Multiple sequence alignment - TraesCS1A01G392500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G392500 chr1A 100.000 3426 0 0 1 3426 559046558 559043133 0.000000e+00 6327.0
1 TraesCS1A01G392500 chr1A 82.651 1222 161 38 559 1763 559348911 559350098 0.000000e+00 1035.0
2 TraesCS1A01G392500 chr1A 88.011 367 21 15 2067 2426 559350366 559350716 2.460000e-111 412.0
3 TraesCS1A01G392500 chr1A 85.158 411 32 13 2045 2430 559232431 559232025 8.910000e-106 394.0
4 TraesCS1A01G392500 chr1D 94.328 1569 66 6 951 2498 467108583 467107017 0.000000e+00 2383.0
5 TraesCS1A01G392500 chr1D 85.253 990 104 23 780 1753 467299181 467300144 0.000000e+00 981.0
6 TraesCS1A01G392500 chr1D 89.197 361 22 9 2067 2426 467300396 467300740 5.250000e-118 435.0
7 TraesCS1A01G392500 chr1D 79.397 398 48 17 2544 2918 467105138 467104752 2.040000e-62 250.0
8 TraesCS1A01G392500 chr1D 94.483 145 7 1 1 145 218325703 218325560 4.450000e-54 222.0
9 TraesCS1A01G392500 chr1B 88.909 1632 106 27 557 2159 643908732 643907147 0.000000e+00 1941.0
10 TraesCS1A01G392500 chr1B 86.338 1786 119 57 985 2706 644527399 644525675 0.000000e+00 1831.0
11 TraesCS1A01G392500 chr1B 84.894 993 106 24 789 1763 644799219 644798253 0.000000e+00 963.0
12 TraesCS1A01G392500 chr1B 89.189 703 54 9 1070 1760 644310619 644311311 0.000000e+00 857.0
13 TraesCS1A01G392500 chr1B 95.735 422 18 0 985 1406 644341714 644342135 0.000000e+00 680.0
14 TraesCS1A01G392500 chr1B 89.141 396 32 6 965 1350 645092873 645093267 1.850000e-132 483.0
15 TraesCS1A01G392500 chr1B 89.757 371 22 9 1377 1737 645095715 645096079 8.660000e-126 460.0
16 TraesCS1A01G392500 chr1B 88.643 361 24 9 2067 2426 644798030 644797686 1.140000e-114 424.0
17 TraesCS1A01G392500 chr1B 92.014 288 19 3 2052 2335 644311448 644311735 5.330000e-108 401.0
18 TraesCS1A01G392500 chr1B 96.330 218 8 0 3209 3426 593701883 593702100 3.250000e-95 359.0
19 TraesCS1A01G392500 chr1B 80.315 508 50 30 2228 2706 644342146 644342632 4.240000e-89 339.0
20 TraesCS1A01G392500 chr1B 83.668 349 47 9 2040 2387 645096719 645097058 1.530000e-83 320.0
21 TraesCS1A01G392500 chr1B 82.429 387 41 11 2644 3018 643903633 643903262 2.570000e-81 313.0
22 TraesCS1A01G392500 chr1B 90.769 195 17 1 3208 3401 681838309 681838503 3.390000e-65 259.0
23 TraesCS1A01G392500 chr1B 93.939 132 7 1 1 131 312152089 312151958 7.500000e-47 198.0
24 TraesCS1A01G392500 chr1B 90.411 146 12 2 1 145 489539446 489539590 1.250000e-44 191.0
25 TraesCS1A01G392500 chr1B 88.235 68 7 1 471 537 603538135 603538202 2.830000e-11 80.5
26 TraesCS1A01G392500 chr1B 87.143 70 8 1 573 642 644799407 644799339 1.020000e-10 78.7
27 TraesCS1A01G392500 chr4D 90.026 391 27 9 2 391 497694493 497694872 2.370000e-136 496.0
28 TraesCS1A01G392500 chr4D 89.514 391 28 10 2 391 437820848 437820470 1.850000e-132 483.0
29 TraesCS1A01G392500 chr4D 88.393 112 12 1 427 537 497695041 497695152 2.140000e-27 134.0
30 TraesCS1A01G392500 chr6D 89.286 392 38 3 1 391 111020519 111020131 3.970000e-134 488.0
31 TraesCS1A01G392500 chr5B 89.460 389 28 5 3 391 686436321 686436696 2.390000e-131 479.0
32 TraesCS1A01G392500 chr5B 96.847 222 7 0 3205 3426 11954131 11954352 4.180000e-99 372.0
33 TraesCS1A01G392500 chr5B 91.071 112 9 1 427 537 686436854 686436965 2.130000e-32 150.0
34 TraesCS1A01G392500 chr5D 88.430 363 31 6 1 359 542467048 542467403 8.790000e-116 427.0
35 TraesCS1A01G392500 chr5D 92.821 195 13 1 3017 3211 219644310 219644503 7.240000e-72 281.0
36 TraesCS1A01G392500 chr5D 91.071 112 9 1 427 537 542467583 542467694 2.130000e-32 150.0
37 TraesCS1A01G392500 chr2B 99.074 216 2 0 3211 3426 138977855 138978070 4.150000e-104 388.0
38 TraesCS1A01G392500 chr2B 91.878 197 16 0 3015 3211 699069302 699069106 3.370000e-70 276.0
39 TraesCS1A01G392500 chr2B 90.594 202 17 2 3204 3404 577783517 577783317 2.030000e-67 267.0
40 TraesCS1A01G392500 chr2B 79.592 147 26 4 177 321 93809822 93809966 6.050000e-18 102.0
41 TraesCS1A01G392500 chr7D 93.151 219 15 0 3208 3426 274955215 274954997 4.270000e-84 322.0
42 TraesCS1A01G392500 chr7D 91.878 197 16 0 3015 3211 568274722 568274526 3.370000e-70 276.0
43 TraesCS1A01G392500 chr7D 91.919 198 15 1 3014 3211 577236172 577236368 3.370000e-70 276.0
44 TraesCS1A01G392500 chr6B 93.333 195 12 1 3017 3211 256448360 256448553 1.560000e-73 287.0
