Multiple sequence alignment - TraesCS1A01G398500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G398500 chr1A 100.000 3465 0 0 1 3465 563685386 563688850 0.000000e+00 6399
1 TraesCS1A01G398500 chr1A 82.865 1459 204 27 1301 2735 563765409 563766845 0.000000e+00 1267
2 TraesCS1A01G398500 chr1A 80.590 1458 244 26 1301 2735 563783580 563785021 0.000000e+00 1088
3 TraesCS1A01G398500 chr1A 76.621 663 89 43 828 1465 563764606 563765227 4.340000e-79 305
4 TraesCS1A01G398500 chr1B 90.532 3517 188 69 1 3465 652458462 652461885 0.000000e+00 4516
5 TraesCS1A01G398500 chr1B 79.432 1619 264 45 1328 2918 652569942 652571519 0.000000e+00 1081
6 TraesCS1A01G398500 chr1B 82.434 1241 184 22 1331 2553 652463297 652464521 0.000000e+00 1053
7 TraesCS1A01G398500 chr1B 80.853 1384 225 22 1378 2735 652564680 652566049 0.000000e+00 1051
8 TraesCS1A01G398500 chr1B 79.893 1303 218 28 1373 2645 652574805 652576093 0.000000e+00 915
9 TraesCS1A01G398500 chr1B 81.865 783 136 5 1301 2082 652467680 652468457 0.000000e+00 654
10 TraesCS1A01G398500 chr1B 76.097 661 87 44 833 1465 652485091 652485708 2.630000e-71 279
11 TraesCS1A01G398500 chr1B 80.405 148 16 6 2497 2633 652577097 652577242 2.200000e-17 100
12 TraesCS1A01G398500 chr1D 88.852 3588 187 86 1 3465 470076205 470079702 0.000000e+00 4213
13 TraesCS1A01G398500 chr1D 83.312 1540 200 37 1331 2847 470081074 470082579 0.000000e+00 1367
14 TraesCS1A01G398500 chr1D 82.740 1460 203 30 1301 2735 470124139 470125574 0.000000e+00 1254
15 TraesCS1A01G398500 chr1D 81.590 1195 192 17 1327 2505 470190101 470191283 0.000000e+00 963
16 TraesCS1A01G398500 chr1D 81.737 783 127 12 1301 2078 470180504 470181275 1.050000e-179 640
17 TraesCS1A01G398500 chr1D 76.558 674 85 43 827 1465 470123328 470123963 5.620000e-78 302
18 TraesCS1A01G398500 chr5A 92.793 222 16 0 260 481 383882936 383883157 4.310000e-84 322
19 TraesCS1A01G398500 chr5D 92.070 227 18 0 255 481 291500851 291501077 1.550000e-83 320
20 TraesCS1A01G398500 chr5B 92.070 227 18 0 255 481 332202775 332203001 1.550000e-83 320
21 TraesCS1A01G398500 chr7D 91.204 216 19 0 260 475 477072517 477072302 9.400000e-76 294
22 TraesCS1A01G398500 chr7A 91.204 216 19 0 260 475 518809464 518809679 9.400000e-76 294
23 TraesCS1A01G398500 chr7B 90.741 216 20 0 260 475 501508726 501508511 4.380000e-74 289
24 TraesCS1A01G398500 chr3B 90.323 217 21 0 262 478 525228427 525228211 5.660000e-73 285


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G398500 chr1A 563685386 563688850 3464 False 6399.000000 6399 100.000000 1 3465 1 chr1A.!!$F1 3464
1 TraesCS1A01G398500 chr1A 563783580 563785021 1441 False 1088.000000 1088 80.590000 1301 2735 1 chr1A.!!$F2 1434
2 TraesCS1A01G398500 chr1A 563764606 563766845 2239 False 786.000000 1267 79.743000 828 2735 2 chr1A.!!$F3 1907
3 TraesCS1A01G398500 chr1B 652458462 652468457 9995 False 2074.333333 4516 84.943667 1 3465 3 chr1B.!!$F2 3464
4 TraesCS1A01G398500 chr1B 652564680 652577242 12562 False 786.750000 1081 80.145750 1328 2918 4 chr1B.!!$F3 1590
5 TraesCS1A01G398500 chr1B 652485091 652485708 617 False 279.000000 279 76.097000 833 1465 1 chr1B.!!$F1 632
6 TraesCS1A01G398500 chr1D 470076205 470082579 6374 False 2790.000000 4213 86.082000 1 3465 2 chr1D.!!$F3 3464
7 TraesCS1A01G398500 chr1D 470190101 470191283 1182 False 963.000000 963 81.590000 1327 2505 1 chr1D.!!$F2 1178
8 TraesCS1A01G398500 chr1D 470123328 470125574 2246 False 778.000000 1254 79.649000 827 2735 2 chr1D.!!$F4 1908
9 TraesCS1A01G398500 chr1D 470180504 470181275 771 False 640.000000 640 81.737000 1301 2078 1 chr1D.!!$F1 777

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
799 865 0.107831 CACGGTCCTTCCCACTCAAA 59.892 55.0 0.0 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2591 16536 0.180406 ATGGCACGGTCAGATAACCC 59.82 55.0 0.0 0.0 35.79 4.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 8.568794 GCTAAAAATATGATACCCTGAACCTTC 58.431 37.037 0.00 0.00 0.00 3.46
35 36 9.627123 CTAAAAATATGATACCCTGAACCTTCA 57.373 33.333 0.00 0.00 35.57 3.02
46 48 2.507484 TGAACCTTCAGTGAAGCATGG 58.493 47.619 24.85 15.80 38.24 3.66
51 53 0.111061 TTCAGTGAAGCATGGCAGGT 59.889 50.000 0.08 0.00 0.00 4.00
84 86 3.258372 TGGGAAGCTATGTATGGATCGAC 59.742 47.826 0.00 0.00 0.00 4.20
85 87 3.258372 GGGAAGCTATGTATGGATCGACA 59.742 47.826 0.00 0.00 0.00 4.35
110 112 6.592607 ACAATGCCAAATCAAATCTCAACATC 59.407 34.615 0.00 0.00 0.00 3.06
210 231 2.048597 CACCGGCTGCTGTAACGA 60.049 61.111 0.00 0.00 0.00 3.85
226 247 4.825679 GACAGGGGAGGGAGGGGG 62.826 77.778 0.00 0.00 0.00 5.40
241 264 3.097162 GGGGGTGGATCTGGGGAC 61.097 72.222 0.00 0.00 0.00 4.46
475 502 2.036098 TCGTCCTCCGCCCTGTAA 59.964 61.111 0.00 0.00 36.19 2.41
488 515 1.694048 CCCTGTAAGCCATCTCCCTCT 60.694 57.143 0.00 0.00 0.00 3.69
489 516 1.691434 CCTGTAAGCCATCTCCCTCTC 59.309 57.143 0.00 0.00 0.00 3.20
490 517 1.691434 CTGTAAGCCATCTCCCTCTCC 59.309 57.143 0.00 0.00 0.00 3.71
492 519 0.944999 TAAGCCATCTCCCTCTCCCT 59.055 55.000 0.00 0.00 0.00 4.20
493 520 0.399806 AAGCCATCTCCCTCTCCCTC 60.400 60.000 0.00 0.00 0.00 4.30
494 521 1.235696 GCCATCTCCCTCTCCCTCT 59.764 63.158 0.00 0.00 0.00 3.69
560 604 4.729918 CCCTCCTTGCCGCTGCTT 62.730 66.667 0.70 0.00 38.71 3.91
606 665 2.781158 GCCGTGGTTGTTGTGGCTT 61.781 57.895 0.00 0.00 42.44 4.35
607 666 1.358759 CCGTGGTTGTTGTGGCTTC 59.641 57.895 0.00 0.00 0.00 3.86
608 667 1.358759 CGTGGTTGTTGTGGCTTCC 59.641 57.895 0.00 0.00 0.00 3.46
609 668 1.358759 GTGGTTGTTGTGGCTTCCG 59.641 57.895 0.00 0.00 0.00 4.30
692 751 3.275271 TGCCTGGGCCCAAGGAAT 61.275 61.111 32.73 0.00 41.09 3.01
703 762 1.538047 CCAAGGAATGGGAGTGTGTG 58.462 55.000 0.00 0.00 46.27 3.82
704 763 0.883833 CAAGGAATGGGAGTGTGTGC 59.116 55.000 0.00 0.00 0.00 4.57
705 764 0.773644 AAGGAATGGGAGTGTGTGCT 59.226 50.000 0.00 0.00 0.00 4.40
706 765 0.326264 AGGAATGGGAGTGTGTGCTC 59.674 55.000 0.00 0.00 34.89 4.26
709 768 2.027192 GGAATGGGAGTGTGTGCTCTAA 60.027 50.000 0.00 0.00 35.89 2.10
712 771 0.737715 GGGAGTGTGTGCTCTAAGCG 60.738 60.000 0.00 0.00 46.26 4.68
713 772 0.243907 GGAGTGTGTGCTCTAAGCGA 59.756 55.000 0.00 0.00 46.26 4.93
740 806 2.367202 CCCAGTCCAGCCCATACGT 61.367 63.158 0.00 0.00 0.00 3.57
793 859 1.052124 ACTTCACACGGTCCTTCCCA 61.052 55.000 0.00 0.00 0.00 4.37
794 860 0.602905 CTTCACACGGTCCTTCCCAC 60.603 60.000 0.00 0.00 0.00 4.61
797 863 1.458777 ACACGGTCCTTCCCACTCA 60.459 57.895 0.00 0.00 0.00 3.41
798 864 1.052124 ACACGGTCCTTCCCACTCAA 61.052 55.000 0.00 0.00 0.00 3.02
799 865 0.107831 CACGGTCCTTCCCACTCAAA 59.892 55.000 0.00 0.00 0.00 2.69
825 891 4.222124 AGAGAGAGAGAGAGAACCAGTC 57.778 50.000 0.00 0.00 0.00 3.51
847 917 3.302347 CTCCACTCCACTGACGGCC 62.302 68.421 0.00 0.00 0.00 6.13
1003 1094 4.883354 GCTTGGGAGCCGGGATGG 62.883 72.222 2.18 0.00 43.29 3.51
1065 1158 2.804167 CAGATCGACGCCTGCTCT 59.196 61.111 0.00 0.00 0.00 4.09
1096 1198 0.246086 GCCTATGATCTCTGGCCTCG 59.754 60.000 3.32 0.00 39.49 4.63
1097 1199 0.246086 CCTATGATCTCTGGCCTCGC 59.754 60.000 3.32 0.00 0.00 5.03
1246 1361 2.231235 TGCAGTCATTCTTCTCGCTGTA 59.769 45.455 0.00 0.00 0.00 2.74
1262 1377 3.381272 CGCTGTATTTGGTTGGAATGGAT 59.619 43.478 0.00 0.00 0.00 3.41
1263 1378 4.685924 GCTGTATTTGGTTGGAATGGATG 58.314 43.478 0.00 0.00 0.00 3.51
1264 1379 4.441913 GCTGTATTTGGTTGGAATGGATGG 60.442 45.833 0.00 0.00 0.00 3.51
1269 1384 1.194218 GGTTGGAATGGATGGTTGGG 58.806 55.000 0.00 0.00 0.00 4.12
1290 1405 1.197721 GTTCGATGAAAGGGCAGTGTG 59.802 52.381 0.00 0.00 0.00 3.82
1291 1406 0.321564 TCGATGAAAGGGCAGTGTGG 60.322 55.000 0.00 0.00 0.00 4.17
1292 1407 0.606401 CGATGAAAGGGCAGTGTGGT 60.606 55.000 0.00 0.00 0.00 4.16
1293 1408 1.168714 GATGAAAGGGCAGTGTGGTC 58.831 55.000 0.00 0.00 0.00 4.02
1295 1410 2.594592 AAAGGGCAGTGTGGTCGC 60.595 61.111 0.00 0.00 0.00 5.19
1834 6130 6.042093 AGCTGCACATAAGTAAGCTAATCCTA 59.958 38.462 1.02 0.00 42.15 2.94
2042 6338 2.203480 GCCAGGACCAAAGCACCA 60.203 61.111 0.00 0.00 0.00 4.17
