | 534 | 5.060077 | TCGACGATAATTTTGTTGACTCGAC | 59.940 | 40.000 | 0.00 | 0.00 | 28.48 | 4.20 |
533 | 535 | 5.155643 | TCGACGATAATTTTGTTGACTCGA | 58.844 | 37.500 | 0.00 | 0.00 | 28.48 | 4.04 |
534 | 536 | 5.430220 | TCGACGATAATTTTGTTGACTCG | 57.570 | 39.130 | 0.00 | 0.00 | 28.48 | 4.18 |
535 | 537 | 7.915107 | GTTTTCGACGATAATTTTGTTGACTC | 58.085 | 34.615 | 0.00 | 0.00 | 32.64 | 3.36 |
573 | 575 | 2.167662 | CAACGTTAAGGATTTGGCCCT | 58.832 | 47.619 | 0.00 | 0.00 | 35.03 | 5.19 |
574 | 576 | 1.890489 | ACAACGTTAAGGATTTGGCCC | 59.110 | 47.619 | 0.00 | 0.00 | 0.00 | 5.80 |
575 | 577 | 3.653539 | AACAACGTTAAGGATTTGGCC | 57.346 | 42.857 | 0.00 | 0.00 | 0.00 | 5.36 |
576 | 578 | 8.920509 | ATTATAAACAACGTTAAGGATTTGGC | 57.079 | 30.769 | 0.00 | 0.00 | 0.00 | 4.52 |
604 | 606 | 7.430211 | CGTCAATCAATGTCCATAATTGTTCAG | 59.570 | 37.037 | 11.78 | 3.71 | 36.58 | 3.02 |
608 | 610 | 5.357878 | AGCGTCAATCAATGTCCATAATTGT | 59.642 | 36.000 | 11.78 | 0.00 | 36.58 | 2.71 |
619 | 621 | 6.961554 | GGAAAAGTAGTAAGCGTCAATCAATG | 59.038 | 38.462 | 0.00 | 0.00 | 0.00 | 2.82 |
630 | 632 | 7.544915 | GGGTCGATATATGGAAAAGTAGTAAGC | 59.455 | 40.741 | 0.00 | 0.00 | 0.00 | 3.09 |
631 | 633 | 8.582437 | TGGGTCGATATATGGAAAAGTAGTAAG | 58.418 | 37.037 | 0.00 | 0.00 | 0.00 | 2.34 |
674 | 679 | 4.271291 | GCTGTCTCGTCTGGATATTTTTCC | 59.729 | 45.833 | 0.00 | 0.00 | 36.24 | 3.13 |
679 | 686 | 2.292016 | CTCGCTGTCTCGTCTGGATATT | 59.708 | 50.000 | 0.00 | 0.00 | 0.00 | 1.28 |
684 | 691 | 1.427419 | CTCTCGCTGTCTCGTCTGG | 59.573 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
702 | 709 | 4.567159 | CCAACTTGCTCTTATCTTACGACC | 59.433 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
716 | 723 | 3.831637 | TGGTGGGCCCAACTTGCT | 61.832 | 61.111 | 39.04 | 0.00 | 41.50 | 3.91 |
828 | 835 | 0.765510 | GGGACTTGGGTTGTCTGTCT | 59.234 | 55.000 | 0.00 | 0.00 | 35.04 | 3.41 |
837 | 844 | 0.494095 | AAGAGGAGAGGGACTTGGGT | 59.506 | 55.000 | 0.00 | 0.00 | 41.55 | 4.51 |
838 | 845 | 1.199615 | GAAGAGGAGAGGGACTTGGG | 58.800 | 60.000 | 0.00 | 0.00 | 41.55 | 4.12 |
840 | 847 | 1.199615 | GGGAAGAGGAGAGGGACTTG | 58.800 | 60.000 | 0.00 | 0.00 | 41.55 | 3.16 |
843 | 850 | 0.030603 | ATGGGGAAGAGGAGAGGGAC | 60.031 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
844 | 851 | 0.725133 | AATGGGGAAGAGGAGAGGGA | 59.275 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
845 | 852 | 1.492599 | GAAATGGGGAAGAGGAGAGGG | 59.507 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