45 TraesCS1A01G392500 chr6B 93.333 195 12 1 3017 3211 548176927 548176734 1.560000e-73 287.0
46 TraesCS1A01G392500 chr4A 92.079 202 15 1 3008 3209 690116836 690117036 2.010000e-72 283.0
47 TraesCS1A01G392500 chr4A 90.769 195 17 1 3211 3404 620421473 620421279 3.390000e-65 259.0
48 TraesCS1A01G392500 chr2D 92.821 195 13 1 3017 3211 476698489 476698296 7.240000e-72 281.0
49 TraesCS1A01G392500 chr2D 90.265 113 10 1 427 538 19543273 19543385 2.760000e-31 147.0
50 TraesCS1A01G392500 chr3B 91.626 203 16 1 3009 3211 636852300 636852501 2.600000e-71 279.0
51 TraesCS1A01G392500 chr3B 86.897 145 17 2 1 145 225294890 225295032 9.840000e-36 161.0
52 TraesCS1A01G392500 chrUn 92.308 195 14 1 3017 3211 335936214 335936407 3.370000e-70 276.0
53 TraesCS1A01G392500 chr7B 91.414 198 16 1 3208 3404 254778539 254778342 1.570000e-68 270.0
54 TraesCS1A01G392500 chr2A 91.795 195 15 1 3208 3401 374142166 374142360 1.570000e-68 270.0
55 TraesCS1A01G392500 chr3D 91.964 112 8 1 427 537 581827982 581828093 4.580000e-34 156.0
56 TraesCS1A01G392500 chr3D 89.381 113 11 1 427 538 589697695 589697583 1.280000e-29 141.0
57 TraesCS1A01G392500 chr3A 91.667 48 2 2 347 394 684660007 684660052 7.940000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G392500 chr1A 559043133 559046558 3425 True 6327.000000 6327 100.000000 1 3426 1 chr1A.!!$R1 3425
1 TraesCS1A01G392500 chr1A 559348911 559350716 1805 False 723.500000 1035 85.331000 559 2426 2 chr1A.!!$F1 1867
2 TraesCS1A01G392500 chr1D 467104752 467108583 3831 True 1316.500000 2383 86.862500 951 2918 2 chr1D.!!$R2 1967
3 TraesCS1A01G392500 chr1D 467299181 467300740 1559 False 708.000000 981 87.225000 780 2426 2 chr1D.!!$F1 1646
4 TraesCS1A01G392500 chr1B 644525675 644527399 1724 True 1831.000000 1831 86.338000 985 2706 1 chr1B.!!$R2 1721
5 TraesCS1A01G392500 chr1B 643903262 643908732 5470 True 1127.000000 1941 85.669000 557 3018 2 chr1B.!!$R3 2461
6 TraesCS1A01G392500 chr1B 644310619 644311735 1116 False 629.000000 857 90.601500 1070 2335 2 chr1B.!!$F5 1265
7 TraesCS1A01G392500 chr1B 644341714 644342632 918 False 509.500000 680 88.025000 985 2706 2 chr1B.!!$F6 1721
8 TraesCS1A01G392500 chr1B 644797686 644799407 1721 True 488.566667 963 86.893333 573 2426 3 chr1B.!!$R4 1853
9 TraesCS1A01G392500 chr1B 645092873 645097058 4185 False 421.000000 483 87.522000 965 2387 3 chr1B.!!$F7 1422
10 TraesCS1A01G392500 chr4D 497694493 497695152 659 False 315.000000 496 89.209500 2 537 2 chr4D.!!$F1 535
11 TraesCS1A01G392500 chr5B 686436321 686436965 644 False 314.500000 479 90.265500 3 537 2 chr5B.!!$F2 534
12 TraesCS1A01G392500 chr5D 542467048 542467694 646 False 288.500000 427 89.750500 1 537 2 chr5D.!!$F2 536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
549 713 0.1791 CGCTCCCATCTCATTCACGT 60.179 55.0 0.0 0.0 0.0 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2533 7847 0.539051 CCCAAGGGTGCAACAACAAA 59.461 50.0 3.06 0.0 39.98 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 98 9.613428 ACATGCAAGTACTATACAATATGTGTT 57.387 29.630 0.00 0.00 41.98 3.32
234 242 5.708230 ACCGTTGCAACTAATTCATTCCTTA 59.292 36.000 26.09 0.00 0.00 2.69
273 281 6.747280 CCTTTTCTGCGAAAATACCACTATTG 59.253 38.462 13.98 2.93 0.00 1.90
330 339 7.840342 ATTTGTGTGTAAATTCTGTGCAAAA 57.160 28.000 0.00 0.00 0.00 2.44
407 477 4.642445 TGACATATGTACGTCGAATGGT 57.358 40.909 8.71 0.00 34.78 3.55
412 482 7.012232 TGACATATGTACGTCGAATGGTAGTAA 59.988 37.037 8.71 0.00 34.78 2.24
440 603 1.666872 GTTGTCTTACGGCTGCGGT 60.667 57.895 17.06 17.06 0.00 5.68
457 620 1.463674 GGTGTTACTCAGCCAATGGG 58.536 55.000 0.00 0.00 38.46 4.00
506 669 7.362662 TGCAAAAAGTGACTGACTCAAATATC 58.637 34.615 0.00 0.00 31.73 1.63
508 671 7.324616 GCAAAAAGTGACTGACTCAAATATCAC 59.675 37.037 0.00 0.00 37.35 3.06
511 675 5.784177 AGTGACTGACTCAAATATCACGTT 58.216 37.500 0.00 0.00 41.03 3.99
512 676 5.864474 AGTGACTGACTCAAATATCACGTTC 59.136 40.000 0.00 0.00 41.03 3.95
515 679 5.227908 ACTGACTCAAATATCACGTTCGTT 58.772 37.500 0.00 0.00 0.00 3.85
539 703 4.899239 CGTCCAGCCGCTCCCATC 62.899 72.222 0.00 0.00 0.00 3.51
540 704 3.474570 GTCCAGCCGCTCCCATCT 61.475 66.667 0.00 0.00 0.00 2.90
541 705 3.157252 TCCAGCCGCTCCCATCTC 61.157 66.667 0.00 0.00 0.00 2.75
542 706 3.473647 CCAGCCGCTCCCATCTCA 61.474 66.667 0.00 0.00 0.00 3.27
543 707 2.815945 CCAGCCGCTCCCATCTCAT 61.816 63.158 0.00 0.00 0.00 2.90