2093 6389 1.383109 ATCGAGGGTGAGCCATGGA 60.383 57.895 18.40 0.00 37.67 3.41
2146 10086 1.002430 TGCAAGAAGCTCTACCTGGTG 59.998 52.381 10.23 0.00 45.94 4.17
2151 10091 1.205893 GAAGCTCTACCTGGTGGAGTG 59.794 57.143 32.33 16.23 42.01 3.51
2176 10116 2.461110 GGCGTTGCTGATGGTACGG 61.461 63.158 0.00 0.00 34.76 4.02
2183 10123 3.151710 TGATGGTACGGAGGGCGG 61.152 66.667 0.00 0.00 0.00 6.13
2230 10170 2.051345 CGCGGTGAAGTTGTTGCC 60.051 61.111 0.00 0.00 0.00 4.52
2231 10171 2.829206 CGCGGTGAAGTTGTTGCCA 61.829 57.895 0.00 0.00 0.00 4.92
2235 10175 1.810031 CGGTGAAGTTGTTGCCAGAGA 60.810 52.381 0.00 0.00 0.00 3.10
2240 10180 0.761187 AGTTGTTGCCAGAGAGAGCA 59.239 50.000 0.00 0.00 37.18 4.26
2242 10182 0.604780 TTGTTGCCAGAGAGAGCAGC 60.605 55.000 0.00 0.00 40.73 5.25
2254 10194 3.560105 AGAGAGCAGCTTTGAGGTTTTT 58.440 40.909 0.00 0.00 0.00 1.94
2255 10195 3.317430 AGAGAGCAGCTTTGAGGTTTTTG 59.683 43.478 0.00 0.00 0.00 2.44
2285 10225 0.888736 TGAGCATTCACGGTGGGTTG 60.889 55.000 8.50 5.07 0.00 3.77
2294 10234 2.032071 GGTGGGTTGAGGTGTCGG 59.968 66.667 0.00 0.00 0.00 4.79
2297 10237 2.430367 GGGTTGAGGTGTCGGCTT 59.570 61.111 0.00 0.00 0.00 4.35
2334 10280 1.689233 TAGGGCGAAGGTGCTCCAT 60.689 57.895 7.70 0.00 35.32 3.41
2337 10283 2.045926 GCGAAGGTGCTCCATGGT 60.046 61.111 12.58 0.00 35.89 3.55
2353 15126 3.004734 CCATGGTTTTGTCCTTGTCTCAC 59.995 47.826 2.57 0.00 32.81 3.51
2360 15133 3.184382 TGTCCTTGTCTCACTATGGGA 57.816 47.619 0.00 0.00 0.00 4.37
2365 15138 2.103153 TGTCTCACTATGGGATCCCC 57.897 55.000 28.58 10.76 45.71 4.81
2406 15179 5.845065 TCTTGGATGATGATGAGGAGAATCT 59.155 40.000 0.00 0.00 33.73 2.40
2408 15181 5.866207 TGGATGATGATGAGGAGAATCTTG 58.134 41.667 0.00 0.00 33.73 3.02
2457 15230 3.244422 ACTTCTTTCGGCACCTATGACAA 60.244 43.478 0.00 0.00 30.51 3.18
2460 15233 3.197766 TCTTTCGGCACCTATGACAAGAT 59.802 43.478 0.00 0.00 30.51 2.40
2461 15234 2.890808 TCGGCACCTATGACAAGATC 57.109 50.000 0.00 0.00 30.51 2.75
2463 15236 2.101415 TCGGCACCTATGACAAGATCTG 59.899 50.000 0.00 0.00 30.51 2.90
2464 15237 2.101415 CGGCACCTATGACAAGATCTGA 59.899 50.000 0.00 0.00 30.51 3.27
2468 15243 4.142071 GCACCTATGACAAGATCTGACAGA 60.142 45.833 7.80 7.80 33.16 3.41
2540 16475 3.207669 GCAGCATGGCTCTTCCCG 61.208 66.667 0.00 0.00 36.40 5.14
2563 16498 1.001633 GGACTGAAGCGGAGGTGTTAA 59.998 52.381 0.00 0.00 39.47 2.01
2581 16523 6.546034 GGTGTTAAACTGTTATCCCTATGCAT 59.454 38.462 3.79 3.79 0.00 3.96
2588 16530 3.152341 GTTATCCCTATGCATGCTGCTT 58.848 45.455 20.33 3.81 45.31 3.91
2590 16535 0.841961 TCCCTATGCATGCTGCTTCT 59.158 50.000 20.33 0.00 45.31 2.85
2591 16536 0.952280 CCCTATGCATGCTGCTTCTG 59.048 55.000 20.33 0.93 45.31 3.02
2608 16553 0.462047 CTGGGTTATCTGACCGTGCC 60.462 60.000 0.00 0.00 40.75 5.01
2613 16637 2.135933 GTTATCTGACCGTGCCATAGC 58.864 52.381 0.00 0.00 40.48 2.97
2632 16656 2.825532 AGCTGTTGTTGTTCAGTGGTTT 59.174 40.909 0.00 0.00 34.57 3.27
2633 16657 3.119495 AGCTGTTGTTGTTCAGTGGTTTC 60.119 43.478 0.00 0.00 34.57 2.78
2656 16680 1.536766 TGCAAGCTGCTCACATGTTAC 59.463 47.619 1.00 0.00 45.31 2.50
2735 16927 7.681782 GCAAGCCATGAAATGCATTAGTAGTAA 60.682 37.037 13.39 0.00 44.97 2.24
2738 16930 8.917088 AGCCATGAAATGCATTAGTAGTAATTT 58.083 29.630 13.39 0.00 44.97 1.82
2762 16955 8.818622 TTATCTGAGCTAGGTTACTCTGTTAA 57.181 34.615 0.00 0.00 34.52 2.01
2763 16956 6.761099 TCTGAGCTAGGTTACTCTGTTAAG 57.239 41.667 0.00 0.00 34.52 1.85
2767 16960 3.858238 GCTAGGTTACTCTGTTAAGTGCG 59.142 47.826 0.00 0.00 0.00 5.34
2770 16964 3.069158 AGGTTACTCTGTTAAGTGCGTGT 59.931 43.478 0.00 0.00 0.00 4.49
2773 16967 5.636543 GGTTACTCTGTTAAGTGCGTGTATT 59.363 40.000 0.00 0.00 0.00 1.89
2778 16972 7.025963 ACTCTGTTAAGTGCGTGTATTAGTAC 58.974 38.462 0.00 0.00 0.00 2.73
2781 16975 7.539710 TCTGTTAAGTGCGTGTATTAGTACTTG 59.460 37.037 0.00 0.00 41.89 3.16
2791 16985 7.428761 GCGTGTATTAGTACTTGTCTGAACTAG 59.571 40.741 0.00 0.00 34.82 2.57
2802 16996 6.706270 ACTTGTCTGAACTAGTAATTGTGGTG 59.294 38.462 0.00 0.00 39.28 4.17
2803 16997 5.547465 TGTCTGAACTAGTAATTGTGGTGG 58.453 41.667 0.00 0.00 0.00 4.61
2804 16998 5.071250 TGTCTGAACTAGTAATTGTGGTGGT 59.929 40.000 0.00 0.00 0.00 4.16
2805 16999 5.995897 GTCTGAACTAGTAATTGTGGTGGTT 59.004 40.000 0.00 0.00 0.00 3.67
2806 17000 5.995282 TCTGAACTAGTAATTGTGGTGGTTG 59.005 40.000 0.00 0.00 0.00 3.77
2807 17001 5.931294 TGAACTAGTAATTGTGGTGGTTGA 58.069 37.500 0.00 0.00 0.00 3.18
2824 17018 4.691860 GTTGATATGCAAGCTGTTGACT 57.308 40.909 0.00 0.00 37.12 3.41
2828 17022 1.683943 ATGCAAGCTGTTGACTGTGT 58.316 45.000 0.00 0.00 35.46 3.72
2832 17026 0.178068 AAGCTGTTGACTGTGTCGGT 59.822 50.000 0.00 0.00 34.95 4.69
2847 17041 3.001939 GTGTCGGTTTTCAACTGGTACTG 59.998 47.826 0.00 0.00 38.33 2.74
2849 17043 3.001939 GTCGGTTTTCAACTGGTACTGTG 59.998 47.826 0.00 0.00 41.30 3.66
2850 17044 2.289547 CGGTTTTCAACTGGTACTGTGG 59.710 50.000 0.00 0.00 41.30 4.17
2853 17047 4.439563 GGTTTTCAACTGGTACTGTGGTTG 60.440 45.833 11.50 11.50 41.30 3.77
2854 17048 3.637911 TTCAACTGGTACTGTGGTTGT 57.362 42.857 14.81 0.00 41.30 3.32
2855 17049 3.637911 TCAACTGGTACTGTGGTTGTT 57.362 42.857 14.81 3.05 41.30 2.83
2856 17050 3.275143 TCAACTGGTACTGTGGTTGTTG 58.725 45.455 14.81 11.75 41.30 3.33
2857 17051 1.675552 ACTGGTACTGTGGTTGTTGC 58.324 50.000 0.00 0.00 39.59 4.17
2858 17052 0.951558 CTGGTACTGTGGTTGTTGCC 59.048 55.000 0.00 0.00 0.00 4.52
2859 17053 0.548989 TGGTACTGTGGTTGTTGCCT 59.451 50.000 0.00 0.00 0.00 4.75
2860 17054 0.951558 GGTACTGTGGTTGTTGCCTG 59.048 55.000 0.00 0.00 0.00 4.85
2861 17055 1.675552 GTACTGTGGTTGTTGCCTGT 58.324 50.000 0.00 0.00 0.00 4.00
2862 17056 1.333619 GTACTGTGGTTGTTGCCTGTG 59.666 52.381 0.00 0.00 0.00 3.66
2863 17057 1.066257 CTGTGGTTGTTGCCTGTGC 59.934 57.895 0.00 0.00 38.26 4.57
2864 17058 2.354074 CTGTGGTTGTTGCCTGTGCC 62.354 60.000 0.00 0.00 36.33 5.01
2865 17059 2.127232 GTGGTTGTTGCCTGTGCCT 61.127 57.895 0.00 0.00 36.33 4.75
2866 17060 0.821711 GTGGTTGTTGCCTGTGCCTA 60.822 55.000 0.00 0.00 36.33 3.93
2867 17061 0.821711 TGGTTGTTGCCTGTGCCTAC 60.822 55.000 0.00 0.00 36.33 3.18
2868 17062 1.574428 GTTGTTGCCTGTGCCTACG 59.426 57.895 0.00 0.00 36.33 3.51
2869 17063 0.882927 GTTGTTGCCTGTGCCTACGA 60.883 55.000 0.00 0.00 36.33 3.43
2870 17064 0.179043 TTGTTGCCTGTGCCTACGAA 60.179 50.000 0.00 0.00 36.33 3.85
2871 17065 0.179043 TGTTGCCTGTGCCTACGAAA 60.179 50.000 0.00 0.00 36.33 3.46
2872 17066 0.948678 GTTGCCTGTGCCTACGAAAA 59.051 50.000 0.00 0.00 36.33 2.29
2873 17067 1.335496 GTTGCCTGTGCCTACGAAAAA 59.665 47.619 0.00 0.00 36.33 1.94
2896 17090 9.822185 AAAAACTCAAAATGCATAACTTCTTCT 57.178 25.926 0.00 0.00 0.00 2.85
2897 17091 9.468532 AAAACTCAAAATGCATAACTTCTTCTC 57.531 29.630 0.00 0.00 0.00 2.87
2898 17092 7.992754 ACTCAAAATGCATAACTTCTTCTCT 57.007 32.000 0.00 0.00 0.00 3.10
2899 17093 7.814642 ACTCAAAATGCATAACTTCTTCTCTG 58.185 34.615 0.00 0.00 0.00 3.35
2900 17094 7.446625 ACTCAAAATGCATAACTTCTTCTCTGT 59.553 33.333 0.00 0.00 0.00 3.41
2901 17095 8.846943 TCAAAATGCATAACTTCTTCTCTGTA 57.153 30.769 0.00 0.00 0.00 2.74
2902 17096 9.453572 TCAAAATGCATAACTTCTTCTCTGTAT 57.546 29.630 0.00 0.00 0.00 2.29
2903 17097 9.713740 CAAAATGCATAACTTCTTCTCTGTATC 57.286 33.333 0.00 0.00 0.00 2.24
2904 17098 9.678260 AAAATGCATAACTTCTTCTCTGTATCT 57.322 29.630 0.00 0.00 0.00 1.98
2905 17099 9.678260 AAATGCATAACTTCTTCTCTGTATCTT 57.322 29.630 0.00 0.00 0.00 2.40
2906 17100 9.678260 AATGCATAACTTCTTCTCTGTATCTTT 57.322 29.630 0.00 0.00 0.00 2.52
2907 17101 8.484641 TGCATAACTTCTTCTCTGTATCTTTG 57.515 34.615 0.00 0.00 0.00 2.77
2908 17102 8.314021 TGCATAACTTCTTCTCTGTATCTTTGA 58.686 33.333 0.00 0.00 0.00 2.69
2909 17103 8.599774 GCATAACTTCTTCTCTGTATCTTTGAC 58.400 37.037 0.00 0.00 0.00 3.18
2910 17104 9.645059 CATAACTTCTTCTCTGTATCTTTGACA 57.355 33.333 0.00 0.00 0.00 3.58
2912 17106 8.545229 AACTTCTTCTCTGTATCTTTGACATG 57.455 34.615 0.00 0.00 0.00 3.21
2913 17107 7.102346 ACTTCTTCTCTGTATCTTTGACATGG 58.898 38.462 0.00 0.00 0.00 3.66
