Multiple sequence alignment - TraesCS1A01G403200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G403200 chr1A 100.000 4633 0 0 1 4633 566501308 566496676 0.000000e+00 8556.0
1 TraesCS1A01G403200 chr1B 93.853 3888 156 35 1 3857 657191829 657187994 0.000000e+00 5779.0
2 TraesCS1A01G403200 chr1B 97.917 48 1 0 3879 3926 657187991 657187944 2.970000e-12 84.2
3 TraesCS1A01G403200 chr1D 96.800 2281 51 12 422 2694 472540794 472538528 0.000000e+00 3788.0
4 TraesCS1A01G403200 chr1D 93.319 1422 57 22 2731 4140 472538528 472537133 0.000000e+00 2065.0
5 TraesCS1A01G403200 chr1D 92.812 320 17 3 1 319 472541457 472541143 4.220000e-125 459.0
6 TraesCS1A01G403200 chr5D 93.750 272 16 1 4265 4536 408651112 408650842 1.550000e-109 407.0
7 TraesCS1A01G403200 chr4B 94.355 248 14 0 4244 4491 548186351 548186104 9.410000e-102 381.0
8 TraesCS1A01G403200 chr7A 92.424 264 20 0 4244 4507 223686923 223686660 1.220000e-100 377.0
9 TraesCS1A01G403200 chr7A 93.333 225 15 0 4248 4472 223693145 223692921 2.670000e-87 333.0
10 TraesCS1A01G403200 chr2A 92.063 189 15 0 4244 4432 145376292 145376480 2.750000e-67 267.0
11 TraesCS1A01G403200 chr5B 91.139 158 14 0 4244 4401 490237868 490237711 1.010000e-51 215.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G403200 chr1A 566496676 566501308 4632 True 8556.0 8556 100.000000 1 4633 1 chr1A.!!$R1 4632
1 TraesCS1A01G403200 chr1B 657187944 657191829 3885 True 2931.6 5779 95.885000 1 3926 2 chr1B.!!$R1 3925
2 TraesCS1A01G403200 chr1D 472537133 472541457 4324 True 2104.0 3788 94.310333 1 4140 3 chr1D.!!$R1 4139

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
138 140 0.460722 TCGTTTCCATCCGGCGATTA 59.539 50.0 9.3 0.0 0.00 1.75 F
489 739 0.548031 AGCATGTCGGGGTGAATCAT 59.452 50.0 0.0 0.0 0.00 2.45 F
517 768 0.858583 GGTTTGCCACATTCGTTTGC 59.141 50.0 0.0 0.0 34.09 3.68 F
2349 2606 0.898320 TTTTCCTCCTGCTCCTCTCG 59.102 55.0 0.0 0.0 0.00 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1780 2033 2.122768 ACCTGGCTCCTTCATTCCTAG 58.877 52.381 0.0 0.0 0.00 3.02 R
2402 2659 0.179020 CCACTGAAGGAGTTGCACCA 60.179 55.000 0.0 0.0 29.75 4.17 R
2430 2687 7.830940 TCAACGTGTCAAAAAGTAAGTAGAA 57.169 32.000 0.0 0.0 0.00 2.10 R
4161 4456 0.109781 AATGAAATGGTCGCACGCAC 60.110 50.000 0.0 0.0 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 133 2.106683 GCCAGGTCGTTTCCATCCG 61.107 63.158 0.00 0.00 0.00 4.18
138 140 0.460722 TCGTTTCCATCCGGCGATTA 59.539 50.000 9.30 0.00 0.00 1.75
147 149 1.193323 TCCGGCGATTACCTTGGTTA 58.807 50.000 9.30 0.00 0.00 2.85
176 178 0.685097 CGTTTGGGAGGAGACCTTCA 59.315 55.000 0.00 0.00 31.76 3.02
177 179 1.338200 CGTTTGGGAGGAGACCTTCAG 60.338 57.143 0.00 0.00 31.76 3.02
187 189 3.835395 AGGAGACCTTCAGAATTTCTCGT 59.165 43.478 12.16 10.70 34.67 4.18
194 196 2.959516 TCAGAATTTCTCGTCGCACAT 58.040 42.857 0.00 0.00 0.00 3.21
322 326 4.775253 TGTTGGGATTTATTGGGAAGTTCC 59.225 41.667 13.99 13.99 35.23 3.62
324 328 2.956333 GGGATTTATTGGGAAGTTCCGG 59.044 50.000 15.80 0.00 37.43 5.14
332 336 1.235281 GGGAAGTTCCGGAGTTGTGC 61.235 60.000 15.80 0.00 37.43 4.57
361 365 3.075134 GGGAGCCTAGAATTCAATGGGAT 59.925 47.826 8.44 0.00 0.00 3.85
363 367 5.143369 GGAGCCTAGAATTCAATGGGATTT 58.857 41.667 8.44 0.00 0.00 2.17
364 368 5.010415 GGAGCCTAGAATTCAATGGGATTTG 59.990 44.000 8.44 0.00 0.00 2.32
365 369 5.522641 AGCCTAGAATTCAATGGGATTTGT 58.477 37.500 8.44 0.00 0.00 2.83
366 370 5.960202 AGCCTAGAATTCAATGGGATTTGTT 59.040 36.000 8.44 0.00 0.00 2.83
367 371 6.097412 AGCCTAGAATTCAATGGGATTTGTTC 59.903 38.462 8.44 0.00 0.00 3.18
381 385 4.556233 GATTTGTTCTTGTTGGTTAGGCC 58.444 43.478 0.00 0.00 37.90 5.19
386 390 2.420466 CTTGTTGGTTAGGCCGGGGT 62.420 60.000 2.18 0.00 41.21 4.95
387 391 1.132554 TTGTTGGTTAGGCCGGGGTA 61.133 55.000 2.18 0.00 41.21 3.69
388 392 1.222661 GTTGGTTAGGCCGGGGTAG 59.777 63.158 2.18 0.00 41.21 3.18
389 393 1.996748 TTGGTTAGGCCGGGGTAGG 60.997 63.158 2.18 0.00 41.21 3.18
390 394 3.166394 GGTTAGGCCGGGGTAGGG 61.166 72.222 2.18 0.00 0.00 3.53
391 395 3.166394 GTTAGGCCGGGGTAGGGG 61.166 72.222 2.18 0.00 0.00 4.79
392 396 4.502538 TTAGGCCGGGGTAGGGGG 62.503 72.222 2.18 0.00 0.00 5.40
455 705 5.324409 TCCTACACTGGCAAAATCAGAATT 58.676 37.500 0.00 0.00 36.22 2.17
457 707 6.071952 TCCTACACTGGCAAAATCAGAATTTC 60.072 38.462 0.00 0.00 33.93 2.17
489 739 0.548031 AGCATGTCGGGGTGAATCAT 59.452 50.000 0.00 0.00 0.00 2.45
506 757 2.565925 ATGGGGATGGGGTTTGCCA 61.566 57.895 0.00 0.00 36.17 4.92
517 768 0.858583 GGTTTGCCACATTCGTTTGC 59.141 50.000 0.00 0.00 34.09 3.68
571 822 4.871933 AATTTGACCCATGGACACTTTC 57.128 40.909 15.22 0.01 0.00 2.62
578 829 5.710099 TGACCCATGGACACTTTCTTTTATC 59.290 40.000 15.22 0.00 0.00 1.75
580 831 6.074648 ACCCATGGACACTTTCTTTTATCAA 58.925 36.000 15.22 0.00 0.00 2.57
637 890 1.215382 CGAGGGTTGTCGAGCATGA 59.785 57.895 0.00 0.00 42.85 3.07
646 899 3.443099 TGTCGAGCATGACAAGGATAG 57.557 47.619 8.41 0.00 45.40 2.08
731 984 5.333566 TCTTTCCAATGGGTTTCCTAGTT 57.666 39.130 0.00 0.00 34.93 2.24
883 1136 5.827797 TGGTTTCTATTTTGCACTTGTCTCT 59.172 36.000 0.00 0.00 0.00 3.10
973 1226 7.540474 TGTTGGGATCTAATACTGTATCTCC 57.460 40.000 0.00 5.67 0.00 3.71
1041 1294 1.330655 ACATCTCTGGCGGTTCGGAT 61.331 55.000 0.00 0.00 0.00 4.18
1209 1462 2.086054 AGTGCGATGAACTGGAAGAC 57.914 50.000 0.00 0.00 37.43 3.01
1780 2033 1.208052 TGGAGGCTCTAGCACATTCAC 59.792 52.381 15.23 0.00 44.36 3.18
1797 2050 2.832838 TCACTAGGAATGAAGGAGCCA 58.167 47.619 0.00 0.00 0.00 4.75
2349 2606 0.898320 TTTTCCTCCTGCTCCTCTCG 59.102 55.000 0.00 0.00 0.00 4.04
2402 2659 4.229582 TCACTTAACAATAAGGGGGATGCT 59.770 41.667 0.00 0.00 41.93 3.79
2430 2687 3.041946 ACTCCTTCAGTGGTCTGTTCTT 58.958 45.455 0.00 0.00 41.91 2.52
2542 2799 7.372451 TGGGAATTCACTGTTAAAATACTCG 57.628 36.000 9.56 0.00 0.00 4.18
2601 2858 9.506018 TTGATGTATCAGGATGTATTTGGTATG 57.494 33.333 0.00 0.00 38.19 2.39
2621 2878 9.088987 TGGTATGCATGAGTTATCAGTAATCTA 57.911 33.333 10.16 0.00 39.29 1.98
2622 2879 9.929180 GGTATGCATGAGTTATCAGTAATCTAA 57.071 33.333 10.16 0.00 39.29 2.10
2699 2956 0.741915 AAAAACTTTCGCCGAGGCAA 59.258 45.000 15.03 5.05 42.06 4.52
2736 2994 7.557719 ACTTTATAATCTGCTAAATGGTGCTGT 59.442 33.333 0.00 0.00 0.00 4.40
2755 3013 5.049474 TGCTGTTGTCTGTGAATGATACAAC 60.049 40.000 9.15 9.15 46.32 3.32
2760 3018 4.996758 TGTCTGTGAATGATACAACACTGG 59.003 41.667 0.00 0.00 34.60 4.00
2790 3050 1.741770 GTAGCACCCAACTGCCTCG 60.742 63.158 0.00 0.00 37.96 4.63
2847 3111 9.950680 GTTAATGTACATGGTGGATATTTTCTG 57.049 33.333 9.63 0.00 0.00 3.02
2851 3115 7.171653 TGTACATGGTGGATATTTTCTGTTGA 58.828 34.615 0.00 0.00 0.00 3.18
2871 3135 9.334693 CTGTTGATTTCTGTGCTTAAATAGTTC 57.665 33.333 0.00 0.00 0.00 3.01
2893 3157 7.287696 AGTTCCATGTTTAGTTTTCCTGTCATT 59.712 33.333 0.00 0.00 0.00 2.57
2911 3175 8.748412 CCTGTCATTTTATCCAGTTTCCATTTA 58.252 33.333 0.00 0.00 0.00 1.40
2994 3259 1.272781 CTTGAAGAACCGCGAGCTAG 58.727 55.000 8.23 0.00 0.00 3.42
3422 3696 1.751927 CAACCCAGGATCAGCAGCC 60.752 63.158 0.00 0.00 0.00 4.85
3423 3697 3.335356 AACCCAGGATCAGCAGCCG 62.335 63.158 0.00 0.00 0.00 5.52
3476 3759 3.026694 ACCCCAGTATAAGGTCGTGTAC 58.973 50.000 0.00 0.00 0.00 2.90
3640 3923 2.428530 CACAGCAGCAGTAGAGGATGTA 59.571 50.000 0.00 0.00 0.00 2.29
3643 3926 2.697751 AGCAGCAGTAGAGGATGTAAGG 59.302 50.000 0.00 0.00 0.00 2.69
3690 3973 5.473162 TGCTCTTGTATGCAATGTGTACTTT 59.527 36.000 0.00 0.00 36.15 2.66
3716 3999 4.078516 GAACCACCCTCCGGACCG 62.079 72.222 6.99 6.99 0.00 4.79
3842 4135 6.595716 GTCATAAAGAGATTTGTGGTGCTACT 59.404 38.462 0.00 0.00 0.00 2.57
3877 4170 1.449246 GCTGCCAGTAGCCTCTGTG 60.449 63.158 0.00 0.00 42.71 3.66
3927 4220 1.656441 CTTGCTTGGACCTGTGCAC 59.344 57.895 10.75 10.75 35.01 4.57
3928 4221 1.077140 TTGCTTGGACCTGTGCACA 60.077 52.632 20.37 20.37 35.01 4.57
3929 4222 0.467844 TTGCTTGGACCTGTGCACAT 60.468 50.000 22.00 6.27 35.01 3.21
3930 4223 1.174078 TGCTTGGACCTGTGCACATG 61.174 55.000 22.00 20.38 0.00 3.21
3956 4249 6.038382 TGTTGGTTTGCGTTTCTAAGTGAATA 59.962 34.615 0.00 0.00 34.24 1.75
4019 4314 2.062519 GAGAGCGTGGACAAGAAGAAC 58.937 52.381 0.00 0.00 0.00 3.01
4030 4325 2.641815 ACAAGAAGAACAGATGGAGGCT 59.358 45.455 0.00 0.00 0.00 4.58
4054 4349 4.907879 AACAGAGGAAGTTGAAAAGCTG 57.092 40.909 0.00 0.00 0.00 4.24
4055 4350 4.156455 ACAGAGGAAGTTGAAAAGCTGA 57.844 40.909 0.00 0.00 0.00 4.26
4062 4357 4.876107 GGAAGTTGAAAAGCTGATCGGATA 59.124 41.667 5.48 0.00 0.00 2.59
4118 4413 1.608717 ATCCTGTGCTGAGACCGACC 61.609 60.000 0.00 0.00 0.00 4.79
4129 4424 0.243095 AGACCGACCGTGCTAGTTTC 59.757 55.000 0.00 0.00 0.00 2.78
4136 4431 1.816835 ACCGTGCTAGTTTCTCGATCA 59.183 47.619 0.00 0.00 0.00 2.92