544 708 1.147824 CAGCCGCTCCCATCTCATT 59.852 57.895 0.00 0.00 0.00 2.57
545 709 0.883814 CAGCCGCTCCCATCTCATTC 60.884 60.000 0.00 0.00 0.00 2.67
546 710 1.146930 GCCGCTCCCATCTCATTCA 59.853 57.895 0.00 0.00 0.00 2.57
547 711 1.162800 GCCGCTCCCATCTCATTCAC 61.163 60.000 0.00 0.00 0.00 3.18
548 712 0.877649 CCGCTCCCATCTCATTCACG 60.878 60.000 0.00 0.00 0.00 4.35
549 713 0.179100 CGCTCCCATCTCATTCACGT 60.179 55.000 0.00 0.00 0.00 4.49
550 714 1.067060 CGCTCCCATCTCATTCACGTA 59.933 52.381 0.00 0.00 0.00 3.57
551 715 2.288457 CGCTCCCATCTCATTCACGTAT 60.288 50.000 0.00 0.00 0.00 3.06
552 716 3.733337 GCTCCCATCTCATTCACGTATT 58.267 45.455 0.00 0.00 0.00 1.89
553 717 4.558697 CGCTCCCATCTCATTCACGTATTA 60.559 45.833 0.00 0.00 0.00 0.98
554 718 5.297547 GCTCCCATCTCATTCACGTATTAA 58.702 41.667 0.00 0.00 0.00 1.40
555 719 5.934625 GCTCCCATCTCATTCACGTATTAAT 59.065 40.000 0.00 0.00 0.00 1.40
591 756 1.523934 CTTGTGTTCCGTTACACCGAC 59.476 52.381 12.89 0.00 46.13 4.79
596 761 2.544686 TGTTCCGTTACACCGACAATTG 59.455 45.455 3.24 3.24 0.00 2.32
601 766 0.250381 TTACACCGACAATTGGGCGT 60.250 50.000 10.83 5.11 0.00 5.68
680 866 2.877097 TGGCACTTCCACACATACAT 57.123 45.000 0.00 0.00 40.72 2.29
681 867 3.990959 TGGCACTTCCACACATACATA 57.009 42.857 0.00 0.00 40.72 2.29
692 878 3.801594 CACACATACATAGTGCGTGCATA 59.198 43.478 0.00 0.00 40.59 3.14
696 882 1.651987 ACATAGTGCGTGCATACACC 58.348 50.000 15.96 2.20 44.40 4.16
697 883 1.066502 ACATAGTGCGTGCATACACCA 60.067 47.619 15.96 5.70 44.40 4.17
698 884 1.327460 CATAGTGCGTGCATACACCAC 59.673 52.381 15.96 8.74 44.40 4.16
704 890 3.111536 GTGCATACACCACGTACGT 57.888 52.632 16.72 16.72 41.21 3.57
705 891 2.261037 GTGCATACACCACGTACGTA 57.739 50.000 22.34 5.28 41.21 3.57
706 892 1.913403 GTGCATACACCACGTACGTAC 59.087 52.381 22.34 15.90 41.21 3.67
716 902 2.174764 CACGTACGTACTAGCTTGCTG 58.825 52.381 22.34 6.99 0.00 4.41
727 913 1.876322 AGCTTGCTGTGACACTCTTC 58.124 50.000 7.20 0.00 0.00 2.87
744 930 1.068588 CTTCCCACGTCACTTCACTCA 59.931 52.381 0.00 0.00 0.00 3.41
747 933 1.491670 CCACGTCACTTCACTCACTG 58.508 55.000 0.00 0.00 0.00 3.66
748 934 1.202417 CCACGTCACTTCACTCACTGT 60.202 52.381 0.00 0.00 0.00 3.55
749 935 2.120232 CACGTCACTTCACTCACTGTC 58.880 52.381 0.00 0.00 0.00 3.51
750 936 1.749063 ACGTCACTTCACTCACTGTCA 59.251 47.619 0.00 0.00 0.00 3.58
751 937 2.120232 CGTCACTTCACTCACTGTCAC 58.880 52.381 0.00 0.00 0.00 3.67
752 938 2.223595 CGTCACTTCACTCACTGTCACT 60.224 50.000 0.00 0.00 0.00 3.41
753 939 3.119291 GTCACTTCACTCACTGTCACTG 58.881 50.000 0.00 0.00 0.00 3.66
774 960 6.202954 CACTGGACCAAACTAACTAAAGTGAG 59.797 42.308 0.00 0.00 34.62 3.51
793 987 0.881796 GCACCTGGTTCTTGGTTAGC 59.118 55.000 0.00 0.00 33.75 3.09
794 988 1.534729 CACCTGGTTCTTGGTTAGCC 58.465 55.000 0.00 0.00 33.75 3.93
810 1004 1.676746 AGCCACTGCAGCTCATAATG 58.323 50.000 15.27 2.05 41.13 1.90
813 1007 2.424601 GCCACTGCAGCTCATAATGAAA 59.575 45.455 15.27 0.00 37.47 2.69
833 1027 6.101997 TGAAAGCTCATGTCGCCTATATATG 58.898 40.000 0.00 0.00 0.00 1.78
855 1054 4.736896 GCCGTCACCCCGTCAGAC 62.737 72.222 0.00 0.00 0.00 3.51
883 1083 1.153066 TGCAAACGTTCCCAGCTCA 60.153 52.632 0.00 0.00 0.00 4.26
884 1084 1.282875 GCAAACGTTCCCAGCTCAC 59.717 57.895 0.00 0.00 0.00 3.51
886 1086 1.228154 AAACGTTCCCAGCTCACCC 60.228 57.895 0.00 0.00 0.00 4.61
889 1089 2.352805 GTTCCCAGCTCACCCCTG 59.647 66.667 0.00 0.00 0.00 4.45
895 1095 3.007920 AGCTCACCCCTGCTCCTG 61.008 66.667 0.00 0.00 33.90 3.86
897 1097 2.667418 CTCACCCCTGCTCCTGTG 59.333 66.667 0.00 0.00 0.00 3.66
900 1100 3.325753 ACCCCTGCTCCTGTGCTC 61.326 66.667 0.00 0.00 0.00 4.26
907 1107 2.658064 GCTCCTGTGCTCCTGCTCT 61.658 63.158 0.00 0.00 40.48 4.09
911 1121 1.003597 CTGTGCTCCTGCTCTGCTT 60.004 57.895 0.00 0.00 40.48 3.91
913 1127 2.099431 GTGCTCCTGCTCTGCTTCG 61.099 63.158 0.00 0.00 40.48 3.79
924 1138 1.597854 CTGCTTCGAACCAGGTGCA 60.598 57.895 11.90 9.50 0.00 4.57
941 1155 1.544246 TGCACTCTTTAGCTAGCACGA 59.456 47.619 18.83 6.32 0.00 4.35
968 1190 2.447244 ACTGCTCTGCTTCACTACAC 57.553 50.000 0.00 0.00 0.00 2.90
1032 1254 2.668632 GTGCCCATCTCGGTGGAA 59.331 61.111 0.00 0.00 42.02 3.53
1154 1385 2.657237 CGTCGGCTTCTTCAGGGT 59.343 61.111 0.00 0.00 0.00 4.34
1739 4413 1.002274 ACTCCCTCCAGGTAGGCAG 59.998 63.158 0.41 0.00 37.29 4.85
1760 4446 2.337583 CACACCATTACCACTCACTCG 58.662 52.381 0.00 0.00 0.00 4.18
