Multiple sequence alignment - TraesCS1A01G393500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G393500 chr1A 100.000 2456 0 0 1 2456 559942839 559940384 0.000000e+00 4536.0
1 TraesCS1A01G393500 chr1A 88.488 1025 57 28 643 1666 559979608 559978644 0.000000e+00 1182.0
2 TraesCS1A01G393500 chr1A 90.433 763 43 22 837 1596 559887028 559886293 0.000000e+00 977.0
3 TraesCS1A01G393500 chr1A 94.226 433 24 1 1663 2095 559978573 559978142 0.000000e+00 660.0
4 TraesCS1A01G393500 chr1A 92.727 385 21 4 1 382 559929605 559929225 1.280000e-152 549.0
5 TraesCS1A01G393500 chr1A 86.567 335 24 10 1663 1993 559886168 559885851 1.400000e-92 350.0
6 TraesCS1A01G393500 chr1A 91.775 231 15 3 608 835 559887520 559887291 3.940000e-83 318.0
7 TraesCS1A01G393500 chr1A 88.000 175 15 5 357 530 559929213 559929044 4.140000e-48 202.0
8 TraesCS1A01G393500 chr1A 84.768 151 11 5 461 599 572390328 572390178 9.160000e-30 141.0
9 TraesCS1A01G393500 chr1A 86.957 92 5 3 2005 2096 559885771 559885687 2.010000e-16 97.1
10 TraesCS1A01G393500 chr5D 89.676 1017 63 24 643 1647 462746069 462747055 0.000000e+00 1258.0
11 TraesCS1A01G393500 chr5D 90.772 596 31 12 657 1243 462669424 462670004 0.000000e+00 774.0
12 TraesCS1A01G393500 chr5D 92.661 327 13 4 1346 1666 462670009 462670330 6.190000e-126 460.0
13 TraesCS1A01G393500 chr5D 86.585 328 32 5 1682 2004 462670427 462670747 3.890000e-93 351.0
14 TraesCS1A01G393500 chr5D 90.588 255 17 3 1663 1917 462747118 462747365 5.060000e-87 331.0
15 TraesCS1A01G393500 chr5D 86.802 197 23 2 2173 2368 355098457 355098263 1.480000e-52 217.0
16 TraesCS1A01G393500 chrUn 89.958 946 66 19 710 1647 67088228 67087304 0.000000e+00 1194.0
17 TraesCS1A01G393500 chrUn 89.958 946 66 19 710 1647 307431406 307432330 0.000000e+00 1194.0
18 TraesCS1A01G393500 chrUn 83.611 720 66 25 657 1351 199466296 199465604 1.600000e-176 628.0
19 TraesCS1A01G393500 chrUn 88.068 352 30 8 1663 2004 67087241 67086892 8.180000e-110 407.0
20 TraesCS1A01G393500 chrUn 88.068 352 30 8 1663 2004 307432393 307432742 8.180000e-110 407.0
21 TraesCS1A01G393500 chrUn 92.553 94 5 1 291 382 478572198 478572105 1.530000e-27 134.0
22 TraesCS1A01G393500 chr5A 88.876 872 50 25 643 1506 582652640 582653472 0.000000e+00 1029.0
23 TraesCS1A01G393500 chr5A 83.875 738 78 19 660 1381 582886921 582887633 0.000000e+00 665.0
24 TraesCS1A01G393500 chr5A 95.349 43 0 2 2369 2411 362144205 362144245 1.580000e-07 67.6
25 TraesCS1A01G393500 chr5B 84.444 720 60 24 657 1351 569224148 569224840 0.000000e+00 662.0
26 TraesCS1A01G393500 chr5B 91.447 456 29 4 1214 1666 569148462 569148910 3.470000e-173 617.0
27 TraesCS1A01G393500 chr5B 91.447 456 29 4 1214 1666 569249676 569250124 3.470000e-173 617.0
28 TraesCS1A01G393500 chr5B 90.282 319 26 3 1663 1976 569148966 569149284 1.760000e-111 412.0
29 TraesCS1A01G393500 chr5B 89.342 319 29 3 1663 1976 569250180 569250498 1.770000e-106 396.0
30 TraesCS1A01G393500 chr5B 92.553 94 5 1 291 382 336893916 336894009 1.530000e-27 134.0
31 TraesCS1A01G393500 chr5B 92.553 94 5 1 291 382 336931988 336932081 1.530000e-27 134.0
32 TraesCS1A01G393500 chr5B 90.426 94 7 2 291 382 565532299 565532206 3.320000e-24 122.0
33 TraesCS1A01G393500 chr7D 90.094 212 17 3 2162 2370 512000350 512000140 3.110000e-69 272.0
34 TraesCS1A01G393500 chr4A 88.095 210 24 1 2162 2370 645306444 645306235 5.240000e-62 248.0
35 TraesCS1A01G393500 chr1D 86.996 223 26 3 2162 2381 36532139 36531917 5.240000e-62 248.0
36 TraesCS1A01G393500 chr1D 87.264 212 21 3 2162 2368 4999786 4999996 1.140000e-58 237.0
37 TraesCS1A01G393500 chr1D 83.871 93 12 3 519 610 458763331 458763421 4.350000e-13 86.1
38 TraesCS1A01G393500 chr1D 95.349 43 1 1 2370 2411 248926669 248926627 1.580000e-07 67.6
39 TraesCS1A01G393500 chr3D 87.097 217 26 2 2157 2371 357150156 357149940 6.780000e-61 244.0
40 TraesCS1A01G393500 chr3D 84.946 93 12 2 519 611 234325391 234325481 2.600000e-15 93.5
41 TraesCS1A01G393500 chr3D 77.095 179 29 6 436 602 299744315 299744493 2.600000e-15 93.5
42 TraesCS1A01G393500 chr7B 87.143 210 26 1 2162 2370 604800414 604800623 1.140000e-58 237.0
43 TraesCS1A01G393500 chr7B 86.190 210 28 1 2162 2370 580938566 580938357 2.460000e-55 226.0
44 TraesCS1A01G393500 chr7B 86.747 83 9 2 519 601 70071506 70071586 9.350000e-15 91.6
45 TraesCS1A01G393500 chr7B 100.000 38 0 0 2370 2407 60242997 60242960 1.220000e-08 71.3
46 TraesCS1A01G393500 chr1B 85.238 210 27 2 2162 2370 637957590 637957796 1.910000e-51 213.0
47 TraesCS1A01G393500 chr1B 89.362 94 7 2 291 382 670610042 670610134 5.550000e-22 115.0
48 TraesCS1A01G393500 chr1B 88.679 53 4 2 2370 2420 229528587 229528535 2.040000e-06 63.9
49 TraesCS1A01G393500 chr3B 83.799 179 17 3 435 601 752304851 752304673 2.530000e-35 159.0
50 TraesCS1A01G393500 chr3B 89.655 87 6 2 291 374 214925529 214925443 9.290000e-20 108.0
51 TraesCS1A01G393500 chr2A 81.977 172 23 4 433 597 682633517 682633687 3.290000e-29 139.0
52 TraesCS1A01G393500 chr2B 94.253 87 4 1 2370 2456 60976816 60976731 5.510000e-27 132.0
53 TraesCS1A01G393500 chr4B 93.182 88 4 1 291 376 460036566 460036479 7.130000e-26 128.0
54 TraesCS1A01G393500 chr4B 88.636 88 8 2 291 376 402212158 402212245 3.340000e-19 106.0
55 TraesCS1A01G393500 chr4B 88.889 54 3 3 2355 2407 193409147 193409198 2.040000e-06 63.9
56 TraesCS1A01G393500 chr7A 82.550 149 13 2 467 602 184119250 184119398 4.290000e-23 119.0
57 TraesCS1A01G393500 chr7A 91.667 48 3 1 2370 2416 83366138 83366091 5.670000e-07 65.8
58 TraesCS1A01G393500 chr6D 76.344 186 31 7 436 608 348607212 348607397 1.210000e-13 87.9
59 TraesCS1A01G393500 chr6D 92.727 55 2 2 2369 2421 317015484 317015538 7.280000e-11 78.7
60 TraesCS1A01G393500 chr2D 83.333 96 12 4 519 612 575375906 575375813 4.350000e-13 86.1
61 TraesCS1A01G393500 chr4D 93.750 48 1 2 2370 2416 487453268 487453314 1.220000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G393500 chr1A 559940384 559942839 2455 True 4536.000000 4536 100.0000 1 2456 1 chr1A.!!$R1 2455
1 TraesCS1A01G393500 chr1A 559978142 559979608 1466 True 921.000000 1182 91.3570 643 2095 2 chr1A.!!$R5 1452
2 TraesCS1A01G393500 chr1A 559885687 559887520 1833 True 435.525000 977 88.9330 608 2096 4 chr1A.!!$R3 1488
3 TraesCS1A01G393500 chr1A 559929044 559929605 561 True 375.500000 549 90.3635 1 530 2 chr1A.!!$R4 529
4 TraesCS1A01G393500 chr5D 462746069 462747365 1296 False 794.500000 1258 90.1320 643 1917 2 chr5D.!!$F2 1274
5 TraesCS1A01G393500 chr5D 462669424 462670747 1323 False 528.333333 774 90.0060 657 2004 3 chr5D.!!$F1 1347
6 TraesCS1A01G393500 chrUn 67086892 67088228 1336 True 800.500000 1194 89.0130 710 2004 2 chrUn.!!$R3 1294
7 TraesCS1A01G393500 chrUn 307431406 307432742 1336 False 800.500000 1194 89.0130 710 2004 2 chrUn.!!$F1 1294
8 TraesCS1A01G393500 chrUn 199465604 199466296 692 True 628.000000 628 83.6110 657 1351 1 chrUn.!!$R1 694
9 TraesCS1A01G393500 chr5A 582652640 582653472 832 False 1029.000000 1029 88.8760 643 1506 1 chr5A.!!$F2 863
10 TraesCS1A01G393500 chr5A 582886921 582887633 712 False 665.000000 665 83.8750 660 1381 1 chr5A.!!$F3 721
11 TraesCS1A01G393500 chr5B 569224148 569224840 692 False 662.000000 662 84.4440 657 1351 1 chr5B.!!$F3 694
12 TraesCS1A01G393500 chr5B 569148462 569149284 822 False 514.500000 617 90.8645 1214 1976 2 chr5B.!!$F4 762
13 TraesCS1A01G393500 chr5B 569249676 569250498 822 False 506.500000 617 90.3945 1214 1976 2 chr5B.!!$F5 762

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
140 141 0.535102 AGGTGCACTTCTTTCCCACG 60.535 55.0 17.98 0.0 0.00 4.94 F
153 154 0.912487 TCCCACGGGGCCATATATCC 60.912 60.0 4.39 0.0 43.94 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1387 1743 0.036010 AAGCAGACATCAACTCGGGG 60.036 55.0 0.0 0.0 0.0 5.73 R
2117 2671 0.042131 TTGATACAGAGGTCGGGGGT 59.958 55.0 0.0 0.0 0.0 4.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.680237 CCTCTCGGCCGCACACAA 62.680 66.667 23.51 0.00 0.00 3.33