2914 17108 6.611613 TCTTCTCTGTATCTTTGACATGGT 57.388 37.500 0.00 0.00 0.00 3.55
2915 17109 6.401394 TCTTCTCTGTATCTTTGACATGGTG 58.599 40.000 0.00 0.00 0.00 4.17
2916 17110 5.089970 TCTCTGTATCTTTGACATGGTGG 57.910 43.478 0.00 0.00 0.00 4.61
2917 17111 4.532126 TCTCTGTATCTTTGACATGGTGGT 59.468 41.667 0.00 0.00 0.00 4.16
2918 17112 4.832248 TCTGTATCTTTGACATGGTGGTC 58.168 43.478 0.00 0.00 38.29 4.02
2919 17113 4.532126 TCTGTATCTTTGACATGGTGGTCT 59.468 41.667 0.00 0.00 38.61 3.85
2932 17126 5.940470 ACATGGTGGTCTCTTTTATCTGAAC 59.060 40.000 0.00 0.00 0.00 3.18
2934 17128 6.928348 TGGTGGTCTCTTTTATCTGAACTA 57.072 37.500 0.00 0.00 0.00 2.24
2935 17129 6.936279 TGGTGGTCTCTTTTATCTGAACTAG 58.064 40.000 0.00 0.00 0.00 2.57
2936 17130 6.070767 TGGTGGTCTCTTTTATCTGAACTAGG 60.071 42.308 0.00 0.00 0.00 3.02
2939 17133 8.529476 GTGGTCTCTTTTATCTGAACTAGGTTA 58.471 37.037 0.00 0.00 0.00 2.85
2940 17134 8.529476 TGGTCTCTTTTATCTGAACTAGGTTAC 58.471 37.037 0.00 0.00 0.00 2.50
2941 17135 8.751242 GGTCTCTTTTATCTGAACTAGGTTACT 58.249 37.037 0.00 0.00 0.00 2.24
2942 17136 9.791820 GTCTCTTTTATCTGAACTAGGTTACTC 57.208 37.037 0.00 0.00 0.00 2.59
2944 17138 9.796120 CTCTTTTATCTGAACTAGGTTACTCTG 57.204 37.037 0.00 0.00 0.00 3.35
2949 17143 9.750783 TTATCTGAACTAGGTTACTCTGTTAGT 57.249 33.333 0.00 0.00 42.62 2.24
2951 17145 9.750783 ATCTGAACTAGGTTACTCTGTTAGTTA 57.249 33.333 0.00 0.00 39.80 2.24
2953 17147 8.696043 TGAACTAGGTTACTCTGTTAGTTACA 57.304 34.615 0.00 0.00 39.09 2.41
2969 17163 9.305555 TGTTAGTTACAGTCTTATTCTGGTACT 57.694 33.333 0.00 0.00 37.25 2.73
2970 17164 9.786105 GTTAGTTACAGTCTTATTCTGGTACTC 57.214 37.037 0.00 0.00 37.25 2.59
2971 17165 9.750783 TTAGTTACAGTCTTATTCTGGTACTCT 57.249 33.333 0.00 0.00 37.25 3.24
2972 17166 8.057536 AGTTACAGTCTTATTCTGGTACTCTG 57.942 38.462 0.00 0.00 37.25 3.35
2973 17167 7.889073 AGTTACAGTCTTATTCTGGTACTCTGA 59.111 37.037 0.00 0.00 37.25 3.27
2974 17168 8.521176 GTTACAGTCTTATTCTGGTACTCTGAA 58.479 37.037 0.00 0.00 37.25 3.02
2975 17169 6.926313 ACAGTCTTATTCTGGTACTCTGAAC 58.074 40.000 0.00 0.00 36.40 3.18
2976 17170 6.722129 ACAGTCTTATTCTGGTACTCTGAACT 59.278 38.462 0.00 0.00 36.40 3.01
2977 17171 7.889073 ACAGTCTTATTCTGGTACTCTGAACTA 59.111 37.037 0.00 0.00 36.40 2.24
2978 17172 8.740906 CAGTCTTATTCTGGTACTCTGAACTAA 58.259 37.037 0.00 1.38 36.40 2.24
2979 17173 9.482175 AGTCTTATTCTGGTACTCTGAACTAAT 57.518 33.333 0.00 0.00 36.40 1.73
2985 17179 9.838339 ATTCTGGTACTCTGAACTAATTTATGG 57.162 33.333 0.00 0.00 36.40 2.74
2986 17180 8.375493 TCTGGTACTCTGAACTAATTTATGGT 57.625 34.615 0.00 0.00 0.00 3.55
2987 17181 8.475639 TCTGGTACTCTGAACTAATTTATGGTC 58.524 37.037 0.00 0.00 0.00 4.02
2988 17182 7.262772 TGGTACTCTGAACTAATTTATGGTCG 58.737 38.462 0.00 0.00 0.00 4.79
2989 17183 7.093640 TGGTACTCTGAACTAATTTATGGTCGT 60.094 37.037 0.00 0.00 0.00 4.34
2990 17184 7.763071 GGTACTCTGAACTAATTTATGGTCGTT 59.237 37.037 0.00 0.00 0.00 3.85
2991 17185 9.793252 GTACTCTGAACTAATTTATGGTCGTTA 57.207 33.333 0.00 0.00 0.00 3.18
2993 17187 9.886132 ACTCTGAACTAATTTATGGTCGTTAAT 57.114 29.630 0.00 0.00 0.00 1.40
2995 17189 9.661563 TCTGAACTAATTTATGGTCGTTAATGT 57.338 29.630 0.00 0.00 0.00 2.71
2996 17190 9.702726 CTGAACTAATTTATGGTCGTTAATGTG 57.297 33.333 0.00 0.00 0.00 3.21
2997 17191 8.178964 TGAACTAATTTATGGTCGTTAATGTGC 58.821 33.333 0.00 0.00 0.00 4.57
2998 17192 7.618502 ACTAATTTATGGTCGTTAATGTGCA 57.381 32.000 0.00 0.00 0.00 4.57
2999 17193 8.046294 ACTAATTTATGGTCGTTAATGTGCAA 57.954 30.769 0.00 0.00 0.00 4.08
3000 17194 8.181573 ACTAATTTATGGTCGTTAATGTGCAAG 58.818 33.333 0.00 0.00 0.00 4.01
3001 17195 2.919666 ATGGTCGTTAATGTGCAAGC 57.080 45.000 0.00 0.00 0.00 4.01
3002 17196 1.890876 TGGTCGTTAATGTGCAAGCT 58.109 45.000 0.00 0.00 0.00 3.74
3003 17197 1.535028 TGGTCGTTAATGTGCAAGCTG 59.465 47.619 0.00 0.00 0.00 4.24
3004 17198 1.535462 GGTCGTTAATGTGCAAGCTGT 59.465 47.619 0.00 0.00 0.00 4.40
3005 17199 2.031157 GGTCGTTAATGTGCAAGCTGTT 60.031 45.455 0.00 0.00 0.00 3.16
3006 17200 3.187637 GGTCGTTAATGTGCAAGCTGTTA 59.812 43.478 0.00 0.00 0.00 2.41
3007 17201 4.319911 GGTCGTTAATGTGCAAGCTGTTAA 60.320 41.667 0.00 0.00 0.00 2.01
3008 17202 4.611366 GTCGTTAATGTGCAAGCTGTTAAC 59.389 41.667 0.00 0.00 33.91 2.01
3009 17203 4.513692 TCGTTAATGTGCAAGCTGTTAACT 59.486 37.500 7.22 0.00 34.66 2.24
3010 17204 4.612614 CGTTAATGTGCAAGCTGTTAACTG 59.387 41.667 7.22 7.67 34.66 3.16
3011 17205 2.712057 ATGTGCAAGCTGTTAACTGC 57.288 45.000 25.11 25.11 40.53 4.40
3012 17206 1.387539 TGTGCAAGCTGTTAACTGCA 58.612 45.000 31.16 23.13 42.33 4.41
3013 17207 1.955778 TGTGCAAGCTGTTAACTGCAT 59.044 42.857 31.16 21.27 42.33 3.96
3014 17208 2.361757 TGTGCAAGCTGTTAACTGCATT 59.638 40.909 31.16 21.34 42.33 3.56
3015 17209 2.727798 GTGCAAGCTGTTAACTGCATTG 59.272 45.455 31.16 28.40 42.33 2.82
3016 17210 2.288334 TGCAAGCTGTTAACTGCATTGG 60.288 45.455 31.16 20.30 42.33 3.16
3017 17211 2.288395 GCAAGCTGTTAACTGCATTGGT 60.288 45.455 31.16 13.57 42.33 3.67
3018 17212 3.568538 CAAGCTGTTAACTGCATTGGTC 58.431 45.455 31.16 7.79 42.33 4.02
3019 17213 3.146104 AGCTGTTAACTGCATTGGTCT 57.854 42.857 31.16 12.33 42.33 3.85
3020 17214 3.490348 AGCTGTTAACTGCATTGGTCTT 58.510 40.909 31.16 11.71 42.33 3.01
3021 17215 3.503748 AGCTGTTAACTGCATTGGTCTTC 59.496 43.478 31.16 5.95 42.33 2.87
3022 17216 3.253188 GCTGTTAACTGCATTGGTCTTCA 59.747 43.478 26.83 0.00 40.06 3.02
3023 17217 4.261572 GCTGTTAACTGCATTGGTCTTCAA 60.262 41.667 26.83 0.00 40.06 2.69
3024 17218 5.181690 TGTTAACTGCATTGGTCTTCAAC 57.818 39.130 7.22 0.00 38.31 3.18
3025 17219 4.887071 TGTTAACTGCATTGGTCTTCAACT 59.113 37.500 7.22 0.00 38.31 3.16
3026 17220 3.996150 AACTGCATTGGTCTTCAACTG 57.004 42.857 0.00 0.00 38.31 3.16
3027 17221 2.233271 ACTGCATTGGTCTTCAACTGG 58.767 47.619 0.00 0.00 38.31 4.00
3028 17222 2.233271 CTGCATTGGTCTTCAACTGGT 58.767 47.619 0.00 0.00 38.31 4.00
3029 17223 3.181445 ACTGCATTGGTCTTCAACTGGTA 60.181 43.478 0.00 0.00 38.31 3.25
3030 17224 3.146066 TGCATTGGTCTTCAACTGGTAC 58.854 45.455 0.00 0.00 38.31 3.34
3031 17225 2.488153 GCATTGGTCTTCAACTGGTACC 59.512 50.000 4.43 4.43 38.31 3.34
3032 17226 3.810743 GCATTGGTCTTCAACTGGTACCT 60.811 47.826 14.36 0.00 38.31 3.08
3033 17227 4.398319 CATTGGTCTTCAACTGGTACCTT 58.602 43.478 14.36 0.00 38.31 3.50
3034 17228 4.513406 TTGGTCTTCAACTGGTACCTTT 57.487 40.909 14.36 3.35 0.00 3.11
3035 17229 3.815809 TGGTCTTCAACTGGTACCTTTG 58.184 45.455 14.36 15.75 0.00 2.77
3036 17230 3.456644 TGGTCTTCAACTGGTACCTTTGA 59.543 43.478 19.81 19.81 0.00 2.69
3037 17231 4.104102 TGGTCTTCAACTGGTACCTTTGAT 59.896 41.667 22.64 4.34 0.00 2.57
3038 17232 5.070685 GGTCTTCAACTGGTACCTTTGATT 58.929 41.667 22.64 5.83 0.00 2.57
3039 17233 5.048713 GGTCTTCAACTGGTACCTTTGATTG 60.049 44.000 22.64 18.86 0.00 2.67
3040 17234 5.531287 GTCTTCAACTGGTACCTTTGATTGT 59.469 40.000 22.64 6.15 0.00 2.71
3041 17235 6.039382 GTCTTCAACTGGTACCTTTGATTGTT 59.961 38.462 22.64 10.54 0.00 2.83
3042 17236 7.227910 GTCTTCAACTGGTACCTTTGATTGTTA 59.772 37.037 22.64 11.65 0.00 2.41
3043 17237 7.942341 TCTTCAACTGGTACCTTTGATTGTTAT 59.058 33.333 22.64 0.00 0.00 1.89
3044 17238 8.472007 TTCAACTGGTACCTTTGATTGTTATT 57.528 30.769 22.64 0.00 0.00 1.40
3045 17239 7.881142 TCAACTGGTACCTTTGATTGTTATTG 58.119 34.615 19.81 7.69 0.00 1.90
3046 17240 7.504238 TCAACTGGTACCTTTGATTGTTATTGT 59.496 33.333 19.81 0.00 0.00 2.71
3047 17241 7.214467 ACTGGTACCTTTGATTGTTATTGTG 57.786 36.000 14.36 0.00 0.00 3.33
3048 17242 6.019779 TGGTACCTTTGATTGTTATTGTGC 57.980 37.500 14.36 0.00 0.00 4.57
3049 17243 5.092781 GGTACCTTTGATTGTTATTGTGCG 58.907 41.667 4.06 0.00 0.00 5.34
3050 17244 4.846779 ACCTTTGATTGTTATTGTGCGT 57.153 36.364 0.00 0.00 0.00 5.24
3051 17245 5.950758 ACCTTTGATTGTTATTGTGCGTA 57.049 34.783 0.00 0.00 0.00 4.42
3052 17246 6.509418 ACCTTTGATTGTTATTGTGCGTAT 57.491 33.333 0.00 0.00 0.00 3.06
3053 17247 6.321717 ACCTTTGATTGTTATTGTGCGTATG 58.678 36.000 0.00 0.00 0.00 2.39