1784 4470 1.490416 TTACCTTTGCCGCCTACCCA 61.490 55.000 0.00 0.00 0.00 4.51
1795 4481 2.289694 CCGCCTACCCAATTCATCTAGG 60.290 54.545 0.00 0.00 0.00 3.02
1797 4483 3.071023 CGCCTACCCAATTCATCTAGGAA 59.929 47.826 0.00 0.00 0.00 3.36
2007 4844 6.161855 TGCATAACTCTAGTGGGAATACTG 57.838 41.667 0.00 0.00 32.19 2.74
2027 4878 0.931702 TTCGTTGCACCAGTACGTTG 59.068 50.000 7.67 0.00 36.70 4.10
2068 5188 6.427974 GCATGTATTCTGATGTGAGACATTG 58.572 40.000 0.00 0.00 39.27 2.82
2341 6258 2.437359 CTCCCAGCCGCCAAAGAG 60.437 66.667 0.00 0.00 0.00 2.85
2342 6259 2.927856 TCCCAGCCGCCAAAGAGA 60.928 61.111 0.00 0.00 0.00 3.10
2343 6260 2.747855 CCCAGCCGCCAAAGAGAC 60.748 66.667 0.00 0.00 0.00 3.36
2344 6261 2.747855 CCAGCCGCCAAAGAGACC 60.748 66.667 0.00 0.00 0.00 3.85
2345 6262 2.032528 CAGCCGCCAAAGAGACCA 59.967 61.111 0.00 0.00 0.00 4.02
2346 6263 1.600636 CAGCCGCCAAAGAGACCAA 60.601 57.895 0.00 0.00 0.00 3.67
2347 6264 1.600916 AGCCGCCAAAGAGACCAAC 60.601 57.895 0.00 0.00 0.00 3.77
2348 6265 1.896660 GCCGCCAAAGAGACCAACA 60.897 57.895 0.00 0.00 0.00 3.33
2349 6266 1.856265 GCCGCCAAAGAGACCAACAG 61.856 60.000 0.00 0.00 0.00 3.16
2350 6267 1.576421 CGCCAAAGAGACCAACAGC 59.424 57.895 0.00 0.00 0.00 4.40
2351 6268 0.886490 CGCCAAAGAGACCAACAGCT 60.886 55.000 0.00 0.00 0.00 4.24
2355 6272 1.048601 AAAGAGACCAACAGCTCCGA 58.951 50.000 0.00 0.00 0.00 4.55
2431 7545 2.496470 GGCAACAGTGTACTAGGCTACT 59.504 50.000 0.00 0.00 0.00 2.57
2457 7729 8.491331 AGTGTAGTTAGCTTAGTACTAGTGAC 57.509 38.462 16.42 7.77 0.00 3.67
2501 7786 5.385509 AATGTAATCACCCGGAAAAAGTG 57.614 39.130 0.73 1.35 0.00 3.16
2507 7821 2.173143 TCACCCGGAAAAAGTGGTAGTT 59.827 45.455 0.73 0.00 32.29 2.24
2509 7823 2.173143 ACCCGGAAAAAGTGGTAGTTCA 59.827 45.455 0.73 0.00 0.00 3.18
2510 7824 3.215975 CCCGGAAAAAGTGGTAGTTCAA 58.784 45.455 0.73 0.00 0.00 2.69
2512 7826 3.881089 CCGGAAAAAGTGGTAGTTCAAGT 59.119 43.478 0.00 0.00 0.00 3.16
2513 7827 5.058490 CCGGAAAAAGTGGTAGTTCAAGTA 58.942 41.667 0.00 0.00 0.00 2.24
2516 7830 7.415429 CCGGAAAAAGTGGTAGTTCAAGTAAAA 60.415 37.037 0.00 0.00 0.00 1.52
2517 7831 7.969508 CGGAAAAAGTGGTAGTTCAAGTAAAAA 59.030 33.333 0.00 0.00 0.00 1.94
2546 9743 3.726291 AGTGGTATTTGTTGTTGCACC 57.274 42.857 0.00 0.00 0.00 5.01
2573 9772 2.262292 CCCAAAACTGGCATGGCG 59.738 61.111 15.27 11.73 32.71 5.69
2623 9827 3.194116 CGGCCTTGTAACTTCCACTAGTA 59.806 47.826 0.00 0.00 0.00 1.82
2624 9828 4.677250 CGGCCTTGTAACTTCCACTAGTAG 60.677 50.000 0.00 0.00 0.00 2.57
2625 9829 4.465305 GGCCTTGTAACTTCCACTAGTAGA 59.535 45.833 3.59 0.00 0.00 2.59
2631 9885 9.250624 CTTGTAACTTCCACTAGTAGATAATGC 57.749 37.037 3.59 0.00 0.00 3.56
2683 9945 1.754621 TTTTCACCGGCAGGCAACA 60.755 52.632 0.00 0.00 42.76 3.33
2742 10004 3.812053 GCATGGCACCACAATTTTGTTTA 59.188 39.130 0.00 0.00 39.91 2.01
2790 10052 9.856488 TTCATAAATAGACGCATATACTCTTCC 57.144 33.333 0.00 0.00 0.00 3.46
2791 10053 9.244292 TCATAAATAGACGCATATACTCTTCCT 57.756 33.333 0.00 0.00 0.00 3.36
2802 10064 6.591834 GCATATACTCTTCCTTATGAACGCAT 59.408 38.462 0.00 0.00 38.54 4.73
2817 10079 0.300491 CGCATGCGCACGTACTTTAT 59.700 50.000 29.09 0.00 38.40 1.40
2818 10080 1.267334 CGCATGCGCACGTACTTTATT 60.267 47.619 29.09 0.00 38.40 1.40
2819 10081 2.363220 GCATGCGCACGTACTTTATTC 58.637 47.619 14.90 0.00 38.36 1.75
2823 10085 3.181397 TGCGCACGTACTTTATTCCTAC 58.819 45.455 5.66 0.00 0.00 3.18
2847 10109 2.094494 GCATCTTCGAGAGACTGAACCA 60.094 50.000 0.35 0.00 41.84 3.67
2893 10155 4.381185 AAGCCGTCACATACGTCTTCATAA 60.381 41.667 0.00 0.00 46.05 1.90
2894 10156 6.410569 AAGCCGTCACATACGTCTTCATAAC 61.411 44.000 0.00 0.00 46.05 1.89
2895 10157 8.505085 AAGCCGTCACATACGTCTTCATAACT 62.505 42.308 0.00 0.00 46.05 2.24
2898 10160 5.971792 CGTCACATACGTCTTCATAACTGAT 59.028 40.000 0.00 0.00 46.72 2.90
2935 10197 6.368213 CGCCGAAATACCTGAAATAAATACC 58.632 40.000 0.00 0.00 0.00 2.73
2946 10209 8.458843 ACCTGAAATAAATACCGAAAATGTGAG 58.541 33.333 0.00 0.00 0.00 3.51
2969 10232 1.478105 CCAATTGCCTAGCCCTTGAAC 59.522 52.381 0.00 0.00 0.00 3.18
2972 10235 1.663911 TTGCCTAGCCCTTGAACCTA 58.336 50.000 0.00 0.00 0.00 3.08
2973 10236 1.663911 TGCCTAGCCCTTGAACCTAA 58.336 50.000 0.00 0.00 0.00 2.69
2974 10237 2.205342 TGCCTAGCCCTTGAACCTAAT 58.795 47.619 0.00 0.00 0.00 1.73
2976 10239 3.215151 GCCTAGCCCTTGAACCTAATTC 58.785 50.000 0.00 0.00 37.88 2.17