74 75 1.620819 GAAAGAGCTCAGACCTGACCA 59.379 52.381 17.77 0.00 35.46 4.02
78 79 0.764369 AGCTCAGACCTGACCACCAA 60.764 55.000 0.00 0.00 35.46 3.67
113 114 2.022764 TCGCCACATGTGTATCTTGG 57.977 50.000 23.79 8.42 0.00 3.61
123 124 1.474077 GTGTATCTTGGCCTTTGCAGG 59.526 52.381 3.32 0.00 44.28 4.85
140 141 0.535102 AGGTGCACTTCTTTCCCACG 60.535 55.000 17.98 0.00 0.00 4.94
141 142 1.515521 GGTGCACTTCTTTCCCACGG 61.516 60.000 17.98 0.00 0.00 4.94
153 154 0.912487 TCCCACGGGGCCATATATCC 60.912 60.000 4.39 0.00 43.94 2.59
186 190 4.180946 CGACGAGGACTCCGGCTG 62.181 72.222 0.00 0.00 31.81 4.85
187 191 3.827898 GACGAGGACTCCGGCTGG 61.828 72.222 4.71 4.71 31.20 4.85
214 218 1.751351 GGTCCTTGCCCTATTCAAAGC 59.249 52.381 0.00 0.00 0.00 3.51
249 253 6.233434 TGATAAGCAGATTTCACACTGAAGT 58.767 36.000 0.00 0.00 37.70 3.01
260 264 9.959749 GATTTCACACTGAAGTTACCATTTTTA 57.040 29.630 0.00 0.00 37.70 1.52
266 270 8.947115 ACACTGAAGTTACCATTTTTATCTAGC 58.053 33.333 0.00 0.00 0.00 3.42
289 293 7.619050 AGCTCCATGTCATATAATCCTTAGTG 58.381 38.462 0.00 0.00 0.00 2.74
301 305 3.083122 TCCTTAGTGCTACCTTCGTCT 57.917 47.619 0.00 0.00 0.00 4.18
383 387 8.721019 AATTAATAATGCATGTCACCAAAAGG 57.279 30.769 0.00 0.00 0.00 3.11
385 389 5.999205 ATAATGCATGTCACCAAAAGGAA 57.001 34.783 0.00 0.00 0.00 3.36
386 390 3.665745 ATGCATGTCACCAAAAGGAAC 57.334 42.857 0.00 0.00 0.00 3.62
388 392 2.964464 TGCATGTCACCAAAAGGAACAT 59.036 40.909 0.00 0.00 0.00 2.71
389 393 3.387374 TGCATGTCACCAAAAGGAACATT 59.613 39.130 0.00 0.00 0.00 2.71
390 394 4.586421 TGCATGTCACCAAAAGGAACATTA 59.414 37.500 0.00 0.00 0.00 1.90
391 395 5.245751 TGCATGTCACCAAAAGGAACATTAT 59.754 36.000 0.00 0.00 0.00 1.28
392 396 6.165577 GCATGTCACCAAAAGGAACATTATT 58.834 36.000 0.00 0.00 0.00 1.40
394 398 7.981225 GCATGTCACCAAAAGGAACATTATTAT 59.019 33.333 0.00 0.00 0.00 1.28
431 467 4.705507 TGTGGTTAAAGTTTAGCACAACCA 59.294 37.500 18.93 16.57 46.22 3.67
444 480 2.098117 GCACAACCAGGATTGCTATGTC 59.902 50.000 0.00 0.00 32.47 3.06
454 490 4.343526 AGGATTGCTATGTCTCAATCGACT 59.656 41.667 8.33 0.43 45.69 4.18
475 511 6.127980 CGACTGAGACATAACCAAGTCTTAGA 60.128 42.308 17.57 0.00 45.86 2.10
509 545 9.915629 ATATTTGTAGGATCTTACGTTGAGATC 57.084 33.333 23.23 23.23 45.61 2.75
517 553 2.442212 TACGTTGAGATCCGTGCAAA 57.558 45.000 0.00 0.00 37.91 3.68
518 554 1.808411 ACGTTGAGATCCGTGCAAAT 58.192 45.000 0.00 0.00 35.69 2.32
519 555 2.151202 ACGTTGAGATCCGTGCAAATT 58.849 42.857 0.00 0.00 35.69 1.82
520 556 2.552315 ACGTTGAGATCCGTGCAAATTT 59.448 40.909 0.00 0.00 35.69 1.82
521 557 3.004315 ACGTTGAGATCCGTGCAAATTTT 59.996 39.130 0.00 0.00 35.69 1.82
522 558 3.980775 CGTTGAGATCCGTGCAAATTTTT 59.019 39.130 0.00 0.00 0.00 1.94
566 602 9.263446 TGTTATATCACTTAACTTAGACCTGGT 57.737 33.333 0.00 0.00 32.09 4.00
572 608 8.842358 TCACTTAACTTAGACCTGGTTAAATG 57.158 34.615 0.00 0.00 35.42 2.32
573 609 8.434392 TCACTTAACTTAGACCTGGTTAAATGT 58.566 33.333 0.00 0.00 35.53 2.71
574 610 8.718734 CACTTAACTTAGACCTGGTTAAATGTC 58.281 37.037 0.00 0.00 35.78 3.06
575 611 8.434392 ACTTAACTTAGACCTGGTTAAATGTCA 58.566 33.333 0.00 0.00 35.78 3.58
576 612 8.842358 TTAACTTAGACCTGGTTAAATGTCAG 57.158 34.615 0.00 0.00 34.05 3.51
577 613 6.435292 ACTTAGACCTGGTTAAATGTCAGT 57.565 37.500 0.00 0.00 0.00 3.41
578 614 6.465084 ACTTAGACCTGGTTAAATGTCAGTC 58.535 40.000 0.00 0.00 0.00 3.51
579 615 3.926616 AGACCTGGTTAAATGTCAGTCG 58.073 45.455 0.00 0.00 0.00 4.18
580 616 3.576982 AGACCTGGTTAAATGTCAGTCGA 59.423 43.478 0.00 0.00 0.00 4.20
581 617 3.660865 ACCTGGTTAAATGTCAGTCGAC 58.339 45.455 7.70 7.70 42.93 4.20
582 618 3.323979 ACCTGGTTAAATGTCAGTCGACT 59.676 43.478 13.58 13.58 43.06 4.18
583 619 3.679980 CCTGGTTAAATGTCAGTCGACTG 59.320 47.826 34.76 34.76 43.06 3.51
594 630 2.701107 CAGTCGACTGAGACCTAGACA 58.299 52.381 36.73 0.00 46.59 3.41
595 631 2.417239 CAGTCGACTGAGACCTAGACAC 59.583 54.545 36.73 0.00 46.59 3.67
596 632 2.038689 AGTCGACTGAGACCTAGACACA 59.961 50.000 19.30 0.00 41.83 3.72
597 633 2.160022 GTCGACTGAGACCTAGACACAC 59.840 54.545 8.70 0.00 35.22 3.82
598 634 1.469308 CGACTGAGACCTAGACACACC 59.531 57.143 0.00 0.00 0.00 4.16
599 635 1.819903 GACTGAGACCTAGACACACCC 59.180 57.143 0.00 0.00 0.00 4.61
600 636 1.429687 ACTGAGACCTAGACACACCCT 59.570 52.381 0.00 0.00 0.00 4.34
601 637 2.648304 ACTGAGACCTAGACACACCCTA 59.352 50.000 0.00 0.00 0.00 3.53
602 638 3.283751 CTGAGACCTAGACACACCCTAG 58.716 54.545 0.00 0.00 34.77 3.02
603 639 2.025898 GAGACCTAGACACACCCTAGC 58.974 57.143 0.00 0.00 33.91 3.42
604 640 1.358103 AGACCTAGACACACCCTAGCA 59.642 52.381 0.00 0.00 33.91 3.49
605 641 1.477295 GACCTAGACACACCCTAGCAC 59.523 57.143 0.00 0.00 33.91 4.40
606 642 1.203137 ACCTAGACACACCCTAGCACA 60.203 52.381 0.00 0.00 33.91 4.57
614 650 4.072131 ACACACCCTAGCACAAAATACTG 58.928 43.478 0.00 0.00 0.00 2.74
618 654 3.844211 ACCCTAGCACAAAATACTGAGGA 59.156 43.478 0.00 0.00 0.00 3.71
631 667 8.338259 CAAAATACTGAGGAGACCAATAAATCG 58.662 37.037 0.00 0.00 0.00 3.34
835 1161 2.432510 CCTGGGCCTCCTAATCGATATC 59.567 54.545 4.53 0.00 0.00 1.63
842 1168 5.105837 GGCCTCCTAATCGATATCTAAACGT 60.106 44.000 0.00 0.00 0.00 3.99
878 1208 1.066257 CCACACAAAGCACAGCACC 59.934 57.895 0.00 0.00 0.00 5.01
902 1232 3.845781 AGCACAAGAGAACCTTCTTCA 57.154 42.857 0.00 0.00 37.73 3.02
905 1235 4.067896 GCACAAGAGAACCTTCTTCATCA 58.932 43.478 0.00 0.00 37.73 3.07
913 1249 8.372877 AGAGAACCTTCTTCATCATCTTCTTA 57.627 34.615 0.00 0.00 37.73 2.10
920 1262 9.835389 CCTTCTTCATCATCTTCTTATTCTTCT 57.165 33.333 0.00 0.00 0.00 2.85
1077 1421 1.740296 GTGCACCGGCGAGTACATT 60.740 57.895 9.30 0.00 45.35 2.71
1411 1767 3.320626 CGAGTTGATGTCTGCTTCTTGA 58.679 45.455 0.00 0.00 0.00 3.02
1548 1927 5.947228 CACACAAGTGTTTGATGGAGTAT 57.053 39.130 2.55 0.00 42.83 2.12
1607 1993 4.927978 AGATCTTGATCTACCCAACGAG 57.072 45.455 11.03 0.00 0.00 4.18
1627 2013 2.670934 AGCAGCTGTTCTTGGCCG 60.671 61.111 16.64 0.00 0.00 6.13
1655 2043 5.858049 TCCTTTCGCGGTGTAATAATATACG 59.142 40.000 6.13 0.00 0.00 3.06
1679 2142 2.547211 CTGGTGCACTTGTTCTTCAGAG 59.453 50.000 17.98 0.00 0.00 3.35
1810 2285 1.603802 CCTCAACACACGTGCAGAAAT 59.396 47.619 17.22 0.00 0.00 2.17
1831 2306 8.364142 AGAAATATGAGAGGTTGATACTGCTAC 58.636 37.037 0.00 0.00 0.00 3.58
1853 2334 1.021390 CATGCTCACCCGTGGAGAAC 61.021 60.000 0.00 0.00 34.24 3.01
1929 2415 2.227388 GGAAGATTTGTGTCCACTGCAG 59.773 50.000 13.48 13.48 0.00 4.41
2075 2629 2.094906 TGATCGACGTCCAAGTTCGAAT 60.095 45.455 10.58 0.00 36.41 3.34
2126 2680 2.519771 AAAAAGGATTACCCCCGACC 57.480 50.000 0.00 0.00 36.73 4.79
2127 2681 1.677490 AAAAGGATTACCCCCGACCT 58.323 50.000 0.00 0.00 36.73 3.85
2128 2682 1.210538 AAAGGATTACCCCCGACCTC 58.789 55.000 0.00 0.00 36.73 3.85
2129 2683 0.342313 AAGGATTACCCCCGACCTCT 59.658 55.000 0.00 0.00 36.73 3.69
2130 2684 0.398664 AGGATTACCCCCGACCTCTG 60.399 60.000 0.00 0.00 36.73 3.35
2131 2685 0.690077 GGATTACCCCCGACCTCTGT 60.690 60.000 0.00 0.00 0.00 3.41
2132 2686 1.412074 GGATTACCCCCGACCTCTGTA 60.412 57.143 0.00 0.00 0.00 2.74
2133 2687 2.606378 GATTACCCCCGACCTCTGTAT 58.394 52.381 0.00 0.00 0.00 2.29
2134 2688 2.077687 TTACCCCCGACCTCTGTATC 57.922 55.000 0.00 0.00 0.00 2.24
2135 2689 0.928505 TACCCCCGACCTCTGTATCA 59.071 55.000 0.00 0.00 0.00 2.15
2136 2690 0.042131 ACCCCCGACCTCTGTATCAA 59.958 55.000 0.00 0.00 0.00 2.57
2137 2691 0.464452 CCCCCGACCTCTGTATCAAC 59.536 60.000 0.00 0.00 0.00 3.18
2138 2692 1.191535 CCCCGACCTCTGTATCAACA 58.808 55.000 0.00 0.00 0.00 3.33
2139 2693 1.762957 CCCCGACCTCTGTATCAACAT 59.237 52.381 0.00 0.00 34.37 2.71
2140 2694 2.483714 CCCCGACCTCTGTATCAACATG 60.484 54.545 0.00 0.00 34.37 3.21
2141 2695 2.430694 CCCGACCTCTGTATCAACATGA 59.569 50.000 0.00 0.00 34.37 3.07
2142 2696 3.070159 CCCGACCTCTGTATCAACATGAT 59.930 47.826 0.00 0.00 40.72 2.45