4140 4435 3.241364 CGTGCTAGTTTCTCGATCAAACG 60.241 47.826 12.19 0.00 38.54 3.60
4141 4436 3.060895 GTGCTAGTTTCTCGATCAAACGG 59.939 47.826 12.19 10.74 38.54 4.44
4142 4437 2.029365 GCTAGTTTCTCGATCAAACGGC 59.971 50.000 16.80 16.80 38.54 5.68
4143 4438 2.457366 AGTTTCTCGATCAAACGGCT 57.543 45.000 12.19 0.00 38.54 5.52
4144 4439 2.338500 AGTTTCTCGATCAAACGGCTC 58.662 47.619 12.19 0.00 38.54 4.70
4145 4440 1.059264 GTTTCTCGATCAAACGGCTCG 59.941 52.381 4.80 0.00 0.00 5.03
4146 4441 1.076533 TTCTCGATCAAACGGCTCGC 61.077 55.000 0.00 0.00 32.62 5.03
4147 4442 2.508439 TCGATCAAACGGCTCGCC 60.508 61.111 0.00 0.00 32.62 5.54
4148 4443 3.564027 CGATCAAACGGCTCGCCC 61.564 66.667 1.72 0.00 0.00 6.13
4149 4444 3.202706 GATCAAACGGCTCGCCCC 61.203 66.667 1.72 0.00 0.00 5.80
4150 4445 3.682292 GATCAAACGGCTCGCCCCT 62.682 63.158 1.72 0.00 0.00 4.79
4151 4446 3.682292 ATCAAACGGCTCGCCCCTC 62.682 63.158 1.72 0.00 0.00 4.30
4176 4471 4.383602 GCGTGCGTGCGACCATTT 62.384 61.111 5.04 0.00 0.00 2.32
4177 4472 2.202171 CGTGCGTGCGACCATTTC 60.202 61.111 0.00 0.00 0.00 2.17
4178 4473 2.942879 GTGCGTGCGACCATTTCA 59.057 55.556 0.00 0.00 0.00 2.69
4179 4474 1.501741 GTGCGTGCGACCATTTCAT 59.498 52.632 0.00 0.00 0.00 2.57
4180 4475 0.109781 GTGCGTGCGACCATTTCATT 60.110 50.000 0.00 0.00 0.00 2.57
4181 4476 0.595588 TGCGTGCGACCATTTCATTT 59.404 45.000 0.00 0.00 0.00 2.32
4182 4477 1.000827 TGCGTGCGACCATTTCATTTT 60.001 42.857 0.00 0.00 0.00 1.82
4183 4478 2.058057 GCGTGCGACCATTTCATTTTT 58.942 42.857 0.00 0.00 0.00 1.94
4184 4479 2.090503 GCGTGCGACCATTTCATTTTTC 59.909 45.455 0.00 0.00 0.00 2.29
4185 4480 3.304257 CGTGCGACCATTTCATTTTTCA 58.696 40.909 0.00 0.00 0.00 2.69
4186 4481 3.119463 CGTGCGACCATTTCATTTTTCAC 59.881 43.478 0.00 0.00 0.00 3.18
4187 4482 3.428534 GTGCGACCATTTCATTTTTCACC 59.571 43.478 0.00 0.00 0.00 4.02
4188 4483 2.993220 GCGACCATTTCATTTTTCACCC 59.007 45.455 0.00 0.00 0.00 4.61
4189 4484 3.584834 CGACCATTTCATTTTTCACCCC 58.415 45.455 0.00 0.00 0.00 4.95
4190 4485 3.616317 CGACCATTTCATTTTTCACCCCC 60.616 47.826 0.00 0.00 0.00 5.40
4191 4486 3.321950 ACCATTTCATTTTTCACCCCCA 58.678 40.909 0.00 0.00 0.00 4.96
4192 4487 3.718956 ACCATTTCATTTTTCACCCCCAA 59.281 39.130 0.00 0.00 0.00 4.12
4193 4488 4.353489 ACCATTTCATTTTTCACCCCCAAT 59.647 37.500 0.00 0.00 0.00 3.16
4194 4489 4.701171 CCATTTCATTTTTCACCCCCAATG 59.299 41.667 0.00 0.00 0.00 2.82
4195 4490 5.514484 CCATTTCATTTTTCACCCCCAATGA 60.514 40.000 0.00 0.00 34.54 2.57
4196 4491 4.888326 TTCATTTTTCACCCCCAATGAG 57.112 40.909 0.00 0.00 37.06 2.90
4197 4492 4.125124 TCATTTTTCACCCCCAATGAGA 57.875 40.909 0.00 0.00 32.01 3.27
4198 4493 4.487804 TCATTTTTCACCCCCAATGAGAA 58.512 39.130 0.00 0.00 32.01 2.87
4199 4494 4.527816 TCATTTTTCACCCCCAATGAGAAG 59.472 41.667 0.00 0.00 32.01 2.85
4200 4495 3.611025 TTTTCACCCCCAATGAGAAGT 57.389 42.857 0.00 0.00 0.00 3.01
4201 4496 2.584835 TTCACCCCCAATGAGAAGTG 57.415 50.000 0.00 0.00 0.00 3.16
4202 4497 1.741028 TCACCCCCAATGAGAAGTGA 58.259 50.000 0.00 0.00 32.15 3.41
4203 4498 1.630369 TCACCCCCAATGAGAAGTGAG 59.370 52.381 0.00 0.00 31.10 3.51
4204 4499 1.630369 CACCCCCAATGAGAAGTGAGA 59.370 52.381 0.00 0.00 0.00 3.27
4205 4500 2.040278 CACCCCCAATGAGAAGTGAGAA 59.960 50.000 0.00 0.00 0.00 2.87
4206 4501 2.922283 ACCCCCAATGAGAAGTGAGAAT 59.078 45.455 0.00 0.00 0.00 2.40
4207 4502 3.054065 ACCCCCAATGAGAAGTGAGAATC 60.054 47.826 0.00 0.00 0.00 2.52
4222 4517 5.768980 TGAGAATCATCCCTCTTCTTGTT 57.231 39.130 0.00 0.00 42.56 2.83
4223 4518 6.131972 TGAGAATCATCCCTCTTCTTGTTT 57.868 37.500 0.00 0.00 42.56 2.83
4224 4519 7.257790 TGAGAATCATCCCTCTTCTTGTTTA 57.742 36.000 0.00 0.00 42.56 2.01
4225 4520 7.689299 TGAGAATCATCCCTCTTCTTGTTTAA 58.311 34.615 0.00 0.00 42.56 1.52
4226 4521 7.607991 TGAGAATCATCCCTCTTCTTGTTTAAC 59.392 37.037 0.00 0.00 42.56 2.01
4227 4522 6.887002 AGAATCATCCCTCTTCTTGTTTAACC 59.113 38.462 0.00 0.00 0.00 2.85
4228 4523 4.918588 TCATCCCTCTTCTTGTTTAACCC 58.081 43.478 0.00 0.00 0.00 4.11
4229 4524 3.412237 TCCCTCTTCTTGTTTAACCCG 57.588 47.619 0.00 0.00 0.00 5.28
4230 4525 2.039348 TCCCTCTTCTTGTTTAACCCGG 59.961 50.000 0.00 0.00 0.00 5.73
4231 4526 2.039348 CCCTCTTCTTGTTTAACCCGGA 59.961 50.000 0.73 0.00 0.00 5.14
4232 4527 3.335579 CCTCTTCTTGTTTAACCCGGAG 58.664 50.000 0.73 0.00 0.00 4.63
4233 4528 2.742589 CTCTTCTTGTTTAACCCGGAGC 59.257 50.000 0.73 0.00 0.00 4.70
4234 4529 1.810755 CTTCTTGTTTAACCCGGAGCC 59.189 52.381 0.73 0.00 0.00 4.70
4235 4530 0.320946 TCTTGTTTAACCCGGAGCCG 60.321 55.000 0.73 1.06 39.44 5.52
4236 4531 1.918868 CTTGTTTAACCCGGAGCCGC 61.919 60.000 0.73 0.00 38.24 6.53
4237 4532 3.129502 GTTTAACCCGGAGCCGCC 61.130 66.667 0.73 0.00 38.24 6.13
4238 4533 4.413565 TTTAACCCGGAGCCGCCC 62.414 66.667 0.73 0.00 38.24 6.13
4250 4545 4.722700 CCGCCCCCACACTCCTTG 62.723 72.222 0.00 0.00 0.00 3.61
4253 4548 3.260100 CCCCCACACTCCTTGCCT 61.260 66.667 0.00 0.00 0.00 4.75
4254 4549 2.034687 CCCCACACTCCTTGCCTG 59.965 66.667 0.00 0.00 0.00 4.85
4255 4550 2.034687 CCCACACTCCTTGCCTGG 59.965 66.667 0.00 0.00 0.00 4.45
4256 4551 2.528818 CCCACACTCCTTGCCTGGA 61.529 63.158 0.00 0.00 34.52 3.86
4274 4569 2.125673 GCACGTAGCCGATGTGGT 60.126 61.111 9.86 0.00 44.16 4.16
4275 4570 2.165301 GCACGTAGCCGATGTGGTC 61.165 63.158 9.86 0.00 44.16 4.02
4276 4571 1.511305 CACGTAGCCGATGTGGTCT 59.489 57.895 0.00 0.00 40.83 3.85
4277 4572 0.525668 CACGTAGCCGATGTGGTCTC 60.526 60.000 0.00 0.00 40.83 3.36
4278 4573 1.298413 CGTAGCCGATGTGGTCTCG 60.298 63.158 0.00 0.00 41.21 4.04
4283 4578 3.822192 CGATGTGGTCTCGGCCGA 61.822 66.667 29.03 29.03 32.58 5.54
4284 4579 2.577059 GATGTGGTCTCGGCCGAA 59.423 61.111 30.53 17.19 0.00 4.30
4285 4580 1.144057 GATGTGGTCTCGGCCGAAT 59.856 57.895 30.53 18.66 0.00 3.34
4286 4581 0.876342 GATGTGGTCTCGGCCGAATC 60.876 60.000 30.53 22.83 0.00 2.52
4287 4582 1.613317 ATGTGGTCTCGGCCGAATCA 61.613 55.000 30.53 22.17 0.00 2.57
4288 4583 1.519455 GTGGTCTCGGCCGAATCAG 60.519 63.158 30.53 17.75 0.00 2.90
4289 4584 1.680989 TGGTCTCGGCCGAATCAGA 60.681 57.895 30.53 19.97 0.00 3.27
4290 4585 1.254975 TGGTCTCGGCCGAATCAGAA 61.255 55.000 30.53 10.03 0.00 3.02
4291 4586 0.528684 GGTCTCGGCCGAATCAGAAG 60.529 60.000 30.53 15.74 0.00 2.85
4292 4587 1.141881 TCTCGGCCGAATCAGAAGC 59.858 57.895 30.53 0.00 0.00 3.86
4293 4588 2.202743 TCGGCCGAATCAGAAGCG 60.203 61.111 28.99 0.00 0.00 4.68
4294 4589 2.509336 CGGCCGAATCAGAAGCGT 60.509 61.111 24.07 0.00 0.00 5.07
4295 4590 2.517450 CGGCCGAATCAGAAGCGTC 61.517 63.158 24.07 0.00 0.00 5.19
4296 4591 2.517450 GGCCGAATCAGAAGCGTCG 61.517 63.158 0.00 0.00 0.00 5.12
4297 4592 2.998667 CCGAATCAGAAGCGTCGC 59.001 61.111 9.80 9.80 32.21 5.19
4298 4593 2.610308 CGAATCAGAAGCGTCGCG 59.390 61.111 12.30 0.00 0.00 5.87
4299 4594 2.152699 CGAATCAGAAGCGTCGCGT 61.153 57.895 12.30 8.85 0.00 6.01
4300 4595 1.626388 GAATCAGAAGCGTCGCGTC 59.374 57.895 23.14 23.14 37.32 5.19
4301 4596 1.071019 GAATCAGAAGCGTCGCGTCA 61.071 55.000 29.97 14.53 39.36 4.35
4302 4597 0.666274 AATCAGAAGCGTCGCGTCAA 60.666 50.000 29.97 19.76 39.36 3.18
4303 4598 1.073216 ATCAGAAGCGTCGCGTCAAG 61.073 55.000 29.97 22.40 39.36 3.02
4304 4599 2.430921 AGAAGCGTCGCGTCAAGG 60.431 61.111 29.97 0.00 39.36 3.61
4305 4600 2.733593 GAAGCGTCGCGTCAAGGT 60.734 61.111 25.13 0.00 37.05 3.50
4306 4601 2.717809 GAAGCGTCGCGTCAAGGTC 61.718 63.158 25.13 6.43 37.05 3.85
4307 4602 3.208884 AAGCGTCGCGTCAAGGTCT 62.209 57.895 12.30 0.00 0.00 3.85
4308 4603 1.859427 AAGCGTCGCGTCAAGGTCTA 61.859 55.000 12.30 0.00 0.00 2.59
4309 4604 1.443194 GCGTCGCGTCAAGGTCTAA 60.443 57.895 5.77 0.00 0.00 2.10
4310 4605 0.801067 GCGTCGCGTCAAGGTCTAAT 60.801 55.000 5.77 0.00 0.00 1.73
4311 4606 0.914551 CGTCGCGTCAAGGTCTAATG 59.085 55.000 5.77 0.00 0.00 1.90
4312 4607 0.645868 GTCGCGTCAAGGTCTAATGC 59.354 55.000 5.77 0.00 0.00 3.56
4313 4608 0.530744 TCGCGTCAAGGTCTAATGCT 59.469 50.000 5.77 0.00 0.00 3.79
4314 4609 0.924090 CGCGTCAAGGTCTAATGCTC 59.076 55.000 0.00 0.00 0.00 4.26
4315 4610 1.735700 CGCGTCAAGGTCTAATGCTCA 60.736 52.381 0.00 0.00 0.00 4.26
4316 4611 2.555199 GCGTCAAGGTCTAATGCTCAT 58.445 47.619 0.00 0.00 0.00 2.90
4317 4612 2.939103 GCGTCAAGGTCTAATGCTCATT 59.061 45.455 0.49 0.49 34.93 2.57
4318 4613 3.001736 GCGTCAAGGTCTAATGCTCATTC 59.998 47.826 0.00 0.00 32.50 2.67
4319 4614 4.183865 CGTCAAGGTCTAATGCTCATTCA 58.816 43.478 0.00 0.00 32.50 2.57
4320 4615 4.269603 CGTCAAGGTCTAATGCTCATTCAG 59.730 45.833 0.00 0.00 32.50 3.02
4321 4616 5.423015 GTCAAGGTCTAATGCTCATTCAGA 58.577 41.667 0.00 0.00 32.50 3.27
4331 4626 1.747709 CTCATTCAGAGCCTTGGGTG 58.252 55.000 0.00 0.00 37.59 4.61
4332 4627 1.004044 CTCATTCAGAGCCTTGGGTGT 59.996 52.381 0.00 0.00 37.59 4.16