3054 17248 5.743398 CCTTTGATTGTTATTGTGCGTATGG 59.257 40.000 0.00 0.00 0.00 2.74
3055 17249 6.404184 CCTTTGATTGTTATTGTGCGTATGGA 60.404 38.462 0.00 0.00 0.00 3.41
3056 17250 6.502136 TTGATTGTTATTGTGCGTATGGAA 57.498 33.333 0.00 0.00 0.00 3.53
3057 17251 6.117911 TGATTGTTATTGTGCGTATGGAAG 57.882 37.500 0.00 0.00 0.00 3.46
3058 17252 5.877564 TGATTGTTATTGTGCGTATGGAAGA 59.122 36.000 0.00 0.00 0.00 2.87
3059 17253 6.542005 TGATTGTTATTGTGCGTATGGAAGAT 59.458 34.615 0.00 0.00 0.00 2.40
3060 17254 5.733226 TGTTATTGTGCGTATGGAAGATG 57.267 39.130 0.00 0.00 0.00 2.90
3061 17255 5.182487 TGTTATTGTGCGTATGGAAGATGT 58.818 37.500 0.00 0.00 0.00 3.06
3062 17256 5.645929 TGTTATTGTGCGTATGGAAGATGTT 59.354 36.000 0.00 0.00 0.00 2.71
3063 17257 6.150307 TGTTATTGTGCGTATGGAAGATGTTT 59.850 34.615 0.00 0.00 0.00 2.83
3064 17258 7.334671 TGTTATTGTGCGTATGGAAGATGTTTA 59.665 33.333 0.00 0.00 0.00 2.01
3065 17259 6.751514 ATTGTGCGTATGGAAGATGTTTAA 57.248 33.333 0.00 0.00 0.00 1.52
3066 17260 6.561737 TTGTGCGTATGGAAGATGTTTAAA 57.438 33.333 0.00 0.00 0.00 1.52
3067 17261 6.561737 TGTGCGTATGGAAGATGTTTAAAA 57.438 33.333 0.00 0.00 0.00 1.52
3068 17262 6.375377 TGTGCGTATGGAAGATGTTTAAAAC 58.625 36.000 0.00 0.00 0.00 2.43
3069 17263 5.506832 GTGCGTATGGAAGATGTTTAAAACG 59.493 40.000 0.00 0.00 0.00 3.60
3070 17264 4.494410 GCGTATGGAAGATGTTTAAAACGC 59.506 41.667 9.94 9.94 43.94 4.84
3071 17265 5.623335 CGTATGGAAGATGTTTAAAACGCA 58.377 37.500 0.00 0.00 0.00 5.24
3072 17266 6.255215 CGTATGGAAGATGTTTAAAACGCAT 58.745 36.000 0.00 0.00 0.00 4.73
3073 17267 7.403421 CGTATGGAAGATGTTTAAAACGCATA 58.597 34.615 0.00 0.00 0.00 3.14
3074 17268 7.906010 CGTATGGAAGATGTTTAAAACGCATAA 59.094 33.333 0.00 0.00 0.00 1.90
3075 17269 9.006215 GTATGGAAGATGTTTAAAACGCATAAC 57.994 33.333 0.00 0.00 0.00 1.89
3076 17270 7.209471 TGGAAGATGTTTAAAACGCATAACT 57.791 32.000 0.00 0.00 0.00 2.24
3077 17271 7.081349 TGGAAGATGTTTAAAACGCATAACTG 58.919 34.615 0.00 0.00 0.00 3.16
3078 17272 6.033513 GGAAGATGTTTAAAACGCATAACTGC 59.966 38.462 0.00 0.00 45.31 4.40
3079 17273 6.254281 AGATGTTTAAAACGCATAACTGCT 57.746 33.333 0.00 0.00 46.65 4.24
3080 17274 6.677913 AGATGTTTAAAACGCATAACTGCTT 58.322 32.000 0.00 0.00 46.65 3.91
3081 17275 7.812648 AGATGTTTAAAACGCATAACTGCTTA 58.187 30.769 0.00 0.00 46.65 3.09
3082 17276 8.458843 AGATGTTTAAAACGCATAACTGCTTAT 58.541 29.630 0.00 0.00 46.65 1.73
3083 17277 9.710979 GATGTTTAAAACGCATAACTGCTTATA 57.289 29.630 0.00 0.00 46.65 0.98
3085 17279 9.497030 TGTTTAAAACGCATAACTGCTTATATG 57.503 29.630 0.00 0.00 46.65 1.78
3086 17280 9.498307 GTTTAAAACGCATAACTGCTTATATGT 57.502 29.630 0.00 0.00 46.65 2.29
3090 17284 8.601845 AAACGCATAACTGCTTATATGTATCA 57.398 30.769 0.00 0.00 46.65 2.15
3091 17285 8.777865 AACGCATAACTGCTTATATGTATCAT 57.222 30.769 0.00 0.00 46.65 2.45
3092 17286 8.777865 ACGCATAACTGCTTATATGTATCATT 57.222 30.769 0.00 0.00 46.65 2.57
3093 17287 8.659491 ACGCATAACTGCTTATATGTATCATTG 58.341 33.333 0.00 0.00 46.65 2.82
3094 17288 8.118607 CGCATAACTGCTTATATGTATCATTGG 58.881 37.037 0.00 0.00 46.65 3.16
3095 17289 8.950210 GCATAACTGCTTATATGTATCATTGGT 58.050 33.333 0.00 0.00 45.32 3.67
3098 17292 7.969536 ACTGCTTATATGTATCATTGGTGTC 57.030 36.000 0.00 0.00 0.00 3.67
3099 17293 7.508687 ACTGCTTATATGTATCATTGGTGTCA 58.491 34.615 0.00 0.00 0.00 3.58
3100 17294 8.159447 ACTGCTTATATGTATCATTGGTGTCAT 58.841 33.333 0.00 0.00 0.00 3.06
3101 17295 8.326680 TGCTTATATGTATCATTGGTGTCATG 57.673 34.615 0.00 0.00 0.00 3.07
3102 17296 7.391275 TGCTTATATGTATCATTGGTGTCATGG 59.609 37.037 0.00 0.00 0.00 3.66
3103 17297 7.391554 GCTTATATGTATCATTGGTGTCATGGT 59.608 37.037 0.00 0.00 0.00 3.55
3104 17298 8.846943 TTATATGTATCATTGGTGTCATGGTC 57.153 34.615 0.00 0.00 0.00 4.02
3105 17299 4.842531 TGTATCATTGGTGTCATGGTCT 57.157 40.909 0.00 0.00 0.00 3.85
3106 17300 5.178096 TGTATCATTGGTGTCATGGTCTT 57.822 39.130 0.00 0.00 0.00 3.01
3107 17301 5.569355 TGTATCATTGGTGTCATGGTCTTT 58.431 37.500 0.00 0.00 0.00 2.52
3108 17302 6.009589 TGTATCATTGGTGTCATGGTCTTTT 58.990 36.000 0.00 0.00 0.00 2.27
3109 17303 6.493115 TGTATCATTGGTGTCATGGTCTTTTT 59.507 34.615 0.00 0.00 0.00 1.94
3138 17332 1.105457 CGATGATTTGGCATGGTGGT 58.895 50.000 0.00 0.00 0.00 4.16
3139 17333 1.202325 CGATGATTTGGCATGGTGGTG 60.202 52.381 0.00 0.00 0.00 4.17
3141 17335 0.967662 TGATTTGGCATGGTGGTGTG 59.032 50.000 0.00 0.00 0.00 3.82
3146 17340 1.228245 GGCATGGTGGTGTGTGACT 60.228 57.895 0.00 0.00 0.00 3.41
3147 17341 1.237285 GGCATGGTGGTGTGTGACTC 61.237 60.000 0.00 0.00 0.00 3.36
3155 17349 1.133294 TGGTGTGTGACTCCCTGTAGA 60.133 52.381 0.00 0.00 31.02 2.59
3156 17350 2.180276 GGTGTGTGACTCCCTGTAGAT 58.820 52.381 0.00 0.00 0.00 1.98
3157 17351 2.567615 GGTGTGTGACTCCCTGTAGATT 59.432 50.000 0.00 0.00 0.00 2.40
3159 17353 3.997021 GTGTGTGACTCCCTGTAGATTTG 59.003 47.826 0.00 0.00 0.00 2.32
3160 17354 3.646162 TGTGTGACTCCCTGTAGATTTGT 59.354 43.478 0.00 0.00 0.00 2.83
3161 17355 4.102524 TGTGTGACTCCCTGTAGATTTGTT 59.897 41.667 0.00 0.00 0.00 2.83
3165 17359 7.227910 GTGTGACTCCCTGTAGATTTGTTTTTA 59.772 37.037 0.00 0.00 0.00 1.52
3166 17360 7.444183 TGTGACTCCCTGTAGATTTGTTTTTAG 59.556 37.037 0.00 0.00 0.00 1.85
3167 17361 6.430000 TGACTCCCTGTAGATTTGTTTTTAGC 59.570 38.462 0.00 0.00 0.00 3.09
3169 17363 6.431234 ACTCCCTGTAGATTTGTTTTTAGCTG 59.569 38.462 0.00 0.00 0.00 4.24
3170 17364 6.539173 TCCCTGTAGATTTGTTTTTAGCTGA 58.461 36.000 0.00 0.00 0.00 4.26
3171 17365 7.001674 TCCCTGTAGATTTGTTTTTAGCTGAA 58.998 34.615 0.00 0.00 0.00 3.02
3178 17386 6.476706 AGATTTGTTTTTAGCTGAAGTTGTGC 59.523 34.615 0.00 0.00 0.00 4.57
3181 17389 4.397730 TGTTTTTAGCTGAAGTTGTGCTGA 59.602 37.500 0.00 0.00 37.62 4.26
3182 17390 5.067674 TGTTTTTAGCTGAAGTTGTGCTGAT 59.932 36.000 0.00 0.00 37.62 2.90
3188 17396 1.881973 TGAAGTTGTGCTGATCCTTGC 59.118 47.619 0.00 0.00 0.00 4.01
3189 17397 0.877071 AAGTTGTGCTGATCCTTGCG 59.123 50.000 0.00 0.00 0.00 4.85
3195 17403 1.136147 GCTGATCCTTGCGCAGTTG 59.864 57.895 11.31 5.11 32.39 3.16
3210 17418 1.002468 CAGTTGTGCTGTTAGTGTGGC 60.002 52.381 0.00 0.00 40.27 5.01
3211 17419 1.134098 AGTTGTGCTGTTAGTGTGGCT 60.134 47.619 0.00 0.00 0.00 4.75
3212 17420 1.676006 GTTGTGCTGTTAGTGTGGCTT 59.324 47.619 0.00 0.00 0.00 4.35
3213 17421 1.308047 TGTGCTGTTAGTGTGGCTTG 58.692 50.000 0.00 0.00 0.00 4.01
3214 17422 1.134250 TGTGCTGTTAGTGTGGCTTGA 60.134 47.619 0.00 0.00 0.00 3.02
3217 17425 1.946768 GCTGTTAGTGTGGCTTGAACA 59.053 47.619 0.00 0.00 0.00 3.18
3218 17426 2.287009 GCTGTTAGTGTGGCTTGAACAC 60.287 50.000 0.00 0.00 46.70 3.32
3225 17433 3.713858 TGTGGCTTGAACACATTTCAG 57.286 42.857 0.00 0.00 43.35 3.02
3226 17434 2.223782 TGTGGCTTGAACACATTTCAGC 60.224 45.455 0.00 0.00 43.35 4.26
3237 17445 6.817641 TGAACACATTTCAGCAACTTTTTCAT 59.182 30.769 0.00 0.00 0.00 2.57
3239 17447 6.108015 ACACATTTCAGCAACTTTTTCATGT 58.892 32.000 0.00 0.00 0.00 3.21
3241 17449 7.927629 ACACATTTCAGCAACTTTTTCATGTAT 59.072 29.630 0.00 0.00 0.00 2.29
3242 17450 8.430063 CACATTTCAGCAACTTTTTCATGTATC 58.570 33.333 0.00 0.00 0.00 2.24
3243 17451 8.362639 ACATTTCAGCAACTTTTTCATGTATCT 58.637 29.630 0.00 0.00 0.00 1.98
3244 17452 9.844790 CATTTCAGCAACTTTTTCATGTATCTA 57.155 29.630 0.00 0.00 0.00 1.98
3248 17456 7.174772 TCAGCAACTTTTTCATGTATCTAGCAA 59.825 33.333 0.00 0.00 0.00 3.91
3249 17457 7.972277 CAGCAACTTTTTCATGTATCTAGCAAT 59.028 33.333 0.00 0.00 0.00 3.56
3278 17487 5.784750 TCTGTGAAAGCAATCATTAGACG 57.215 39.130 0.00 0.00 0.00 4.18
3283 17492 2.332063 AGCAATCATTAGACGGTGGG 57.668 50.000 0.00 0.00 0.00 4.61
3292 17501 0.528924 TAGACGGTGGGACATGTTCG 59.471 55.000 0.00 2.58 44.52 3.95
3297 17506 1.136305 CGGTGGGACATGTTCGTAGAT 59.864 52.381 0.00 0.00 44.52 1.98
3301 17510 5.365619 GGTGGGACATGTTCGTAGATAATT 58.634 41.667 0.00 0.00 44.52 1.40
3303 17512 6.987992 GGTGGGACATGTTCGTAGATAATTTA 59.012 38.462 0.00 0.00 44.52 1.40
3306 17515 9.621629 TGGGACATGTTCGTAGATAATTTATTT 57.378 29.630 0.00 0.00 35.04 1.40