2143 2697 4.053983 CCGACCTCTGTATCAACATGATG 58.946 47.826 0.00 0.00 37.70 3.07
2144 2698 3.492383 CGACCTCTGTATCAACATGATGC 59.508 47.826 0.00 2.57 37.70 3.91
2145 2699 4.445453 GACCTCTGTATCAACATGATGCA 58.555 43.478 0.00 10.08 45.03 3.96
2146 2700 4.194640 ACCTCTGTATCAACATGATGCAC 58.805 43.478 0.00 0.01 42.97 4.57
2147 2701 4.193865 CCTCTGTATCAACATGATGCACA 58.806 43.478 0.00 4.96 42.97 4.57
2148 2702 4.034858 CCTCTGTATCAACATGATGCACAC 59.965 45.833 0.00 0.00 42.97 3.82
2149 2703 3.618150 TCTGTATCAACATGATGCACACG 59.382 43.478 0.00 0.00 42.97 4.49
2150 2704 2.095692 TGTATCAACATGATGCACACGC 59.904 45.455 0.00 0.00 42.97 5.34
2151 2705 0.452987 ATCAACATGATGCACACGCC 59.547 50.000 0.00 0.00 35.43 5.68
2152 2706 0.888285 TCAACATGATGCACACGCCA 60.888 50.000 0.00 0.00 37.32 5.69
2153 2707 0.171679 CAACATGATGCACACGCCAT 59.828 50.000 0.00 0.00 37.32 4.40
2154 2708 0.452987 AACATGATGCACACGCCATC 59.547 50.000 0.00 0.00 37.32 3.51
2155 2709 0.393402 ACATGATGCACACGCCATCT 60.393 50.000 0.00 0.00 37.32 2.90
2156 2710 0.736636 CATGATGCACACGCCATCTT 59.263 50.000 0.00 0.00 37.32 2.40
2157 2711 1.133598 CATGATGCACACGCCATCTTT 59.866 47.619 0.00 0.00 37.32 2.52
2158 2712 2.106477 TGATGCACACGCCATCTTTA 57.894 45.000 0.00 0.00 37.32 1.85
2159 2713 2.642427 TGATGCACACGCCATCTTTAT 58.358 42.857 0.00 0.00 37.32 1.40
2160 2714 3.016031 TGATGCACACGCCATCTTTATT 58.984 40.909 0.00 0.00 37.32 1.40
2161 2715 4.195416 TGATGCACACGCCATCTTTATTA 58.805 39.130 0.00 0.00 37.32 0.98
2162 2716 4.637977 TGATGCACACGCCATCTTTATTAA 59.362 37.500 0.00 0.00 37.32 1.40
2163 2717 5.299028 TGATGCACACGCCATCTTTATTAAT 59.701 36.000 0.00 0.00 37.32 1.40
2164 2718 5.168526 TGCACACGCCATCTTTATTAATC 57.831 39.130 0.00 0.00 37.32 1.75
2165 2719 4.637977 TGCACACGCCATCTTTATTAATCA 59.362 37.500 0.00 0.00 37.32 2.57
2166 2720 5.124617 TGCACACGCCATCTTTATTAATCAA 59.875 36.000 0.00 0.00 37.32 2.57
2167 2721 6.183360 TGCACACGCCATCTTTATTAATCAAT 60.183 34.615 0.00 0.00 37.32 2.57
2168 2722 7.012799 TGCACACGCCATCTTTATTAATCAATA 59.987 33.333 0.00 0.00 37.32 1.90
2169 2723 7.323656 GCACACGCCATCTTTATTAATCAATAC 59.676 37.037 0.00 0.00 0.00 1.89
2170 2724 8.341903 CACACGCCATCTTTATTAATCAATACA 58.658 33.333 0.00 0.00 0.00 2.29
2171 2725 8.898761 ACACGCCATCTTTATTAATCAATACAA 58.101 29.630 0.00 0.00 0.00 2.41
2172 2726 9.385902 CACGCCATCTTTATTAATCAATACAAG 57.614 33.333 0.00 0.00 0.00 3.16
2173 2727 8.567948 ACGCCATCTTTATTAATCAATACAAGG 58.432 33.333 0.00 0.00 0.00 3.61
2174 2728 8.783093 CGCCATCTTTATTAATCAATACAAGGA 58.217 33.333 0.00 0.00 0.00 3.36
2185 2739 5.991328 TCAATACAAGGATCAATCGAAGC 57.009 39.130 0.00 0.00 0.00 3.86
2186 2740 4.816385 TCAATACAAGGATCAATCGAAGCC 59.184 41.667 0.00 0.00 0.00 4.35
2187 2741 4.696479 ATACAAGGATCAATCGAAGCCT 57.304 40.909 0.00 0.00 32.89 4.58
2188 2742 2.911484 ACAAGGATCAATCGAAGCCTC 58.089 47.619 0.00 0.00 30.93 4.70
2189 2743 2.216898 CAAGGATCAATCGAAGCCTCC 58.783 52.381 0.00 0.00 30.93 4.30
2190 2744 1.799933 AGGATCAATCGAAGCCTCCT 58.200 50.000 0.00 0.00 0.00 3.69
2191 2745 2.122768 AGGATCAATCGAAGCCTCCTT 58.877 47.619 0.00 0.00 28.77 3.36
2192 2746 2.103941 AGGATCAATCGAAGCCTCCTTC 59.896 50.000 0.00 0.00 43.23 3.46
2193 2747 2.103941 GGATCAATCGAAGCCTCCTTCT 59.896 50.000 0.00 0.00 44.24 2.85
2194 2748 3.322254 GGATCAATCGAAGCCTCCTTCTA 59.678 47.826 0.00 0.00 44.24 2.10
2195 2749 4.555262 GATCAATCGAAGCCTCCTTCTAG 58.445 47.826 0.00 0.00 44.24 2.43
2196 2750 2.695666 TCAATCGAAGCCTCCTTCTAGG 59.304 50.000 0.00 0.00 44.24 3.02
2204 2758 2.762535 CCTCCTTCTAGGCGAACAAA 57.237 50.000 0.00 0.00 34.61 2.83
2205 2759 2.622436 CCTCCTTCTAGGCGAACAAAG 58.378 52.381 0.00 0.00 34.61 2.77
2206 2760 2.028020 CCTCCTTCTAGGCGAACAAAGT 60.028 50.000 0.00 0.00 34.61 2.66
2207 2761 3.254892 CTCCTTCTAGGCGAACAAAGTC 58.745 50.000 0.00 0.00 34.61 3.01
2208 2762 1.993370 CCTTCTAGGCGAACAAAGTCG 59.007 52.381 0.00 0.00 43.98 4.18
2216 2770 1.779569 CGAACAAAGTCGCTACACCT 58.220 50.000 0.00 0.00 33.66 4.00
2217 2771 2.937591 CGAACAAAGTCGCTACACCTA 58.062 47.619 0.00 0.00 33.66 3.08
2218 2772 2.660236 CGAACAAAGTCGCTACACCTAC 59.340 50.000 0.00 0.00 33.66 3.18
2219 2773 3.645884 GAACAAAGTCGCTACACCTACA 58.354 45.455 0.00 0.00 0.00 2.74
2220 2774 3.738830 ACAAAGTCGCTACACCTACAA 57.261 42.857 0.00 0.00 0.00 2.41
2221 2775 3.650139 ACAAAGTCGCTACACCTACAAG 58.350 45.455 0.00 0.00 0.00 3.16
2222 2776 2.365408 AAGTCGCTACACCTACAAGC 57.635 50.000 0.00 0.00 0.00 4.01
2223 2777 1.254026 AGTCGCTACACCTACAAGCA 58.746 50.000 0.00 0.00 35.98 3.91
2224 2778 1.825474 AGTCGCTACACCTACAAGCAT 59.175 47.619 0.00 0.00 35.98 3.79
2225 2779 3.021695 AGTCGCTACACCTACAAGCATA 58.978 45.455 0.00 0.00 35.98 3.14
2226 2780 3.114065 GTCGCTACACCTACAAGCATAC 58.886 50.000 0.00 0.00 35.98 2.39
2227 2781 2.756207 TCGCTACACCTACAAGCATACA 59.244 45.455 0.00 0.00 35.98 2.29
2228 2782 3.116300 CGCTACACCTACAAGCATACAG 58.884 50.000 0.00 0.00 35.98 2.74
2229 2783 3.181490 CGCTACACCTACAAGCATACAGA 60.181 47.826 0.00 0.00 35.98 3.41
2230 2784 4.499865 CGCTACACCTACAAGCATACAGAT 60.500 45.833 0.00 0.00 35.98 2.90
2231 2785 4.747108 GCTACACCTACAAGCATACAGATG 59.253 45.833 0.00 0.00 36.26 2.90
2232 2786 4.826274 ACACCTACAAGCATACAGATGT 57.174 40.909 0.00 0.00 35.30 3.06
2233 2787 4.507710 ACACCTACAAGCATACAGATGTG 58.492 43.478 0.00 0.00 35.30 3.21
2234 2788 3.310774 CACCTACAAGCATACAGATGTGC 59.689 47.826 0.00 0.00 42.97 4.57
2235 2789 2.874701 CCTACAAGCATACAGATGTGCC 59.125 50.000 0.00 0.00 43.65 5.01
2236 2790 1.755179 ACAAGCATACAGATGTGCCC 58.245 50.000 0.00 0.00 43.65 5.36
2237 2791 1.283029 ACAAGCATACAGATGTGCCCT 59.717 47.619 0.00 0.00 43.65 5.19
2238 2792 1.674441 CAAGCATACAGATGTGCCCTG 59.326 52.381 0.00 0.00 43.65 4.45
2239 2793 0.914644 AGCATACAGATGTGCCCTGT 59.085 50.000 0.00 0.00 43.65 4.00
2240 2794 1.134280 AGCATACAGATGTGCCCTGTC 60.134 52.381 0.00 0.00 43.65 3.51
2241 2795 1.959042 CATACAGATGTGCCCTGTCC 58.041 55.000 0.00 0.00 43.18 4.02
2242 2796 0.465705 ATACAGATGTGCCCTGTCCG 59.534 55.000 0.00 0.00 43.18 4.79
2243 2797 2.238847 TACAGATGTGCCCTGTCCGC 62.239 60.000 0.00 0.00 43.18 5.54
2244 2798 3.321648 AGATGTGCCCTGTCCGCA 61.322 61.111 0.00 0.00 0.00 5.69
2245 2799 2.821366 GATGTGCCCTGTCCGCAG 60.821 66.667 0.00 0.00 42.22 5.18
2246 2800 3.315142 GATGTGCCCTGTCCGCAGA 62.315 63.158 0.00 0.00 45.28 4.26
2247 2801 2.803155 GATGTGCCCTGTCCGCAGAA 62.803 60.000 0.00 0.00 45.28 3.02
2248 2802 3.050275 GTGCCCTGTCCGCAGAAC 61.050 66.667 0.00 0.00 45.28 3.01
2249 2803 3.555324 TGCCCTGTCCGCAGAACA 61.555 61.111 0.00 0.00 45.28 3.18
2250 2804 2.743928 GCCCTGTCCGCAGAACAG 60.744 66.667 3.72 3.72 44.69 3.16
2254 2808 4.750460 TGTCCGCAGAACAGACAC 57.250 55.556 0.00 0.00 0.00 3.67
2255 2809 1.819905 TGTCCGCAGAACAGACACA 59.180 52.632 0.00 0.00 0.00 3.72
2256 2810 0.176910 TGTCCGCAGAACAGACACAA 59.823 50.000 0.00 0.00 0.00 3.33
2257 2811 1.202639 TGTCCGCAGAACAGACACAAT 60.203 47.619 0.00 0.00 0.00 2.71
2258 2812 1.461127 GTCCGCAGAACAGACACAATC 59.539 52.381 0.00 0.00 0.00 2.67
2259 2813 1.344438 TCCGCAGAACAGACACAATCT 59.656 47.619 0.00 0.00 38.66 2.40
2260 2814 2.560981 TCCGCAGAACAGACACAATCTA 59.439 45.455 0.00 0.00 35.15 1.98
2261 2815 3.006430 TCCGCAGAACAGACACAATCTAA 59.994 43.478 0.00 0.00 35.15 2.10
2262 2816 3.935203 CCGCAGAACAGACACAATCTAAT 59.065 43.478 0.00 0.00 35.15 1.73
2263 2817 4.033358 CCGCAGAACAGACACAATCTAATC 59.967 45.833 0.00 0.00 35.15 1.75
2264 2818 4.867047 CGCAGAACAGACACAATCTAATCT 59.133 41.667 0.00 0.00 35.15 2.40
2265 2819 6.036470 CGCAGAACAGACACAATCTAATCTA 58.964 40.000 0.00 0.00 35.15 1.98
2266 2820 6.198029 CGCAGAACAGACACAATCTAATCTAG 59.802 42.308 0.00 0.00 35.15 2.43
2267 2821 7.038659 GCAGAACAGACACAATCTAATCTAGT 58.961 38.462 0.00 0.00 35.15 2.57
2268 2822 7.009999 GCAGAACAGACACAATCTAATCTAGTG 59.990 40.741 0.00 0.00 35.15 2.74
2269 2823 7.490725 CAGAACAGACACAATCTAATCTAGTGG 59.509 40.741 0.00 0.00 35.15 4.00