4333 4628 1.171308 CATTCAGAGCCTTGGGTGTG 58.829 55.000 9.35 9.35 0.00 3.82
4334 4629 0.610232 ATTCAGAGCCTTGGGTGTGC 60.610 55.000 10.59 0.00 0.00 4.57
4335 4630 2.674380 CAGAGCCTTGGGTGTGCC 60.674 66.667 3.14 0.00 0.00 5.01
4336 4631 3.177884 AGAGCCTTGGGTGTGCCA 61.178 61.111 0.00 0.00 36.17 4.92
4337 4632 2.203480 GAGCCTTGGGTGTGCCAA 60.203 61.111 0.00 0.00 36.17 4.52
4338 4633 2.521708 AGCCTTGGGTGTGCCAAC 60.522 61.111 0.00 0.00 36.17 3.77
4339 4634 3.977244 GCCTTGGGTGTGCCAACG 61.977 66.667 0.00 0.00 36.17 4.10
4340 4635 2.518349 CCTTGGGTGTGCCAACGT 60.518 61.111 0.00 0.00 36.17 3.99
4341 4636 1.228003 CCTTGGGTGTGCCAACGTA 60.228 57.895 0.00 0.00 36.17 3.57
4342 4637 0.820074 CCTTGGGTGTGCCAACGTAA 60.820 55.000 0.00 0.00 36.17 3.18
4343 4638 1.243902 CTTGGGTGTGCCAACGTAAT 58.756 50.000 0.00 0.00 36.17 1.89
4344 4639 1.611491 CTTGGGTGTGCCAACGTAATT 59.389 47.619 0.00 0.00 36.17 1.40
4345 4640 0.955178 TGGGTGTGCCAACGTAATTG 59.045 50.000 0.00 0.00 38.12 2.32
4346 4641 0.955905 GGGTGTGCCAACGTAATTGT 59.044 50.000 0.00 0.00 36.47 2.71
4347 4642 1.068816 GGGTGTGCCAACGTAATTGTC 60.069 52.381 0.00 0.00 36.47 3.18
4348 4643 1.068816 GGTGTGCCAACGTAATTGTCC 60.069 52.381 0.00 0.00 36.47 4.02
4349 4644 1.604755 GTGTGCCAACGTAATTGTCCA 59.395 47.619 0.00 0.00 36.47 4.02
4350 4645 2.033550 GTGTGCCAACGTAATTGTCCAA 59.966 45.455 0.00 0.00 36.47 3.53
4351 4646 2.688446 TGTGCCAACGTAATTGTCCAAA 59.312 40.909 0.00 0.00 36.47 3.28
4352 4647 3.047093 GTGCCAACGTAATTGTCCAAAC 58.953 45.455 0.00 0.00 36.47 2.93
4353 4648 2.952978 TGCCAACGTAATTGTCCAAACT 59.047 40.909 0.00 0.00 36.47 2.66
4354 4649 3.243234 TGCCAACGTAATTGTCCAAACTG 60.243 43.478 0.00 0.00 36.47 3.16
4355 4650 3.003897 GCCAACGTAATTGTCCAAACTGA 59.996 43.478 0.00 0.00 36.47 3.41
4356 4651 4.320935 GCCAACGTAATTGTCCAAACTGAT 60.321 41.667 0.00 0.00 36.47 2.90
4357 4652 5.106475 GCCAACGTAATTGTCCAAACTGATA 60.106 40.000 0.00 0.00 36.47 2.15
4358 4653 6.568844 GCCAACGTAATTGTCCAAACTGATAA 60.569 38.462 0.00 0.00 36.47 1.75
4359 4654 7.535139 CCAACGTAATTGTCCAAACTGATAAT 58.465 34.615 0.00 0.00 36.47 1.28
4360 4655 7.484641 CCAACGTAATTGTCCAAACTGATAATG 59.515 37.037 0.00 0.00 36.47 1.90
4361 4656 7.681939 ACGTAATTGTCCAAACTGATAATGT 57.318 32.000 0.00 0.00 0.00 2.71
4362 4657 8.780846 ACGTAATTGTCCAAACTGATAATGTA 57.219 30.769 0.00 0.00 0.00 2.29
4363 4658 9.221933 ACGTAATTGTCCAAACTGATAATGTAA 57.778 29.630 0.00 0.00 0.00 2.41
4364 4659 9.485591 CGTAATTGTCCAAACTGATAATGTAAC 57.514 33.333 0.00 0.00 0.00 2.50
4365 4660 9.783256 GTAATTGTCCAAACTGATAATGTAACC 57.217 33.333 0.00 0.00 0.00 2.85
4366 4661 6.489127 TTGTCCAAACTGATAATGTAACCG 57.511 37.500 0.00 0.00 0.00 4.44
4367 4662 5.553123 TGTCCAAACTGATAATGTAACCGT 58.447 37.500 0.00 0.00 0.00 4.83
4368 4663 5.410132 TGTCCAAACTGATAATGTAACCGTG 59.590 40.000 0.00 0.00 0.00 4.94
4369 4664 4.938832 TCCAAACTGATAATGTAACCGTGG 59.061 41.667 0.00 0.00 0.00 4.94
4370 4665 4.698304 CCAAACTGATAATGTAACCGTGGT 59.302 41.667 0.00 0.00 0.00 4.16
4371 4666 5.875910 CCAAACTGATAATGTAACCGTGGTA 59.124 40.000 0.00 0.00 0.00 3.25
4372 4667 6.036735 CCAAACTGATAATGTAACCGTGGTAG 59.963 42.308 0.00 0.00 0.00 3.18
4373 4668 6.534475 AACTGATAATGTAACCGTGGTAGA 57.466 37.500 0.00 0.00 0.00 2.59
4374 4669 6.145338 ACTGATAATGTAACCGTGGTAGAG 57.855 41.667 0.00 0.00 0.00 2.43
4375 4670 5.068723 ACTGATAATGTAACCGTGGTAGAGG 59.931 44.000 0.00 0.00 0.00 3.69
4376 4671 2.685850 AATGTAACCGTGGTAGAGGC 57.314 50.000 0.00 0.00 0.00 4.70
4377 4672 0.458669 ATGTAACCGTGGTAGAGGCG 59.541 55.000 0.00 0.00 0.00 5.52
4378 4673 0.895100 TGTAACCGTGGTAGAGGCGT 60.895 55.000 0.00 0.00 0.00 5.68
4379 4674 0.244721 GTAACCGTGGTAGAGGCGTT 59.755 55.000 0.00 0.00 0.00 4.84
4380 4675 0.244450 TAACCGTGGTAGAGGCGTTG 59.756 55.000 0.00 0.00 0.00 4.10
4381 4676 1.466025 AACCGTGGTAGAGGCGTTGA 61.466 55.000 0.00 0.00 0.00 3.18
4382 4677 1.290955 CCGTGGTAGAGGCGTTGAA 59.709 57.895 0.00 0.00 0.00 2.69
4383 4678 0.108329 CCGTGGTAGAGGCGTTGAAT 60.108 55.000 0.00 0.00 0.00 2.57
4384 4679 1.674817 CCGTGGTAGAGGCGTTGAATT 60.675 52.381 0.00 0.00 0.00 2.17
4385 4680 2.073816 CGTGGTAGAGGCGTTGAATTT 58.926 47.619 0.00 0.00 0.00 1.82
4386 4681 2.159707 CGTGGTAGAGGCGTTGAATTTG 60.160 50.000 0.00 0.00 0.00 2.32
4387 4682 3.071479 GTGGTAGAGGCGTTGAATTTGA 58.929 45.455 0.00 0.00 0.00 2.69
4388 4683 3.500680 GTGGTAGAGGCGTTGAATTTGAA 59.499 43.478 0.00 0.00 0.00 2.69
4389 4684 3.500680 TGGTAGAGGCGTTGAATTTGAAC 59.499 43.478 0.00 0.00 0.00 3.18
4399 4694 5.684550 GTTGAATTTGAACGAGGGTTACT 57.315 39.130 0.00 0.00 36.24 2.24
4400 4695 5.686834 GTTGAATTTGAACGAGGGTTACTC 58.313 41.667 0.00 0.00 43.02 2.59
4401 4696 4.963373 TGAATTTGAACGAGGGTTACTCA 58.037 39.130 0.00 0.00 46.98 3.41
4402 4697 5.369833 TGAATTTGAACGAGGGTTACTCAA 58.630 37.500 0.00 0.00 46.98 3.02
4403 4698 6.001460 TGAATTTGAACGAGGGTTACTCAAT 58.999 36.000 0.00 0.00 46.98 2.57
4404 4699 5.880054 ATTTGAACGAGGGTTACTCAATG 57.120 39.130 0.00 0.00 46.98 2.82
4405 4700 4.610605 TTGAACGAGGGTTACTCAATGA 57.389 40.909 0.00 0.00 46.98 2.57
4406 4701 4.819105 TGAACGAGGGTTACTCAATGAT 57.181 40.909 0.00 0.00 46.98 2.45
4407 4702 5.160607 TGAACGAGGGTTACTCAATGATT 57.839 39.130 0.00 0.00 46.98 2.57
4408 4703 4.935205 TGAACGAGGGTTACTCAATGATTG 59.065 41.667 0.00 0.00 46.98 2.67
4409 4704 3.270877 ACGAGGGTTACTCAATGATTGC 58.729 45.455 0.00 0.00 46.98 3.56
4410 4705 3.270027 CGAGGGTTACTCAATGATTGCA 58.730 45.455 0.00 0.00 46.98 4.08
4411 4706 3.310774 CGAGGGTTACTCAATGATTGCAG 59.689 47.826 0.00 2.10 46.98 4.41
4412 4707 3.019564 AGGGTTACTCAATGATTGCAGC 58.980 45.455 0.00 0.00 0.00 5.25
4413 4708 2.754552 GGGTTACTCAATGATTGCAGCA 59.245 45.455 0.00 0.00 0.00 4.41
4414 4709 3.428045 GGGTTACTCAATGATTGCAGCAC 60.428 47.826 0.00 1.04 0.00 4.40
4415 4710 3.428045 GGTTACTCAATGATTGCAGCACC 60.428 47.826 0.00 5.80 0.00 5.01
4416 4711 1.913778 ACTCAATGATTGCAGCACCA 58.086 45.000 0.00 0.00 0.00 4.17
4417 4712 2.241160 ACTCAATGATTGCAGCACCAA 58.759 42.857 0.00 0.00 0.00 3.67
4418 4713 2.829720 ACTCAATGATTGCAGCACCAAT 59.170 40.909 0.00 1.99 38.09 3.16
4419 4714 4.018490 ACTCAATGATTGCAGCACCAATA 58.982 39.130 0.00 0.00 35.67 1.90
4420 4715 4.142315 ACTCAATGATTGCAGCACCAATAC 60.142 41.667 0.00 0.00 35.67 1.89
4421 4716 4.018490 TCAATGATTGCAGCACCAATACT 58.982 39.130 0.00 0.00 35.67 2.12
4422 4717 4.463539 TCAATGATTGCAGCACCAATACTT 59.536 37.500 0.00 0.00 35.67 2.24
4423 4718 5.651576 TCAATGATTGCAGCACCAATACTTA 59.348 36.000 0.00 0.00 35.67 2.24
4424 4719 6.152492 TCAATGATTGCAGCACCAATACTTAA 59.848 34.615 0.00 0.00 35.67 1.85
4425 4720 6.720112 ATGATTGCAGCACCAATACTTAAT 57.280 33.333 0.00 0.00 35.67 1.40
4426 4721 5.893687 TGATTGCAGCACCAATACTTAATG 58.106 37.500 0.00 0.00 35.67 1.90
4427 4722 5.651576 TGATTGCAGCACCAATACTTAATGA 59.348 36.000 0.00 0.00 35.67 2.57
4428 4723 5.973899 TTGCAGCACCAATACTTAATGAA 57.026 34.783 0.00 0.00 0.00 2.57
4429 4724 6.528537 TTGCAGCACCAATACTTAATGAAT 57.471 33.333 0.00 0.00 0.00 2.57
4430 4725 5.893687 TGCAGCACCAATACTTAATGAATG 58.106 37.500 0.00 0.00 0.00 2.67
4431 4726 5.418524 TGCAGCACCAATACTTAATGAATGT 59.581 36.000 0.00 0.00 0.00 2.71
4432 4727 5.973565 GCAGCACCAATACTTAATGAATGTC 59.026 40.000 0.00 0.00 0.00 3.06
4433 4728 6.194463 CAGCACCAATACTTAATGAATGTCG 58.806 40.000 0.00 0.00 0.00 4.35
4434 4729 6.037062 CAGCACCAATACTTAATGAATGTCGA 59.963 38.462 0.00 0.00 0.00 4.20
4435 4730 6.597672 AGCACCAATACTTAATGAATGTCGAA 59.402 34.615 0.00 0.00 0.00 3.71
4436 4731 6.907212 GCACCAATACTTAATGAATGTCGAAG 59.093 38.462 0.00 0.00 0.00 3.79
4437 4732 7.414098 GCACCAATACTTAATGAATGTCGAAGT 60.414 37.037 0.00 0.00 34.78 3.01
4438 4733 8.116753 CACCAATACTTAATGAATGTCGAAGTC 58.883 37.037 0.00 0.00 32.75 3.01
4439 4734 8.041323 ACCAATACTTAATGAATGTCGAAGTCT 58.959 33.333 0.00 0.00 32.75 3.24
4440 4735 9.529325 CCAATACTTAATGAATGTCGAAGTCTA 57.471 33.333 0.00 0.00 32.75 2.59
4445 4740 9.141400 ACTTAATGAATGTCGAAGTCTACTTTC 57.859 33.333 0.00 5.25 36.11 2.62
4446 4741 9.140286 CTTAATGAATGTCGAAGTCTACTTTCA 57.860 33.333 13.24 13.24 41.27 2.69
4447 4742 7.962964 AATGAATGTCGAAGTCTACTTTCAA 57.037 32.000 14.26 3.89 40.76 2.69
4448 4743 7.962964 ATGAATGTCGAAGTCTACTTTCAAA 57.037 32.000 14.26 0.00 40.76 2.69
4449 4744 7.962964 TGAATGTCGAAGTCTACTTTCAAAT 57.037 32.000 10.15 0.00 37.04 2.32
4450 4745 8.378172 TGAATGTCGAAGTCTACTTTCAAATT 57.622 30.769 10.15 0.00 37.04 1.82
4451 4746 8.836413 TGAATGTCGAAGTCTACTTTCAAATTT 58.164 29.630 10.15 0.00 37.04 1.82
4452 4747 9.319223 GAATGTCGAAGTCTACTTTCAAATTTC 57.681 33.333 0.00 0.00 36.11 2.17
4453 4748 6.873656 TGTCGAAGTCTACTTTCAAATTTCG 58.126 36.000 0.00 0.00 36.11 3.46
4454 4749 6.073980 TGTCGAAGTCTACTTTCAAATTTCGG 60.074 38.462 0.00 0.00 37.40 4.30