918 | 932 | 3.951037 | CGAGAGAGAGATGGGAGAAGAAA | 59.049 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
925 | 942 | 0.548510 | TGAGCGAGAGAGAGATGGGA | 59.451 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
926 | 943 | 1.541147 | GATGAGCGAGAGAGAGATGGG | 59.459 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
959 | 976 | 0.676782 | TCTCTGTCTGTCGATGGCGA | 60.677 | 55.000 | 0.00 | 0.00 | 45.71 | 5.54 |
963 | 980 | 2.016318 | AGCTCTCTCTGTCTGTCGATG | 58.984 | 52.381 | 0.00 | 0.00 | 0.00 | 3.84 |
965 | 982 | 2.419436 | CCTAGCTCTCTCTGTCTGTCGA | 60.419 | 54.545 | 0.00 | 0.00 | 0.00 | 4.20 |
1179 | 1204 | 3.991536 | GAGGAAGGCCGAGACGTGC | 62.992 | 68.421 | 0.00 | 0.00 | 39.96 | 5.34 |
1347 | 1395 | 0.687757 | AGATACCGAGCCAAGCCAGA | 60.688 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1468 | 1530 | 2.117156 | AATGTGCTCGGCCATCTGC | 61.117 | 57.895 | 2.24 | 0.92 | 40.16 | 4.26 |
1511 | 1575 | 7.040823 | ACCAAGCAAGTCATAGAAAGAAAGAAG | 60.041 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
1543 | 1611 | 2.006888 | GCTAACAGCAACCGCATAGAA | 58.993 | 47.619 | 0.00 | 0.00 | 41.89 | 2.10 |
1601 | 2089 | 2.537792 | CTTTCAGGCCACATGCAGCG | 62.538 | 60.000 | 5.01 | 0.00 | 43.89 | 5.18 |
1642 | 2130 | 3.333680 | AGGTAACCATCAATCAACCCAGT | 59.666 | 43.478 | 0.00 | 0.00 | 37.17 | 4.00 |
1645 | 2135 | 2.427095 | GCAGGTAACCATCAATCAACCC | 59.573 | 50.000 | 0.00 | 0.00 | 37.17 | 4.11 |
1660 | 2216 | 2.099592 | GCATTGCTATTGCTTGCAGGTA | 59.900 | 45.455 | 17.52 | 0.00 | 43.42 | 3.08 |
1661 | 2217 | 1.134907 | GCATTGCTATTGCTTGCAGGT | 60.135 | 47.619 | 17.52 | 0.00 | 43.42 | 4.00 |
1669 | 2225 | 4.632688 | ACCAAAAGATTGCATTGCTATTGC | 59.367 | 37.500 | 10.49 | 0.00 | 40.55 | 3.56 |
1751 | 5948 | 5.095691 | AGCGCATAATTTCAAGTTATCGG | 57.904 | 39.130 | 11.47 | 0.00 | 0.00 | 4.18 |
1754 | 5951 | 5.822519 | TCTGGAGCGCATAATTTCAAGTTAT | 59.177 | 36.000 | 11.47 | 0.00 | 0.00 | 1.89 |
1947 | 7886 | 4.928661 | AGTTAGCTACTGAAACATTGCG | 57.071 | 40.909 | 0.00 | 0.00 | 35.19 | 4.85 |
1993 | 7933 | 8.922058 | AATCAATGAGCAAGCTTGTTAATTAG | 57.078 | 30.769 | 26.55 | 18.06 | 0.00 | 1.73 |
1994 | 7934 | 9.709495 | AAAATCAATGAGCAAGCTTGTTAATTA | 57.291 | 25.926 | 26.55 | 14.17 | 0.00 | 1.40 |
1995 | 7935 | 8.500773 | CAAAATCAATGAGCAAGCTTGTTAATT | 58.499 | 29.630 | 26.55 | 21.89 | 0.00 | 1.40 |
1996 | 7936 | 7.360607 | GCAAAATCAATGAGCAAGCTTGTTAAT | 60.361 | 33.333 | 26.55 | 17.25 | 0.00 | 1.40 |