2270 2824 5.665459 ACAGACACAATCTAATCTAGTGGC 58.335 41.667 0.00 0.00 38.49 5.01
2271 2825 5.053145 CAGACACAATCTAATCTAGTGGCC 58.947 45.833 0.00 0.00 39.00 5.36
2272 2826 4.965532 AGACACAATCTAATCTAGTGGCCT 59.034 41.667 3.32 0.00 39.00 5.19
2273 2827 5.028549 ACACAATCTAATCTAGTGGCCTG 57.971 43.478 3.32 0.00 34.65 4.85
2274 2828 4.716784 ACACAATCTAATCTAGTGGCCTGA 59.283 41.667 3.32 0.00 34.65 3.86
2275 2829 5.189736 ACACAATCTAATCTAGTGGCCTGAA 59.810 40.000 3.32 0.00 34.65 3.02
2276 2830 5.757320 CACAATCTAATCTAGTGGCCTGAAG 59.243 44.000 3.32 0.00 0.00 3.02
2277 2831 5.663106 ACAATCTAATCTAGTGGCCTGAAGA 59.337 40.000 3.32 3.95 0.00 2.87
2278 2832 5.799827 ATCTAATCTAGTGGCCTGAAGAC 57.200 43.478 3.32 0.00 0.00 3.01
2279 2833 3.961408 TCTAATCTAGTGGCCTGAAGACC 59.039 47.826 3.32 0.00 0.00 3.85
2280 2834 2.254152 ATCTAGTGGCCTGAAGACCA 57.746 50.000 3.32 0.00 0.00 4.02
2281 2835 2.254152 TCTAGTGGCCTGAAGACCAT 57.746 50.000 3.32 0.00 38.46 3.55
2282 2836 2.111384 TCTAGTGGCCTGAAGACCATC 58.889 52.381 3.32 0.00 38.46 3.51
2283 2837 1.139853 CTAGTGGCCTGAAGACCATCC 59.860 57.143 3.32 0.00 38.46 3.51
2284 2838 1.450312 GTGGCCTGAAGACCATCCG 60.450 63.158 3.32 0.00 38.46 4.18
2285 2839 2.190578 GGCCTGAAGACCATCCGG 59.809 66.667 0.00 0.00 38.77 5.14
2294 2848 3.395630 ACCATCCGGTTTAGGCGT 58.604 55.556 0.00 0.00 46.31 5.68
2295 2849 1.219935 ACCATCCGGTTTAGGCGTC 59.780 57.895 0.00 0.00 46.31 5.19
2296 2850 1.523032 CCATCCGGTTTAGGCGTCC 60.523 63.158 0.00 0.00 0.00 4.79
2297 2851 1.523032 CATCCGGTTTAGGCGTCCC 60.523 63.158 0.00 0.00 0.00 4.46
2298 2852 1.991167 ATCCGGTTTAGGCGTCCCA 60.991 57.895 0.00 0.00 0.00 4.37
2299 2853 1.342672 ATCCGGTTTAGGCGTCCCAT 61.343 55.000 0.00 0.00 0.00 4.00
2300 2854 0.687098 TCCGGTTTAGGCGTCCCATA 60.687 55.000 0.00 0.00 0.00 2.74
2301 2855 0.178533 CCGGTTTAGGCGTCCCATAA 59.821 55.000 0.00 0.00 0.00 1.90
2302 2856 1.292992 CGGTTTAGGCGTCCCATAAC 58.707 55.000 0.00 0.00 0.00 1.89
2303 2857 1.405797 CGGTTTAGGCGTCCCATAACA 60.406 52.381 0.00 0.00 31.83 2.41
2304 2858 2.743838 CGGTTTAGGCGTCCCATAACAT 60.744 50.000 0.00 0.00 31.83 2.71
2305 2859 2.616842 GGTTTAGGCGTCCCATAACATG 59.383 50.000 0.00 0.00 31.83 3.21
2306 2860 1.961793 TTAGGCGTCCCATAACATGC 58.038 50.000 0.00 0.00 0.00 4.06
2307 2861 0.833949 TAGGCGTCCCATAACATGCA 59.166 50.000 0.00 0.00 0.00 3.96
2308 2862 0.748005 AGGCGTCCCATAACATGCAC 60.748 55.000 0.00 0.00 0.00 4.57
2309 2863 1.724582 GGCGTCCCATAACATGCACC 61.725 60.000 0.00 0.00 0.00 5.01
2310 2864 2.013807 CGTCCCATAACATGCACCG 58.986 57.895 0.00 0.00 0.00 4.94
2311 2865 1.727467 GTCCCATAACATGCACCGC 59.273 57.895 0.00 0.00 0.00 5.68
2312 2866 1.453015 TCCCATAACATGCACCGCC 60.453 57.895 0.00 0.00 0.00 6.13
2313 2867 1.453745 CCCATAACATGCACCGCCT 60.454 57.895 0.00 0.00 0.00 5.52
2314 2868 0.179032 CCCATAACATGCACCGCCTA 60.179 55.000 0.00 0.00 0.00 3.93
2315 2869 0.944386 CCATAACATGCACCGCCTAC 59.056 55.000 0.00 0.00 0.00 3.18
2316 2870 0.581529 CATAACATGCACCGCCTACG 59.418 55.000 0.00 0.00 39.67 3.51
2317 2871 1.157870 ATAACATGCACCGCCTACGC 61.158 55.000 0.00 0.00 38.22 4.42
2318 2872 2.508586 TAACATGCACCGCCTACGCA 62.509 55.000 0.00 0.00 40.50 5.24
2319 2873 3.864686 CATGCACCGCCTACGCAC 61.865 66.667 0.00 0.00 38.73 5.34
2325 2879 3.884350 CCGCCTACGCACGCTCTA 61.884 66.667 0.00 0.00 38.22 2.43
2326 2880 2.352457 CGCCTACGCACGCTCTAG 60.352 66.667 0.00 0.00 34.03 2.43
2327 2881 2.026301 GCCTACGCACGCTCTAGG 59.974 66.667 5.62 5.62 34.03 3.02
2328 2882 2.478890 GCCTACGCACGCTCTAGGA 61.479 63.158 11.83 0.00 34.03 2.94
2329 2883 1.797211 GCCTACGCACGCTCTAGGAT 61.797 60.000 11.83 0.00 34.03 3.24
2330 2884 0.238817 CCTACGCACGCTCTAGGATC 59.761 60.000 4.39 0.00 30.11 3.36
2331 2885 1.231221 CTACGCACGCTCTAGGATCT 58.769 55.000 0.00 0.00 0.00 2.75
2332 2886 0.945099 TACGCACGCTCTAGGATCTG 59.055 55.000 0.00 0.00 0.00 2.90
2333 2887 1.659954 CGCACGCTCTAGGATCTGC 60.660 63.158 0.00 0.00 0.00 4.26
2334 2888 1.300542 GCACGCTCTAGGATCTGCC 60.301 63.158 0.00 0.00 0.00 4.85
2335 2889 1.007964 CACGCTCTAGGATCTGCCG 60.008 63.158 0.00 0.00 43.43 5.69
2336 2890 1.152943 ACGCTCTAGGATCTGCCGA 60.153 57.895 0.00 0.00 43.43 5.54
2337 2891 0.538516 ACGCTCTAGGATCTGCCGAT 60.539 55.000 0.00 0.00 43.43 4.18
2338 2892 0.109365 CGCTCTAGGATCTGCCGATG 60.109 60.000 0.00 0.00 43.43 3.84
2339 2893 0.389687 GCTCTAGGATCTGCCGATGC 60.390 60.000 1.22 1.22 43.43 3.91
2340 2894 0.246086 CTCTAGGATCTGCCGATGCC 59.754 60.000 6.01 2.85 43.43 4.40
2341 2895 0.469892 TCTAGGATCTGCCGATGCCA 60.470 55.000 6.01 0.00 43.43 4.92
2342 2896 0.612229 CTAGGATCTGCCGATGCCAT 59.388 55.000 6.01 0.00 43.43 4.40
2343 2897 0.610174 TAGGATCTGCCGATGCCATC 59.390 55.000 6.01 0.00 43.43 3.51
2344 2898 1.126329 AGGATCTGCCGATGCCATCT 61.126 55.000 6.01 0.00 43.43 2.90
2345 2899 0.250640 GGATCTGCCGATGCCATCTT 60.251 55.000 2.75 0.00 36.33 2.40
2346 2900 1.155042 GATCTGCCGATGCCATCTTC 58.845 55.000 2.75 0.00 36.33 2.87
2347 2901 0.250640 ATCTGCCGATGCCATCTTCC 60.251 55.000 2.75 0.00 36.33 3.46
2348 2902 2.203056 TGCCGATGCCATCTTCCG 60.203 61.111 2.75 0.00 36.33 4.30
2349 2903 3.654020 GCCGATGCCATCTTCCGC 61.654 66.667 2.75 0.00 0.00 5.54
2350 2904 2.974698 CCGATGCCATCTTCCGCC 60.975 66.667 2.75 0.00 0.00 6.13
2351 2905 2.203056 CGATGCCATCTTCCGCCA 60.203 61.111 2.75 0.00 0.00 5.69
2352 2906 1.598962 CGATGCCATCTTCCGCCAT 60.599 57.895 2.75 0.00 0.00 4.40
2353 2907 1.572085 CGATGCCATCTTCCGCCATC 61.572 60.000 2.75 0.00 0.00 3.51
2354 2908 1.228367 ATGCCATCTTCCGCCATCC 60.228 57.895 0.00 0.00 0.00 3.51
2355 2909 2.595754 GCCATCTTCCGCCATCCC 60.596 66.667 0.00 0.00 0.00 3.85
2356 2910 2.281070 CCATCTTCCGCCATCCCG 60.281 66.667 0.00 0.00 0.00 5.14
2357 2911 2.505982 CATCTTCCGCCATCCCGT 59.494 61.111 0.00 0.00 0.00 5.28
2358 2912 1.595382 CATCTTCCGCCATCCCGTC 60.595 63.158 0.00 0.00 0.00 4.79
2359 2913 1.762460 ATCTTCCGCCATCCCGTCT 60.762 57.895 0.00 0.00 0.00 4.18
2360 2914 1.338136 ATCTTCCGCCATCCCGTCTT 61.338 55.000 0.00 0.00 0.00 3.01
2361 2915 1.521681 CTTCCGCCATCCCGTCTTC 60.522 63.158 0.00 0.00 0.00 2.87
2362 2916 2.238847 CTTCCGCCATCCCGTCTTCA 62.239 60.000 0.00 0.00 0.00 3.02
2363 2917 2.202932 CCGCCATCCCGTCTTCAG 60.203 66.667 0.00 0.00 0.00 3.02
2364 2918 2.202932 CGCCATCCCGTCTTCAGG 60.203 66.667 0.00 0.00 0.00 3.86
2365 2919 2.721167 CGCCATCCCGTCTTCAGGA 61.721 63.158 0.00 0.00 36.36 3.86
2366 2920 1.144936 GCCATCCCGTCTTCAGGAG 59.855 63.158 0.00 0.00 35.08 3.69
2367 2921 1.826024 CCATCCCGTCTTCAGGAGG 59.174 63.158 0.00 0.00 35.08 4.30
2368 2922 0.687757 CCATCCCGTCTTCAGGAGGA 60.688 60.000 0.00 0.00 36.00 3.71
2369 2923 1.195115 CATCCCGTCTTCAGGAGGAA 58.805 55.000 0.00 0.00 36.00 3.36
2370 2924 1.134670 CATCCCGTCTTCAGGAGGAAC 60.135 57.143 0.00 0.00 36.00 3.62
2372 2926 1.356738 TCCCGTCTTCAGGAGGAACTA 59.643 52.381 0.00 0.00 41.55 2.24
2373 2927 1.751924 CCCGTCTTCAGGAGGAACTAG 59.248 57.143 0.00 0.00 41.55 2.57
2374 2928 1.135333 CCGTCTTCAGGAGGAACTAGC 59.865 57.143 0.00 0.00 41.55 3.42
2375 2929 1.819288 CGTCTTCAGGAGGAACTAGCA 59.181 52.381 0.00 0.00 41.55 3.49
2376 2930 2.231478 CGTCTTCAGGAGGAACTAGCAA 59.769 50.000 0.00 0.00 41.55 3.91
2377 2931 3.306088 CGTCTTCAGGAGGAACTAGCAAA 60.306 47.826 0.00 0.00 41.55 3.68
2378 2932 3.997681 GTCTTCAGGAGGAACTAGCAAAC 59.002 47.826 0.00 0.00 41.55 2.93
2379 2933 3.646162 TCTTCAGGAGGAACTAGCAAACA 59.354 43.478 0.00 0.00 41.55 2.83
2380 2934 4.287067 TCTTCAGGAGGAACTAGCAAACAT 59.713 41.667 0.00 0.00 41.55 2.71
2381 2935 3.942829 TCAGGAGGAACTAGCAAACATG 58.057 45.455 0.00 0.00 41.55 3.21
2382 2936 3.327757 TCAGGAGGAACTAGCAAACATGT 59.672 43.478 0.00 0.00 41.55 3.21
2383 2937 3.686726 CAGGAGGAACTAGCAAACATGTC 59.313 47.826 0.00 0.00 41.55 3.06
2384 2938 3.010420 GGAGGAACTAGCAAACATGTCC 58.990 50.000 0.00 0.00 41.55 4.02
2385 2939 2.673368 GAGGAACTAGCAAACATGTCCG 59.327 50.000 0.00 0.00 41.55 4.79
2386 2940 2.038557 AGGAACTAGCAAACATGTCCGT 59.961 45.455 0.00 0.00 36.02 4.69