2977 10240 3.117851 GCCTAGCCCTTGAACCTAATTCT 60.118 47.826 0.00 0.00 38.25 2.40
2981 10244 3.850173 AGCCCTTGAACCTAATTCTACCA 59.150 43.478 0.00 0.00 38.25 3.25
2982 10245 3.945921 GCCCTTGAACCTAATTCTACCAC 59.054 47.826 0.00 0.00 38.25 4.16
2993 10267 8.400184 ACCTAATTCTACCACAAAAACCTAAC 57.600 34.615 0.00 0.00 0.00 2.34
3005 10279 5.301805 ACAAAAACCTAACCAACTGATCTGG 59.698 40.000 4.49 1.20 40.05 3.86
3018 10292 2.947652 CTGATCTGGCACCACAATTAGG 59.052 50.000 0.00 0.00 0.00 2.69
3019 10293 1.678101 GATCTGGCACCACAATTAGGC 59.322 52.381 0.00 0.00 0.00 3.93
3020 10294 0.323360 TCTGGCACCACAATTAGGCC 60.323 55.000 0.00 0.00 44.82 5.19
3021 10295 1.304879 TGGCACCACAATTAGGCCC 60.305 57.895 0.00 0.00 43.96 5.80
3022 10296 1.000359 GGCACCACAATTAGGCCCT 60.000 57.895 0.00 0.00 38.70 5.19
3023 10297 0.614697 GGCACCACAATTAGGCCCTT 60.615 55.000 0.00 0.00 38.70 3.95
3024 10298 0.817654 GCACCACAATTAGGCCCTTC 59.182 55.000 0.00 0.00 0.00 3.46
3025 10299 1.474330 CACCACAATTAGGCCCTTCC 58.526 55.000 0.00 0.00 0.00 3.46
3026 10300 0.335019 ACCACAATTAGGCCCTTCCC 59.665 55.000 0.00 0.00 34.51 3.97
3027 10301 0.334676 CCACAATTAGGCCCTTCCCA 59.665 55.000 0.00 0.00 34.51 4.37
3028 10302 1.686115 CCACAATTAGGCCCTTCCCAG 60.686 57.143 0.00 0.00 34.51 4.45
3029 10303 1.005924 CACAATTAGGCCCTTCCCAGT 59.994 52.381 0.00 0.00 34.51 4.00
3030 10304 1.005924 ACAATTAGGCCCTTCCCAGTG 59.994 52.381 0.00 0.00 34.51 3.66
3031 10305 0.033109 AATTAGGCCCTTCCCAGTGC 60.033 55.000 0.00 0.00 34.51 4.40
3032 10306 0.921256 ATTAGGCCCTTCCCAGTGCT 60.921 55.000 0.00 0.00 34.51 4.40
3033 10307 1.562672 TTAGGCCCTTCCCAGTGCTC 61.563 60.000 0.00 0.00 34.51 4.26
3034 10308 4.432741 GGCCCTTCCCAGTGCTCC 62.433 72.222 0.00 0.00 0.00 4.70
3035 10309 3.650950 GCCCTTCCCAGTGCTCCA 61.651 66.667 0.00 0.00 0.00 3.86
3036 10310 2.352805 CCCTTCCCAGTGCTCCAC 59.647 66.667 0.00 0.00 34.10 4.02
3037 10311 2.046892 CCTTCCCAGTGCTCCACG 60.047 66.667 0.00 0.00 39.64 4.94
3038 10312 2.046892 CTTCCCAGTGCTCCACGG 60.047 66.667 0.00 0.00 39.64 4.94
3039 10313 2.847234 TTCCCAGTGCTCCACGGT 60.847 61.111 0.00 0.00 39.64 4.83
3040 10314 3.177194 TTCCCAGTGCTCCACGGTG 62.177 63.158 0.00 0.00 39.64 4.94
3041 10315 4.704833 CCCAGTGCTCCACGGTGG 62.705 72.222 21.27 21.27 39.64 4.61
3042 10316 3.625897 CCAGTGCTCCACGGTGGA 61.626 66.667 27.17 27.17 45.98 4.02
3043 10317 2.357517 CAGTGCTCCACGGTGGAC 60.358 66.667 25.53 20.72 42.67 4.02
3044 10318 2.842462 AGTGCTCCACGGTGGACA 60.842 61.111 25.53 22.79 42.67 4.02
3045 10319 2.357517 GTGCTCCACGGTGGACAG 60.358 66.667 25.53 17.65 42.67 3.51
3046 10320 3.625897 TGCTCCACGGTGGACAGG 61.626 66.667 25.53 16.94 42.67 4.00
3047 10321 3.626924 GCTCCACGGTGGACAGGT 61.627 66.667 25.53 0.00 42.67 4.00
3048 10322 2.343758 CTCCACGGTGGACAGGTG 59.656 66.667 25.53 12.04 42.67 4.00
3049 10323 3.883744 CTCCACGGTGGACAGGTGC 62.884 68.421 25.53 0.00 42.67 5.01
3050 10324 3.941188 CCACGGTGGACAGGTGCT 61.941 66.667 22.77 0.00 40.96 4.40
3051 10325 2.579657 CCACGGTGGACAGGTGCTA 61.580 63.158 22.77 0.00 40.96 3.49
3052 10326 1.369692 CACGGTGGACAGGTGCTAA 59.630 57.895 0.00 0.00 0.00 3.09
3053 10327 0.670546 CACGGTGGACAGGTGCTAAG 60.671 60.000 0.00 0.00 0.00 2.18
3054 10328 1.741770 CGGTGGACAGGTGCTAAGC 60.742 63.158 0.00 0.00 0.00 3.09
3055 10329 1.374947 GGTGGACAGGTGCTAAGCA 59.625 57.895 0.00 0.00 35.60 3.91
3056 10330 0.035056 GGTGGACAGGTGCTAAGCAT 60.035 55.000 0.00 0.00 41.91 3.79
3057 10331 1.089920 GTGGACAGGTGCTAAGCATG 58.910 55.000 0.00 0.00 41.91 4.06
3058 10332 0.677731 TGGACAGGTGCTAAGCATGC 60.678 55.000 10.51 10.51 41.91 4.06
3059 10333 1.379642 GGACAGGTGCTAAGCATGCC 61.380 60.000 15.66 0.00 41.91 4.40
3060 10334 0.677731 GACAGGTGCTAAGCATGCCA 60.678 55.000 15.66 1.49 41.91 4.92
3061 10335 0.962356 ACAGGTGCTAAGCATGCCAC 60.962 55.000 15.66 14.84 41.91 5.01
3062 10336 0.961857 CAGGTGCTAAGCATGCCACA 60.962 55.000 21.32 10.41 41.91 4.17
3063 10337 0.033796 AGGTGCTAAGCATGCCACAT 60.034 50.000 21.32 14.50 41.91 3.21
3064 10338 1.212688 AGGTGCTAAGCATGCCACATA 59.787 47.619 21.32 8.11 41.91 2.29
3065 10339 2.023673 GGTGCTAAGCATGCCACATAA 58.976 47.619 21.32 0.61 41.91 1.90
3066 10340 2.033801 GGTGCTAAGCATGCCACATAAG 59.966 50.000 21.32 9.67 41.91 1.73
3067 10341 1.677576 TGCTAAGCATGCCACATAAGC 59.322 47.619 15.66 14.23 31.71 3.09
3068 10342 1.677576 GCTAAGCATGCCACATAAGCA 59.322 47.619 15.66 0.00 45.94 3.91