2021 | 7962 | 0.928922 | CAGCGATCATCAGTGACTGC | 59.071 | 55.000 | 7.93 | 0.00 | 37.14 | 4.40 |
2116 | 8062 | 1.952296 | AGAAGCAGCAACTGGTGAAAG | 59.048 | 47.619 | 12.89 | 0.00 | 45.66 | 2.62 |
2278 | 8238 | 8.461222 | TCGAAACATAGATCTTCAATGCAAAAT | 58.539 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
2430 | 8404 | 9.520515 | ACAAAAATAACAGATCAGGACTATGTT | 57.479 | 29.630 | 0.00 | 0.00 | 37.77 | 2.71 |
2549 | 8523 | 4.495844 | GGTCTGACGAAAAAGACAAGTTGG | 60.496 | 45.833 | 7.96 | 0.00 | 43.81 | 3.77 |
2707 | 8712 | 1.992170 | ATGCGTCGACCTTAAGTCAC | 58.008 | 50.000 | 10.58 | 1.29 | 46.69 | 3.67 |
2716 | 8721 | 1.992170 | AGTTCAGTAATGCGTCGACC | 58.008 | 50.000 | 10.58 | 3.43 | 0.00 | 4.79 |
2737 | 8742 | 1.021968 | AACTGACGGTGAAAGCAACC | 58.978 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2742 | 8747 | 2.663279 | CCGAAAACTGACGGTGAAAG | 57.337 | 50.000 | 0.00 | 0.00 | 43.53 | 2.62 |
2773 | 8821 | 4.965119 | ACTGAACTTGTGAACTGAAACC | 57.035 | 40.909 | 0.00 | 0.00 | 0.00 | 3.27 |
2774 | 8822 | 6.837992 | TGTTACTGAACTTGTGAACTGAAAC | 58.162 | 36.000 | 0.00 | 0.00 | 36.45 | 2.78 |
2829 | 8879 | 7.976135 | ATATTTGCATAGGACATCTCAAGAC | 57.024 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2845 | 8895 | 9.926158 | TTTAAGAGCTGAAATGAAATATTTGCA | 57.074 | 25.926 | 5.17 | 4.30 | 0.00 | 4.08 |
2866 | 8917 | 6.259387 | ACTGACACGGTAACTTTTCCTTTAAG | 59.741 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
2895 | 8953 | 2.168936 | TGCAATGGGGAAATCAGCATTC | 59.831 | 45.455 | 0.00 | 0.00 | 0.00 | 2.67 |
2912 | 8972 | 2.035704 | CACACTTAAGCCCACAATGCAA | 59.964 | 45.455 | 1.29 | 0.00 | 0.00 | 4.08 |
2914 | 8974 | 1.613437 | ACACACTTAAGCCCACAATGC | 59.387 | 47.619 | 1.29 | 0.00 | 0.00 | 3.56 |
2919 | 8979 | 2.256117 | ACAGACACACTTAAGCCCAC | 57.744 | 50.000 | 1.29 | 0.00 | 0.00 | 4.61 |
2932 | 8992 | 7.313646 | GCTTAGAAACTAGACACATACAGACA | 58.686 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
3045 | 9106 | 1.493871 | AGCCATCTTGGAGATTCTGGG | 59.506 | 52.381 | 0.00 | 0.00 | 40.96 | 4.45 |
3233 | 9299 | 3.727419 | GCAGGTGCTTGCCTTTATG | 57.273 | 52.632 | 0.00 | 0.00 | 38.13 | 1.90 |
3256 | 9322 | 5.240891 | TGCAGTTATTCAGTCCAGAAGAAG | 58.759 | 41.667 | 0.00 | 0.00 | 30.24 | 2.85 |
3285 | 9360 | 9.314321 | GCTGAAAGTACATAACACATACAGTAT | 57.686 | 33.333 | 0.00 | 0.00 | 35.30 | 2.12 |
3286 | 9361 | 8.528643 | AGCTGAAAGTACATAACACATACAGTA | 58.471 | 33.333 | 0.00 | 0.00 | 35.30 | 2.74 |
3287 | 9362 | 7.386851 | AGCTGAAAGTACATAACACATACAGT | 58.613 | 34.615 | 0.00 | 0.00 | 35.30 | 3.55 |