4455 4750 6.145048 GTCGAAGTCTACTTTCAAATTTCGGA 59.855 38.462 0.00 0.00 37.40 4.55
4456 4751 6.702723 TCGAAGTCTACTTTCAAATTTCGGAA 59.297 34.615 0.00 0.00 37.40 4.30
4457 4752 7.225145 TCGAAGTCTACTTTCAAATTTCGGAAA 59.775 33.333 5.52 5.52 37.40 3.13
4481 4776 7.259290 AGGTACTTGTTGAACATTGTAACAG 57.741 36.000 20.75 8.83 35.91 3.16
4482 4777 6.262273 AGGTACTTGTTGAACATTGTAACAGG 59.738 38.462 20.75 11.09 37.41 4.00
4483 4778 6.038936 GGTACTTGTTGAACATTGTAACAGGT 59.961 38.462 18.43 18.43 43.80 4.00
4484 4779 7.227116 GGTACTTGTTGAACATTGTAACAGGTA 59.773 37.037 17.00 17.00 41.06 3.08
4485 4780 7.259290 ACTTGTTGAACATTGTAACAGGTAG 57.741 36.000 14.87 8.74 41.06 3.18
4486 4781 6.826741 ACTTGTTGAACATTGTAACAGGTAGT 59.173 34.615 14.87 9.21 41.06 2.73
4487 4782 6.854496 TGTTGAACATTGTAACAGGTAGTC 57.146 37.500 0.00 0.00 31.34 2.59
4488 4783 6.350103 TGTTGAACATTGTAACAGGTAGTCA 58.650 36.000 0.00 0.00 31.34 3.41
4489 4784 6.824196 TGTTGAACATTGTAACAGGTAGTCAA 59.176 34.615 0.00 0.00 31.34 3.18
4490 4785 7.337184 TGTTGAACATTGTAACAGGTAGTCAAA 59.663 33.333 0.00 0.00 31.34 2.69
4491 4786 7.254227 TGAACATTGTAACAGGTAGTCAAAC 57.746 36.000 0.00 0.00 0.00 2.93
4492 4787 6.824196 TGAACATTGTAACAGGTAGTCAAACA 59.176 34.615 0.00 0.00 0.00 2.83
4493 4788 7.500892 TGAACATTGTAACAGGTAGTCAAACAT 59.499 33.333 0.00 0.00 0.00 2.71
4494 4789 7.202016 ACATTGTAACAGGTAGTCAAACATG 57.798 36.000 0.00 0.00 37.20 3.21
4495 4790 6.206634 ACATTGTAACAGGTAGTCAAACATGG 59.793 38.462 0.00 0.00 35.53 3.66
4496 4791 5.298989 TGTAACAGGTAGTCAAACATGGT 57.701 39.130 0.00 0.00 35.53 3.55
4497 4792 5.686753 TGTAACAGGTAGTCAAACATGGTT 58.313 37.500 0.00 0.00 35.53 3.67
4498 4793 5.529430 TGTAACAGGTAGTCAAACATGGTTG 59.471 40.000 17.74 17.74 35.53 3.77
4499 4794 2.884639 ACAGGTAGTCAAACATGGTTGC 59.115 45.455 19.00 13.42 35.53 4.17
4500 4795 3.149196 CAGGTAGTCAAACATGGTTGCT 58.851 45.455 19.00 19.34 0.00 3.91
4501 4796 3.189287 CAGGTAGTCAAACATGGTTGCTC 59.811 47.826 19.00 13.46 0.00 4.26
4502 4797 3.146066 GGTAGTCAAACATGGTTGCTCA 58.854 45.455 19.00 0.00 0.00 4.26
4503 4798 3.758554 GGTAGTCAAACATGGTTGCTCAT 59.241 43.478 19.00 6.69 0.00 2.90
4505 4800 3.489355 AGTCAAACATGGTTGCTCATGA 58.511 40.909 19.00 0.00 45.30 3.07
4506 4801 3.504906 AGTCAAACATGGTTGCTCATGAG 59.495 43.478 19.00 18.84 45.30 2.90
4524 4819 2.312390 GAGCTAGTTAGGTCTGGGAGG 58.688 57.143 10.32 0.00 44.93 4.30
4525 4820 1.930914 AGCTAGTTAGGTCTGGGAGGA 59.069 52.381 0.00 0.00 0.00 3.71
4526 4821 2.091555 AGCTAGTTAGGTCTGGGAGGAG 60.092 54.545 0.00 0.00 0.00 3.69
4527 4822 2.358405 GCTAGTTAGGTCTGGGAGGAGT 60.358 54.545 0.00 0.00 0.00 3.85
4528 4823 3.117587 GCTAGTTAGGTCTGGGAGGAGTA 60.118 52.174 0.00 0.00 0.00 2.59
4529 4824 4.630676 GCTAGTTAGGTCTGGGAGGAGTAA 60.631 50.000 0.00 0.00 0.00 2.24
4530 4825 4.628661 AGTTAGGTCTGGGAGGAGTAAT 57.371 45.455 0.00 0.00 0.00 1.89
4531 4826 4.548669 AGTTAGGTCTGGGAGGAGTAATC 58.451 47.826 0.00 0.00 0.00 1.75
4532 4827 2.480642 AGGTCTGGGAGGAGTAATCC 57.519 55.000 0.00 0.00 35.99 3.01
4533 4828 1.651770 AGGTCTGGGAGGAGTAATCCA 59.348 52.381 12.54 0.00 38.70 3.41
4534 4829 1.763545 GGTCTGGGAGGAGTAATCCAC 59.236 57.143 12.54 4.88 38.70 4.02
4535 4830 2.627217 GGTCTGGGAGGAGTAATCCACT 60.627 54.545 12.54 0.00 41.47 4.00
4536 4831 3.373877 GGTCTGGGAGGAGTAATCCACTA 60.374 52.174 12.54 0.95 37.72 2.74
4537 4832 4.287552 GTCTGGGAGGAGTAATCCACTAA 58.712 47.826 12.54 0.00 37.72 2.24
4538 4833 4.715297 GTCTGGGAGGAGTAATCCACTAAA 59.285 45.833 12.54 0.00 37.72 1.85
4539 4834 5.189145 GTCTGGGAGGAGTAATCCACTAAAA 59.811 44.000 12.54 0.00 37.72 1.52
4540 4835 5.788533 TCTGGGAGGAGTAATCCACTAAAAA 59.211 40.000 12.54 0.00 37.72 1.94
4556 4851 2.174685 AAAAAGGGCCACTTCCTTGT 57.825 45.000 6.18 0.00 43.24 3.16
4557 4852 3.322191 AAAAAGGGCCACTTCCTTGTA 57.678 42.857 6.18 0.00 43.24 2.41
4558 4853 2.287977 AAAGGGCCACTTCCTTGTAC 57.712 50.000 6.18 0.00 43.24 2.90
4559 4854 1.446016 AAGGGCCACTTCCTTGTACT 58.554 50.000 6.18 0.00 42.51 2.73
4560 4855 0.984995 AGGGCCACTTCCTTGTACTC 59.015 55.000 6.18 0.00 0.00 2.59
4561 4856 0.035343 GGGCCACTTCCTTGTACTCC 60.035 60.000 4.39 0.00 0.00 3.85
4562 4857 0.035343 GGCCACTTCCTTGTACTCCC 60.035 60.000 0.00 0.00 0.00 4.30
4563 4858 0.984995 GCCACTTCCTTGTACTCCCT 59.015 55.000 0.00 0.00 0.00 4.20
4564 4859 1.066071 GCCACTTCCTTGTACTCCCTC 60.066 57.143 0.00 0.00 0.00 4.30
4565 4860 2.541466 CCACTTCCTTGTACTCCCTCT 58.459 52.381 0.00 0.00 0.00 3.69
4566 4861 2.234908 CCACTTCCTTGTACTCCCTCTG 59.765 54.545 0.00 0.00 0.00 3.35
4567 4862 2.900546 CACTTCCTTGTACTCCCTCTGT 59.099 50.000 0.00 0.00 0.00 3.41
4568 4863 3.056465 CACTTCCTTGTACTCCCTCTGTC 60.056 52.174 0.00 0.00 0.00 3.51
4569 4864 2.992847 TCCTTGTACTCCCTCTGTCA 57.007 50.000 0.00 0.00 0.00 3.58
4570 4865 2.526432 TCCTTGTACTCCCTCTGTCAC 58.474 52.381 0.00 0.00 0.00 3.67
4571 4866 2.158370 TCCTTGTACTCCCTCTGTCACA 60.158 50.000 0.00 0.00 0.00 3.58
4572 4867 2.232452 CCTTGTACTCCCTCTGTCACAG 59.768 54.545 0.00 0.00 0.00 3.66
4573 4868 2.677542 TGTACTCCCTCTGTCACAGT 57.322 50.000 4.28 0.00 32.61 3.55
4574 4869 2.958818 TGTACTCCCTCTGTCACAGTT 58.041 47.619 4.28 0.00 32.61 3.16
4575 4870 2.628178 TGTACTCCCTCTGTCACAGTTG 59.372 50.000 4.28 0.00 32.61 3.16
4576 4871 0.394565 ACTCCCTCTGTCACAGTTGC 59.605 55.000 4.28 0.00 32.61 4.17
4577 4872 0.394192 CTCCCTCTGTCACAGTTGCA 59.606 55.000 4.28 0.00 32.61 4.08
4578 4873 0.836606 TCCCTCTGTCACAGTTGCAA 59.163 50.000 4.28 0.00 32.61 4.08
4579 4874 1.211703 TCCCTCTGTCACAGTTGCAAA 59.788 47.619 4.28 0.00 32.61 3.68
4580 4875 2.023673 CCCTCTGTCACAGTTGCAAAA 58.976 47.619 4.28 0.00 32.61 2.44
4581 4876 2.426738 CCCTCTGTCACAGTTGCAAAAA 59.573 45.455 4.28 0.00 32.61 1.94
4582 4877 3.068590 CCCTCTGTCACAGTTGCAAAAAT 59.931 43.478 4.28 0.00 32.61 1.82
4583 4878 4.278170 CCCTCTGTCACAGTTGCAAAAATA 59.722 41.667 4.28 0.00 32.61 1.40
4584 4879 5.047802 CCCTCTGTCACAGTTGCAAAAATAT 60.048 40.000 4.28 0.00 32.61 1.28
4585 4880 6.088824 CCTCTGTCACAGTTGCAAAAATATC 58.911 40.000 4.28 0.00 32.61 1.63
4586 4881 6.072286 CCTCTGTCACAGTTGCAAAAATATCT 60.072 38.462 4.28 0.00 32.61 1.98
4587 4882 6.671190 TCTGTCACAGTTGCAAAAATATCTG 58.329 36.000 4.28 5.78 32.61 2.90
4588 4883 5.771469 TGTCACAGTTGCAAAAATATCTGG 58.229 37.500 14.69 6.20 0.00 3.86
4589 4884 5.163513 GTCACAGTTGCAAAAATATCTGGG 58.836 41.667 14.69 11.60 0.00 4.45
4590 4885 5.048083 GTCACAGTTGCAAAAATATCTGGGA 60.048 40.000 12.07 12.07 33.78 4.37
4591 4886 5.048083 TCACAGTTGCAAAAATATCTGGGAC 60.048 40.000 12.07 0.00 31.70 4.46
4592 4887 4.220602 ACAGTTGCAAAAATATCTGGGACC 59.779 41.667 14.69 0.00 0.00 4.46
4593 4888 4.220382 CAGTTGCAAAAATATCTGGGACCA 59.780 41.667 0.00 0.00 0.00 4.02
4594 4889 4.837860 AGTTGCAAAAATATCTGGGACCAA 59.162 37.500 0.00 0.00 0.00 3.67
4595 4890 5.306678 AGTTGCAAAAATATCTGGGACCAAA 59.693 36.000 0.00 0.00 0.00 3.28
4596 4891 5.404466 TGCAAAAATATCTGGGACCAAAG 57.596 39.130 0.00 0.00 0.00 2.77
4597 4892 4.837860 TGCAAAAATATCTGGGACCAAAGT 59.162 37.500 0.00 0.00 0.00 2.66
4598 4893 5.170748 GCAAAAATATCTGGGACCAAAGTG 58.829 41.667 0.00 0.00 0.00 3.16
4599 4894 5.723295 CAAAAATATCTGGGACCAAAGTGG 58.277 41.667 0.00 0.00 45.02 4.00
4615 4910 6.899114 CCAAAGTGGTTAGTGATTGAAGTAC 58.101 40.000 0.00 0.00 31.35 2.73
4616 4911 6.710744 CCAAAGTGGTTAGTGATTGAAGTACT 59.289 38.462 0.00 0.00 31.35 2.73
4617 4912 7.307989 CCAAAGTGGTTAGTGATTGAAGTACTG 60.308 40.741 0.00 0.00 31.35 2.74
4618 4913 6.665992 AGTGGTTAGTGATTGAAGTACTGA 57.334 37.500 0.00 0.00 0.00 3.41
4619 4914 7.062749 AGTGGTTAGTGATTGAAGTACTGAA 57.937 36.000 0.00 0.00 0.00 3.02
4620 4915 7.506114 AGTGGTTAGTGATTGAAGTACTGAAA 58.494 34.615 0.00 0.00 0.00 2.69
4621 4916 7.990886 AGTGGTTAGTGATTGAAGTACTGAAAA 59.009 33.333 0.00 0.00 0.00 2.29
4622 4917 8.784043 GTGGTTAGTGATTGAAGTACTGAAAAT 58.216 33.333 0.00 0.00 0.00 1.82
4625 4920 9.974750 GTTAGTGATTGAAGTACTGAAAATAGC 57.025 33.333 0.00 0.00 0.00 2.97
4626 4921 9.719355 TTAGTGATTGAAGTACTGAAAATAGCA 57.281 29.630 0.00 0.00 0.00 3.49
4627 4922 8.798859 AGTGATTGAAGTACTGAAAATAGCAT 57.201 30.769 0.00 0.00 0.00 3.79
4628 4923 8.887717 AGTGATTGAAGTACTGAAAATAGCATC 58.112 33.333 0.00 0.00 0.00 3.91
4629 4924 7.848051 GTGATTGAAGTACTGAAAATAGCATCG 59.152 37.037 0.00 0.00 0.00 3.84
4630 4925 6.662414 TTGAAGTACTGAAAATAGCATCGG 57.338 37.500 0.00 0.00 0.00 4.18
4631 4926 5.730550 TGAAGTACTGAAAATAGCATCGGT 58.269 37.500 0.00 0.00 38.63 4.69
4632 4927 6.170506 TGAAGTACTGAAAATAGCATCGGTT 58.829 36.000 0.00 0.00 36.58 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 2.683933 AGACCGACGGCCCAAGAT 60.684 61.111 15.39 0.00 0.00 2.40
131 133 3.317149 GGGATTTAACCAAGGTAATCGCC 59.683 47.826 15.56 10.88 33.61 5.54