2387 2941 2.159627 GGAACTAGCAAACATGTCCGTG 59.840 50.000 0.00 0.00 0.00 4.94
2388 2942 1.156736 ACTAGCAAACATGTCCGTGC 58.843 50.000 17.10 17.10 37.26 5.34
2389 2943 0.095245 CTAGCAAACATGTCCGTGCG 59.905 55.000 18.16 6.56 41.90 5.34
2390 2944 0.601576 TAGCAAACATGTCCGTGCGT 60.602 50.000 18.16 11.87 41.90 5.24
2391 2945 1.008995 GCAAACATGTCCGTGCGTT 60.009 52.632 11.86 0.00 0.00 4.84
2392 2946 1.268113 GCAAACATGTCCGTGCGTTG 61.268 55.000 11.86 6.59 0.00 4.10
2393 2947 1.008995 AAACATGTCCGTGCGTTGC 60.009 52.632 0.00 0.00 0.00 4.17
2394 2948 1.719725 AAACATGTCCGTGCGTTGCA 61.720 50.000 0.00 0.00 35.60 4.08
2395 2949 1.719725 AACATGTCCGTGCGTTGCAA 61.720 50.000 0.00 0.00 41.47 4.08
2396 2950 1.725625 CATGTCCGTGCGTTGCAAC 60.726 57.895 19.89 19.89 41.47 4.17
2426 2980 5.852282 AAACAATCACACCTATAATGGCC 57.148 39.130 0.00 0.00 0.00 5.36
2427 2981 3.832527 ACAATCACACCTATAATGGCCC 58.167 45.455 0.00 0.00 0.00 5.80
2428 2982 3.204158 ACAATCACACCTATAATGGCCCA 59.796 43.478 0.00 0.00 0.00 5.36
2429 2983 4.214310 CAATCACACCTATAATGGCCCAA 58.786 43.478 0.00 0.00 0.00 4.12
2430 2984 3.576078 TCACACCTATAATGGCCCAAG 57.424 47.619 0.00 0.00 0.00 3.61
2431 2985 3.119319 TCACACCTATAATGGCCCAAGA 58.881 45.455 0.00 0.00 0.00 3.02
2432 2986 3.118038 TCACACCTATAATGGCCCAAGAC 60.118 47.826 0.00 0.00 0.00 3.01
2433 2987 2.174854 ACACCTATAATGGCCCAAGACC 59.825 50.000 0.00 0.00 0.00 3.85
2434 2988 2.443255 CACCTATAATGGCCCAAGACCT 59.557 50.000 0.00 0.00 0.00 3.85
2435 2989 2.711547 ACCTATAATGGCCCAAGACCTC 59.288 50.000 0.00 0.00 0.00 3.85
2436 2990 2.982488 CCTATAATGGCCCAAGACCTCT 59.018 50.000 0.00 0.00 0.00 3.69
2437 2991 3.008485 CCTATAATGGCCCAAGACCTCTC 59.992 52.174 0.00 0.00 0.00 3.20
2438 2992 1.965414 TAATGGCCCAAGACCTCTCA 58.035 50.000 0.00 0.00 0.00 3.27
2439 2993 0.622665 AATGGCCCAAGACCTCTCAG 59.377 55.000 0.00 0.00 0.00 3.35
2440 2994 0.548682 ATGGCCCAAGACCTCTCAGT 60.549 55.000 0.00 0.00 0.00 3.41
2441 2995 1.194781 TGGCCCAAGACCTCTCAGTC 61.195 60.000 0.00 0.00 37.01 3.51
2442 2996 1.599576 GCCCAAGACCTCTCAGTCC 59.400 63.158 0.00 0.00 37.49 3.85
2443 2997 1.194781 GCCCAAGACCTCTCAGTCCA 61.195 60.000 0.00 0.00 37.49 4.02
2444 2998 0.901124 CCCAAGACCTCTCAGTCCAG 59.099 60.000 0.00 0.00 37.49 3.86
2445 2999 0.248843 CCAAGACCTCTCAGTCCAGC 59.751 60.000 0.00 0.00 37.49 4.85
2446 3000 1.265236 CAAGACCTCTCAGTCCAGCT 58.735 55.000 0.00 0.00 37.49 4.24
2447 3001 1.204467 CAAGACCTCTCAGTCCAGCTC 59.796 57.143 0.00 0.00 37.49 4.09
2448 3002 0.407528 AGACCTCTCAGTCCAGCTCA 59.592 55.000 0.00 0.00 37.49 4.26
2449 3003 1.006998 AGACCTCTCAGTCCAGCTCAT 59.993 52.381 0.00 0.00 37.49 2.90
2450 3004 2.243478 AGACCTCTCAGTCCAGCTCATA 59.757 50.000 0.00 0.00 37.49 2.15
2451 3005 3.117169 AGACCTCTCAGTCCAGCTCATAT 60.117 47.826 0.00 0.00 37.49 1.78
2452 3006 3.640967 GACCTCTCAGTCCAGCTCATATT 59.359 47.826 0.00 0.00 0.00 1.28
2453 3007 4.036518 ACCTCTCAGTCCAGCTCATATTT 58.963 43.478 0.00 0.00 0.00 1.40
2454 3008 4.472833 ACCTCTCAGTCCAGCTCATATTTT 59.527 41.667 0.00 0.00 0.00 1.82
2455 3009 5.055812 CCTCTCAGTCCAGCTCATATTTTC 58.944 45.833 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 1.407618 TCAACGTCGGATCATACCTGG 59.592 52.381 0.00 0.00 0.00 4.45
41 42 2.093973 AGCTCTTTCAACGTCGGATCAT 60.094 45.455 0.00 0.00 0.00 2.45
74 75 4.378046 GCGAATGATACAAAACGACTTGGT 60.378 41.667 0.00 0.00 0.00 3.67
78 79 3.124636 GTGGCGAATGATACAAAACGACT 59.875 43.478 0.00 0.00 0.00 4.18
123 124 1.515521 CCCGTGGGAAAGAAGTGCAC 61.516 60.000 9.40 9.40 37.50 4.57
140 141 2.649816 AGAACAAGGGATATATGGCCCC 59.350 50.000 0.00 3.28 45.89 5.80
141 142 4.082125 CAAGAACAAGGGATATATGGCCC 58.918 47.826 0.00 6.61 45.04 5.80
153 154 3.125316 TCGTCGGTTAACAAGAACAAGG 58.875 45.455 8.10 0.00 0.00 3.61
186 190 1.149401 GGGCAAGGACCTGATAGCC 59.851 63.158 15.58 15.58 41.29 3.93
187 191 1.424638 TAGGGCAAGGACCTGATAGC 58.575 55.000 0.00 0.00 43.53 2.97
188 192 3.648067 TGAATAGGGCAAGGACCTGATAG 59.352 47.826 0.00 0.00 43.53 2.08
189 193 3.664320 TGAATAGGGCAAGGACCTGATA 58.336 45.455 0.00 0.00 43.53 2.15
230 234 4.757149 GGTAACTTCAGTGTGAAATCTGCT 59.243 41.667 0.00 0.00 35.73 4.24
249 253 8.271458 TGACATGGAGCTAGATAAAAATGGTAA 58.729 33.333 0.00 0.00 0.00 2.85
260 264 8.621126 AAGGATTATATGACATGGAGCTAGAT 57.379 34.615 0.00 0.00 0.00 1.98
264 268 7.619050 CACTAAGGATTATATGACATGGAGCT 58.381 38.462 0.00 0.00 0.00 4.09
266 270 7.619050 AGCACTAAGGATTATATGACATGGAG 58.381 38.462 0.00 0.00 0.00 3.86
289 293 5.585047 ACCAATAAATCAAGACGAAGGTAGC 59.415 40.000 0.00 0.00 0.00 3.58
360 364 7.473735 TCCTTTTGGTGACATGCATTATTAA 57.526 32.000 0.00 0.00 42.32 1.40
407 443 5.361285 TGGTTGTGCTAAACTTTAACCACAT 59.639 36.000 12.16 0.00 41.68 3.21
409 445 5.251601 TGGTTGTGCTAAACTTTAACCAC 57.748 39.130 0.00 4.32 41.68 4.16
412 448 5.761165 TCCTGGTTGTGCTAAACTTTAAC 57.239 39.130 0.00 0.00 0.00 2.01
429 465 3.744942 CGATTGAGACATAGCAATCCTGG 59.255 47.826 0.00 0.00 44.59 4.45
431 467 4.343526 AGTCGATTGAGACATAGCAATCCT 59.656 41.667 0.00 0.00 44.59 3.24
444 480 4.998788 TGGTTATGTCTCAGTCGATTGAG 58.001 43.478 27.00 27.00 44.74 3.02
454 490 5.708697 TCGTCTAAGACTTGGTTATGTCTCA 59.291 40.000 0.00 0.00 39.58 3.27
464 500 7.653713 ACAAATATAGCATCGTCTAAGACTTGG 59.346 37.037 0.00 0.00 0.00 3.61
475 511 7.968956 CGTAAGATCCTACAAATATAGCATCGT 59.031 37.037 2.51 0.00 43.02 3.73
540 576 9.263446 ACCAGGTCTAAGTTAAGTGATATAACA 57.737 33.333 0.00 0.00 36.04 2.41
546 582 9.449719 CATTTAACCAGGTCTAAGTTAAGTGAT 57.550 33.333 15.34 4.26 42.01 3.06
547 583 8.434392 ACATTTAACCAGGTCTAAGTTAAGTGA 58.566 33.333 21.24 6.68 42.01 3.41
548 584 8.617290 ACATTTAACCAGGTCTAAGTTAAGTG 57.383 34.615 17.06 17.06 43.58 3.16
549 585 8.434392 TGACATTTAACCAGGTCTAAGTTAAGT 58.566 33.333 0.00 0.00 37.30 2.24
550 586 8.842358 TGACATTTAACCAGGTCTAAGTTAAG 57.158 34.615 0.00 0.00 37.30 1.85
551 587 8.434392 ACTGACATTTAACCAGGTCTAAGTTAA 58.566 33.333 0.00 0.00 34.92 2.01
552 588 7.970102 ACTGACATTTAACCAGGTCTAAGTTA 58.030 34.615 0.00 0.00 32.52 2.24
553 589 6.838382 ACTGACATTTAACCAGGTCTAAGTT 58.162 36.000 0.00 0.00 32.52 2.66
554 590 6.435292 ACTGACATTTAACCAGGTCTAAGT 57.565 37.500 0.00 0.00 32.52 2.24
555 591 5.577164 CGACTGACATTTAACCAGGTCTAAG 59.423 44.000 0.00 0.00 32.52 2.18
556 592 5.244402 TCGACTGACATTTAACCAGGTCTAA 59.756 40.000 0.00 0.00 32.52 2.10
557 593 4.768448 TCGACTGACATTTAACCAGGTCTA 59.232 41.667 0.00 0.00 32.52 2.59
558 594 3.576982 TCGACTGACATTTAACCAGGTCT 59.423 43.478 0.00 0.00 32.52 3.85
559 595 3.678548 GTCGACTGACATTTAACCAGGTC 59.321 47.826 8.70 0.00 44.82 3.85
560 596 3.660865 GTCGACTGACATTTAACCAGGT 58.339 45.455 8.70 0.00 44.82 4.00
574 610 2.417239 GTGTCTAGGTCTCAGTCGACTG 59.583 54.545 34.76 34.76 45.08 3.51
575 611 2.038689 TGTGTCTAGGTCTCAGTCGACT 59.961 50.000 13.58 13.58 34.38 4.18
576 612 2.160022 GTGTGTCTAGGTCTCAGTCGAC 59.840 54.545 7.70 7.70 0.00 4.20
577 613 2.424557 GTGTGTCTAGGTCTCAGTCGA 58.575 52.381 0.00 0.00 0.00 4.20
578 614 1.469308 GGTGTGTCTAGGTCTCAGTCG 59.531 57.143 0.00 0.00 0.00 4.18
579 615 1.819903 GGGTGTGTCTAGGTCTCAGTC 59.180 57.143 0.00 0.00 0.00 3.51
580 616 1.429687 AGGGTGTGTCTAGGTCTCAGT 59.570 52.381 0.00 0.00 0.00 3.41
581 617 2.223803 AGGGTGTGTCTAGGTCTCAG 57.776 55.000 0.00 0.00 0.00 3.35
582 618 2.620886 GCTAGGGTGTGTCTAGGTCTCA 60.621 54.545 0.00 0.00 35.85 3.27
583 619 2.025898 GCTAGGGTGTGTCTAGGTCTC 58.974 57.143 0.00 0.00 35.85 3.36
584 620 1.358103 TGCTAGGGTGTGTCTAGGTCT 59.642 52.381 0.00 0.00 35.85 3.85
585 621 1.477295 GTGCTAGGGTGTGTCTAGGTC 59.523 57.143 0.00 0.00 35.85 3.85
586 622 1.203137 TGTGCTAGGGTGTGTCTAGGT 60.203 52.381 0.00 0.00 35.85 3.08
587 623 1.557099 TGTGCTAGGGTGTGTCTAGG 58.443 55.000 0.00 0.00 35.85 3.02
588 624 3.678056 TTTGTGCTAGGGTGTGTCTAG 57.322 47.619 0.00 0.00 37.76 2.43
589 625 4.634012 ATTTTGTGCTAGGGTGTGTCTA 57.366 40.909 0.00 0.00 0.00 2.59
590 626 3.508845 ATTTTGTGCTAGGGTGTGTCT 57.491 42.857 0.00 0.00 0.00 3.41