3307 17516 9.878599 GGGACATGTTCGTAGATAATTTATTTG 57.121 33.333 0.00 0.00 35.04 2.32
3346 17557 9.928236 TTAATTGTCAAAATTTGTAAAAGCTGC 57.072 25.926 5.56 0.00 0.00 5.25
3347 17558 6.974932 TTGTCAAAATTTGTAAAAGCTGCA 57.025 29.167 5.56 0.00 0.00 4.41
3348 17559 6.974932 TGTCAAAATTTGTAAAAGCTGCAA 57.025 29.167 5.56 0.00 0.00 4.08
3349 17560 7.002816 TGTCAAAATTTGTAAAAGCTGCAAG 57.997 32.000 5.56 0.00 30.72 4.01
3350 17561 6.815641 TGTCAAAATTTGTAAAAGCTGCAAGA 59.184 30.769 5.56 0.00 34.07 3.02
3354 17565 7.790823 AAATTTGTAAAAGCTGCAAGAACAT 57.209 28.000 1.02 0.00 34.07 2.71
3355 17566 7.790823 AATTTGTAAAAGCTGCAAGAACATT 57.209 28.000 1.02 0.00 34.07 2.71
3358 17569 8.709386 TTTGTAAAAGCTGCAAGAACATTTTA 57.291 26.923 1.02 0.00 34.07 1.52
3360 17571 8.296799 TGTAAAAGCTGCAAGAACATTTTATG 57.703 30.769 1.02 0.00 34.07 1.90
3361 17572 6.790285 AAAAGCTGCAAGAACATTTTATGG 57.210 33.333 1.02 0.00 34.07 2.74
3418 17639 8.121305 ACAATTGTACAAGATATTTGCTGGAA 57.879 30.769 9.97 0.00 0.00 3.53
3419 17640 8.584157 ACAATTGTACAAGATATTTGCTGGAAA 58.416 29.630 9.97 0.00 0.00 3.13
3420 17641 9.421806 CAATTGTACAAGATATTTGCTGGAAAA 57.578 29.630 14.65 0.00 0.00 2.29
3421 17642 8.986477 ATTGTACAAGATATTTGCTGGAAAAC 57.014 30.769 14.65 0.00 0.00 2.43
3422 17643 7.759489 TGTACAAGATATTTGCTGGAAAACT 57.241 32.000 0.00 0.00 0.00 2.66
3423 17644 8.177119 TGTACAAGATATTTGCTGGAAAACTT 57.823 30.769 0.00 2.96 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 1.642037 CGACCTGCCATGCTTCACTG 61.642 60.000 0.00 0.00 0.00 3.66
35 36 1.376424 CGACCTGCCATGCTTCACT 60.376 57.895 0.00 0.00 0.00 3.41
36 37 3.044059 GCGACCTGCCATGCTTCAC 62.044 63.158 0.00 0.00 37.76 3.18
37 38 2.747460 GCGACCTGCCATGCTTCA 60.747 61.111 0.00 0.00 37.76 3.02
55 57 4.703575 CCATACATAGCTTCCCATGATTGG 59.296 45.833 0.00 0.00 43.23 3.16
58 60 5.396101 CGATCCATACATAGCTTCCCATGAT 60.396 44.000 0.00 0.00 0.00 2.45
59 61 4.081476 CGATCCATACATAGCTTCCCATGA 60.081 45.833 0.00 0.00 0.00 3.07
84 86 5.697178 TGTTGAGATTTGATTTGGCATTGTG 59.303 36.000 0.00 0.00 0.00 3.33
85 87 5.856156 TGTTGAGATTTGATTTGGCATTGT 58.144 33.333 0.00 0.00 0.00 2.71
110 112 4.161333 GTTCGATTGAAATGCTTCACTGG 58.839 43.478 0.00 0.00 41.34 4.00
156 163 0.039618 GACCCCTTGGATGCTTGGAA 59.960 55.000 0.00 0.00 34.81 3.53
157 164 1.139498 TGACCCCTTGGATGCTTGGA 61.139 55.000 0.00 0.00 34.81 3.53
159 166 1.108776 CATGACCCCTTGGATGCTTG 58.891 55.000 0.00 0.00 34.81 4.01
160 167 1.002069 TCATGACCCCTTGGATGCTT 58.998 50.000 0.00 0.00 34.81 3.91
161 168 0.549950 CTCATGACCCCTTGGATGCT 59.450 55.000 0.00 0.00 34.81 3.79
162 169 0.548031 TCTCATGACCCCTTGGATGC 59.452 55.000 0.00 0.00 34.81 3.91
165 172 1.274358 TGGATCTCATGACCCCTTGGA 60.274 52.381 0.00 0.00 34.81 3.53
226 247 2.378634 CCAGTCCCCAGATCCACCC 61.379 68.421 0.00 0.00 0.00 4.61
255 278 1.384643 GGCCAGGAGAGGTACCCAT 60.385 63.158 8.74 0.00 0.00 4.00
256 279 2.040606 GGCCAGGAGAGGTACCCA 59.959 66.667 8.74 0.00 0.00 4.51
258 281 3.155167 CCGGCCAGGAGAGGTACC 61.155 72.222 2.73 2.73 45.00 3.34
259 282 3.851128 GCCGGCCAGGAGAGGTAC 61.851 72.222 18.11 0.00 45.00 3.34
475 502 1.235696 GAGGGAGAGGGAGATGGCT 59.764 63.158 0.00 0.00 0.00 4.75
534 564 3.474570 CAAGGAGGGGAGGCCGAG 61.475 72.222 0.00 0.00 0.00 4.63
553 597 2.740055 AGCCAACGAGAAGCAGCG 60.740 61.111 0.00 0.00 0.00 5.18
560 604 1.609072 CGATCTATCCAGCCAACGAGA 59.391 52.381 0.00 0.00 0.00 4.04
690 749 2.616510 GCTTAGAGCACACACTCCCATT 60.617 50.000 0.00 0.00 41.89 3.16
692 751 0.321671 GCTTAGAGCACACACTCCCA 59.678 55.000 0.00 0.00 41.89 4.37
694 753 0.243907 TCGCTTAGAGCACACACTCC 59.756 55.000 0.50 0.00 42.58 3.85
705 764 4.143333 GCCACCCGCTCGCTTAGA 62.143 66.667 0.00 0.00 0.00 2.10
740 806 4.380945 GCCCAGGCCCATCCAACA 62.381 66.667 0.00 0.00 37.29 3.33
767 833 1.219522 GACCGTGTGAAGTGAACCGG 61.220 60.000 0.00 0.00 37.38 5.28
802 868 4.998051 ACTGGTTCTCTCTCTCTCTCTTT 58.002 43.478 0.00 0.00 0.00 2.52
803 869 4.042809 TGACTGGTTCTCTCTCTCTCTCTT 59.957 45.833 0.00 0.00 0.00 2.85
804 870 3.587061 TGACTGGTTCTCTCTCTCTCTCT 59.413 47.826 0.00 0.00 0.00 3.10
805 871 3.689649 GTGACTGGTTCTCTCTCTCTCTC 59.310 52.174 0.00 0.00 0.00 3.20
806 872 3.073798 TGTGACTGGTTCTCTCTCTCTCT 59.926 47.826 0.00 0.00 0.00 3.10
810 876 3.153919 GAGTGTGACTGGTTCTCTCTCT 58.846 50.000 0.00 0.00 36.26 3.10
811 877 2.230266 GGAGTGTGACTGGTTCTCTCTC 59.770 54.545 0.00 0.00 37.51 3.20
817 883 1.270358 GGAGTGGAGTGTGACTGGTTC 60.270 57.143 0.00 0.00 0.00 3.62
819 885 0.398522 TGGAGTGGAGTGTGACTGGT 60.399 55.000 0.00 0.00 0.00 4.00
820 886 0.034059 GTGGAGTGGAGTGTGACTGG 59.966 60.000 0.00 0.00 0.00 4.00
822 888 1.043816 CAGTGGAGTGGAGTGTGACT 58.956 55.000 0.00 0.00 0.00 3.41
825 891 0.319040 CGTCAGTGGAGTGGAGTGTG 60.319 60.000 0.00 0.00 0.00 3.82
1071 1164 0.605589 CAGAGATCATAGGCGTCCCC 59.394 60.000 0.00 0.00 0.00 4.81
1175 1285 1.574428 GCAATGCGTCGAACACCTT 59.426 52.632 0.00 0.00 0.00 3.50
1246 1361 3.263937 CCAACCATCCATTCCAACCAAAT 59.736 43.478 0.00 0.00 0.00 2.32
1262 1377 1.546773 CCTTTCATCGAACCCCAACCA 60.547 52.381 0.00 0.00 0.00 3.67
1263 1378 1.173913 CCTTTCATCGAACCCCAACC 58.826 55.000 0.00 0.00 0.00 3.77
1264 1379 1.173913 CCCTTTCATCGAACCCCAAC 58.826 55.000 0.00 0.00 0.00 3.77
1269 1384 0.804989 CACTGCCCTTTCATCGAACC 59.195 55.000 0.00 0.00 0.00 3.62
1290 1405 1.875813 CATCAGCGAGACAGCGACC 60.876 63.158 0.00 0.00 43.00 4.79
1291 1406 1.875813 CCATCAGCGAGACAGCGAC 60.876 63.158 0.00 0.00 43.00 5.19
1292 1407 2.343426 ACCATCAGCGAGACAGCGA 61.343 57.895 0.00 0.00 43.00 4.93
1293 1408 2.163390 CACCATCAGCGAGACAGCG 61.163 63.158 0.00 0.00 43.00 5.18
1295 1410 0.799917 CGACACCATCAGCGAGACAG 60.800 60.000 0.00 0.00 0.00 3.51
1299 1414 0.716108 GAAACGACACCATCAGCGAG 59.284 55.000 0.00 0.00 0.00 5.03
1538 4075 1.549170 CGGTAGGCTGTAGAAGGTGTT 59.451 52.381 0.00 0.00 0.00 3.32
1539 4076 1.183549 CGGTAGGCTGTAGAAGGTGT 58.816 55.000 0.00 0.00 0.00 4.16
1721 6016 0.717224 CATTTGGCGACTGCATTTGC 59.283 50.000 7.74 7.74 45.35 3.68
1756 6051 0.732571 AAGGTGCCGCATATTTCACG 59.267 50.000 0.00 0.00 0.00 4.35
1770 6065 3.872696 TGCATCCATGTAGTGTAAGGTG 58.127 45.455 0.00 0.00 0.00 4.00
1771 6066 4.778213 ATGCATCCATGTAGTGTAAGGT 57.222 40.909 0.00 0.00 0.00 3.50
1834 6130 0.729116 CAACGAGATTTGGCGAGCAT 59.271 50.000 0.00 0.00 0.00 3.79
2047 6343 2.427245 AATCCGAGAGACCTGCGGG 61.427 63.158 11.02 11.02 44.87 6.13
2093 6389 6.580788 TGTTGTCATTGAACACAATTGGATT 58.419 32.000 10.83 3.17 35.05 3.01
2146 10086 4.740822 AACGCCCCATGCCACTCC 62.741 66.667 0.00 0.00 36.24 3.85
2183 10123 1.524008 GCAGGTACCTGGCACCAAAC 61.524 60.000 36.91 17.99 43.77 2.93
2230 10170 1.275856 ACCTCAAAGCTGCTCTCTCTG 59.724 52.381 1.00 0.00 0.00 3.35
2231 10171 1.643310 ACCTCAAAGCTGCTCTCTCT 58.357 50.000 1.00 0.00 0.00 3.10
2235 10175 3.290710 TCAAAAACCTCAAAGCTGCTCT 58.709 40.909 1.00 0.00 0.00 4.09
2240 10180 2.363359 CAGCCTCAAAAACCTCAAAGCT 59.637 45.455 0.00 0.00 0.00 3.74
2242 10182 3.633986 AGTCAGCCTCAAAAACCTCAAAG 59.366 43.478 0.00 0.00 0.00 2.77
2254 10194 2.224597 TGAATGCTCAAAGTCAGCCTCA 60.225 45.455 0.00 0.00 35.89 3.86
2255 10195 2.161211 GTGAATGCTCAAAGTCAGCCTC 59.839 50.000 0.00 0.00 35.89 4.70
2285 10225 2.359975 CCCCAAAGCCGACACCTC 60.360 66.667 0.00 0.00 0.00 3.85
2304 10244 3.127030 CCTTCGCCCTAGAAACATCAAAC 59.873 47.826 0.00 0.00 0.00 2.93
2306 10246 2.304761 ACCTTCGCCCTAGAAACATCAA 59.695 45.455 0.00 0.00 0.00 2.57
2309 10255 1.679032 GCACCTTCGCCCTAGAAACAT 60.679 52.381 0.00 0.00 0.00 2.71
2334 10280 3.644966 AGTGAGACAAGGACAAAACCA 57.355 42.857 0.00 0.00 0.00 3.67
2337 10283 4.349636 TCCCATAGTGAGACAAGGACAAAA 59.650 41.667 0.00 0.00 0.00 2.44
2353 15126 0.905357 GACCATCGGGGATCCCATAG 59.095 60.000 32.07 21.43 45.83 2.23
2367 15140 6.012113 TCATCCAAGAAAAAGATGTGACCAT 58.988 36.000 0.00 0.00 38.79 3.55
2370 15143 7.149569 TCATCATCCAAGAAAAAGATGTGAC 57.850 36.000 0.00 0.00 38.79 3.67
2380 15153 5.963214 TCTCCTCATCATCATCCAAGAAA 57.037 39.130 0.00 0.00 0.00 2.52