138 140 1.283905 CGGGAGGGATTTAACCAAGGT 59.716 52.381 0.00 0.00 0.00 3.50
176 178 2.959516 TGATGTGCGACGAGAAATTCT 58.040 42.857 0.00 0.00 0.00 2.40
177 179 3.553511 AGATGATGTGCGACGAGAAATTC 59.446 43.478 0.00 0.00 0.00 2.17
187 189 1.068264 GCGGATCTAGATGATGTGCGA 60.068 52.381 10.74 0.00 35.14 5.10
194 196 0.482887 TCAGGGGCGGATCTAGATGA 59.517 55.000 10.74 0.00 0.00 2.92
322 326 2.094659 CCTGCTACGCACAACTCCG 61.095 63.158 0.00 0.00 33.79 4.63
324 328 0.737715 CTCCCTGCTACGCACAACTC 60.738 60.000 0.00 0.00 33.79 3.01
332 336 1.333177 ATTCTAGGCTCCCTGCTACG 58.667 55.000 0.00 0.00 42.39 3.51
342 346 5.522641 ACAAATCCCATTGAATTCTAGGCT 58.477 37.500 7.05 0.00 34.38 4.58
361 365 2.359531 CGGCCTAACCAACAAGAACAAA 59.640 45.455 0.00 0.00 39.03 2.83
363 367 1.600023 CGGCCTAACCAACAAGAACA 58.400 50.000 0.00 0.00 39.03 3.18
364 368 0.879090 CCGGCCTAACCAACAAGAAC 59.121 55.000 0.00 0.00 39.03 3.01
365 369 0.250989 CCCGGCCTAACCAACAAGAA 60.251 55.000 0.00 0.00 39.03 2.52
366 370 1.377229 CCCGGCCTAACCAACAAGA 59.623 57.895 0.00 0.00 39.03 3.02
367 371 1.677633 CCCCGGCCTAACCAACAAG 60.678 63.158 0.00 0.00 39.03 3.16
400 404 3.879180 ATGAACAACCCACCCCCGC 62.879 63.158 0.00 0.00 0.00 6.13
401 405 1.228737 AATGAACAACCCACCCCCG 60.229 57.895 0.00 0.00 0.00 5.73
402 406 1.826340 GCAATGAACAACCCACCCCC 61.826 60.000 0.00 0.00 0.00 5.40
403 407 1.118356 TGCAATGAACAACCCACCCC 61.118 55.000 0.00 0.00 0.00 4.95
404 408 0.318120 CTGCAATGAACAACCCACCC 59.682 55.000 0.00 0.00 0.00 4.61
405 409 0.318120 CCTGCAATGAACAACCCACC 59.682 55.000 0.00 0.00 0.00 4.61
455 705 4.060900 GACATGCTCACACTCTTGAAGAA 58.939 43.478 0.00 0.00 0.00 2.52
457 707 2.411069 CGACATGCTCACACTCTTGAAG 59.589 50.000 0.00 0.00 0.00 3.02
489 739 3.196385 TGGCAAACCCCATCCCCA 61.196 61.111 0.00 0.00 33.59 4.96
506 757 6.992063 AAGATAATCAGAGCAAACGAATGT 57.008 33.333 0.00 0.00 0.00 2.71
517 768 6.590068 AGTGATGGACCAAAGATAATCAGAG 58.410 40.000 0.00 0.00 0.00 3.35
548 799 4.871933 AAGTGTCCATGGGTCAAATTTC 57.128 40.909 13.02 0.24 0.00 2.17
571 822 6.797033 CGCTTTCCACTACTTGTTGATAAAAG 59.203 38.462 0.00 0.00 0.00 2.27
578 829 1.069227 GGCGCTTTCCACTACTTGTTG 60.069 52.381 7.64 0.00 0.00 3.33
580 831 0.396811 AGGCGCTTTCCACTACTTGT 59.603 50.000 7.64 0.00 0.00 3.16
618 869 2.125512 ATGCTCGACAACCCTCGC 60.126 61.111 0.00 0.00 33.47 5.03
626 877 2.760650 ACTATCCTTGTCATGCTCGACA 59.239 45.455 4.87 4.87 44.05 4.35
628 879 2.481969 GCACTATCCTTGTCATGCTCGA 60.482 50.000 0.00 0.00 0.00 4.04
637 890 2.370189 GGATGGCTAGCACTATCCTTGT 59.630 50.000 25.64 0.76 36.88 3.16
640 893 1.203063 TCGGATGGCTAGCACTATCCT 60.203 52.381 27.82 4.85 37.52 3.24
646 899 2.501128 TGCTCGGATGGCTAGCAC 59.499 61.111 18.24 6.66 41.15 4.40
672 925 4.677378 CGTAAGCGATGGACTAATGAGAAG 59.323 45.833 0.00 0.00 41.33 2.85
731 984 4.546674 TGGCTTATCTGAGATGTACTCCA 58.453 43.478 4.96 2.85 44.34 3.86
809 1062 0.608640 AACCTAGTGCGGTCAAGAGG 59.391 55.000 0.00 0.00 35.89 3.69
973 1226 5.670835 GCAACCAAAACAATGACAAACTGTG 60.671 40.000 0.00 0.00 0.00 3.66
1209 1462 4.456911 TGTTCTTCTAATGCCTTCTGCTTG 59.543 41.667 0.00 0.00 42.00 4.01
1780 2033 2.122768 ACCTGGCTCCTTCATTCCTAG 58.877 52.381 0.00 0.00 0.00 3.02
2191 2448 9.865321 AATACCGCATTTATACATAACGTCTAT 57.135 29.630 0.00 0.00 0.00 1.98
2349 2606 9.494271 TTTTATCTCATCTACATATGCCTTCAC 57.506 33.333 1.58 0.00 0.00 3.18
2402 2659 0.179020 CCACTGAAGGAGTTGCACCA 60.179 55.000 0.00 0.00 29.75 4.17
2430 2687 7.830940 TCAACGTGTCAAAAAGTAAGTAGAA 57.169 32.000 0.00 0.00 0.00 2.10
2601 2858 8.973378 GTGACTTAGATTACTGATAACTCATGC 58.027 37.037 0.00 0.00 0.00 4.06
2691 2948 1.743394 GTAATTTCCCACTTGCCTCGG 59.257 52.381 0.00 0.00 0.00 4.63
2725 2982 2.653726 TCACAGACAACAGCACCATTT 58.346 42.857 0.00 0.00 0.00 2.32
2736 2994 5.469760 CCAGTGTTGTATCATTCACAGACAA 59.530 40.000 0.00 0.00 33.84 3.18
2755 3013 5.527582 GGTGCTACAACCTAATAATCCAGTG 59.472 44.000 0.00 0.00 37.24 3.66
2760 3018 6.373186 GTTGGGTGCTACAACCTAATAATC 57.627 41.667 2.90 0.00 42.67 1.75
2790 3050 5.335976 GGATTCTGAAACAAGGGAATGACAC 60.336 44.000 0.00 0.00 0.00 3.67
2843 3104 9.066892 ACTATTTAAGCACAGAAATCAACAGAA 57.933 29.630 0.00 0.00 0.00 3.02
2847 3111 8.296713 TGGAACTATTTAAGCACAGAAATCAAC 58.703 33.333 0.00 0.00 0.00 3.18
2851 3115 8.353423 ACATGGAACTATTTAAGCACAGAAAT 57.647 30.769 0.00 0.00 0.00 2.17
2871 3135 9.927668 ATAAAATGACAGGAAAACTAAACATGG 57.072 29.630 0.00 0.00 0.00 3.66
2913 3177 9.199982 CAACACAATTAGCTCAAAATTCTCAAT 57.800 29.630 0.00 0.00 0.00 2.57
2994 3259 2.694628 TGATTATGGCCCTCAATGCAAC 59.305 45.455 0.00 0.00 0.00 4.17
3190 3455 4.082523 TGCGGGGAGCTACTGCAC 62.083 66.667 17.75 0.00 44.69 4.57
3314 3582 3.457263 TCATACGCTGCGGCAGGA 61.457 61.111 29.44 17.08 38.60 3.86
3395 3669 3.711704 CTGATCCTGGGTTGTACTGGTAT 59.288 47.826 0.00 0.00 0.00 2.73
3620 3903 1.566211 ACATCCTCTACTGCTGCTGT 58.434 50.000 16.37 16.37 0.00 4.40
3640 3923 3.244805 GCCTAACAGGGTAGTTTCACCTT 60.245 47.826 0.00 0.00 38.73 3.50
3643 3926 2.305052 AGGCCTAACAGGGTAGTTTCAC 59.695 50.000 1.29 0.00 35.37 3.18
3690 3973 3.256960 GGGTGGTTCCAGGGAGCA 61.257 66.667 0.00 0.00 38.11 4.26
3716 3999 2.249139 ACAACTCCACCACTCCTCTAC 58.751 52.381 0.00 0.00 0.00 2.59
3842 4135 3.440173 GGCAGCAGTTAAGTAAGATGCAA 59.560 43.478 11.55 0.00 39.34 4.08
3857 4150 1.153409 CAGAGGCTACTGGCAGCAG 60.153 63.158 15.89 13.00 43.67 4.24
3858 4151 1.915266 ACAGAGGCTACTGGCAGCA 60.915 57.895 15.89 0.00 43.67 4.41
3859 4152 1.449246 CACAGAGGCTACTGGCAGC 60.449 63.158 15.89 0.61 44.01 5.25
3877 4170 4.470462 CAACAGCTAATGCAGACAGAAAC 58.530 43.478 0.00 0.00 42.74 2.78
3927 4220 2.808244 AGAAACGCAAACCAACACATG 58.192 42.857 0.00 0.00 0.00 3.21
3928 4221 4.097286 ACTTAGAAACGCAAACCAACACAT 59.903 37.500 0.00 0.00 0.00 3.21
3929 4222 3.440872 ACTTAGAAACGCAAACCAACACA 59.559 39.130 0.00 0.00 0.00 3.72
3930 4223 3.789224 CACTTAGAAACGCAAACCAACAC 59.211 43.478 0.00 0.00 0.00 3.32
3956 4249 3.056962 TGCACATCAAACACACACAAACT 60.057 39.130 0.00 0.00 0.00 2.66
3984 4279 4.215399 CACGCTCTCATCCAAAAAGGTTTA 59.785 41.667 0.00 0.00 39.02 2.01
4019 4314 2.630158 CTCTGTTTGAGCCTCCATCTG 58.370 52.381 0.00 0.00 35.84 2.90
4030 4325 4.949856 AGCTTTTCAACTTCCTCTGTTTGA 59.050 37.500 0.00 0.00 0.00 2.69
4039 4334 3.074412 TCCGATCAGCTTTTCAACTTCC 58.926 45.455 0.00 0.00 0.00 3.46
4054 4349 3.006323 AGGAAGACAGCACATATCCGATC 59.994 47.826 0.00 0.00 32.22 3.69
4055 4350 2.968574 AGGAAGACAGCACATATCCGAT 59.031 45.455 0.00 0.00 32.22 4.18
4062 4357 4.081420 CCTGTTACTAGGAAGACAGCACAT 60.081 45.833 1.67 0.00 40.42 3.21
4118 4413 3.241364 CGTTTGATCGAGAAACTAGCACG 60.241 47.826 16.56 5.78 32.17 5.34
4129 4424 2.517450 GGCGAGCCGTTTGATCGAG 61.517 63.158 3.83 0.00 38.72 4.04
4159 4454 4.383602 AAATGGTCGCACGCACGC 62.384 61.111 0.00 0.00 0.00 5.34
4160 4455 2.202171 GAAATGGTCGCACGCACG 60.202 61.111 0.00 0.00 0.00 5.34
4161 4456 0.109781 AATGAAATGGTCGCACGCAC 60.110 50.000 0.00 0.00 0.00 5.34
4162 4457 0.595588 AAATGAAATGGTCGCACGCA 59.404 45.000 0.00 0.00 0.00 5.24
4163 4458 1.696988 AAAATGAAATGGTCGCACGC 58.303 45.000 0.00 0.00 0.00 5.34
4164 4459 3.119463 GTGAAAAATGAAATGGTCGCACG 59.881 43.478 0.00 0.00 0.00 5.34
4165 4460 3.428534 GGTGAAAAATGAAATGGTCGCAC 59.571 43.478 0.00 0.00 0.00 5.34
4166 4461 3.553922 GGGTGAAAAATGAAATGGTCGCA 60.554 43.478 0.00 0.00 0.00 5.10
4167 4462 2.993220 GGGTGAAAAATGAAATGGTCGC 59.007 45.455 0.00 0.00 0.00 5.19
4168 4463 3.584834 GGGGTGAAAAATGAAATGGTCG 58.415 45.455 0.00 0.00 0.00 4.79
4169 4464 3.326297 TGGGGGTGAAAAATGAAATGGTC 59.674 43.478 0.00 0.00 0.00 4.02
4170 4465 3.321950 TGGGGGTGAAAAATGAAATGGT 58.678 40.909 0.00 0.00 0.00 3.55
4171 4466 4.363991 TTGGGGGTGAAAAATGAAATGG 57.636 40.909 0.00 0.00 0.00 3.16
4172 4467 5.558818 TCATTGGGGGTGAAAAATGAAATG 58.441 37.500 0.00 0.00 36.40 2.32
4173 4468 5.547276 TCTCATTGGGGGTGAAAAATGAAAT 59.453 36.000 0.00 0.00 38.27 2.17
4174 4469 4.904251 TCTCATTGGGGGTGAAAAATGAAA 59.096 37.500 0.00 0.00 38.27 2.69
4175 4470 4.487804 TCTCATTGGGGGTGAAAAATGAA 58.512 39.130 0.00 0.00 38.27 2.57
4176 4471 4.125124 TCTCATTGGGGGTGAAAAATGA 57.875 40.909 0.00 0.00 36.85 2.57
4177 4472 4.284234 ACTTCTCATTGGGGGTGAAAAATG 59.716 41.667 0.00 0.00 0.00 2.32
4178 4473 4.284234 CACTTCTCATTGGGGGTGAAAAAT 59.716 41.667 5.13 0.00 0.00 1.82
4179 4474 3.640967 CACTTCTCATTGGGGGTGAAAAA 59.359 43.478 5.13 0.00 0.00 1.94
4180 4475 3.117322 TCACTTCTCATTGGGGGTGAAAA 60.117 43.478 9.62 0.00 31.99 2.29
4181 4476 2.445145 TCACTTCTCATTGGGGGTGAAA 59.555 45.455 9.62 0.00 31.99 2.69
4182 4477 2.040278 CTCACTTCTCATTGGGGGTGAA 59.960 50.000 12.02 0.00 34.11 3.18
4183 4478 1.630369 CTCACTTCTCATTGGGGGTGA 59.370 52.381 10.96 10.96 33.56 4.02