591 627 4.154195 CAGTATTTTGTGCTAGGGTGTGTC 59.846 45.833 0.00 0.00 0.00 3.67
592 628 4.072131 CAGTATTTTGTGCTAGGGTGTGT 58.928 43.478 0.00 0.00 0.00 3.72
593 629 4.323417 TCAGTATTTTGTGCTAGGGTGTG 58.677 43.478 0.00 0.00 0.00 3.82
594 630 4.565652 CCTCAGTATTTTGTGCTAGGGTGT 60.566 45.833 0.00 0.00 0.00 4.16
595 631 3.941483 CCTCAGTATTTTGTGCTAGGGTG 59.059 47.826 0.00 0.00 0.00 4.61
596 632 3.844211 TCCTCAGTATTTTGTGCTAGGGT 59.156 43.478 0.00 0.00 0.00 4.34
597 633 4.162320 TCTCCTCAGTATTTTGTGCTAGGG 59.838 45.833 0.00 0.00 0.00 3.53
598 634 5.112686 GTCTCCTCAGTATTTTGTGCTAGG 58.887 45.833 0.00 0.00 0.00 3.02
599 635 5.112686 GGTCTCCTCAGTATTTTGTGCTAG 58.887 45.833 0.00 0.00 0.00 3.42
600 636 4.530553 TGGTCTCCTCAGTATTTTGTGCTA 59.469 41.667 0.00 0.00 0.00 3.49
601 637 3.327757 TGGTCTCCTCAGTATTTTGTGCT 59.672 43.478 0.00 0.00 0.00 4.40
602 638 3.674997 TGGTCTCCTCAGTATTTTGTGC 58.325 45.455 0.00 0.00 0.00 4.57
603 639 7.921786 TTATTGGTCTCCTCAGTATTTTGTG 57.078 36.000 0.00 0.00 0.00 3.33
604 640 9.178758 GATTTATTGGTCTCCTCAGTATTTTGT 57.821 33.333 0.00 0.00 0.00 2.83
605 641 8.338259 CGATTTATTGGTCTCCTCAGTATTTTG 58.662 37.037 0.00 0.00 0.00 2.44
606 642 7.499232 CCGATTTATTGGTCTCCTCAGTATTTT 59.501 37.037 0.00 0.00 0.00 1.82
614 650 3.388350 AGTCCCGATTTATTGGTCTCCTC 59.612 47.826 0.00 0.00 0.00 3.71
618 654 3.134804 CCTCAGTCCCGATTTATTGGTCT 59.865 47.826 0.00 0.00 0.00 3.85
631 667 0.747852 GCTGCTACTACCTCAGTCCC 59.252 60.000 0.00 0.00 38.80 4.46
724 777 1.137086 GACTCATGTACCACCGCTCAT 59.863 52.381 0.00 0.00 0.00 2.90
825 886 7.413000 GCGGTAGGTACGTTTAGATATCGATTA 60.413 40.741 1.71 0.00 0.00 1.75
828 893 4.152402 GCGGTAGGTACGTTTAGATATCGA 59.848 45.833 0.00 0.00 0.00 3.59
835 1161 1.135315 TGCAGCGGTAGGTACGTTTAG 60.135 52.381 0.00 0.00 0.00 1.85
842 1168 1.290955 GTGTGTGCAGCGGTAGGTA 59.709 57.895 0.00 0.00 0.00 3.08
878 1208 4.907879 AGAAGGTTCTCTTGTGCTTTTG 57.092 40.909 0.00 0.00 35.50 2.44
913 1249 9.799106 TGGTTAATCAAGAAGAAGAAGAAGAAT 57.201 29.630 0.00 0.00 0.00 2.40
920 1262 6.837312 TGGACTGGTTAATCAAGAAGAAGAA 58.163 36.000 0.00 0.00 0.00 2.52
921 1263 6.433847 TGGACTGGTTAATCAAGAAGAAGA 57.566 37.500 0.00 0.00 0.00 2.87
922 1264 6.936900 TCTTGGACTGGTTAATCAAGAAGAAG 59.063 38.462 0.00 0.00 40.23 2.85
923 1265 6.837312 TCTTGGACTGGTTAATCAAGAAGAA 58.163 36.000 0.00 0.00 40.23 2.52
924 1266 6.433847 TCTTGGACTGGTTAATCAAGAAGA 57.566 37.500 0.00 0.00 40.23 2.87
926 1268 6.837312 TCTTCTTGGACTGGTTAATCAAGAA 58.163 36.000 13.71 13.71 45.97 2.52
927 1269 6.433847 TCTTCTTGGACTGGTTAATCAAGA 57.566 37.500 0.00 0.00 41.07 3.02
928 1270 6.936900 TCTTCTTCTTGGACTGGTTAATCAAG 59.063 38.462 0.00 0.00 36.95 3.02
929 1271 6.837312 TCTTCTTCTTGGACTGGTTAATCAA 58.163 36.000 0.00 0.00 0.00 2.57
930 1272 6.043243 ACTCTTCTTCTTGGACTGGTTAATCA 59.957 38.462 0.00 0.00 0.00 2.57
1387 1743 0.036010 AAGCAGACATCAACTCGGGG 60.036 55.000 0.00 0.00 0.00 5.73
1390 1746 3.320626 TCAAGAAGCAGACATCAACTCG 58.679 45.455 0.00 0.00 0.00 4.18
1411 1767 0.965866 TCCGAAGCATCACCTCGTCT 60.966 55.000 0.00 0.00 0.00 4.18
1607 1993 2.866028 CCAAGAACAGCTGCTCGC 59.134 61.111 15.27 0.15 39.57 5.03
1639 2025 5.860182 CACCAGTCCGTATATTATTACACCG 59.140 44.000 0.00 0.00 0.00 4.94
1655 2043 1.604278 GAAGAACAAGTGCACCAGTCC 59.396 52.381 14.63 0.00 0.00 3.85
1810 2285 5.010112 GCAGTAGCAGTATCAACCTCTCATA 59.990 44.000 0.00 0.00 41.58 2.15
1831 2306 3.129502 CCACGGGTGAGCATGCAG 61.130 66.667 21.98 6.14 0.00 4.41
1853 2334 9.454859 AAGTCCTCTTCCATTATCTAAACAAAG 57.545 33.333 0.00 0.00 0.00 2.77
1908 2394 2.227388 CTGCAGTGGACACAAATCTTCC 59.773 50.000 5.25 0.00 0.00 3.46
1945 2431 4.463186 AGAGCTTTTGTACTCAGGACGTAT 59.537 41.667 0.00 0.00 35.28 3.06
1978 2464 3.647636 AGCCAGGAAGTATCAAGCTAGA 58.352 45.455 0.00 0.00 0.00 2.43
2107 2661 1.997791 AGGTCGGGGGTAATCCTTTTT 59.002 47.619 0.00 0.00 35.33 1.94
2108 2662 1.562942 GAGGTCGGGGGTAATCCTTTT 59.437 52.381 0.00 0.00 35.33 2.27
2109 2663 1.210538 GAGGTCGGGGGTAATCCTTT 58.789 55.000 0.00 0.00 35.33 3.11
2110 2664 0.342313 AGAGGTCGGGGGTAATCCTT 59.658 55.000 0.00 0.00 35.33 3.36
2111 2665 0.398664 CAGAGGTCGGGGGTAATCCT 60.399 60.000 0.00 0.00 35.33 3.24
2112 2666 0.690077 ACAGAGGTCGGGGGTAATCC 60.690 60.000 0.00 0.00 0.00 3.01
2113 2667 2.077687 TACAGAGGTCGGGGGTAATC 57.922 55.000 0.00 0.00 0.00 1.75
2114 2668 2.090943 TGATACAGAGGTCGGGGGTAAT 60.091 50.000 0.00 0.00 0.00 1.89
2115 2669 1.288633 TGATACAGAGGTCGGGGGTAA 59.711 52.381 0.00 0.00 0.00 2.85
2116 2670 0.928505 TGATACAGAGGTCGGGGGTA 59.071 55.000 0.00 0.00 0.00 3.69
2117 2671 0.042131 TTGATACAGAGGTCGGGGGT 59.958 55.000 0.00 0.00 0.00 4.95
2118 2672 0.464452 GTTGATACAGAGGTCGGGGG 59.536 60.000 0.00 0.00 0.00 5.40
2119 2673 1.191535 TGTTGATACAGAGGTCGGGG 58.808 55.000 0.00 0.00 0.00 5.73
2120 2674 2.430694 TCATGTTGATACAGAGGTCGGG 59.569 50.000 0.00 0.00 37.77 5.14
2121 2675 3.801114 TCATGTTGATACAGAGGTCGG 57.199 47.619 0.00 0.00 37.77 4.79
2122 2676 3.492383 GCATCATGTTGATACAGAGGTCG 59.508 47.826 7.98 0.00 34.28 4.79
2123 2677 4.272018 GTGCATCATGTTGATACAGAGGTC 59.728 45.833 7.98 0.00 34.28 3.85
2124 2678 4.194640 GTGCATCATGTTGATACAGAGGT 58.805 43.478 7.98 0.00 34.28 3.85
2125 2679 4.034858 GTGTGCATCATGTTGATACAGAGG 59.965 45.833 7.98 0.00 34.28 3.69
2126 2680 4.260091 CGTGTGCATCATGTTGATACAGAG 60.260 45.833 7.98 5.64 34.28 3.35
2127 2681 3.618150 CGTGTGCATCATGTTGATACAGA 59.382 43.478 7.98 0.00 34.28 3.41
2128 2682 3.786489 GCGTGTGCATCATGTTGATACAG 60.786 47.826 7.98 7.10 42.15 2.74
2129 2683 2.095692 GCGTGTGCATCATGTTGATACA 59.904 45.455 7.98 8.64 42.15 2.29
2130 2684 2.539547 GGCGTGTGCATCATGTTGATAC 60.540 50.000 7.98 6.36 45.35 2.24
2131 2685 1.670295 GGCGTGTGCATCATGTTGATA 59.330 47.619 7.98 0.00 45.35 2.15
2132 2686 0.452987 GGCGTGTGCATCATGTTGAT 59.547 50.000 7.98 0.00 45.35 2.57
2133 2687 0.888285 TGGCGTGTGCATCATGTTGA 60.888 50.000 7.98 0.00 45.35 3.18
2134 2688 0.171679 ATGGCGTGTGCATCATGTTG 59.828 50.000 0.00 0.00 45.35 3.33
2135 2689 0.452987 GATGGCGTGTGCATCATGTT 59.547 50.000 0.00 0.00 45.35 2.71
2136 2690 0.393402 AGATGGCGTGTGCATCATGT 60.393 50.000 0.00 0.00 45.35 3.21
2137 2691 0.736636 AAGATGGCGTGTGCATCATG 59.263 50.000 0.00 0.00 45.35 3.07
2138 2692 1.466856 AAAGATGGCGTGTGCATCAT 58.533 45.000 0.00 0.00 45.35 2.45
2139 2693 2.106477 TAAAGATGGCGTGTGCATCA 57.894 45.000 0.00 0.00 45.35 3.07
2140 2694 3.698029 AATAAAGATGGCGTGTGCATC 57.302 42.857 0.00 0.00 45.35 3.91
2141 2695 5.299028 TGATTAATAAAGATGGCGTGTGCAT 59.701 36.000 0.00 0.00 45.35 3.96
2142 2696 4.637977 TGATTAATAAAGATGGCGTGTGCA 59.362 37.500 0.00 0.00 45.35 4.57
2143 2697 5.168526 TGATTAATAAAGATGGCGTGTGC 57.831 39.130 0.00 0.00 41.71 4.57
2144 2698 8.341903 TGTATTGATTAATAAAGATGGCGTGTG 58.658 33.333 0.00 0.00 30.92 3.82
2145 2699 8.445275 TGTATTGATTAATAAAGATGGCGTGT 57.555 30.769 0.00 0.00 30.92 4.49
2146 2700 9.385902 CTTGTATTGATTAATAAAGATGGCGTG 57.614 33.333 0.00 0.00 30.92 5.34
2147 2701 8.567948 CCTTGTATTGATTAATAAAGATGGCGT 58.432 33.333 10.78 0.00 30.92 5.68
2148 2702 8.783093 TCCTTGTATTGATTAATAAAGATGGCG 58.217 33.333 10.78 0.00 30.92 5.69
2159 2713 8.559536 GCTTCGATTGATCCTTGTATTGATTAA 58.440 33.333 0.00 0.00 0.00 1.40
2160 2714 7.173218 GGCTTCGATTGATCCTTGTATTGATTA 59.827 37.037 0.00 0.00 0.00 1.75
2161 2715 6.016777 GGCTTCGATTGATCCTTGTATTGATT 60.017 38.462 0.00 0.00 0.00 2.57
2162 2716 5.471456 GGCTTCGATTGATCCTTGTATTGAT 59.529 40.000 0.00 0.00 0.00 2.57
2163 2717 4.816385 GGCTTCGATTGATCCTTGTATTGA 59.184 41.667 0.00 0.00 0.00 2.57
2164 2718 4.818546 AGGCTTCGATTGATCCTTGTATTG 59.181 41.667 0.00 0.00 0.00 1.90
2165 2719 5.041191 AGGCTTCGATTGATCCTTGTATT 57.959 39.130 0.00 0.00 0.00 1.89
2166 2720 4.503991 GGAGGCTTCGATTGATCCTTGTAT 60.504 45.833 5.91 0.00 30.37 2.29
2167 2721 3.181465 GGAGGCTTCGATTGATCCTTGTA 60.181 47.826 5.91 0.00 30.37 2.41
2168 2722 2.420687 GGAGGCTTCGATTGATCCTTGT 60.421 50.000 5.91 0.00 30.37 3.16