3069 10343 2.099592 GCTAAGCATGCCACATAAGCAA 59.900 45.455 15.66 0.00 44.83 3.91
3070 10344 3.429272 GCTAAGCATGCCACATAAGCAAA 60.429 43.478 15.66 0.00 44.83 3.68
3071 10345 3.681593 AAGCATGCCACATAAGCAAAA 57.318 38.095 15.66 0.00 44.83 2.44
3072 10346 3.681593 AGCATGCCACATAAGCAAAAA 57.318 38.095 15.66 0.00 44.83 1.94
3102 10376 2.896685 TGGCACAACATTTAAGAAGGGG 59.103 45.455 0.00 0.00 31.92 4.79
3103 10377 3.161866 GGCACAACATTTAAGAAGGGGA 58.838 45.455 0.00 0.00 0.00 4.81
3104 10378 3.193479 GGCACAACATTTAAGAAGGGGAG 59.807 47.826 0.00 0.00 0.00 4.30
3105 10379 4.079253 GCACAACATTTAAGAAGGGGAGA 58.921 43.478 0.00 0.00 0.00 3.71
3106 10380 4.156739 GCACAACATTTAAGAAGGGGAGAG 59.843 45.833 0.00 0.00 0.00 3.20
3107 10381 5.560724 CACAACATTTAAGAAGGGGAGAGA 58.439 41.667 0.00 0.00 0.00 3.10
3108 10382 5.645497 CACAACATTTAAGAAGGGGAGAGAG 59.355 44.000 0.00 0.00 0.00 3.20
3109 10383 4.495690 ACATTTAAGAAGGGGAGAGAGC 57.504 45.455 0.00 0.00 0.00 4.09
3110 10384 3.846588 ACATTTAAGAAGGGGAGAGAGCA 59.153 43.478 0.00 0.00 0.00 4.26
3111 10385 3.983044 TTTAAGAAGGGGAGAGAGCAC 57.017 47.619 0.00 0.00 0.00 4.40
3112 10386 2.930109 TAAGAAGGGGAGAGAGCACT 57.070 50.000 0.00 0.00 0.00 4.40
3113 10387 2.037385 AAGAAGGGGAGAGAGCACTT 57.963 50.000 0.00 0.00 0.00 3.16
3114 10388 2.037385 AGAAGGGGAGAGAGCACTTT 57.963 50.000 0.00 0.00 0.00 2.66
3115 10389 1.627834 AGAAGGGGAGAGAGCACTTTG 59.372 52.381 0.00 0.00 0.00 2.77
3116 10390 0.695347 AAGGGGAGAGAGCACTTTGG 59.305 55.000 0.00 0.00 0.00 3.28
3117 10391 0.474660 AGGGGAGAGAGCACTTTGGT 60.475 55.000 0.00 0.00 0.00 3.67
3118 10392 0.402121 GGGGAGAGAGCACTTTGGTT 59.598 55.000 0.00 0.00 0.00 3.67
3119 10393 1.628846 GGGGAGAGAGCACTTTGGTTA 59.371 52.381 0.00 0.00 0.00 2.85
3120 10394 2.615747 GGGGAGAGAGCACTTTGGTTAC 60.616 54.545 0.00 0.00 0.00 2.50
3121 10395 2.303311 GGGAGAGAGCACTTTGGTTACT 59.697 50.000 0.00 0.00 0.00 2.24
3122 10396 3.591023 GGAGAGAGCACTTTGGTTACTC 58.409 50.000 0.00 0.00 33.30 2.59
3123 10397 3.591023 GAGAGAGCACTTTGGTTACTCC 58.409 50.000 0.00 0.00 30.43 3.85
3124 10398 2.972713 AGAGAGCACTTTGGTTACTCCA 59.027 45.455 0.00 0.00 45.60 3.86
3134 10408 3.955524 TGGTTACTCCAGGAAAAACCA 57.044 42.857 23.26 23.26 45.47 3.67
3135 10409 4.252570 TGGTTACTCCAGGAAAAACCAA 57.747 40.909 24.25 13.20 44.87 3.67
3136 10410 4.810345 TGGTTACTCCAGGAAAAACCAAT 58.190 39.130 24.25 0.00 44.87 3.16
3137 10411 4.586841 TGGTTACTCCAGGAAAAACCAATG 59.413 41.667 24.25 0.00 44.87 2.82
3138 10412 4.556233 GTTACTCCAGGAAAAACCAATGC 58.444 43.478 0.00 0.00 42.04 3.56
3139 10413 1.613437 ACTCCAGGAAAAACCAATGCG 59.387 47.619 0.00 0.00 42.04 4.73
3140 10414 1.885887 CTCCAGGAAAAACCAATGCGA 59.114 47.619 0.00 0.00 42.04 5.10
3141 10415 2.295909 CTCCAGGAAAAACCAATGCGAA 59.704 45.455 0.00 0.00 42.04 4.70
3142 10416 2.295909 TCCAGGAAAAACCAATGCGAAG 59.704 45.455 0.00 0.00 42.04 3.79
3155 10429 3.984241 CGAAGCGCGAGAACCTAG 58.016 61.111 12.10 0.00 44.57 3.02
3156 10430 1.586564 CGAAGCGCGAGAACCTAGG 60.587 63.158 12.10 7.41 44.57 3.02
3157 10431 1.878975 GAAGCGCGAGAACCTAGGC 60.879 63.158 12.10 0.00 0.00 3.93
3158 10432 2.558554 GAAGCGCGAGAACCTAGGCA 62.559 60.000 12.10 0.00 0.00 4.75
3159 10433 2.125673 GCGCGAGAACCTAGGCAA 60.126 61.111 12.10 0.00 0.00 4.52
3160 10434 1.740296 GCGCGAGAACCTAGGCAAA 60.740 57.895 12.10 0.00 0.00 3.68
3161 10435 1.967597 GCGCGAGAACCTAGGCAAAC 61.968 60.000 12.10 0.00 0.00 2.93
3162 10436 1.359459 CGCGAGAACCTAGGCAAACC 61.359 60.000 9.30 0.00 0.00 3.27
3163 10437 1.359459 GCGAGAACCTAGGCAAACCG 61.359 60.000 9.30 7.70 42.76 4.44
3164 10438 1.359459 CGAGAACCTAGGCAAACCGC 61.359 60.000 9.30 0.00 42.76 5.68
3165 10439 0.036294 GAGAACCTAGGCAAACCGCT 60.036 55.000 9.30 0.00 42.76 5.52
3166 10440 0.400594 AGAACCTAGGCAAACCGCTT 59.599 50.000 9.30 0.00 42.76 4.68
3167 10441 1.626825 AGAACCTAGGCAAACCGCTTA 59.373 47.619 9.30 0.00 42.76 3.09
3168 10442 2.039348 AGAACCTAGGCAAACCGCTTAA 59.961 45.455 9.30 0.00 42.76 1.85
3169 10443 2.572209 ACCTAGGCAAACCGCTTAAA 57.428 45.000 9.30 0.00 42.76 1.52
3170 10444 3.081710 ACCTAGGCAAACCGCTTAAAT 57.918 42.857 9.30 0.00 42.76 1.40
3171 10445 2.752903 ACCTAGGCAAACCGCTTAAATG 59.247 45.455 9.30 0.00 42.76 2.32
3172 10446 3.013921 CCTAGGCAAACCGCTTAAATGA 58.986 45.455 0.00 0.00 42.76 2.57
3173 10447 3.442273 CCTAGGCAAACCGCTTAAATGAA 59.558 43.478 0.00 0.00 42.76 2.57