2406 15179 4.384098 CCTTGTCATAGCCATACTCCACAA 60.384 45.833 0.00 0.00 0.00 3.33
2408 15181 3.388024 TCCTTGTCATAGCCATACTCCAC 59.612 47.826 0.00 0.00 0.00 4.02
2457 15230 2.752354 CAGAACGGACTCTGTCAGATCT 59.248 50.000 2.22 0.00 39.44 2.75
2468 15243 2.248248 TCTGGATGAACAGAACGGACT 58.752 47.619 0.00 0.00 44.03 3.85
2540 16475 2.125350 CCTCCGCTTCAGTCCTGC 60.125 66.667 0.00 0.00 0.00 4.85
2554 16489 6.260271 GCATAGGGATAACAGTTTAACACCTC 59.740 42.308 0.00 0.00 0.00 3.85
2563 16498 4.139786 CAGCATGCATAGGGATAACAGTT 58.860 43.478 21.98 0.00 0.00 3.16
2581 16523 1.908619 TCAGATAACCCAGAAGCAGCA 59.091 47.619 0.00 0.00 0.00 4.41
2588 16530 0.535335 GCACGGTCAGATAACCCAGA 59.465 55.000 0.00 0.00 35.79 3.86
2590 16535 1.195442 TGGCACGGTCAGATAACCCA 61.195 55.000 0.00 0.00 35.79 4.51
2591 16536 0.180406 ATGGCACGGTCAGATAACCC 59.820 55.000 0.00 0.00 35.79 4.11
2608 16553 3.565482 ACCACTGAACAACAACAGCTATG 59.435 43.478 0.00 0.00 37.61 2.23
2613 16637 4.701956 AGAAACCACTGAACAACAACAG 57.298 40.909 0.00 0.00 39.65 3.16
2656 16680 4.082190 CCATACATACCACGGTCAGATAGG 60.082 50.000 0.00 0.00 0.00 2.57
2735 16927 7.906199 ACAGAGTAACCTAGCTCAGATAAAT 57.094 36.000 0.00 0.00 34.39 1.40
2738 16930 8.053963 ACTTAACAGAGTAACCTAGCTCAGATA 58.946 37.037 0.00 0.00 34.39 1.98
2739 16931 6.893005 ACTTAACAGAGTAACCTAGCTCAGAT 59.107 38.462 0.00 0.00 34.39 2.90
2740 16932 6.151312 CACTTAACAGAGTAACCTAGCTCAGA 59.849 42.308 0.00 0.00 34.39 3.27
2741 16933 6.326375 CACTTAACAGAGTAACCTAGCTCAG 58.674 44.000 0.00 0.00 34.39 3.35
2742 16934 5.336531 GCACTTAACAGAGTAACCTAGCTCA 60.337 44.000 0.00 0.00 34.39 4.26
2743 16935 5.103687 GCACTTAACAGAGTAACCTAGCTC 58.896 45.833 0.00 0.00 0.00 4.09
2745 16937 3.858238 CGCACTTAACAGAGTAACCTAGC 59.142 47.826 0.00 0.00 0.00 3.42
2746 16938 4.857588 CACGCACTTAACAGAGTAACCTAG 59.142 45.833 0.00 0.00 0.00 3.02
2754 16947 7.249147 AGTACTAATACACGCACTTAACAGAG 58.751 38.462 0.00 0.00 33.30 3.35
2762 16955 5.182570 TCAGACAAGTACTAATACACGCACT 59.817 40.000 0.00 0.00 33.30 4.40
2763 16956 5.396484 TCAGACAAGTACTAATACACGCAC 58.604 41.667 0.00 0.00 33.30 5.34
2778 16972 6.147821 CCACCACAATTACTAGTTCAGACAAG 59.852 42.308 0.00 0.00 0.00 3.16
2781 16975 5.548406 ACCACCACAATTACTAGTTCAGAC 58.452 41.667 0.00 0.00 0.00 3.51
2791 16985 5.574891 TGCATATCAACCACCACAATTAC 57.425 39.130 0.00 0.00 0.00 1.89
2793 16987 4.621274 GCTTGCATATCAACCACCACAATT 60.621 41.667 0.00 0.00 0.00 2.32
2796 16990 1.818060 GCTTGCATATCAACCACCACA 59.182 47.619 0.00 0.00 0.00 4.17
2802 16996 3.441572 AGTCAACAGCTTGCATATCAACC 59.558 43.478 0.00 0.00 0.00 3.77
2803 16997 4.083110 ACAGTCAACAGCTTGCATATCAAC 60.083 41.667 0.00 0.00 0.00 3.18
2804 16998 4.074259 ACAGTCAACAGCTTGCATATCAA 58.926 39.130 0.00 0.00 0.00 2.57
2805 16999 3.437741 CACAGTCAACAGCTTGCATATCA 59.562 43.478 0.00 0.00 0.00 2.15
2806 17000 3.438087 ACACAGTCAACAGCTTGCATATC 59.562 43.478 0.00 0.00 0.00 1.63
2807 17001 3.415212 ACACAGTCAACAGCTTGCATAT 58.585 40.909 0.00 0.00 0.00 1.78
2832 17026 4.337145 ACAACCACAGTACCAGTTGAAAA 58.663 39.130 16.99 0.00 41.65 2.29
2847 17041 0.821711 TAGGCACAGGCAACAACCAC 60.822 55.000 0.00 0.00 43.71 4.16
2849 17043 1.852067 CGTAGGCACAGGCAACAACC 61.852 60.000 0.00 0.00 43.71 3.77
2850 17044 0.882927 TCGTAGGCACAGGCAACAAC 60.883 55.000 0.00 0.00 43.71 3.32
2853 17047 0.948678 TTTTCGTAGGCACAGGCAAC 59.051 50.000 0.00 0.00 43.71 4.17
2854 17048 1.681538 TTTTTCGTAGGCACAGGCAA 58.318 45.000 0.00 0.00 43.71 4.52
2855 17049 3.405689 TTTTTCGTAGGCACAGGCA 57.594 47.368 0.00 0.00 43.71 4.75
2870 17064 9.822185 AGAAGAAGTTATGCATTTTGAGTTTTT 57.178 25.926 3.54 0.41 0.00 1.94
2871 17065 9.468532 GAGAAGAAGTTATGCATTTTGAGTTTT 57.531 29.630 3.54 0.00 0.00 2.43
2872 17066 8.854117 AGAGAAGAAGTTATGCATTTTGAGTTT 58.146 29.630 3.54 0.00 0.00 2.66
2873 17067 8.295288 CAGAGAAGAAGTTATGCATTTTGAGTT 58.705 33.333 3.54 0.00 0.00 3.01
2874 17068 7.446625 ACAGAGAAGAAGTTATGCATTTTGAGT 59.553 33.333 3.54 0.00 0.00 3.41
2875 17069 7.814642 ACAGAGAAGAAGTTATGCATTTTGAG 58.185 34.615 3.54 0.00 0.00 3.02
2876 17070 7.750229 ACAGAGAAGAAGTTATGCATTTTGA 57.250 32.000 3.54 0.00 0.00 2.69
2877 17071 9.713740 GATACAGAGAAGAAGTTATGCATTTTG 57.286 33.333 3.54 0.00 0.00 2.44
2878 17072 9.678260 AGATACAGAGAAGAAGTTATGCATTTT 57.322 29.630 3.54 0.00 0.00 1.82
2879 17073 9.678260 AAGATACAGAGAAGAAGTTATGCATTT 57.322 29.630 3.54 0.00 0.00 2.32
2880 17074 9.678260 AAAGATACAGAGAAGAAGTTATGCATT 57.322 29.630 3.54 0.00 0.00 3.56
2881 17075 9.107177 CAAAGATACAGAGAAGAAGTTATGCAT 57.893 33.333 3.79 3.79 0.00 3.96
2882 17076 8.314021 TCAAAGATACAGAGAAGAAGTTATGCA 58.686 33.333 0.00 0.00 0.00 3.96
2883 17077 8.599774 GTCAAAGATACAGAGAAGAAGTTATGC 58.400 37.037 0.00 0.00 0.00 3.14
2884 17078 9.645059 TGTCAAAGATACAGAGAAGAAGTTATG 57.355 33.333 0.00 0.00 0.00 1.90
2886 17080 9.645059 CATGTCAAAGATACAGAGAAGAAGTTA 57.355 33.333 0.00 0.00 0.00 2.24
2887 17081 7.605691 CCATGTCAAAGATACAGAGAAGAAGTT 59.394 37.037 0.00 0.00 0.00 2.66
2888 17082 7.102346 CCATGTCAAAGATACAGAGAAGAAGT 58.898 38.462 0.00 0.00 0.00 3.01
2889 17083 7.064371 CACCATGTCAAAGATACAGAGAAGAAG 59.936 40.741 0.00 0.00 0.00 2.85
2890 17084 6.875726 CACCATGTCAAAGATACAGAGAAGAA 59.124 38.462 0.00 0.00 0.00 2.52
2891 17085 6.401394 CACCATGTCAAAGATACAGAGAAGA 58.599 40.000 0.00 0.00 0.00 2.87
2892 17086 5.583854 CCACCATGTCAAAGATACAGAGAAG 59.416 44.000 0.00 0.00 0.00 2.85
2893 17087 5.013079 ACCACCATGTCAAAGATACAGAGAA 59.987 40.000 0.00 0.00 0.00 2.87
2894 17088 4.532126 ACCACCATGTCAAAGATACAGAGA 59.468 41.667 0.00 0.00 0.00 3.10
2895 17089 4.836825 ACCACCATGTCAAAGATACAGAG 58.163 43.478 0.00 0.00 0.00 3.35
2896 17090 4.532126 AGACCACCATGTCAAAGATACAGA 59.468 41.667 0.00 0.00 37.73 3.41
2897 17091 4.836825 AGACCACCATGTCAAAGATACAG 58.163 43.478 0.00 0.00 37.73 2.74
2898 17092 4.532126 AGAGACCACCATGTCAAAGATACA 59.468 41.667 0.00 0.00 37.73 2.29
2899 17093 5.091261 AGAGACCACCATGTCAAAGATAC 57.909 43.478 0.00 0.00 37.73 2.24
2900 17094 5.762179 AAGAGACCACCATGTCAAAGATA 57.238 39.130 0.00 0.00 37.73 1.98
2901 17095 4.647564 AAGAGACCACCATGTCAAAGAT 57.352 40.909 0.00 0.00 37.73 2.40
2902 17096 4.437682 AAAGAGACCACCATGTCAAAGA 57.562 40.909 0.00 0.00 37.73 2.52
2903 17097 6.656693 AGATAAAAGAGACCACCATGTCAAAG 59.343 38.462 0.00 0.00 37.73 2.77
2904 17098 6.430925 CAGATAAAAGAGACCACCATGTCAAA 59.569 38.462 0.00 0.00 37.73 2.69
2905 17099 5.939883 CAGATAAAAGAGACCACCATGTCAA 59.060 40.000 0.00 0.00 37.73 3.18
2906 17100 5.248248 TCAGATAAAAGAGACCACCATGTCA 59.752 40.000 0.00 0.00 37.73 3.58
2907 17101 5.734720 TCAGATAAAAGAGACCACCATGTC 58.265 41.667 0.00 0.00 35.43 3.06
2908 17102 5.762179 TCAGATAAAAGAGACCACCATGT 57.238 39.130 0.00 0.00 0.00 3.21
2909 17103 6.176183 AGTTCAGATAAAAGAGACCACCATG 58.824 40.000 0.00 0.00 0.00 3.66
2910 17104 6.380079 AGTTCAGATAAAAGAGACCACCAT 57.620 37.500 0.00 0.00 0.00 3.55
2911 17105 5.825593 AGTTCAGATAAAAGAGACCACCA 57.174 39.130 0.00 0.00 0.00 4.17
2912 17106 6.070710 ACCTAGTTCAGATAAAAGAGACCACC 60.071 42.308 0.00 0.00 0.00 4.61
2913 17107 6.937392 ACCTAGTTCAGATAAAAGAGACCAC 58.063 40.000 0.00 0.00 0.00 4.16
2914 17108 7.554959 AACCTAGTTCAGATAAAAGAGACCA 57.445 36.000 0.00 0.00 0.00 4.02
2915 17109 8.751242 AGTAACCTAGTTCAGATAAAAGAGACC 58.249 37.037 0.00 0.00 0.00 3.85
2916 17110 9.791820 GAGTAACCTAGTTCAGATAAAAGAGAC 57.208 37.037 0.00 0.00 0.00 3.36
2917 17111 9.756571 AGAGTAACCTAGTTCAGATAAAAGAGA 57.243 33.333 0.00 0.00 0.00 3.10
2918 17112 9.796120 CAGAGTAACCTAGTTCAGATAAAAGAG 57.204 37.037 0.00 0.00 0.00 2.85
2919 17113 9.310449 ACAGAGTAACCTAGTTCAGATAAAAGA 57.690 33.333 0.00 0.00 0.00 2.52
2944 17138 9.786105 GAGTACCAGAATAAGACTGTAACTAAC 57.214 37.037 0.00 0.00 32.57 2.34
2947 17141 7.889073 TCAGAGTACCAGAATAAGACTGTAACT 59.111 37.037 0.00 0.00 33.96 2.24
2948 17142 8.053026 TCAGAGTACCAGAATAAGACTGTAAC 57.947 38.462 0.00 0.00 34.04 2.50
2949 17143 8.521176 GTTCAGAGTACCAGAATAAGACTGTAA 58.479 37.037 0.00 0.00 34.04 2.41