4184 4479 1.630369 TCTCACTTCTCATTGGGGGTG 59.370 52.381 4.82 4.82 0.00 4.61
4185 4480 2.044793 TCTCACTTCTCATTGGGGGT 57.955 50.000 0.00 0.00 0.00 4.95
4186 4481 3.054139 TGATTCTCACTTCTCATTGGGGG 60.054 47.826 0.00 0.00 0.00 5.40
4187 4482 4.226427 TGATTCTCACTTCTCATTGGGG 57.774 45.455 0.00 0.00 0.00 4.96
4188 4483 4.820716 GGATGATTCTCACTTCTCATTGGG 59.179 45.833 0.00 0.00 0.00 4.12
4189 4484 4.820716 GGGATGATTCTCACTTCTCATTGG 59.179 45.833 0.00 0.00 0.00 3.16
4190 4485 5.682659 AGGGATGATTCTCACTTCTCATTG 58.317 41.667 0.00 0.00 0.00 2.82
4191 4486 5.666718 AGAGGGATGATTCTCACTTCTCATT 59.333 40.000 0.00 0.00 32.76 2.57
4192 4487 5.218179 AGAGGGATGATTCTCACTTCTCAT 58.782 41.667 0.00 0.00 32.76 2.90
4193 4488 4.618635 AGAGGGATGATTCTCACTTCTCA 58.381 43.478 0.00 0.00 32.76 3.27
4194 4489 5.600696 GAAGAGGGATGATTCTCACTTCTC 58.399 45.833 5.98 0.00 43.09 2.87
4195 4490 5.612725 GAAGAGGGATGATTCTCACTTCT 57.387 43.478 5.98 0.00 43.09 2.85
4196 4491 5.612725 AGAAGAGGGATGATTCTCACTTC 57.387 43.478 5.28 5.28 45.33 3.01
4197 4492 5.250313 ACAAGAAGAGGGATGATTCTCACTT 59.750 40.000 0.00 0.00 36.15 3.16
4198 4493 4.782156 ACAAGAAGAGGGATGATTCTCACT 59.218 41.667 0.00 0.00 32.21 3.41
4199 4494 5.096443 ACAAGAAGAGGGATGATTCTCAC 57.904 43.478 0.00 0.00 32.21 3.51
4200 4495 5.768980 AACAAGAAGAGGGATGATTCTCA 57.231 39.130 0.00 0.00 32.21 3.27
4201 4496 7.066404 GGTTAAACAAGAAGAGGGATGATTCTC 59.934 40.741 0.00 0.00 32.21 2.87
4202 4497 6.887002 GGTTAAACAAGAAGAGGGATGATTCT 59.113 38.462 0.00 0.00 34.81 2.40
4203 4498 6.095580 GGGTTAAACAAGAAGAGGGATGATTC 59.904 42.308 0.00 0.00 0.00 2.52
4204 4499 5.952347 GGGTTAAACAAGAAGAGGGATGATT 59.048 40.000 0.00 0.00 0.00 2.57
4205 4500 5.510430 GGGTTAAACAAGAAGAGGGATGAT 58.490 41.667 0.00 0.00 0.00 2.45
4206 4501 4.564821 CGGGTTAAACAAGAAGAGGGATGA 60.565 45.833 0.00 0.00 0.00 2.92
4207 4502 3.689649 CGGGTTAAACAAGAAGAGGGATG 59.310 47.826 0.00 0.00 0.00 3.51
4208 4503 3.308188 CCGGGTTAAACAAGAAGAGGGAT 60.308 47.826 0.00 0.00 0.00 3.85
4209 4504 2.039348 CCGGGTTAAACAAGAAGAGGGA 59.961 50.000 0.00 0.00 0.00 4.20
4210 4505 2.039348 TCCGGGTTAAACAAGAAGAGGG 59.961 50.000 0.00 0.00 0.00 4.30
4211 4506 3.335579 CTCCGGGTTAAACAAGAAGAGG 58.664 50.000 0.00 0.00 0.00 3.69
4212 4507 2.742589 GCTCCGGGTTAAACAAGAAGAG 59.257 50.000 0.00 0.00 0.00 2.85
4213 4508 2.551504 GGCTCCGGGTTAAACAAGAAGA 60.552 50.000 0.00 0.00 0.00 2.87
4214 4509 1.810755 GGCTCCGGGTTAAACAAGAAG 59.189 52.381 0.00 0.00 0.00 2.85
4215 4510 1.878948 CGGCTCCGGGTTAAACAAGAA 60.879 52.381 0.00 0.00 35.56 2.52
4216 4511 0.320946 CGGCTCCGGGTTAAACAAGA 60.321 55.000 0.00 0.00 35.56 3.02
4217 4512 1.918868 GCGGCTCCGGGTTAAACAAG 61.919 60.000 10.57 0.00 40.19 3.16
4218 4513 1.967494 GCGGCTCCGGGTTAAACAA 60.967 57.895 10.57 0.00 40.19 2.83
4219 4514 2.358984 GCGGCTCCGGGTTAAACA 60.359 61.111 10.57 0.00 40.19 2.83
4220 4515 3.129502 GGCGGCTCCGGGTTAAAC 61.130 66.667 10.57 0.00 40.19 2.01
4221 4516 4.413565 GGGCGGCTCCGGGTTAAA 62.414 66.667 9.56 0.00 40.19 1.52
4233 4528 4.722700 CAAGGAGTGTGGGGGCGG 62.723 72.222 0.00 0.00 0.00 6.13
4236 4531 3.260100 AGGCAAGGAGTGTGGGGG 61.260 66.667 0.00 0.00 0.00 5.40
4237 4532 2.034687 CAGGCAAGGAGTGTGGGG 59.965 66.667 0.00 0.00 0.00 4.96
4238 4533 2.034687 CCAGGCAAGGAGTGTGGG 59.965 66.667 0.00 0.00 0.00 4.61
4239 4534 3.160585 TCCAGGCAAGGAGTGTGG 58.839 61.111 0.00 0.00 32.77 4.17
4251 4546 2.786495 ATCGGCTACGTGCTCCAGG 61.786 63.158 0.00 0.00 42.39 4.45
4252 4547 1.589993 CATCGGCTACGTGCTCCAG 60.590 63.158 0.00 0.00 42.39 3.86
4253 4548 2.348104 ACATCGGCTACGTGCTCCA 61.348 57.895 0.00 0.00 42.39 3.86
4254 4549 1.878522 CACATCGGCTACGTGCTCC 60.879 63.158 0.00 0.00 42.39 4.70
4255 4550 1.878522 CCACATCGGCTACGTGCTC 60.879 63.158 0.00 0.00 42.39 4.26
4256 4551 2.184322 CCACATCGGCTACGTGCT 59.816 61.111 0.00 0.00 42.39 4.40
4257 4552 2.125673 ACCACATCGGCTACGTGC 60.126 61.111 0.00 0.00 41.85 5.34
4258 4553 0.525668 GAGACCACATCGGCTACGTG 60.526 60.000 0.00 0.00 41.85 4.49
4259 4554 1.807886 GAGACCACATCGGCTACGT 59.192 57.895 0.00 0.00 41.85 3.57
4260 4555 1.298413 CGAGACCACATCGGCTACG 60.298 63.158 0.00 0.00 39.03 3.51
4261 4556 4.711980 CGAGACCACATCGGCTAC 57.288 61.111 0.00 0.00 39.03 3.58
4266 4561 2.629050 ATTCGGCCGAGACCACATCG 62.629 60.000 29.20 0.00 39.86 3.84
4267 4562 0.876342 GATTCGGCCGAGACCACATC 60.876 60.000 29.20 22.24 0.00 3.06
4268 4563 1.144057 GATTCGGCCGAGACCACAT 59.856 57.895 29.20 17.99 0.00 3.21
4269 4564 2.225791 CTGATTCGGCCGAGACCACA 62.226 60.000 29.20 21.14 0.00 4.17
4270 4565 1.519455 CTGATTCGGCCGAGACCAC 60.519 63.158 29.20 17.96 0.00 4.16
4271 4566 1.254975 TTCTGATTCGGCCGAGACCA 61.255 55.000 29.20 23.62 0.00 4.02
4272 4567 0.528684 CTTCTGATTCGGCCGAGACC 60.529 60.000 29.20 20.43 0.00 3.85
4273 4568 1.148759 GCTTCTGATTCGGCCGAGAC 61.149 60.000 29.20 24.49 0.00 3.36
4274 4569 1.141881 GCTTCTGATTCGGCCGAGA 59.858 57.895 29.20 19.32 0.00 4.04
4275 4570 2.233654 CGCTTCTGATTCGGCCGAG 61.234 63.158 29.20 17.08 0.00 4.63
4276 4571 2.202743 CGCTTCTGATTCGGCCGA 60.203 61.111 27.28 27.28 0.00 5.54
4277 4572 2.509336 ACGCTTCTGATTCGGCCG 60.509 61.111 22.12 22.12 0.00 6.13
4278 4573 2.517450 CGACGCTTCTGATTCGGCC 61.517 63.158 0.00 0.00 0.00 6.13
4279 4574 2.998667 CGACGCTTCTGATTCGGC 59.001 61.111 4.55 0.54 0.00 5.54
4280 4575 2.849966 CGCGACGCTTCTGATTCGG 61.850 63.158 19.02 0.00 32.04 4.30
4281 4576 2.056087 GACGCGACGCTTCTGATTCG 62.056 60.000 15.93 0.91 34.56 3.34
4282 4577 1.071019 TGACGCGACGCTTCTGATTC 61.071 55.000 24.26 7.54 0.00 2.52
4283 4578 0.666274 TTGACGCGACGCTTCTGATT 60.666 50.000 24.26 0.00 0.00 2.57
4284 4579 1.073216 CTTGACGCGACGCTTCTGAT 61.073 55.000 24.26 1.05 0.00 2.90
4285 4580 1.729484 CTTGACGCGACGCTTCTGA 60.729 57.895 24.26 13.47 0.00 3.27
4286 4581 2.720758 CCTTGACGCGACGCTTCTG 61.721 63.158 24.26 16.98 0.00 3.02
4287 4582 2.430921 CCTTGACGCGACGCTTCT 60.431 61.111 24.26 4.65 0.00 2.85
4288 4583 2.717809 GACCTTGACGCGACGCTTC 61.718 63.158 15.93 18.46 0.00 3.86
4289 4584 1.859427 TAGACCTTGACGCGACGCTT 61.859 55.000 15.93 8.77 0.00 4.68
4290 4585 1.859427 TTAGACCTTGACGCGACGCT 61.859 55.000 15.93 4.79 0.00 5.07
4291 4586 0.801067 ATTAGACCTTGACGCGACGC 60.801 55.000 15.93 10.49 0.00 5.19
4292 4587 0.914551 CATTAGACCTTGACGCGACG 59.085 55.000 15.93 0.00 0.00 5.12
4293 4588 0.645868 GCATTAGACCTTGACGCGAC 59.354 55.000 15.93 7.62 0.00 5.19
4294 4589 0.530744 AGCATTAGACCTTGACGCGA 59.469 50.000 15.93 0.00 0.00 5.87
4295 4590 0.924090 GAGCATTAGACCTTGACGCG 59.076 55.000 3.53 3.53 0.00 6.01
4296 4591 2.010145 TGAGCATTAGACCTTGACGC 57.990 50.000 0.00 0.00 0.00 5.19
4297 4592 4.183865 TGAATGAGCATTAGACCTTGACG 58.816 43.478 0.00 0.00 0.00 4.35
4298 4593 5.423015 TCTGAATGAGCATTAGACCTTGAC 58.577 41.667 0.00 0.00 0.00 3.18
4299 4594 5.668471 CTCTGAATGAGCATTAGACCTTGA 58.332 41.667 0.00 0.00 35.84 3.02
4300 4595 5.987777 CTCTGAATGAGCATTAGACCTTG 57.012 43.478 0.00 0.00 35.84 3.61
4312 4607 1.004044 ACACCCAAGGCTCTGAATGAG 59.996 52.381 0.00 0.00 45.33 2.90
4313 4608 1.067295 ACACCCAAGGCTCTGAATGA 58.933 50.000 0.00 0.00 0.00 2.57
4314 4609 1.171308 CACACCCAAGGCTCTGAATG 58.829 55.000 0.00 0.00 0.00 2.67
4315 4610 0.610232 GCACACCCAAGGCTCTGAAT 60.610 55.000 0.00 0.00 0.00 2.57
4316 4611 1.228245 GCACACCCAAGGCTCTGAA 60.228 57.895 0.00 0.00 0.00 3.02
4317 4612 2.431683 GCACACCCAAGGCTCTGA 59.568 61.111 0.00 0.00 0.00 3.27
4318 4613 2.674380 GGCACACCCAAGGCTCTG 60.674 66.667 0.00 0.00 0.00 3.35
4319 4614 3.177884 TGGCACACCCAAGGCTCT 61.178 61.111 0.00 0.00 41.82 4.09
4326 4621 0.955178 CAATTACGTTGGCACACCCA 59.045 50.000 0.00 0.00 43.51 4.51
4327 4622 0.955905 ACAATTACGTTGGCACACCC 59.044 50.000 0.00 0.00 42.28 4.61
4328 4623 2.325509 GACAATTACGTTGGCACACC 57.674 50.000 0.00 0.00 45.67 4.16
4333 4628 3.003897 TCAGTTTGGACAATTACGTTGGC 59.996 43.478 0.00 0.00 45.64 4.52
4334 4629 4.822036 TCAGTTTGGACAATTACGTTGG 57.178 40.909 0.00 0.00 42.28 3.77
4335 4630 8.020819 ACATTATCAGTTTGGACAATTACGTTG 58.979 33.333 0.00 0.00 43.64 4.10
4336 4631 8.106247 ACATTATCAGTTTGGACAATTACGTT 57.894 30.769 0.00 0.00 0.00 3.99
4337 4632 7.681939 ACATTATCAGTTTGGACAATTACGT 57.318 32.000 0.00 0.00 0.00 3.57
4338 4633 9.485591 GTTACATTATCAGTTTGGACAATTACG 57.514 33.333 0.00 0.00 0.00 3.18
4339 4634 9.783256 GGTTACATTATCAGTTTGGACAATTAC 57.217 33.333 0.00 0.00 0.00 1.89
4340 4635 8.670135 CGGTTACATTATCAGTTTGGACAATTA 58.330 33.333 0.00 0.00 0.00 1.40
4341 4636 7.175990 ACGGTTACATTATCAGTTTGGACAATT 59.824 33.333 0.00 0.00 0.00 2.32
4342 4637 6.657541 ACGGTTACATTATCAGTTTGGACAAT 59.342 34.615 0.00 0.00 0.00 2.71
4343 4638 5.998981 ACGGTTACATTATCAGTTTGGACAA 59.001 36.000 0.00 0.00 0.00 3.18