3174 10448 4.082463 CCTAGGCAAACCGCTTAAATGAAA 60.082 41.667 0.00 0.00 42.76 2.69
3175 10449 3.649073 AGGCAAACCGCTTAAATGAAAC 58.351 40.909 0.00 0.00 42.76 2.78
3176 10450 3.068873 AGGCAAACCGCTTAAATGAAACA 59.931 39.130 0.00 0.00 42.76 2.83
3177 10451 3.804873 GGCAAACCGCTTAAATGAAACAA 59.195 39.130 0.00 0.00 41.91 2.83
3178 10452 4.318475 GGCAAACCGCTTAAATGAAACAAC 60.318 41.667 0.00 0.00 41.91 3.32
3179 10453 4.506288 GCAAACCGCTTAAATGAAACAACT 59.494 37.500 0.00 0.00 37.77 3.16
3180 10454 5.006261 GCAAACCGCTTAAATGAAACAACTT 59.994 36.000 0.00 0.00 37.77 2.66
3181 10455 6.199342 GCAAACCGCTTAAATGAAACAACTTA 59.801 34.615 0.00 0.00 37.77 2.24
3182 10456 7.254151 GCAAACCGCTTAAATGAAACAACTTAA 60.254 33.333 0.00 0.00 37.77 1.85
3183 10457 7.688478 AACCGCTTAAATGAAACAACTTAAC 57.312 32.000 0.00 0.00 0.00 2.01
3184 10458 6.210796 ACCGCTTAAATGAAACAACTTAACC 58.789 36.000 0.00 0.00 0.00 2.85
3185 10459 6.183360 ACCGCTTAAATGAAACAACTTAACCA 60.183 34.615 0.00 0.00 0.00 3.67
3186 10460 6.697892 CCGCTTAAATGAAACAACTTAACCAA 59.302 34.615 0.00 0.00 0.00 3.67
3187 10461 7.383843 CCGCTTAAATGAAACAACTTAACCAAT 59.616 33.333 0.00 0.00 0.00 3.16
3188 10462 8.213812 CGCTTAAATGAAACAACTTAACCAATG 58.786 33.333 0.00 0.00 0.00 2.82
3189 10463 8.009409 GCTTAAATGAAACAACTTAACCAATGC 58.991 33.333 0.00 0.00 0.00 3.56
3190 10464 8.948631 TTAAATGAAACAACTTAACCAATGCA 57.051 26.923 0.00 0.00 0.00 3.96
3191 10465 9.553064 TTAAATGAAACAACTTAACCAATGCAT 57.447 25.926 0.00 0.00 0.00 3.96
3192 10466 8.449251 AAATGAAACAACTTAACCAATGCATT 57.551 26.923 5.99 5.99 0.00 3.56
3193 10467 9.553064 AAATGAAACAACTTAACCAATGCATTA 57.447 25.926 12.53 0.00 0.00 1.90
3194 10468 9.553064 AATGAAACAACTTAACCAATGCATTAA 57.447 25.926 12.53 1.71 0.00 1.40
3195 10469 8.948631 TGAAACAACTTAACCAATGCATTAAA 57.051 26.923 12.53 3.83 0.00 1.52
3196 10470 9.039870 TGAAACAACTTAACCAATGCATTAAAG 57.960 29.630 12.53 14.67 0.00 1.85
3197 10471 9.255304 GAAACAACTTAACCAATGCATTAAAGA 57.745 29.630 12.53 0.00 0.00 2.52
3198 10472 8.587952 AACAACTTAACCAATGCATTAAAGAC 57.412 30.769 12.53 0.00 0.00 3.01
3199 10473 7.951591 ACAACTTAACCAATGCATTAAAGACT 58.048 30.769 12.53 4.65 0.00 3.24
3200 10474 8.421002 ACAACTTAACCAATGCATTAAAGACTT 58.579 29.630 12.53 3.16 0.00 3.01
3201 10475 9.260002 CAACTTAACCAATGCATTAAAGACTTT 57.740 29.630 12.53 5.62 0.00 2.66
3204 10478 9.573133 CTTAACCAATGCATTAAAGACTTTAGG 57.427 33.333 12.53 7.55 0.00 2.69
3205 10479 7.539034 AACCAATGCATTAAAGACTTTAGGT 57.461 32.000 12.53 8.21 0.00 3.08
3206 10480 6.924111 ACCAATGCATTAAAGACTTTAGGTG 58.076 36.000 12.53 11.33 0.00 4.00
3207 10481 5.807011 CCAATGCATTAAAGACTTTAGGTGC 59.193 40.000 25.39 25.39 38.22 5.01
3208 10482 6.350445 CCAATGCATTAAAGACTTTAGGTGCT 60.350 38.462 28.56 19.42 38.39 4.40
3209 10483 7.148086 CCAATGCATTAAAGACTTTAGGTGCTA 60.148 37.037 28.56 21.31 38.39 3.49
3210 10484 7.938140 ATGCATTAAAGACTTTAGGTGCTAA 57.062 32.000 28.56 19.12 38.39 3.09
3211 10485 7.377766 TGCATTAAAGACTTTAGGTGCTAAG 57.622 36.000 28.56 9.43 38.39 2.18
3212 10486 6.374333 TGCATTAAAGACTTTAGGTGCTAAGG 59.626 38.462 28.56 13.16 38.39 2.69
3213 10487 6.678164 GCATTAAAGACTTTAGGTGCTAAGGC 60.678 42.308 25.12 14.76 36.49 4.35
3214 10488 4.642466 AAAGACTTTAGGTGCTAAGGCT 57.358 40.909 0.00 0.00 39.59 4.58
3215 10489 3.618690 AGACTTTAGGTGCTAAGGCTG 57.381 47.619 0.00 0.00 39.59 4.85
3216 10490 2.907042 AGACTTTAGGTGCTAAGGCTGT 59.093 45.455 0.00 0.00 39.59 4.40
3217 10491 3.003480 GACTTTAGGTGCTAAGGCTGTG 58.997 50.000 0.00 0.00 39.59 3.66
3218 10492 2.372172 ACTTTAGGTGCTAAGGCTGTGT 59.628 45.455 0.00 0.00 39.59 3.72
3219 10493 3.181443 ACTTTAGGTGCTAAGGCTGTGTT 60.181 43.478 0.00 0.00 39.59 3.32
3220 10494 3.502123 TTAGGTGCTAAGGCTGTGTTT 57.498 42.857 0.00 0.00 39.59 2.83
3221 10495 1.609208 AGGTGCTAAGGCTGTGTTTG 58.391 50.000 0.00 0.00 39.59 2.93
3222 10496 0.598065 GGTGCTAAGGCTGTGTTTGG 59.402 55.000 0.00 0.00 39.59 3.28
3223 10497 1.318576 GTGCTAAGGCTGTGTTTGGT 58.681 50.000 0.00 0.00 39.59 3.67
3224 10498 1.681264 GTGCTAAGGCTGTGTTTGGTT 59.319 47.619 0.00 0.00 39.59 3.67
3225 10499 1.680735 TGCTAAGGCTGTGTTTGGTTG 59.319 47.619 0.00 0.00 39.59 3.77
3226 10500 1.953686 GCTAAGGCTGTGTTTGGTTGA 59.046 47.619 0.00 0.00 35.22 3.18
3227 10501 2.030805 GCTAAGGCTGTGTTTGGTTGAG 60.031 50.000 0.00 0.00 35.22 3.02
3228 10502 0.746659 AAGGCTGTGTTTGGTTGAGC 59.253 50.000 0.00 0.00 0.00 4.26