2951 17145 6.722129 AGTTCAGAGTACCAGAATAAGACTGT 59.278 38.462 0.00 0.00 34.04 3.55
2953 17147 8.880991 TTAGTTCAGAGTACCAGAATAAGACT 57.119 34.615 0.00 0.00 0.00 3.24
2959 17153 9.838339 CCATAAATTAGTTCAGAGTACCAGAAT 57.162 33.333 0.00 0.00 0.00 2.40
2962 17156 7.435488 CGACCATAAATTAGTTCAGAGTACCAG 59.565 40.741 0.00 0.00 0.00 4.00
2963 17157 7.093640 ACGACCATAAATTAGTTCAGAGTACCA 60.094 37.037 0.00 0.00 0.00 3.25
2964 17158 7.263496 ACGACCATAAATTAGTTCAGAGTACC 58.737 38.462 0.00 0.00 0.00 3.34
2965 17159 8.699283 AACGACCATAAATTAGTTCAGAGTAC 57.301 34.615 0.00 0.00 0.00 2.73
2967 17161 9.886132 ATTAACGACCATAAATTAGTTCAGAGT 57.114 29.630 0.00 0.00 0.00 3.24
2969 17163 9.661563 ACATTAACGACCATAAATTAGTTCAGA 57.338 29.630 0.00 0.00 0.00 3.27
2970 17164 9.702726 CACATTAACGACCATAAATTAGTTCAG 57.297 33.333 0.00 0.00 0.00 3.02
2971 17165 8.178964 GCACATTAACGACCATAAATTAGTTCA 58.821 33.333 0.00 0.00 0.00 3.18
2972 17166 8.178964 TGCACATTAACGACCATAAATTAGTTC 58.821 33.333 0.00 0.00 0.00 3.01
2973 17167 8.046294 TGCACATTAACGACCATAAATTAGTT 57.954 30.769 0.00 0.00 0.00 2.24
2974 17168 7.618502 TGCACATTAACGACCATAAATTAGT 57.381 32.000 0.00 0.00 0.00 2.24
2975 17169 7.165812 GCTTGCACATTAACGACCATAAATTAG 59.834 37.037 0.00 0.00 0.00 1.73
2976 17170 6.970043 GCTTGCACATTAACGACCATAAATTA 59.030 34.615 0.00 0.00 0.00 1.40
2977 17171 5.804979 GCTTGCACATTAACGACCATAAATT 59.195 36.000 0.00 0.00 0.00 1.82
2978 17172 5.125417 AGCTTGCACATTAACGACCATAAAT 59.875 36.000 0.00 0.00 0.00 1.40
2979 17173 4.457603 AGCTTGCACATTAACGACCATAAA 59.542 37.500 0.00 0.00 0.00 1.40
2980 17174 4.006989 AGCTTGCACATTAACGACCATAA 58.993 39.130 0.00 0.00 0.00 1.90
2981 17175 3.373748 CAGCTTGCACATTAACGACCATA 59.626 43.478 0.00 0.00 0.00 2.74
2982 17176 2.162208 CAGCTTGCACATTAACGACCAT 59.838 45.455 0.00 0.00 0.00 3.55
2983 17177 1.535028 CAGCTTGCACATTAACGACCA 59.465 47.619 0.00 0.00 0.00 4.02
2984 17178 1.535462 ACAGCTTGCACATTAACGACC 59.465 47.619 0.00 0.00 0.00 4.79
2985 17179 2.969443 ACAGCTTGCACATTAACGAC 57.031 45.000 0.00 0.00 0.00 4.34
2986 17180 4.513692 AGTTAACAGCTTGCACATTAACGA 59.486 37.500 8.61 0.00 39.57 3.85
2987 17181 4.612614 CAGTTAACAGCTTGCACATTAACG 59.387 41.667 8.61 0.00 39.57 3.18
2988 17182 4.382754 GCAGTTAACAGCTTGCACATTAAC 59.617 41.667 15.09 13.55 36.45 2.01
2989 17183 4.037327 TGCAGTTAACAGCTTGCACATTAA 59.963 37.500 21.64 0.00 0.00 1.40
2990 17184 3.567585 TGCAGTTAACAGCTTGCACATTA 59.432 39.130 21.64 0.00 0.00 1.90
2991 17185 2.361757 TGCAGTTAACAGCTTGCACATT 59.638 40.909 21.64 0.00 0.00 2.71
2992 17186 1.955778 TGCAGTTAACAGCTTGCACAT 59.044 42.857 21.64 0.00 0.00 3.21
2993 17187 1.387539 TGCAGTTAACAGCTTGCACA 58.612 45.000 21.64 0.00 0.00 4.57
2994 17188 2.712057 ATGCAGTTAACAGCTTGCAC 57.288 45.000 21.64 0.00 35.03 4.57
2995 17189 2.288334 CCAATGCAGTTAACAGCTTGCA 60.288 45.455 21.64 20.22 36.69 4.08
2996 17190 2.288395 ACCAATGCAGTTAACAGCTTGC 60.288 45.455 21.64 15.69 0.00 4.01
2997 17191 3.254166 AGACCAATGCAGTTAACAGCTTG 59.746 43.478 21.64 20.08 0.00 4.01
2998 17192 3.490348 AGACCAATGCAGTTAACAGCTT 58.510 40.909 21.64 13.90 0.00 3.74
2999 17193 3.146104 AGACCAATGCAGTTAACAGCT 57.854 42.857 21.64 6.80 0.00 4.24
3000 17194 3.253188 TGAAGACCAATGCAGTTAACAGC 59.747 43.478 15.46 15.46 0.00 4.40
3001 17195 5.009010 AGTTGAAGACCAATGCAGTTAACAG 59.991 40.000 8.61 0.17 37.08 3.16
3002 17196 4.887071 AGTTGAAGACCAATGCAGTTAACA 59.113 37.500 8.61 0.00 37.08 2.41
3003 17197 5.215160 CAGTTGAAGACCAATGCAGTTAAC 58.785 41.667 0.00 0.00 37.08 2.01
3004 17198 4.278170 CCAGTTGAAGACCAATGCAGTTAA 59.722 41.667 0.00 0.00 37.08 2.01
3005 17199 3.820467 CCAGTTGAAGACCAATGCAGTTA 59.180 43.478 0.00 0.00 37.08 2.24
3006 17200 2.624838 CCAGTTGAAGACCAATGCAGTT 59.375 45.455 0.00 0.00 37.08 3.16
3007 17201 2.233271 CCAGTTGAAGACCAATGCAGT 58.767 47.619 0.00 0.00 37.08 4.40
3008 17202 2.233271 ACCAGTTGAAGACCAATGCAG 58.767 47.619 0.00 0.00 37.08 4.41
3009 17203 2.363306 ACCAGTTGAAGACCAATGCA 57.637 45.000 0.00 0.00 37.08 3.96
3010 17204 2.488153 GGTACCAGTTGAAGACCAATGC 59.512 50.000 7.15 0.00 37.08 3.56
3011 17205 4.021102 AGGTACCAGTTGAAGACCAATG 57.979 45.455 15.94 0.00 37.08 2.82
3012 17206 4.724279 AAGGTACCAGTTGAAGACCAAT 57.276 40.909 15.94 0.00 37.08 3.16
3013 17207 4.080243 TCAAAGGTACCAGTTGAAGACCAA 60.080 41.667 22.24 4.69 32.28 3.67
3014 17208 3.456644 TCAAAGGTACCAGTTGAAGACCA 59.543 43.478 22.24 5.26 32.28 4.02
3015 17209 4.081322 TCAAAGGTACCAGTTGAAGACC 57.919 45.455 22.24 0.00 0.00 3.85
3016 17210 5.531287 ACAATCAAAGGTACCAGTTGAAGAC 59.469 40.000 26.01 0.00 35.07 3.01
3017 17211 5.690865 ACAATCAAAGGTACCAGTTGAAGA 58.309 37.500 26.01 11.16 35.07 2.87
3018 17212 6.391227 AACAATCAAAGGTACCAGTTGAAG 57.609 37.500 26.01 22.99 35.07 3.02
3019 17213 8.356657 CAATAACAATCAAAGGTACCAGTTGAA 58.643 33.333 26.01 14.87 35.07 2.69
3020 17214 7.504238 ACAATAACAATCAAAGGTACCAGTTGA 59.496 33.333 25.02 25.02 35.83 3.18
3021 17215 7.594758 CACAATAACAATCAAAGGTACCAGTTG 59.405 37.037 15.94 17.19 0.00 3.16
3022 17216 7.657336 CACAATAACAATCAAAGGTACCAGTT 58.343 34.615 15.94 4.73 0.00 3.16
3023 17217 6.294508 GCACAATAACAATCAAAGGTACCAGT 60.295 38.462 15.94 0.00 0.00 4.00
3024 17218 6.092748 GCACAATAACAATCAAAGGTACCAG 58.907 40.000 15.94 3.52 0.00 4.00
3025 17219 5.335269 CGCACAATAACAATCAAAGGTACCA 60.335 40.000 15.94 0.00 0.00 3.25
3026 17220 5.092781 CGCACAATAACAATCAAAGGTACC 58.907 41.667 2.73 2.73 0.00 3.34
3027 17221 5.695818 ACGCACAATAACAATCAAAGGTAC 58.304 37.500 0.00 0.00 0.00 3.34
3028 17222 5.950758 ACGCACAATAACAATCAAAGGTA 57.049 34.783 0.00 0.00 0.00 3.08
3029 17223 4.846779 ACGCACAATAACAATCAAAGGT 57.153 36.364 0.00 0.00 0.00 3.50
3030 17224 5.743398 CCATACGCACAATAACAATCAAAGG 59.257 40.000 0.00 0.00 0.00 3.11
3031 17225 6.550843 TCCATACGCACAATAACAATCAAAG 58.449 36.000 0.00 0.00 0.00 2.77
3032 17226 6.502136 TCCATACGCACAATAACAATCAAA 57.498 33.333 0.00 0.00 0.00 2.69
3033 17227 6.372937 TCTTCCATACGCACAATAACAATCAA 59.627 34.615 0.00 0.00 0.00 2.57
3034 17228 5.877564 TCTTCCATACGCACAATAACAATCA 59.122 36.000 0.00 0.00 0.00 2.57
3035 17229 6.358118 TCTTCCATACGCACAATAACAATC 57.642 37.500 0.00 0.00 0.00 2.67
3036 17230 6.318648 ACATCTTCCATACGCACAATAACAAT 59.681 34.615 0.00 0.00 0.00 2.71
3037 17231 5.645929 ACATCTTCCATACGCACAATAACAA 59.354 36.000 0.00 0.00 0.00 2.83
3038 17232 5.182487 ACATCTTCCATACGCACAATAACA 58.818 37.500 0.00 0.00 0.00 2.41
3039 17233 5.734855 ACATCTTCCATACGCACAATAAC 57.265 39.130 0.00 0.00 0.00 1.89
3040 17234 6.751514 AAACATCTTCCATACGCACAATAA 57.248 33.333 0.00 0.00 0.00 1.40
3041 17235 7.851387 TTAAACATCTTCCATACGCACAATA 57.149 32.000 0.00 0.00 0.00 1.90
3042 17236 6.751514 TTAAACATCTTCCATACGCACAAT 57.248 33.333 0.00 0.00 0.00 2.71
3043 17237 6.561737 TTTAAACATCTTCCATACGCACAA 57.438 33.333 0.00 0.00 0.00 3.33
3044 17238 6.375377 GTTTTAAACATCTTCCATACGCACA 58.625 36.000 2.62 0.00 0.00 4.57
3045 17239 5.506832 CGTTTTAAACATCTTCCATACGCAC 59.493 40.000 8.61 0.00 0.00 5.34
3046 17240 5.623335 CGTTTTAAACATCTTCCATACGCA 58.377 37.500 8.61 0.00 0.00 5.24
3047 17241 4.494410 GCGTTTTAAACATCTTCCATACGC 59.506 41.667 8.61 9.94 42.71 4.42
3048 17242 5.623335 TGCGTTTTAAACATCTTCCATACG 58.377 37.500 8.61 0.00 0.00 3.06
3049 17243 9.006215 GTTATGCGTTTTAAACATCTTCCATAC 57.994 33.333 8.61 0.00 0.00 2.39
3050 17244 8.952278 AGTTATGCGTTTTAAACATCTTCCATA 58.048 29.630 8.61 2.63 0.00 2.74
3051 17245 7.754924 CAGTTATGCGTTTTAAACATCTTCCAT 59.245 33.333 8.61 3.42 0.00 3.41
3052 17246 7.081349 CAGTTATGCGTTTTAAACATCTTCCA 58.919 34.615 8.61 0.00 0.00 3.53
3053 17247 6.033513 GCAGTTATGCGTTTTAAACATCTTCC 59.966 38.462 8.61 0.00 43.87 3.46
3054 17248 6.967498 GCAGTTATGCGTTTTAAACATCTTC 58.033 36.000 8.61 0.00 43.87 2.87
3055 17249 6.927933 GCAGTTATGCGTTTTAAACATCTT 57.072 33.333 8.61 0.83 43.87 2.40
3072 17266 9.489084 GACACCAATGATACATATAAGCAGTTA 57.511 33.333 0.00 0.00 0.00 2.24
3073 17267 7.992608 TGACACCAATGATACATATAAGCAGTT 59.007 33.333 0.00 0.00 0.00 3.16