3288 | 9363 | 7.834068 | AGCTGAAAGTACATAACACATACAG | 57.166 | 36.000 | 0.00 | 0.00 | 35.30 | 2.74 |
3289 | 9364 | 9.366216 | CTAAGCTGAAAGTACATAACACATACA | 57.634 | 33.333 | 0.00 | 0.00 | 35.30 | 2.29 |
3290 | 9365 | 9.367444 | ACTAAGCTGAAAGTACATAACACATAC | 57.633 | 33.333 | 0.00 | 0.00 | 35.30 | 2.39 |
3291 | 9366 | 9.582431 | GACTAAGCTGAAAGTACATAACACATA | 57.418 | 33.333 | 0.00 | 0.00 | 35.30 | 2.29 |
3292 | 9367 | 8.094548 | TGACTAAGCTGAAAGTACATAACACAT | 58.905 | 33.333 | 0.00 | 0.00 | 35.30 | 3.21 |
3324 | 9399 | 6.864360 | AATGTGTGCAATGTTAAAGCAAAT | 57.136 | 29.167 | 0.00 | 0.00 | 40.35 | 2.32 |
3339 | 9427 | 0.383231 | GCCCTCTGCATAATGTGTGC | 59.617 | 55.000 | 0.00 | 0.00 | 42.81 | 4.57 |
3340 | 9428 | 1.027357 | GGCCCTCTGCATAATGTGTG | 58.973 | 55.000 | 0.00 | 0.00 | 43.89 | 3.82 |
3341 | 9429 | 0.464373 | CGGCCCTCTGCATAATGTGT | 60.464 | 55.000 | 0.00 | 0.00 | 43.89 | 3.72 |
3342 | 9430 | 0.464373 | ACGGCCCTCTGCATAATGTG | 60.464 | 55.000 | 0.00 | 0.00 | 43.89 | 3.21 |
3343 | 9431 | 1.128200 | TACGGCCCTCTGCATAATGT | 58.872 | 50.000 | 0.00 | 0.00 | 43.89 | 2.71 |
3344 | 9432 | 1.873591 | GTTACGGCCCTCTGCATAATG | 59.126 | 52.381 | 0.00 | 0.00 | 43.89 | 1.90 |
3345 | 9433 | 1.488812 | TGTTACGGCCCTCTGCATAAT | 59.511 | 47.619 | 0.00 | 0.00 | 43.89 | 1.28 |
3347 | 9435 | 1.070134 | GATGTTACGGCCCTCTGCATA | 59.930 | 52.381 | 0.00 | 0.00 | 43.89 | 3.14 |
3356 | 9444 | 0.878416 | TGTTTGCTGATGTTACGGCC | 59.122 | 50.000 | 0.00 | 0.00 | 40.96 | 6.13 |
3359 | 9447 | 3.980775 | CCCTTTTGTTTGCTGATGTTACG | 59.019 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
3398 | 9486 | 5.516996 | CGGAACTTCTTTTGGTTTAACTCC | 58.483 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
3484 | 9572 | 6.547141 | ACCACAATCACCATTATTACAGGATG | 59.453 | 38.462 | 0.00 | 0.00 | 46.00 | 3.51 |
3485 | 9573 | 6.672593 | ACCACAATCACCATTATTACAGGAT | 58.327 | 36.000 | 0.00 | 0.00 | 0.00 | 3.24 |
3486 | 9574 | 6.073447 | ACCACAATCACCATTATTACAGGA | 57.927 | 37.500 | 0.00 | 0.00 | 0.00 | 3.86 |
3487 | 9575 | 6.826231 | TGTACCACAATCACCATTATTACAGG | 59.174 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
3490 | 9578 | 8.276252 | AGTTGTACCACAATCACCATTATTAC | 57.724 | 34.615 | 0.00 | 0.00 | 40.59 | 1.89 |
3491 | 9579 | 8.735315 | CAAGTTGTACCACAATCACCATTATTA | 58.265 | 33.333 | 0.00 | 0.00 | 40.59 | 0.98 |
3492 | 9580 | 7.232534 | ACAAGTTGTACCACAATCACCATTATT | 59.767 | 33.333 | 6.75 | 0.00 | 40.59 | 1.40 |