2169 2723 2.158842 AGGAGGCTTCGATTGATCCTTG 60.159 50.000 5.91 0.00 33.37 3.61
2170 2724 2.122768 AGGAGGCTTCGATTGATCCTT 58.877 47.619 5.91 0.00 33.37 3.36
2171 2725 1.799933 AGGAGGCTTCGATTGATCCT 58.200 50.000 4.41 4.41 32.18 3.24
2172 2726 2.103941 AGAAGGAGGCTTCGATTGATCC 59.896 50.000 0.00 0.00 38.31 3.36
2173 2727 3.467374 AGAAGGAGGCTTCGATTGATC 57.533 47.619 0.00 0.00 38.31 2.92
2174 2728 3.323403 CCTAGAAGGAGGCTTCGATTGAT 59.677 47.826 0.00 0.00 37.67 2.57
2175 2729 2.695666 CCTAGAAGGAGGCTTCGATTGA 59.304 50.000 0.00 0.00 37.67 2.57
2176 2730 3.104843 CCTAGAAGGAGGCTTCGATTG 57.895 52.381 0.00 0.00 37.67 2.67
2185 2739 2.028020 ACTTTGTTCGCCTAGAAGGAGG 60.028 50.000 0.00 0.00 39.95 4.30
2186 2740 3.254892 GACTTTGTTCGCCTAGAAGGAG 58.745 50.000 0.00 0.00 39.95 3.69
2187 2741 2.352421 CGACTTTGTTCGCCTAGAAGGA 60.352 50.000 0.00 0.00 39.95 3.36
2188 2742 1.993370 CGACTTTGTTCGCCTAGAAGG 59.007 52.381 0.00 0.00 39.95 3.46
2197 2751 1.779569 AGGTGTAGCGACTTTGTTCG 58.220 50.000 0.00 0.00 42.15 3.95
2198 2752 3.645884 TGTAGGTGTAGCGACTTTGTTC 58.354 45.455 0.00 0.00 0.00 3.18
2199 2753 3.738830 TGTAGGTGTAGCGACTTTGTT 57.261 42.857 0.00 0.00 0.00 2.83
2200 2754 3.650139 CTTGTAGGTGTAGCGACTTTGT 58.350 45.455 0.00 0.00 0.00 2.83
2201 2755 2.412089 GCTTGTAGGTGTAGCGACTTTG 59.588 50.000 0.00 0.00 0.00 2.77
2202 2756 2.036733 TGCTTGTAGGTGTAGCGACTTT 59.963 45.455 0.00 0.00 37.73 2.66
2203 2757 1.616865 TGCTTGTAGGTGTAGCGACTT 59.383 47.619 0.00 0.00 37.73 3.01
2204 2758 1.254026 TGCTTGTAGGTGTAGCGACT 58.746 50.000 0.00 0.00 37.73 4.18
2205 2759 2.295253 ATGCTTGTAGGTGTAGCGAC 57.705 50.000 0.00 0.00 37.73 5.19
2206 2760 2.756207 TGTATGCTTGTAGGTGTAGCGA 59.244 45.455 0.00 0.00 37.73 4.93
2207 2761 3.116300 CTGTATGCTTGTAGGTGTAGCG 58.884 50.000 0.00 0.00 37.73 4.26
2208 2762 4.386867 TCTGTATGCTTGTAGGTGTAGC 57.613 45.455 0.00 0.00 35.50 3.58
2209 2763 5.750547 CACATCTGTATGCTTGTAGGTGTAG 59.249 44.000 0.00 0.00 33.05 2.74
2210 2764 5.660460 CACATCTGTATGCTTGTAGGTGTA 58.340 41.667 0.00 0.00 33.05 2.90
2211 2765 4.507710 CACATCTGTATGCTTGTAGGTGT 58.492 43.478 0.00 0.00 35.01 4.16
2212 2766 3.310774 GCACATCTGTATGCTTGTAGGTG 59.689 47.826 0.00 0.00 38.84 4.00
2213 2767 3.535561 GCACATCTGTATGCTTGTAGGT 58.464 45.455 0.00 0.00 38.84 3.08
2214 2768 2.874701 GGCACATCTGTATGCTTGTAGG 59.125 50.000 0.00 0.00 41.74 3.18
2215 2769 2.874701 GGGCACATCTGTATGCTTGTAG 59.125 50.000 0.00 0.00 41.74 2.74
2216 2770 2.505407 AGGGCACATCTGTATGCTTGTA 59.495 45.455 0.00 0.00 41.74 2.41
2217 2771 1.283029 AGGGCACATCTGTATGCTTGT 59.717 47.619 0.00 0.00 41.74 3.16
2218 2772 1.674441 CAGGGCACATCTGTATGCTTG 59.326 52.381 0.00 0.00 41.74 4.01
2219 2773 1.283029 ACAGGGCACATCTGTATGCTT 59.717 47.619 0.00 0.00 42.91 3.91
2220 2774 0.914644 ACAGGGCACATCTGTATGCT 59.085 50.000 0.00 0.00 42.91 3.79
2221 2775 1.303309 GACAGGGCACATCTGTATGC 58.697 55.000 0.00 0.00 44.51 3.14
2222 2776 1.807755 CGGACAGGGCACATCTGTATG 60.808 57.143 0.00 0.00 44.51 2.39
2223 2777 0.465705 CGGACAGGGCACATCTGTAT 59.534 55.000 0.00 0.00 44.51 2.29
2224 2778 1.897423 CGGACAGGGCACATCTGTA 59.103 57.895 0.00 0.00 44.51 2.74
2225 2779 2.665000 CGGACAGGGCACATCTGT 59.335 61.111 0.00 0.00 46.82 3.41
2226 2780 2.821366 GCGGACAGGGCACATCTG 60.821 66.667 0.00 0.00 38.16 2.90
2227 2781 3.320879 CTGCGGACAGGGCACATCT 62.321 63.158 0.00 0.00 40.48 2.90
2228 2782 2.803155 TTCTGCGGACAGGGCACATC 62.803 60.000 0.00 0.00 44.59 3.06
2229 2783 2.894257 TTCTGCGGACAGGGCACAT 61.894 57.895 0.00 0.00 44.59 3.21
2230 2784 3.555324 TTCTGCGGACAGGGCACA 61.555 61.111 0.00 0.00 44.59 4.57
2231 2785 3.050275 GTTCTGCGGACAGGGCAC 61.050 66.667 0.00 0.00 44.59 5.01
2232 2786 3.535629 CTGTTCTGCGGACAGGGCA 62.536 63.158 14.03 1.60 44.59 5.36
2233 2787 2.743928 CTGTTCTGCGGACAGGGC 60.744 66.667 14.03 0.00 44.59 5.19
2234 2788 3.059982 TCTGTTCTGCGGACAGGG 58.940 61.111 18.87 2.62 44.59 4.45
2239 2793 1.344438 AGATTGTGTCTGTTCTGCGGA 59.656 47.619 0.00 0.00 35.31 5.54
2240 2794 1.800805 AGATTGTGTCTGTTCTGCGG 58.199 50.000 0.00 0.00 35.31 5.69
2241 2795 4.867047 AGATTAGATTGTGTCTGTTCTGCG 59.133 41.667 0.00 0.00 37.83 5.18
2242 2796 7.009999 CACTAGATTAGATTGTGTCTGTTCTGC 59.990 40.741 0.00 0.00 37.83 4.26
2243 2797 7.490725 CCACTAGATTAGATTGTGTCTGTTCTG 59.509 40.741 0.00 0.00 37.83 3.02
2244 2798 7.551585 CCACTAGATTAGATTGTGTCTGTTCT 58.448 38.462 0.00 0.00 37.83 3.01
2245 2799 6.256757 GCCACTAGATTAGATTGTGTCTGTTC 59.743 42.308 0.00 0.00 37.83 3.18
2246 2800 6.109359 GCCACTAGATTAGATTGTGTCTGTT 58.891 40.000 0.00 0.00 37.83 3.16
2247 2801 5.395768 GGCCACTAGATTAGATTGTGTCTGT 60.396 44.000 0.00 0.00 37.83 3.41
2248 2802 5.053145 GGCCACTAGATTAGATTGTGTCTG 58.947 45.833 0.00 0.00 37.83 3.51
2249 2803 4.965532 AGGCCACTAGATTAGATTGTGTCT 59.034 41.667 5.01 0.00 41.11 3.41
2250 2804 5.053145 CAGGCCACTAGATTAGATTGTGTC 58.947 45.833 5.01 0.00 0.00 3.67
2251 2805 4.716784 TCAGGCCACTAGATTAGATTGTGT 59.283 41.667 5.01 0.00 0.00 3.72
2252 2806 5.282055 TCAGGCCACTAGATTAGATTGTG 57.718 43.478 5.01 0.00 0.00 3.33
2253 2807 5.663106 TCTTCAGGCCACTAGATTAGATTGT 59.337 40.000 5.01 0.00 0.00 2.71
2254 2808 5.988561 GTCTTCAGGCCACTAGATTAGATTG 59.011 44.000 5.01 0.00 0.00 2.67
2255 2809 5.071115 GGTCTTCAGGCCACTAGATTAGATT 59.929 44.000 5.01 0.00 0.00 2.40
2256 2810 4.591072 GGTCTTCAGGCCACTAGATTAGAT 59.409 45.833 5.01 0.00 0.00 1.98
2257 2811 3.961408 GGTCTTCAGGCCACTAGATTAGA 59.039 47.826 5.01 0.00 0.00 2.10
2258 2812 3.706594 TGGTCTTCAGGCCACTAGATTAG 59.293 47.826 5.01 0.00 0.00 1.73
2259 2813 3.719871 TGGTCTTCAGGCCACTAGATTA 58.280 45.455 5.01 0.00 0.00 1.75
2260 2814 2.551270 TGGTCTTCAGGCCACTAGATT 58.449 47.619 5.01 0.00 0.00 2.40
2261 2815 2.254152 TGGTCTTCAGGCCACTAGAT 57.746 50.000 5.01 0.00 0.00 1.98
2262 2816 2.111384 GATGGTCTTCAGGCCACTAGA 58.889 52.381 5.01 0.28 37.62 2.43
2263 2817 1.139853 GGATGGTCTTCAGGCCACTAG 59.860 57.143 5.01 0.00 37.62 2.57
2264 2818 1.204146 GGATGGTCTTCAGGCCACTA 58.796 55.000 5.01 0.00 37.62 2.74
2265 2819 1.903877 CGGATGGTCTTCAGGCCACT 61.904 60.000 5.01 0.00 37.62 4.00
2266 2820 1.450312 CGGATGGTCTTCAGGCCAC 60.450 63.158 5.01 0.00 37.62 5.01
2267 2821 2.669133 CCGGATGGTCTTCAGGCCA 61.669 63.158 5.01 1.75 39.33 5.36
2268 2822 2.190578 CCGGATGGTCTTCAGGCC 59.809 66.667 0.00 0.00 0.00 5.19
2278 2832 1.523032 GGACGCCTAAACCGGATGG 60.523 63.158 9.46 5.37 42.84 3.51
2279 2833 1.523032 GGGACGCCTAAACCGGATG 60.523 63.158 9.46 0.00 0.00 3.51
2280 2834 1.342672 ATGGGACGCCTAAACCGGAT 61.343 55.000 9.46 0.00 0.00 4.18
2281 2835 0.687098 TATGGGACGCCTAAACCGGA 60.687 55.000 9.46 0.00 0.00 5.14
2282 2836 0.178533 TTATGGGACGCCTAAACCGG 59.821 55.000 0.00 0.00 0.00 5.28
2283 2837 1.292992 GTTATGGGACGCCTAAACCG 58.707 55.000 0.00 0.00 0.00 4.44
2284 2838 2.406596 TGTTATGGGACGCCTAAACC 57.593 50.000 0.00 0.00 0.00 3.27
2285 2839 2.032924 GCATGTTATGGGACGCCTAAAC 59.967 50.000 0.00 0.00 0.00 2.01
2286 2840 2.294074 GCATGTTATGGGACGCCTAAA 58.706 47.619 0.00 0.00 0.00 1.85
2287 2841 1.210722 TGCATGTTATGGGACGCCTAA 59.789 47.619 0.00 0.00 0.00 2.69
2288 2842 0.833949 TGCATGTTATGGGACGCCTA 59.166 50.000 0.00 0.00 0.00 3.93
2289 2843 0.748005 GTGCATGTTATGGGACGCCT 60.748 55.000 0.00 0.00 0.00 5.52
2290 2844 1.724582 GGTGCATGTTATGGGACGCC 61.725 60.000 0.00 0.00 0.00 5.68
2291 2845 1.727467 GGTGCATGTTATGGGACGC 59.273 57.895 0.00 0.00 0.00 5.19
2292 2846 2.013807 CGGTGCATGTTATGGGACG 58.986 57.895 0.00 0.00 0.00 4.79
2293 2847 1.724582 GGCGGTGCATGTTATGGGAC 61.725 60.000 0.00 0.00 0.00 4.46
2294 2848 1.453015 GGCGGTGCATGTTATGGGA 60.453 57.895 0.00 0.00 0.00 4.37
2295 2849 0.179032 TAGGCGGTGCATGTTATGGG 60.179 55.000 0.00 0.00 0.00 4.00
2296 2850 0.944386 GTAGGCGGTGCATGTTATGG 59.056 55.000 0.00 0.00 0.00 2.74
2297 2851 0.581529 CGTAGGCGGTGCATGTTATG 59.418 55.000 0.00 0.00 0.00 1.90
2298 2852 1.157870 GCGTAGGCGGTGCATGTTAT 61.158 55.000 0.00 0.00 38.78 1.89