4344 4639 5.410132 CACGGTTACATTATCAGTTTGGACA 59.590 40.000 0.00 0.00 0.00 4.02
4345 4640 5.163794 CCACGGTTACATTATCAGTTTGGAC 60.164 44.000 0.00 0.00 0.00 4.02
4346 4641 4.938832 CCACGGTTACATTATCAGTTTGGA 59.061 41.667 0.00 0.00 0.00 3.53
4347 4642 4.698304 ACCACGGTTACATTATCAGTTTGG 59.302 41.667 0.00 0.00 0.00 3.28
4348 4643 5.873179 ACCACGGTTACATTATCAGTTTG 57.127 39.130 0.00 0.00 0.00 2.93
4349 4644 6.938507 TCTACCACGGTTACATTATCAGTTT 58.061 36.000 0.00 0.00 0.00 2.66
4350 4645 6.406624 CCTCTACCACGGTTACATTATCAGTT 60.407 42.308 0.00 0.00 0.00 3.16
4351 4646 5.068723 CCTCTACCACGGTTACATTATCAGT 59.931 44.000 0.00 0.00 0.00 3.41
4352 4647 5.529791 CCTCTACCACGGTTACATTATCAG 58.470 45.833 0.00 0.00 0.00 2.90
4353 4648 4.202182 GCCTCTACCACGGTTACATTATCA 60.202 45.833 0.00 0.00 0.00 2.15
4354 4649 4.304939 GCCTCTACCACGGTTACATTATC 58.695 47.826 0.00 0.00 0.00 1.75
4355 4650 3.243636 CGCCTCTACCACGGTTACATTAT 60.244 47.826 0.00 0.00 0.00 1.28
4356 4651 2.099592 CGCCTCTACCACGGTTACATTA 59.900 50.000 0.00 0.00 0.00 1.90
4357 4652 1.134907 CGCCTCTACCACGGTTACATT 60.135 52.381 0.00 0.00 0.00 2.71
4358 4653 0.458669 CGCCTCTACCACGGTTACAT 59.541 55.000 0.00 0.00 0.00 2.29
4359 4654 0.895100 ACGCCTCTACCACGGTTACA 60.895 55.000 0.00 0.00 0.00 2.41
4360 4655 0.244721 AACGCCTCTACCACGGTTAC 59.755 55.000 0.00 0.00 0.00 2.50
4361 4656 0.244450 CAACGCCTCTACCACGGTTA 59.756 55.000 0.00 0.00 0.00 2.85
4362 4657 1.005394 CAACGCCTCTACCACGGTT 60.005 57.895 0.00 0.00 0.00 4.44
4363 4658 1.466025 TTCAACGCCTCTACCACGGT 61.466 55.000 0.00 0.00 0.00 4.83
4364 4659 0.108329 ATTCAACGCCTCTACCACGG 60.108 55.000 0.00 0.00 0.00 4.94
4365 4660 1.722011 AATTCAACGCCTCTACCACG 58.278 50.000 0.00 0.00 0.00 4.94
4366 4661 3.071479 TCAAATTCAACGCCTCTACCAC 58.929 45.455 0.00 0.00 0.00 4.16
4367 4662 3.410631 TCAAATTCAACGCCTCTACCA 57.589 42.857 0.00 0.00 0.00 3.25
4368 4663 3.424433 CGTTCAAATTCAACGCCTCTACC 60.424 47.826 9.06 0.00 40.14 3.18
4369 4664 3.430895 TCGTTCAAATTCAACGCCTCTAC 59.569 43.478 14.74 0.00 45.05 2.59
4370 4665 3.655486 TCGTTCAAATTCAACGCCTCTA 58.345 40.909 14.74 0.00 45.05 2.43
4371 4666 2.480419 CTCGTTCAAATTCAACGCCTCT 59.520 45.455 14.74 0.00 45.05 3.69
4372 4667 2.412847 CCTCGTTCAAATTCAACGCCTC 60.413 50.000 14.74 0.00 45.05 4.70
4373 4668 1.535462 CCTCGTTCAAATTCAACGCCT 59.465 47.619 14.74 0.00 45.05 5.52
4374 4669 1.401018 CCCTCGTTCAAATTCAACGCC 60.401 52.381 14.74 0.00 45.05 5.68
4375 4670 1.265905 ACCCTCGTTCAAATTCAACGC 59.734 47.619 14.74 0.00 45.05 4.84
4376 4671 3.619233 AACCCTCGTTCAAATTCAACG 57.381 42.857 13.79 13.79 46.46 4.10
4377 4672 5.237779 TGAGTAACCCTCGTTCAAATTCAAC 59.762 40.000 0.00 0.00 43.64 3.18
4378 4673 5.369833 TGAGTAACCCTCGTTCAAATTCAA 58.630 37.500 0.00 0.00 43.64 2.69
4379 4674 4.963373 TGAGTAACCCTCGTTCAAATTCA 58.037 39.130 0.00 0.00 43.64 2.57
4380 4675 5.934935 TTGAGTAACCCTCGTTCAAATTC 57.065 39.130 0.00 0.00 43.64 2.17
4381 4676 6.001460 TCATTGAGTAACCCTCGTTCAAATT 58.999 36.000 0.00 0.00 43.64 1.82
4382 4677 5.556915 TCATTGAGTAACCCTCGTTCAAAT 58.443 37.500 0.00 0.00 43.64 2.32
4383 4678 4.963373 TCATTGAGTAACCCTCGTTCAAA 58.037 39.130 0.00 0.00 43.64 2.69
4384 4679 4.610605 TCATTGAGTAACCCTCGTTCAA 57.389 40.909 0.00 0.00 43.64 2.69
4385 4680 4.819105 ATCATTGAGTAACCCTCGTTCA 57.181 40.909 0.00 0.00 43.64 3.18
4386 4681 4.201822 GCAATCATTGAGTAACCCTCGTTC 60.202 45.833 0.00 0.00 43.64 3.95
4387 4682 3.689649 GCAATCATTGAGTAACCCTCGTT 59.310 43.478 0.00 0.00 43.64 3.85
4388 4683 3.270877 GCAATCATTGAGTAACCCTCGT 58.729 45.455 0.00 0.00 43.64 4.18
4389 4684 3.270027 TGCAATCATTGAGTAACCCTCG 58.730 45.455 0.00 0.00 43.64 4.63
4390 4685 3.065925 GCTGCAATCATTGAGTAACCCTC 59.934 47.826 0.00 0.00 40.89 4.30
4391 4686 3.019564 GCTGCAATCATTGAGTAACCCT 58.980 45.455 0.00 0.00 0.00 4.34
4392 4687 2.754552 TGCTGCAATCATTGAGTAACCC 59.245 45.455 0.00 0.00 0.00 4.11
4393 4688 3.428045 GGTGCTGCAATCATTGAGTAACC 60.428 47.826 2.77 0.00 0.00 2.85
4394 4689 3.191162 TGGTGCTGCAATCATTGAGTAAC 59.809 43.478 2.77 0.00 0.00 2.50
4395 4690 3.419943 TGGTGCTGCAATCATTGAGTAA 58.580 40.909 2.77 0.00 0.00 2.24
4396 4691 3.070476 TGGTGCTGCAATCATTGAGTA 57.930 42.857 2.77 0.00 0.00 2.59
4397 4692 1.913778 TGGTGCTGCAATCATTGAGT 58.086 45.000 2.77 0.00 0.00 3.41
4398 4693 3.520290 ATTGGTGCTGCAATCATTGAG 57.480 42.857 2.77 0.00 0.00 3.02
4399 4694 4.018490 AGTATTGGTGCTGCAATCATTGA 58.982 39.130 2.77 0.00 0.00 2.57
4400 4695 4.380841 AGTATTGGTGCTGCAATCATTG 57.619 40.909 2.77 0.00 0.00 2.82
4401 4696 6.528537 TTAAGTATTGGTGCTGCAATCATT 57.471 33.333 2.77 5.50 0.00 2.57
4402 4697 6.321945 TCATTAAGTATTGGTGCTGCAATCAT 59.678 34.615 2.77 0.00 0.00 2.45
4403 4698 5.651576 TCATTAAGTATTGGTGCTGCAATCA 59.348 36.000 2.77 3.09 0.00 2.57
4404 4699 6.135290 TCATTAAGTATTGGTGCTGCAATC 57.865 37.500 2.77 0.00 0.00 2.67
4405 4700 6.528537 TTCATTAAGTATTGGTGCTGCAAT 57.471 33.333 2.77 0.00 0.00 3.56
4406 4701 5.973899 TTCATTAAGTATTGGTGCTGCAA 57.026 34.783 2.77 0.00 0.00 4.08
4407 4702 5.418524 ACATTCATTAAGTATTGGTGCTGCA 59.581 36.000 0.00 0.00 0.00 4.41
4408 4703 5.894807 ACATTCATTAAGTATTGGTGCTGC 58.105 37.500 0.00 0.00 0.00 5.25
4409 4704 6.037062 TCGACATTCATTAAGTATTGGTGCTG 59.963 38.462 0.00 0.00 0.00 4.41
4410 4705 6.112734 TCGACATTCATTAAGTATTGGTGCT 58.887 36.000 0.00 0.00 0.00 4.40
4411 4706 6.358118 TCGACATTCATTAAGTATTGGTGC 57.642 37.500 0.00 0.00 0.00 5.01
4412 4707 7.974675 ACTTCGACATTCATTAAGTATTGGTG 58.025 34.615 0.00 0.00 0.00 4.17
4413 4708 8.041323 AGACTTCGACATTCATTAAGTATTGGT 58.959 33.333 0.00 0.00 30.83 3.67
4414 4709 8.425577 AGACTTCGACATTCATTAAGTATTGG 57.574 34.615 0.00 0.00 30.83 3.16
4419 4714 9.141400 GAAAGTAGACTTCGACATTCATTAAGT 57.859 33.333 0.00 0.00 34.61 2.24
4420 4715 9.140286 TGAAAGTAGACTTCGACATTCATTAAG 57.860 33.333 6.18 0.00 35.44 1.85
4421 4716 9.483916 TTGAAAGTAGACTTCGACATTCATTAA 57.516 29.630 9.84 0.00 38.35 1.40
4422 4717 9.483916 TTTGAAAGTAGACTTCGACATTCATTA 57.516 29.630 9.84 1.91 38.35 1.90
4423 4718 7.962964 TTGAAAGTAGACTTCGACATTCATT 57.037 32.000 9.84 0.00 38.35 2.57
4424 4719 7.962964 TTTGAAAGTAGACTTCGACATTCAT 57.037 32.000 9.84 0.00 38.35 2.57
4425 4720 7.962964 ATTTGAAAGTAGACTTCGACATTCA 57.037 32.000 6.18 6.18 37.39 2.57
4426 4721 9.319223 GAAATTTGAAAGTAGACTTCGACATTC 57.681 33.333 0.00 1.83 34.61 2.67
4427 4722 8.009974 CGAAATTTGAAAGTAGACTTCGACATT 58.990 33.333 0.00 0.00 37.25 2.71
4428 4723 7.360101 CCGAAATTTGAAAGTAGACTTCGACAT 60.360 37.037 0.00 0.00 37.25 3.06
4429 4724 6.073980 CCGAAATTTGAAAGTAGACTTCGACA 60.074 38.462 0.00 0.00 37.25 4.35
4430 4725 6.145048 TCCGAAATTTGAAAGTAGACTTCGAC 59.855 38.462 0.00 0.00 37.25 4.20
4431 4726 6.218019 TCCGAAATTTGAAAGTAGACTTCGA 58.782 36.000 0.00 0.00 37.25 3.71
4432 4727 6.462073 TCCGAAATTTGAAAGTAGACTTCG 57.538 37.500 0.00 0.00 34.61 3.79
4433 4728 7.803659 CCTTTCCGAAATTTGAAAGTAGACTTC 59.196 37.037 20.83 0.00 43.72 3.01
4434 4729 7.284716 ACCTTTCCGAAATTTGAAAGTAGACTT 59.715 33.333 20.83 0.00 43.72 3.01
4435 4730 6.771267 ACCTTTCCGAAATTTGAAAGTAGACT 59.229 34.615 20.83 4.66 43.72 3.24
4436 4731 6.967135 ACCTTTCCGAAATTTGAAAGTAGAC 58.033 36.000 20.83 0.00 43.72 2.59
4437 4732 7.935210 AGTACCTTTCCGAAATTTGAAAGTAGA 59.065 33.333 20.83 9.56 43.72 2.59
4438 4733 8.095937 AGTACCTTTCCGAAATTTGAAAGTAG 57.904 34.615 20.83 13.43 43.72 2.57
4439 4734 8.347035 CAAGTACCTTTCCGAAATTTGAAAGTA 58.653 33.333 20.83 14.02 43.72 2.24
4440 4735 6.954487 AGTACCTTTCCGAAATTTGAAAGT 57.046 33.333 20.83 14.66 43.72 2.66
4441 4736 7.200455 ACAAGTACCTTTCCGAAATTTGAAAG 58.800 34.615 17.83 17.83 44.45 2.62
4442 4737 7.102847 ACAAGTACCTTTCCGAAATTTGAAA 57.897 32.000 0.00 0.00 0.00 2.69
4443 4738 6.702716 ACAAGTACCTTTCCGAAATTTGAA 57.297 33.333 0.00 0.00 0.00 2.69
4444 4739 6.319152 TCAACAAGTACCTTTCCGAAATTTGA 59.681 34.615 0.00 0.00 0.00 2.69
4445 4740 6.500041 TCAACAAGTACCTTTCCGAAATTTG 58.500 36.000 0.00 0.00 0.00 2.32
4446 4741 6.702716 TCAACAAGTACCTTTCCGAAATTT 57.297 33.333 0.00 0.00 0.00 1.82
4447 4742 6.095720 TGTTCAACAAGTACCTTTCCGAAATT 59.904 34.615 0.00 0.00 0.00 1.82
4448 4743 5.591067 TGTTCAACAAGTACCTTTCCGAAAT 59.409 36.000 0.00 0.00 0.00 2.17
4449 4744 4.942483 TGTTCAACAAGTACCTTTCCGAAA 59.058 37.500 0.00 0.00 0.00 3.46
4450 4745 4.515361 TGTTCAACAAGTACCTTTCCGAA 58.485 39.130 0.00 0.00 0.00 4.30
4451 4746 4.139859 TGTTCAACAAGTACCTTTCCGA 57.860 40.909 0.00 0.00 0.00 4.55
4452 4747 5.212194 CAATGTTCAACAAGTACCTTTCCG 58.788 41.667 0.00 0.00 0.00 4.30
4453 4748 6.144078 ACAATGTTCAACAAGTACCTTTCC 57.856 37.500 0.00 0.00 0.00 3.13
4454 4749 8.185505 TGTTACAATGTTCAACAAGTACCTTTC 58.814 33.333 0.00 0.00 0.00 2.62