3493 | 9581 | 6.719370 | ACAAGTTGTACCACAATCACCATTAT | 59.281 | 34.615 | 6.75 | 0.00 | 40.59 | 1.28 |
3581 | 9675 | 4.493220 | GCAGCTTTGAAGATACTACTTGCG | 60.493 | 45.833 | 0.00 | 0.00 | 0.00 | 4.85 |
3673 | 9786 | 4.070716 | ACCTGAAGAGCTTTTCATGTCAG | 58.929 | 43.478 | 19.02 | 7.86 | 36.55 | 3.51 |
3876 | 10082 | 0.324460 | ACAGGGAGGAGGGAGTTACG | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3883 | 10089 | 1.834263 | CTAGTTTCACAGGGAGGAGGG | 59.166 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
4063 | 10561 | 2.369860 | TCAGCAGATTGACAGAACAGGT | 59.630 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
4067 | 10565 | 5.368256 | AATGTTCAGCAGATTGACAGAAC | 57.632 | 39.130 | 0.00 | 0.00 | 36.73 | 3.01 |
4145 | 10734 | 9.875691 | GAGACCATGCTCAATATGTAATACATA | 57.124 | 33.333 | 14.64 | 14.64 | 38.72 | 2.29 |
4195 | 10784 | 6.938030 | AGACCAAACAATTTAACTGACGGATA | 59.062 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
4247 | 10836 | 6.149474 | GTGTCAAGTTAGTATTTCAGGCACAT | 59.851 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
4348 | 10944 | 8.969260 | TGAACTATGATGAGTATGCAAATTCT | 57.031 | 30.769 | 0.00 | 0.00 | 0.00 | 2.40 |
4387 | 10996 | 1.093972 | CCAGTGGCAATGCGACATAA | 58.906 | 50.000 | 21.63 | 0.00 | 39.66 | 1.90 |
4394 | 11003 | 0.179119 | GAATGCTCCAGTGGCAATGC | 60.179 | 55.000 | 9.87 | 6.80 | 43.14 | 3.56 |
4399 | 11008 | 2.042686 | TATGTGAATGCTCCAGTGGC | 57.957 | 50.000 | 3.51 | 0.00 | 0.00 | 5.01 |
4400 | 11009 | 2.684881 | GGTTATGTGAATGCTCCAGTGG | 59.315 | 50.000 | 1.40 | 1.40 | 0.00 | 4.00 |
4454 | 11065 | 0.532573 | GACTCTTGATGCTCACCGGA | 59.467 | 55.000 | 9.46 | 0.00 | 0.00 | 5.14 |
4502 | 11113 | 0.850100 | TCCCAAAGGAAGTGAGCCAA | 59.150 | 50.000 | 0.00 | 0.00 | 40.08 | 4.52 |
4657 | 11281 | 3.838317 | ACACAAAGGTACCTGCAGAGATA | 59.162 | 43.478 | 17.14 | 1.41 | 0.00 | 1.98 |
4690 | 11315 | 0.666274 | CGAGTGTAAAGGCGCTCACA | 60.666 | 55.000 | 7.64 | 3.46 | 43.89 | 3.58 |
4705 | 11330 | 1.200252 | CAGAGGATGACGAACACGAGT | 59.800 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
4842 | 11467 | 4.761975 | TCGTCTTGGACTTGTACAAAACT | 58.238 | 39.130 | 10.03 | 0.00 | 0.00 | 2.66 |
5111 | 11751 | 2.758979 | GTCGGACTCAAGGAACTGGATA | 59.241 | 50.000 | 0.00 | 0.00 | 38.01 | 2.59 |
5129 | 11769 | 4.059459 | GTGACGCCGCTGTTGTCG | 62.059 | 66.667 | 0.00 | 0.00 | 35.40 | 4.35 |
5223 | 11863 | 7.390823 | ACAAAAACAACCCAAACTAAGACAAT | 58.609 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