2299 2853 1.812093 GCGTAGGCGGTGCATGTTA 60.812 57.895 0.00 0.00 38.78 2.41
2300 2854 3.124921 GCGTAGGCGGTGCATGTT 61.125 61.111 0.00 0.00 38.78 2.71
2301 2855 4.386951 TGCGTAGGCGGTGCATGT 62.387 61.111 2.53 0.00 44.10 3.21
2302 2856 3.864686 GTGCGTAGGCGGTGCATG 61.865 66.667 2.53 0.00 44.10 4.06
2308 2862 3.808771 CTAGAGCGTGCGTAGGCGG 62.809 68.421 12.42 0.00 44.10 6.13
2309 2863 2.352457 CTAGAGCGTGCGTAGGCG 60.352 66.667 12.42 0.00 44.10 5.52
2310 2864 1.797211 ATCCTAGAGCGTGCGTAGGC 61.797 60.000 10.33 10.33 34.39 3.93
2311 2865 0.238817 GATCCTAGAGCGTGCGTAGG 59.761 60.000 14.00 14.00 35.53 3.18
2312 2866 1.069568 CAGATCCTAGAGCGTGCGTAG 60.070 57.143 0.00 0.00 0.00 3.51
2313 2867 0.945099 CAGATCCTAGAGCGTGCGTA 59.055 55.000 0.00 0.00 0.00 4.42
2314 2868 1.730487 CAGATCCTAGAGCGTGCGT 59.270 57.895 0.00 0.00 0.00 5.24
2315 2869 1.659954 GCAGATCCTAGAGCGTGCG 60.660 63.158 0.00 0.00 0.00 5.34
2316 2870 1.300542 GGCAGATCCTAGAGCGTGC 60.301 63.158 0.00 0.00 0.00 5.34
2317 2871 1.007964 CGGCAGATCCTAGAGCGTG 60.008 63.158 0.00 0.00 0.00 5.34
2318 2872 0.538516 ATCGGCAGATCCTAGAGCGT 60.539 55.000 0.00 0.00 29.44 5.07
2319 2873 0.109365 CATCGGCAGATCCTAGAGCG 60.109 60.000 0.00 0.00 34.23 5.03
2320 2874 0.389687 GCATCGGCAGATCCTAGAGC 60.390 60.000 0.00 0.00 40.72 4.09
2321 2875 0.246086 GGCATCGGCAGATCCTAGAG 59.754 60.000 0.00 0.00 43.71 2.43
2322 2876 0.469892 TGGCATCGGCAGATCCTAGA 60.470 55.000 13.39 0.00 43.71 2.43
2323 2877 0.612229 ATGGCATCGGCAGATCCTAG 59.388 55.000 13.39 0.00 42.43 3.02
2324 2878 0.610174 GATGGCATCGGCAGATCCTA 59.390 55.000 12.40 0.00 42.43 2.94
2325 2879 1.126329 AGATGGCATCGGCAGATCCT 61.126 55.000 21.01 0.00 42.43 3.24
2326 2880 0.250640 AAGATGGCATCGGCAGATCC 60.251 55.000 21.01 2.64 42.43 3.36
2327 2881 1.155042 GAAGATGGCATCGGCAGATC 58.845 55.000 21.01 10.32 42.43 2.75
2328 2882 0.250640 GGAAGATGGCATCGGCAGAT 60.251 55.000 21.01 0.10 42.43 2.90
2329 2883 1.146930 GGAAGATGGCATCGGCAGA 59.853 57.895 21.01 0.00 42.43 4.26
2330 2884 2.249535 CGGAAGATGGCATCGGCAG 61.250 63.158 21.01 13.67 42.43 4.85
2331 2885 2.203056 CGGAAGATGGCATCGGCA 60.203 61.111 21.01 0.00 43.71 5.69
2332 2886 3.654020 GCGGAAGATGGCATCGGC 61.654 66.667 21.01 18.08 40.13 5.54
2333 2887 2.974698 GGCGGAAGATGGCATCGG 60.975 66.667 21.01 12.89 0.00 4.18
2334 2888 2.203056 TGGCGGAAGATGGCATCG 60.203 61.111 21.01 11.55 36.93 3.84
2337 2891 2.192979 GGATGGCGGAAGATGGCA 59.807 61.111 0.00 0.00 46.52 4.92
2338 2892 2.595754 GGGATGGCGGAAGATGGC 60.596 66.667 0.00 0.00 0.00 4.40
2339 2893 2.281070 CGGGATGGCGGAAGATGG 60.281 66.667 0.00 0.00 0.00 3.51
2340 2894 1.595382 GACGGGATGGCGGAAGATG 60.595 63.158 0.00 0.00 0.00 2.90
2341 2895 1.338136 AAGACGGGATGGCGGAAGAT 61.338 55.000 0.00 0.00 0.00 2.40
2342 2896 1.956629 GAAGACGGGATGGCGGAAGA 61.957 60.000 0.00 0.00 0.00 2.87
2343 2897 1.521681 GAAGACGGGATGGCGGAAG 60.522 63.158 0.00 0.00 0.00 3.46
2344 2898 2.238847 CTGAAGACGGGATGGCGGAA 62.239 60.000 0.00 0.00 0.00 4.30
2345 2899 2.682136 TGAAGACGGGATGGCGGA 60.682 61.111 0.00 0.00 0.00 5.54
2346 2900 2.202932 CTGAAGACGGGATGGCGG 60.203 66.667 0.00 0.00 0.00 6.13
2347 2901 2.202932 CCTGAAGACGGGATGGCG 60.203 66.667 0.00 0.00 44.87 5.69
2348 2902 3.309582 TCCTGAAGACGGGATGGC 58.690 61.111 0.00 0.00 45.56 4.40
2353 2907 1.751924 CTAGTTCCTCCTGAAGACGGG 59.248 57.143 0.00 0.00 43.52 5.28
2354 2908 1.135333 GCTAGTTCCTCCTGAAGACGG 59.865 57.143 0.00 0.00 32.37 4.79
2355 2909 1.819288 TGCTAGTTCCTCCTGAAGACG 59.181 52.381 0.00 0.00 32.37 4.18
2356 2910 3.963428 TTGCTAGTTCCTCCTGAAGAC 57.037 47.619 0.00 0.00 32.37 3.01
2357 2911 3.646162 TGTTTGCTAGTTCCTCCTGAAGA 59.354 43.478 0.00 0.00 32.37 2.87
2358 2912 4.008074 TGTTTGCTAGTTCCTCCTGAAG 57.992 45.455 0.00 0.00 32.37 3.02
2359 2913 4.202461 ACATGTTTGCTAGTTCCTCCTGAA 60.202 41.667 0.00 0.00 0.00 3.02
2360 2914 3.327757 ACATGTTTGCTAGTTCCTCCTGA 59.672 43.478 0.00 0.00 0.00 3.86
2361 2915 3.679389 ACATGTTTGCTAGTTCCTCCTG 58.321 45.455 0.00 0.00 0.00 3.86
2362 2916 3.307762 GGACATGTTTGCTAGTTCCTCCT 60.308 47.826 0.00 0.00 0.00 3.69
2363 2917 3.010420 GGACATGTTTGCTAGTTCCTCC 58.990 50.000 0.00 0.00 0.00 4.30
2364 2918 2.673368 CGGACATGTTTGCTAGTTCCTC 59.327 50.000 0.00 0.00 0.00 3.71
2365 2919 2.038557 ACGGACATGTTTGCTAGTTCCT 59.961 45.455 0.00 0.00 0.00 3.36
2366 2920 2.159627 CACGGACATGTTTGCTAGTTCC 59.840 50.000 0.00 0.00 0.00 3.62
2367 2921 2.412847 GCACGGACATGTTTGCTAGTTC 60.413 50.000 16.62 0.00 32.00 3.01
2368 2922 1.535462 GCACGGACATGTTTGCTAGTT 59.465 47.619 16.62 0.00 32.00 2.24
2369 2923 1.156736 GCACGGACATGTTTGCTAGT 58.843 50.000 16.62 2.97 32.00 2.57
2370 2924 0.095245 CGCACGGACATGTTTGCTAG 59.905 55.000 19.71 7.23 32.56 3.42
2371 2925 0.601576 ACGCACGGACATGTTTGCTA 60.602 50.000 19.71 0.00 32.56 3.49
2372 2926 1.444119 AACGCACGGACATGTTTGCT 61.444 50.000 19.71 9.05 32.56 3.91
2373 2927 1.008995 AACGCACGGACATGTTTGC 60.009 52.632 14.78 14.78 0.00 3.68
2374 2928 1.268113 GCAACGCACGGACATGTTTG 61.268 55.000 0.00 0.00 0.00 2.93
2375 2929 1.008995 GCAACGCACGGACATGTTT 60.009 52.632 0.00 0.00 0.00 2.83
2376 2930 1.719725 TTGCAACGCACGGACATGTT 61.720 50.000 0.00 0.00 38.71 2.71
2377 2931 2.183504 TTGCAACGCACGGACATGT 61.184 52.632 0.00 0.00 38.71 3.21
2378 2932 1.725625 GTTGCAACGCACGGACATG 60.726 57.895 14.90 0.00 38.71 3.21
2379 2933 2.637025 GTTGCAACGCACGGACAT 59.363 55.556 14.90 0.00 38.71 3.06
2380 2934 3.931130 CGTTGCAACGCACGGACA 61.931 61.111 35.89 0.00 46.06 4.02
2402 2956 6.351796 GGGCCATTATAGGTGTGATTGTTTTT 60.352 38.462 4.39 0.00 0.00 1.94
2403 2957 5.128663 GGGCCATTATAGGTGTGATTGTTTT 59.871 40.000 4.39 0.00 0.00 2.43
2404 2958 4.649218 GGGCCATTATAGGTGTGATTGTTT 59.351 41.667 4.39 0.00 0.00 2.83
2405 2959 4.215109 GGGCCATTATAGGTGTGATTGTT 58.785 43.478 4.39 0.00 0.00 2.83
2406 2960 3.204158 TGGGCCATTATAGGTGTGATTGT 59.796 43.478 0.00 0.00 0.00 2.71
2407 2961 3.831323 TGGGCCATTATAGGTGTGATTG 58.169 45.455 0.00 0.00 0.00 2.67
2408 2962 4.167892 TCTTGGGCCATTATAGGTGTGATT 59.832 41.667 7.26 0.00 0.00 2.57
2409 2963 3.721575 TCTTGGGCCATTATAGGTGTGAT 59.278 43.478 7.26 0.00 0.00 3.06
2410 2964 3.118038 GTCTTGGGCCATTATAGGTGTGA 60.118 47.826 7.26 0.00 0.00 3.58
2411 2965 3.214328 GTCTTGGGCCATTATAGGTGTG 58.786 50.000 7.26 0.00 0.00 3.82
2412 2966 2.174854 GGTCTTGGGCCATTATAGGTGT 59.825 50.000 7.26 0.00 0.00 4.16
2413 2967 2.443255 AGGTCTTGGGCCATTATAGGTG 59.557 50.000 7.26 0.00 0.00 4.00
2414 2968 2.711547 GAGGTCTTGGGCCATTATAGGT 59.288 50.000 7.26 0.00 0.00 3.08
2415 2969 2.982488 AGAGGTCTTGGGCCATTATAGG 59.018 50.000 7.26 0.00 0.00 2.57
2416 2970 3.648067 TGAGAGGTCTTGGGCCATTATAG 59.352 47.826 7.26 0.72 0.00 1.31
2417 2971 3.648067 CTGAGAGGTCTTGGGCCATTATA 59.352 47.826 7.26 0.00 0.00 0.98
2418 2972 2.441001 CTGAGAGGTCTTGGGCCATTAT 59.559 50.000 7.26 0.00 0.00 1.28
2419 2973 1.839994 CTGAGAGGTCTTGGGCCATTA 59.160 52.381 7.26 0.00 0.00 1.90
2420 2974 0.622665 CTGAGAGGTCTTGGGCCATT 59.377 55.000 7.26 0.00 0.00 3.16
2421 2975 0.548682 ACTGAGAGGTCTTGGGCCAT 60.549 55.000 7.26 0.00 0.00 4.40
2422 2976 1.152030 ACTGAGAGGTCTTGGGCCA 60.152 57.895 0.00 0.00 0.00 5.36
2423 2977 1.599576 GACTGAGAGGTCTTGGGCC 59.400 63.158 0.00 0.00 33.81 5.80
2424 2978 1.194781 TGGACTGAGAGGTCTTGGGC 61.195 60.000 0.00 0.00 36.55 5.36
2425 2979 0.901124 CTGGACTGAGAGGTCTTGGG 59.099 60.000 0.00 0.00 36.55 4.12
2426 2980 0.248843 GCTGGACTGAGAGGTCTTGG 59.751 60.000 0.00 0.00 36.55 3.61
2427 2981 1.204467 GAGCTGGACTGAGAGGTCTTG 59.796 57.143 0.00 0.00 36.55 3.02
2428 2982 1.203112 TGAGCTGGACTGAGAGGTCTT 60.203 52.381 0.00 0.00 37.56 3.01
2429 2983 0.407528 TGAGCTGGACTGAGAGGTCT 59.592 55.000 0.00 0.00 37.56 3.85
2430 2984 1.484038 ATGAGCTGGACTGAGAGGTC 58.516 55.000 0.00 0.00 37.26 3.85
2431 2985 2.836636 TATGAGCTGGACTGAGAGGT 57.163 50.000 0.00 0.00 0.00 3.85
2432 2986 4.686191 AAATATGAGCTGGACTGAGAGG 57.314 45.455 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.