4455 4750 8.057536 TGTTACAATGTTCAACAAGTACCTTT 57.942 30.769 0.00 0.00 0.00 3.11
4456 4751 7.201785 CCTGTTACAATGTTCAACAAGTACCTT 60.202 37.037 0.00 0.00 32.16 3.50
4457 4752 6.262273 CCTGTTACAATGTTCAACAAGTACCT 59.738 38.462 0.00 0.00 32.16 3.08
4458 4753 6.038936 ACCTGTTACAATGTTCAACAAGTACC 59.961 38.462 0.00 0.00 32.16 3.34
4459 4754 7.023197 ACCTGTTACAATGTTCAACAAGTAC 57.977 36.000 0.00 0.00 32.16 2.73
4460 4755 7.988599 ACTACCTGTTACAATGTTCAACAAGTA 59.011 33.333 0.00 9.05 31.27 2.24
4461 4756 6.826741 ACTACCTGTTACAATGTTCAACAAGT 59.173 34.615 7.98 7.98 32.93 3.16
4462 4757 7.011950 TGACTACCTGTTACAATGTTCAACAAG 59.988 37.037 0.00 0.81 32.16 3.16
4463 4758 6.824196 TGACTACCTGTTACAATGTTCAACAA 59.176 34.615 0.00 0.00 32.16 2.83
4464 4759 6.350103 TGACTACCTGTTACAATGTTCAACA 58.650 36.000 0.00 0.00 0.00 3.33
4465 4760 6.854496 TGACTACCTGTTACAATGTTCAAC 57.146 37.500 0.00 0.00 0.00 3.18
4466 4761 7.337184 TGTTTGACTACCTGTTACAATGTTCAA 59.663 33.333 0.00 0.00 0.00 2.69
4467 4762 6.824196 TGTTTGACTACCTGTTACAATGTTCA 59.176 34.615 0.00 0.00 0.00 3.18
4468 4763 7.254227 TGTTTGACTACCTGTTACAATGTTC 57.746 36.000 0.00 0.00 0.00 3.18
4469 4764 7.255451 CCATGTTTGACTACCTGTTACAATGTT 60.255 37.037 0.00 0.00 0.00 2.71
4470 4765 6.206634 CCATGTTTGACTACCTGTTACAATGT 59.793 38.462 0.00 0.00 0.00 2.71
4471 4766 6.206634 ACCATGTTTGACTACCTGTTACAATG 59.793 38.462 0.00 0.00 0.00 2.82
4472 4767 6.303839 ACCATGTTTGACTACCTGTTACAAT 58.696 36.000 0.00 0.00 0.00 2.71
4473 4768 5.686753 ACCATGTTTGACTACCTGTTACAA 58.313 37.500 0.00 0.00 0.00 2.41
4474 4769 5.298989 ACCATGTTTGACTACCTGTTACA 57.701 39.130 0.00 0.00 0.00 2.41
4475 4770 5.562113 GCAACCATGTTTGACTACCTGTTAC 60.562 44.000 7.23 0.00 0.00 2.50
4476 4771 4.517453 GCAACCATGTTTGACTACCTGTTA 59.483 41.667 7.23 0.00 0.00 2.41
4477 4772 3.317993 GCAACCATGTTTGACTACCTGTT 59.682 43.478 7.23 0.00 0.00 3.16
4478 4773 2.884639 GCAACCATGTTTGACTACCTGT 59.115 45.455 7.23 0.00 0.00 4.00
4479 4774 3.149196 AGCAACCATGTTTGACTACCTG 58.851 45.455 7.23 0.00 0.00 4.00
4480 4775 3.181445 TGAGCAACCATGTTTGACTACCT 60.181 43.478 7.23 0.00 0.00 3.08
4481 4776 3.146066 TGAGCAACCATGTTTGACTACC 58.854 45.455 7.23 0.00 0.00 3.18
4482 4777 4.455533 TCATGAGCAACCATGTTTGACTAC 59.544 41.667 7.23 0.00 43.22 2.73
4483 4778 4.650734 TCATGAGCAACCATGTTTGACTA 58.349 39.130 7.23 0.00 43.22 2.59
4484 4779 3.489355 TCATGAGCAACCATGTTTGACT 58.511 40.909 7.23 3.56 43.22 3.41
4485 4780 3.829948 CTCATGAGCAACCATGTTTGAC 58.170 45.455 10.38 0.84 43.22 3.18
4499 4794 3.320541 CCCAGACCTAACTAGCTCATGAG 59.679 52.174 18.84 18.84 0.00 2.90
4500 4795 3.052869 TCCCAGACCTAACTAGCTCATGA 60.053 47.826 0.00 0.00 0.00 3.07
4501 4796 3.300388 TCCCAGACCTAACTAGCTCATG 58.700 50.000 0.00 0.00 0.00 3.07
4502 4797 3.571590 CTCCCAGACCTAACTAGCTCAT 58.428 50.000 0.00 0.00 0.00 2.90
4503 4798 2.358300 CCTCCCAGACCTAACTAGCTCA 60.358 54.545 0.00 0.00 0.00 4.26
4504 4799 2.091775 TCCTCCCAGACCTAACTAGCTC 60.092 54.545 0.00 0.00 0.00 4.09
4505 4800 1.930914 TCCTCCCAGACCTAACTAGCT 59.069 52.381 0.00 0.00 0.00 3.32
4506 4801 2.312390 CTCCTCCCAGACCTAACTAGC 58.688 57.143 0.00 0.00 0.00 3.42
4507 4802 3.673543 ACTCCTCCCAGACCTAACTAG 57.326 52.381 0.00 0.00 0.00 2.57
4508 4803 5.399958 GGATTACTCCTCCCAGACCTAACTA 60.400 48.000 0.00 0.00 38.65 2.24
4509 4804 4.548669 GATTACTCCTCCCAGACCTAACT 58.451 47.826 0.00 0.00 0.00 2.24
4510 4805 3.642377 GGATTACTCCTCCCAGACCTAAC 59.358 52.174 0.00 0.00 38.65 2.34
4511 4806 3.273886 TGGATTACTCCTCCCAGACCTAA 59.726 47.826 0.29 0.00 42.59 2.69
4512 4807 2.863238 TGGATTACTCCTCCCAGACCTA 59.137 50.000 0.29 0.00 42.59 3.08
4513 4808 1.651770 TGGATTACTCCTCCCAGACCT 59.348 52.381 0.29 0.00 42.59 3.85
4514 4809 1.763545 GTGGATTACTCCTCCCAGACC 59.236 57.143 0.29 0.00 42.59 3.85
4515 4810 2.753247 AGTGGATTACTCCTCCCAGAC 58.247 52.381 0.29 0.00 42.59 3.51
4516 4811 4.620086 TTAGTGGATTACTCCTCCCAGA 57.380 45.455 0.29 0.00 42.59 3.86
4517 4812 5.693769 TTTTAGTGGATTACTCCTCCCAG 57.306 43.478 0.29 0.00 42.59 4.45
4537 4832 2.174685 ACAAGGAAGTGGCCCTTTTT 57.825 45.000 0.00 0.06 41.79 1.94
4538 4833 2.177016 AGTACAAGGAAGTGGCCCTTTT 59.823 45.455 0.00 0.00 41.79 2.27
4539 4834 1.780919 AGTACAAGGAAGTGGCCCTTT 59.219 47.619 0.00 0.00 41.79 3.11
4540 4835 1.351350 GAGTACAAGGAAGTGGCCCTT 59.649 52.381 0.00 2.67 44.36 3.95
4541 4836 0.984995 GAGTACAAGGAAGTGGCCCT 59.015 55.000 0.00 0.00 35.03 5.19
4542 4837 0.035343 GGAGTACAAGGAAGTGGCCC 60.035 60.000 0.00 0.00 0.00 5.80
4543 4838 0.035343 GGGAGTACAAGGAAGTGGCC 60.035 60.000 0.00 0.00 0.00 5.36
4544 4839 0.984995 AGGGAGTACAAGGAAGTGGC 59.015 55.000 0.00 0.00 0.00 5.01
4545 4840 2.234908 CAGAGGGAGTACAAGGAAGTGG 59.765 54.545 0.00 0.00 0.00 4.00
4546 4841 2.900546 ACAGAGGGAGTACAAGGAAGTG 59.099 50.000 0.00 0.00 0.00 3.16
4547 4842 3.166679 GACAGAGGGAGTACAAGGAAGT 58.833 50.000 0.00 0.00 0.00 3.01
4548 4843 3.056465 GTGACAGAGGGAGTACAAGGAAG 60.056 52.174 0.00 0.00 0.00 3.46
4549 4844 2.897969 GTGACAGAGGGAGTACAAGGAA 59.102 50.000 0.00 0.00 0.00 3.36
4550 4845 2.158370 TGTGACAGAGGGAGTACAAGGA 60.158 50.000 0.00 0.00 0.00 3.36
4551 4846 2.232452 CTGTGACAGAGGGAGTACAAGG 59.768 54.545 6.79 0.00 32.44 3.61
4552 4847 2.894126 ACTGTGACAGAGGGAGTACAAG 59.106 50.000 20.97 0.00 35.18 3.16
4553 4848 2.958818 ACTGTGACAGAGGGAGTACAA 58.041 47.619 20.97 0.00 35.18 2.41
4554 4849 2.628178 CAACTGTGACAGAGGGAGTACA 59.372 50.000 20.97 0.00 35.18 2.90
4555 4850 2.610727 GCAACTGTGACAGAGGGAGTAC 60.611 54.545 20.97 0.00 35.18 2.73
4556 4851 1.618837 GCAACTGTGACAGAGGGAGTA 59.381 52.381 20.97 0.00 35.18 2.59
4557 4852 0.394565 GCAACTGTGACAGAGGGAGT 59.605 55.000 20.97 0.00 35.18 3.85
4558 4853 0.394192 TGCAACTGTGACAGAGGGAG 59.606 55.000 20.97 5.02 35.18 4.30
4559 4854 0.836606 TTGCAACTGTGACAGAGGGA 59.163 50.000 20.97 8.91 35.18 4.20
4560 4855 1.679139 TTTGCAACTGTGACAGAGGG 58.321 50.000 20.97 8.90 35.18 4.30
4561 4856 3.781079 TTTTTGCAACTGTGACAGAGG 57.219 42.857 20.97 11.44 35.18 3.69
4562 4857 6.800408 CAGATATTTTTGCAACTGTGACAGAG 59.200 38.462 20.97 12.15 35.18 3.35
4563 4858 6.294120 CCAGATATTTTTGCAACTGTGACAGA 60.294 38.462 20.97 0.00 35.18 3.41
4564 4859 5.860182 CCAGATATTTTTGCAACTGTGACAG 59.140 40.000 11.70 11.70 37.52 3.51
4565 4860 5.278907 CCCAGATATTTTTGCAACTGTGACA 60.279 40.000 0.00 0.00 0.00 3.58
4566 4861 5.048083 TCCCAGATATTTTTGCAACTGTGAC 60.048 40.000 0.00 0.00 0.00 3.67
4567 4862 5.048083 GTCCCAGATATTTTTGCAACTGTGA 60.048 40.000 0.00 0.00 0.00 3.58
4568 4863 5.163513 GTCCCAGATATTTTTGCAACTGTG 58.836 41.667 0.00 0.00 0.00 3.66
4569 4864 4.220602 GGTCCCAGATATTTTTGCAACTGT 59.779 41.667 0.00 0.00 0.00 3.55
4570 4865 4.220382 TGGTCCCAGATATTTTTGCAACTG 59.780 41.667 0.00 1.67 0.00 3.16
4571 4866 4.415596 TGGTCCCAGATATTTTTGCAACT 58.584 39.130 0.00 0.00 0.00 3.16
4572 4867 4.799564 TGGTCCCAGATATTTTTGCAAC 57.200 40.909 0.00 0.00 0.00 4.17
4573 4868 5.306678 ACTTTGGTCCCAGATATTTTTGCAA 59.693 36.000 0.00 0.00 0.00 4.08
4574 4869 4.837860 ACTTTGGTCCCAGATATTTTTGCA 59.162 37.500 0.00 0.00 0.00 4.08
4575 4870 5.170748 CACTTTGGTCCCAGATATTTTTGC 58.829 41.667 0.00 0.00 0.00 3.68
4576 4871 5.723295 CCACTTTGGTCCCAGATATTTTTG 58.277 41.667 0.00 0.00 31.35 2.44
4591 4886 6.710744 AGTACTTCAATCACTAACCACTTTGG 59.289 38.462 0.00 0.00 45.02 3.28
4592 4887 7.441157 TCAGTACTTCAATCACTAACCACTTTG 59.559 37.037 0.00 0.00 0.00 2.77
4593 4888 7.506114 TCAGTACTTCAATCACTAACCACTTT 58.494 34.615 0.00 0.00 0.00 2.66
4594 4889 7.062749 TCAGTACTTCAATCACTAACCACTT 57.937 36.000 0.00 0.00 0.00 3.16
4595 4890 6.665992 TCAGTACTTCAATCACTAACCACT 57.334 37.500 0.00 0.00 0.00 4.00
4596 4891 7.724305 TTTCAGTACTTCAATCACTAACCAC 57.276 36.000 0.00 0.00 0.00 4.16
4597 4892 8.918202 ATTTTCAGTACTTCAATCACTAACCA 57.082 30.769 0.00 0.00 0.00 3.67
4599 4894 9.974750 GCTATTTTCAGTACTTCAATCACTAAC 57.025 33.333 0.00 0.00 0.00 2.34
4600 4895 9.719355 TGCTATTTTCAGTACTTCAATCACTAA 57.281 29.630 0.00 0.00 0.00 2.24
4601 4896 9.890629 ATGCTATTTTCAGTACTTCAATCACTA 57.109 29.630 0.00 0.00 0.00 2.74
4602 4897 8.798859 ATGCTATTTTCAGTACTTCAATCACT 57.201 30.769 0.00 0.00 0.00 3.41
4603 4898 7.848051 CGATGCTATTTTCAGTACTTCAATCAC 59.152 37.037 0.00 0.00 0.00 3.06
4604 4899 7.011389 CCGATGCTATTTTCAGTACTTCAATCA 59.989 37.037 0.00 0.00 0.00 2.57
4605 4900 7.011482 ACCGATGCTATTTTCAGTACTTCAATC 59.989 37.037 0.00 0.00 0.00 2.67
4606 4901 6.823689 ACCGATGCTATTTTCAGTACTTCAAT 59.176 34.615 0.00 0.00 0.00 2.57
4607 4902 6.170506 ACCGATGCTATTTTCAGTACTTCAA 58.829 36.000 0.00 0.00 0.00 2.69
4608 4903 5.730550 ACCGATGCTATTTTCAGTACTTCA 58.269 37.500 0.00 0.00 0.00 3.02
4609 4904 6.663944 AACCGATGCTATTTTCAGTACTTC 57.336 37.500 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.