5264 | 11904 | 2.140717 | GTACAACACAGCGCTAAACCT | 58.859 | 47.619 | 10.99 | 0.00 | 0.00 | 3.50 |
5265 | 11905 | 1.196127 | GGTACAACACAGCGCTAAACC | 59.804 | 52.381 | 10.99 | 6.40 | 0.00 | 3.27 |
5266 | 11906 | 2.140717 | AGGTACAACACAGCGCTAAAC | 58.859 | 47.619 | 10.99 | 0.31 | 0.00 | 2.01 |
5267 | 11907 | 2.409975 | GAGGTACAACACAGCGCTAAA | 58.590 | 47.619 | 10.99 | 0.00 | 0.00 | 1.85 |
5268 | 11908 | 1.337447 | GGAGGTACAACACAGCGCTAA | 60.337 | 52.381 | 10.99 | 0.00 | 0.00 | 3.09 |
5269 | 11909 | 0.245539 | GGAGGTACAACACAGCGCTA | 59.754 | 55.000 | 10.99 | 0.00 | 0.00 | 4.26 |
5276 | 11916 | 5.105064 | TCAGCCTAAATAGGAGGTACAACAC | 60.105 | 44.000 | 10.71 | 0.00 | 46.63 | 3.32 |
5305 | 11945 | 3.149196 | GCCCAAAACAGAGAGACATGAA | 58.851 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
5306 | 11946 | 2.106338 | TGCCCAAAACAGAGAGACATGA | 59.894 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 |
5316 | 11956 | 1.411977 | TGAACATGGTGCCCAAAACAG | 59.588 | 47.619 | 0.00 | 0.00 | 36.95 | 3.16 |
5319 | 11959 | 1.270732 | GCATGAACATGGTGCCCAAAA | 60.271 | 47.619 | 15.15 | 0.00 | 36.95 | 2.44 |
5330 | 11970 | 2.494471 | CAACCAGTGATGGCATGAACAT | 59.506 | 45.455 | 3.81 | 0.00 | 0.00 | 2.71 |
5364 | 12004 | 6.443849 | AGTTGAAATGAGAATACAGAGGGGTA | 59.556 | 38.462 | 0.00 | 0.00 | 0.00 | 3.69 |
5373 | 12013 | 9.823647 | TGATAGAAGGAGTTGAAATGAGAATAC | 57.176 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
5411 | 12051 | 2.226330 | TGGTGAATACGCAAAGCTTGT | 58.774 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
5434 | 12074 | 7.013369 | GTCTTCTGTTCTGTTTACCCATCTTTT | 59.987 | 37.037 | 0.00 | 0.00 | 0.00 | 2.27 |
5515 | 12184 | 5.951204 | TCATTGTCCAAGGCCATCAATATA | 58.049 | 37.500 | 5.01 | 0.00 | 0.00 | 0.86 |
5517 | 12186 | 4.248174 | TCATTGTCCAAGGCCATCAATA | 57.752 | 40.909 | 5.01 | 0.00 | 0.00 | 1.90 |
5607 | 12276 | 6.210078 | CCGATGATTAGACAGTTCCTAGAAC | 58.790 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5669 | 12338 | 0.755698 | ACACGTCTCACACTCCCACT | 60.756 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
5682 | 12351 | 2.540973 | GGAAAGCCAACAAAGACACGTC | 60.541 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
5754 | 12423 | 1.453928 | CCAAGGAGGGAATTCGGCC | 60.454 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
5758 | 12427 | 0.106469 | GGGCTCCAAGGAGGGAATTC | 60.106 | 60.000 | 17.34 | 0.00 | 42.19 | 2.17 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.