3074 17268 7.508687 TGACACCAATGATACATATAAGCAGT 58.491 34.615 0.00 0.00 0.00 4.40
3075 17269 7.967890 TGACACCAATGATACATATAAGCAG 57.032 36.000 0.00 0.00 0.00 4.24
3076 17270 7.391275 CCATGACACCAATGATACATATAAGCA 59.609 37.037 0.00 0.00 0.00 3.91
3077 17271 7.391554 ACCATGACACCAATGATACATATAAGC 59.608 37.037 0.00 0.00 0.00 3.09
3078 17272 8.853077 ACCATGACACCAATGATACATATAAG 57.147 34.615 0.00 0.00 0.00 1.73
3079 17273 8.659527 AGACCATGACACCAATGATACATATAA 58.340 33.333 0.00 0.00 0.00 0.98
3080 17274 8.206126 AGACCATGACACCAATGATACATATA 57.794 34.615 0.00 0.00 0.00 0.86
3081 17275 7.083062 AGACCATGACACCAATGATACATAT 57.917 36.000 0.00 0.00 0.00 1.78
3082 17276 6.499106 AGACCATGACACCAATGATACATA 57.501 37.500 0.00 0.00 0.00 2.29
3083 17277 5.378230 AGACCATGACACCAATGATACAT 57.622 39.130 0.00 0.00 0.00 2.29
3084 17278 4.842531 AGACCATGACACCAATGATACA 57.157 40.909 0.00 0.00 0.00 2.29
3085 17279 6.515272 AAAAGACCATGACACCAATGATAC 57.485 37.500 0.00 0.00 0.00 2.24
3106 17300 5.342433 CCAAATCATCGCAGCATAGAAAAA 58.658 37.500 0.00 0.00 0.00 1.94
3107 17301 4.734402 GCCAAATCATCGCAGCATAGAAAA 60.734 41.667 0.00 0.00 0.00 2.29
3108 17302 3.243168 GCCAAATCATCGCAGCATAGAAA 60.243 43.478 0.00 0.00 0.00 2.52
3109 17303 2.291465 GCCAAATCATCGCAGCATAGAA 59.709 45.455 0.00 0.00 0.00 2.10
3110 17304 1.875514 GCCAAATCATCGCAGCATAGA 59.124 47.619 0.00 0.00 0.00 1.98
3111 17305 1.605232 TGCCAAATCATCGCAGCATAG 59.395 47.619 0.00 0.00 0.00 2.23
3112 17306 1.677942 TGCCAAATCATCGCAGCATA 58.322 45.000 0.00 0.00 0.00 3.14
3113 17307 1.037493 ATGCCAAATCATCGCAGCAT 58.963 45.000 0.00 0.00 35.66 3.79
3114 17308 0.101579 CATGCCAAATCATCGCAGCA 59.898 50.000 0.00 0.00 35.66 4.41
3115 17309 0.596600 CCATGCCAAATCATCGCAGC 60.597 55.000 0.00 0.00 35.66 5.25
3116 17310 0.742505 ACCATGCCAAATCATCGCAG 59.257 50.000 0.00 0.00 35.66 5.18
3117 17311 0.456628 CACCATGCCAAATCATCGCA 59.543 50.000 0.00 0.00 36.84 5.10
3118 17312 0.249155 CCACCATGCCAAATCATCGC 60.249 55.000 0.00 0.00 0.00 4.58
3138 17332 3.646162 ACAAATCTACAGGGAGTCACACA 59.354 43.478 0.00 0.00 0.00 3.72
3139 17333 4.273148 ACAAATCTACAGGGAGTCACAC 57.727 45.455 0.00 0.00 0.00 3.82
3141 17335 6.635030 AAAAACAAATCTACAGGGAGTCAC 57.365 37.500 0.00 0.00 0.00 3.67
3146 17340 6.539173 TCAGCTAAAAACAAATCTACAGGGA 58.461 36.000 0.00 0.00 0.00 4.20
3147 17341 6.817765 TCAGCTAAAAACAAATCTACAGGG 57.182 37.500 0.00 0.00 0.00 4.45
3155 17349 6.256321 CAGCACAACTTCAGCTAAAAACAAAT 59.744 34.615 0.00 0.00 36.73 2.32
3156 17350 5.576384 CAGCACAACTTCAGCTAAAAACAAA 59.424 36.000 0.00 0.00 36.73 2.83
3157 17351 5.101628 CAGCACAACTTCAGCTAAAAACAA 58.898 37.500 0.00 0.00 36.73 2.83
3159 17353 4.920376 TCAGCACAACTTCAGCTAAAAAC 58.080 39.130 0.00 0.00 36.73 2.43
3160 17354 5.278463 GGATCAGCACAACTTCAGCTAAAAA 60.278 40.000 0.00 0.00 36.73 1.94
3161 17355 4.216257 GGATCAGCACAACTTCAGCTAAAA 59.784 41.667 0.00 0.00 36.73 1.52
3165 17359 1.350351 AGGATCAGCACAACTTCAGCT 59.650 47.619 0.00 0.00 39.63 4.24
3166 17360 1.818642 AGGATCAGCACAACTTCAGC 58.181 50.000 0.00 0.00 0.00 4.26
3167 17361 2.095364 GCAAGGATCAGCACAACTTCAG 60.095 50.000 0.00 0.00 0.00 3.02
3169 17363 1.135859 CGCAAGGATCAGCACAACTTC 60.136 52.381 0.00 0.00 0.00 3.01
3170 17364 0.877071 CGCAAGGATCAGCACAACTT 59.123 50.000 0.00 0.00 0.00 2.66
3171 17365 1.580845 GCGCAAGGATCAGCACAACT 61.581 55.000 0.30 0.00 38.28 3.16
3178 17386 0.167470 CACAACTGCGCAAGGATCAG 59.833 55.000 13.05 0.00 36.74 2.90
3181 17389 2.956987 GCACAACTGCGCAAGGAT 59.043 55.556 13.05 0.00 36.74 3.24
3195 17403 1.593196 TCAAGCCACACTAACAGCAC 58.407 50.000 0.00 0.00 0.00 4.40
3198 17406 2.942376 TGTGTTCAAGCCACACTAACAG 59.058 45.455 4.92 0.00 44.24 3.16
3199 17407 2.992593 TGTGTTCAAGCCACACTAACA 58.007 42.857 4.92 0.00 44.24 2.41
3202 17410 4.203226 TGAAATGTGTTCAAGCCACACTA 58.797 39.130 4.92 0.00 44.90 2.74
3203 17411 3.023119 TGAAATGTGTTCAAGCCACACT 58.977 40.909 4.92 0.00 44.90 3.55
3205 17413 2.223782 GCTGAAATGTGTTCAAGCCACA 60.224 45.455 0.00 0.00 46.03 4.17
3206 17414 2.223782 TGCTGAAATGTGTTCAAGCCAC 60.224 45.455 0.00 0.00 0.00 5.01
3207 17415 2.030371 TGCTGAAATGTGTTCAAGCCA 58.970 42.857 0.00 0.00 0.00 4.75
3208 17416 2.796593 GTTGCTGAAATGTGTTCAAGCC 59.203 45.455 0.00 0.00 0.00 4.35
3209 17417 3.709987 AGTTGCTGAAATGTGTTCAAGC 58.290 40.909 0.00 0.00 0.00 4.01
3210 17418 6.651755 AAAAGTTGCTGAAATGTGTTCAAG 57.348 33.333 0.00 0.00 0.00 3.02
3211 17419 6.648310 TGAAAAAGTTGCTGAAATGTGTTCAA 59.352 30.769 0.00 0.00 0.00 2.69
3212 17420 6.162079 TGAAAAAGTTGCTGAAATGTGTTCA 58.838 32.000 0.00 0.00 0.00 3.18
3213 17421 6.645700 TGAAAAAGTTGCTGAAATGTGTTC 57.354 33.333 0.00 0.00 0.00 3.18
3214 17422 6.594937 ACATGAAAAAGTTGCTGAAATGTGTT 59.405 30.769 0.00 0.00 0.00 3.32
3217 17425 8.362639 AGATACATGAAAAAGTTGCTGAAATGT 58.637 29.630 0.00 0.00 0.00 2.71
3218 17426 8.752766 AGATACATGAAAAAGTTGCTGAAATG 57.247 30.769 0.00 0.00 0.00 2.32
3224 17432 7.452880 TTGCTAGATACATGAAAAAGTTGCT 57.547 32.000 0.00 0.00 0.00 3.91
3225 17433 8.693542 AATTGCTAGATACATGAAAAAGTTGC 57.306 30.769 0.00 0.00 0.00 4.17
3254 17462 6.348458 CCGTCTAATGATTGCTTTCACAGAAA 60.348 38.462 0.00 0.00 0.00 2.52
3255 17463 5.122239 CCGTCTAATGATTGCTTTCACAGAA 59.878 40.000 0.00 0.00 0.00 3.02
3257 17465 4.393062 ACCGTCTAATGATTGCTTTCACAG 59.607 41.667 0.00 0.00 0.00 3.66
3259 17467 4.437390 CCACCGTCTAATGATTGCTTTCAC 60.437 45.833 0.00 0.00 0.00 3.18
3261 17469 3.065371 CCCACCGTCTAATGATTGCTTTC 59.935 47.826 0.00 0.00 0.00 2.62
3262 17470 3.016736 CCCACCGTCTAATGATTGCTTT 58.983 45.455 0.00 0.00 0.00 3.51
3264 17472 1.837439 TCCCACCGTCTAATGATTGCT 59.163 47.619 0.00 0.00 0.00 3.91
3265 17473 1.940613 GTCCCACCGTCTAATGATTGC 59.059 52.381 0.00 0.00 0.00 3.56
3266 17474 3.260475 TGTCCCACCGTCTAATGATTG 57.740 47.619 0.00 0.00 0.00 2.67
3267 17475 3.199946 ACATGTCCCACCGTCTAATGATT 59.800 43.478 0.00 0.00 0.00 2.57
3268 17476 2.771943 ACATGTCCCACCGTCTAATGAT 59.228 45.455 0.00 0.00 0.00 2.45
3269 17477 2.184533 ACATGTCCCACCGTCTAATGA 58.815 47.619 0.00 0.00 0.00 2.57
3278 17487 2.981859 ATCTACGAACATGTCCCACC 57.018 50.000 0.00 0.00 0.00 4.61
3323 17534 7.551035 TGCAGCTTTTACAAATTTTGACAAT 57.449 28.000 15.81 0.00 0.00 2.71
3328 17539 7.462731 TGTTCTTGCAGCTTTTACAAATTTTG 58.537 30.769 7.59 7.59 0.00 2.44
3333 17544 7.608308 AAAATGTTCTTGCAGCTTTTACAAA 57.392 28.000 0.00 0.00 0.00 2.83
3334 17545 8.763356 CATAAAATGTTCTTGCAGCTTTTACAA 58.237 29.630 0.00 0.00 0.00 2.41
3335 17546 7.384660 CCATAAAATGTTCTTGCAGCTTTTACA 59.615 33.333 0.00 0.00 0.00 2.41
3336 17547 7.384932 ACCATAAAATGTTCTTGCAGCTTTTAC 59.615 33.333 0.00 0.00 0.00 2.01
3338 17549 6.290605 ACCATAAAATGTTCTTGCAGCTTTT 58.709 32.000 0.00 0.00 0.00 2.27
3339 17550 5.857268 ACCATAAAATGTTCTTGCAGCTTT 58.143 33.333 0.00 0.00 0.00 3.51
3340 17551 5.473039 GACCATAAAATGTTCTTGCAGCTT 58.527 37.500 0.00 0.00 0.00 3.74
3342 17553 4.082026 AGGACCATAAAATGTTCTTGCAGC 60.082 41.667 0.00 0.00 0.00 5.25
3343 17554 5.649782 AGGACCATAAAATGTTCTTGCAG 57.350 39.130 0.00 0.00 0.00 4.41
3344 17555 6.418057 AAAGGACCATAAAATGTTCTTGCA 57.582 33.333 0.00 0.00 0.00 4.08
3346 17557 9.369904 CCATAAAAGGACCATAAAATGTTCTTG 57.630 33.333 0.00 0.00 0.00 3.02
3347 17558 9.100197 ACCATAAAAGGACCATAAAATGTTCTT 57.900 29.630 0.00 0.00 0.00 2.52
3348 17559 8.664669 ACCATAAAAGGACCATAAAATGTTCT 57.335 30.769 0.00 0.00 0.00 3.01
3349 17560 9.719355 AAACCATAAAAGGACCATAAAATGTTC 57.281 29.630 0.00 0.00 0.00 3.18
3358 17569 7.569240 TGTTTCAAAAACCATAAAAGGACCAT 58.431 30.769 0.00 0.00 0.00 3.55
3360 17571 9.719355 ATATGTTTCAAAAACCATAAAAGGACC 57.281 29.630 0.48 0.00 0.00 4.46
3392 17613 8.121305 TCCAGCAAATATCTTGTACAATTGTT 57.879 30.769 17.78 5.64 0.00 2.83
3396 17617 8.806146 AGTTTTCCAGCAAATATCTTGTACAAT 58.194 29.630 9.13 0.00 0.00 2.71
3397 17618 8.177119 AGTTTTCCAGCAAATATCTTGTACAA 57.823 30.769 8.28 8.28 0.00 2.41
3398 17619 7.759489 AGTTTTCCAGCAAATATCTTGTACA 57.241 32.000 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.