3229 10503 0.106519 AGGCTGTGTTTGGTTGAGCT 60.107 50.000 0.00 0.00 0.00 4.09
3230 10504 0.031178 GGCTGTGTTTGGTTGAGCTG 59.969 55.000 0.00 0.00 0.00 4.24
3231 10505 0.595825 GCTGTGTTTGGTTGAGCTGC 60.596 55.000 0.00 0.00 0.00 5.25
3232 10506 0.740149 CTGTGTTTGGTTGAGCTGCA 59.260 50.000 1.02 0.00 0.00 4.41
3233 10507 0.740149 TGTGTTTGGTTGAGCTGCAG 59.260 50.000 10.11 10.11 0.00 4.41
3234 10508 1.024271 GTGTTTGGTTGAGCTGCAGA 58.976 50.000 20.43 0.00 0.00 4.26
3235 10509 1.610522 GTGTTTGGTTGAGCTGCAGAT 59.389 47.619 20.43 12.64 0.00 2.90
3236 10510 2.035066 GTGTTTGGTTGAGCTGCAGATT 59.965 45.455 20.43 4.00 0.00 2.40
3237 10511 2.294233 TGTTTGGTTGAGCTGCAGATTC 59.706 45.455 20.43 14.56 0.00 2.52
3238 10512 2.555757 GTTTGGTTGAGCTGCAGATTCT 59.444 45.455 20.43 4.69 0.00 2.40
3239 10513 3.701205 TTGGTTGAGCTGCAGATTCTA 57.299 42.857 20.43 8.27 0.00 2.10
3240 10514 2.977914 TGGTTGAGCTGCAGATTCTAC 58.022 47.619 20.43 18.93 0.00 2.59
3241 10515 2.302733 TGGTTGAGCTGCAGATTCTACA 59.697 45.455 20.43 7.09 0.00 2.74
3242 10516 3.244526 TGGTTGAGCTGCAGATTCTACAA 60.245 43.478 20.43 8.95 0.00 2.41
3243 10517 3.753272 GGTTGAGCTGCAGATTCTACAAA 59.247 43.478 20.43 1.76 0.00 2.83
3244 10518 4.216257 GGTTGAGCTGCAGATTCTACAAAA 59.784 41.667 20.43 1.39 0.00 2.44
3245 10519 5.388944 GTTGAGCTGCAGATTCTACAAAAG 58.611 41.667 20.43 0.00 0.00 2.27
3246 10520 3.438087 TGAGCTGCAGATTCTACAAAAGC 59.562 43.478 20.43 0.00 0.00 3.51
3247 10521 3.683802 AGCTGCAGATTCTACAAAAGCT 58.316 40.909 20.43 0.00 35.02 3.74
3248 10522 3.439476 AGCTGCAGATTCTACAAAAGCTG 59.561 43.478 20.43 0.00 43.73 4.24
3252 10526 3.756069 CAGATTCTACAAAAGCTGCTGC 58.244 45.455 1.35 7.62 36.04 5.25
3253 10527 2.417933 AGATTCTACAAAAGCTGCTGCG 59.582 45.455 1.35 0.00 45.42 5.18
3254 10528 0.874390 TTCTACAAAAGCTGCTGCGG 59.126 50.000 1.35 3.55 45.42 5.69
3255 10529 0.034756 TCTACAAAAGCTGCTGCGGA 59.965 50.000 13.72 0.00 45.42 5.54
3256 10530 0.874390 CTACAAAAGCTGCTGCGGAA 59.126 50.000 13.72 0.00 45.42 4.30
3257 10531 1.266718 CTACAAAAGCTGCTGCGGAAA 59.733 47.619 13.72 0.00 45.42 3.13
3258 10532 0.459489 ACAAAAGCTGCTGCGGAAAA 59.541 45.000 13.72 0.00 45.42 2.29
3259 10533 1.134226 CAAAAGCTGCTGCGGAAAAG 58.866 50.000 13.72 0.00 45.42 2.27
3260 10534 0.598419 AAAAGCTGCTGCGGAAAAGC 60.598 50.000 13.72 6.74 45.42 3.51
3261 10535 2.282040 AGCTGCTGCGGAAAAGCT 60.282 55.556 13.72 9.22 45.42 3.74
3262 10536 2.126580 GCTGCTGCGGAAAAGCTG 60.127 61.111 13.72 0.00 41.42 4.24
3268 10542 2.256461 GCGGAAAAGCTGCTGTGG 59.744 61.111 1.35 0.00 45.70 4.17
3269 10543 2.260869 GCGGAAAAGCTGCTGTGGA 61.261 57.895 1.35 0.00 45.70 4.02
3270 10544 1.795170 GCGGAAAAGCTGCTGTGGAA 61.795 55.000 1.35 0.00 45.70 3.53
3271 10545 0.667993 CGGAAAAGCTGCTGTGGAAA 59.332 50.000 1.35 0.00 0.00 3.13
3272 10546 1.066908 CGGAAAAGCTGCTGTGGAAAA 59.933 47.619 1.35 0.00 0.00 2.29
3273 10547 2.747436 GGAAAAGCTGCTGTGGAAAAG 58.253 47.619 1.35 0.00 0.00 2.27
3281 10555 1.843992 GCTGTGGAAAAGCTGTTGTG 58.156 50.000 0.00 0.00 46.26 3.33
3282 10556 1.405105 GCTGTGGAAAAGCTGTTGTGA 59.595 47.619 0.00 0.00 46.26 3.58
3283 10557 2.159254 GCTGTGGAAAAGCTGTTGTGAA 60.159 45.455 0.00 0.00 46.26 3.18
3284 10558 3.675775 GCTGTGGAAAAGCTGTTGTGAAA 60.676 43.478 0.00 0.00 46.26 2.69
3285 10559 4.493547 CTGTGGAAAAGCTGTTGTGAAAA 58.506 39.130 0.00 0.00 0.00 2.29
3286 10560 5.083533 TGTGGAAAAGCTGTTGTGAAAAT 57.916 34.783 0.00 0.00 0.00 1.82
3287 10561 4.869297 TGTGGAAAAGCTGTTGTGAAAATG 59.131 37.500 0.00 0.00 0.00 2.32
3288 10562 3.870419 TGGAAAAGCTGTTGTGAAAATGC 59.130 39.130 0.00 0.00 0.00 3.56
3289 10563 4.122046 GGAAAAGCTGTTGTGAAAATGCT 58.878 39.130 0.00 0.00 0.00 3.79
3290 10564 4.025480 GGAAAAGCTGTTGTGAAAATGCTG 60.025 41.667 0.00 0.00 0.00 4.41
3291 10565 2.144482 AGCTGTTGTGAAAATGCTGC 57.856 45.000 0.00 0.00 0.00 5.25
3292 10566 1.684983 AGCTGTTGTGAAAATGCTGCT 59.315 42.857 0.00 0.00 0.00 4.24
3293 10567 1.790623 GCTGTTGTGAAAATGCTGCTG 59.209 47.619 0.00 0.00 0.00 4.41
3294 10568 2.800629 GCTGTTGTGAAAATGCTGCTGT 60.801 45.455 0.00 0.00 0.00 4.40
3295 10569 2.792674 CTGTTGTGAAAATGCTGCTGTG 59.207 45.455 0.00 0.00 0.00 3.66
3296 10570 2.129607 GTTGTGAAAATGCTGCTGTGG 58.870 47.619 0.00 0.00 0.00 4.17
3297 10571 1.689984 TGTGAAAATGCTGCTGTGGA 58.310 45.000 0.00 0.00 0.00 4.02
3298 10572 2.030371 TGTGAAAATGCTGCTGTGGAA 58.970 42.857 0.00 0.00 0.00 3.53
3299 10573 2.429971 TGTGAAAATGCTGCTGTGGAAA 59.570 40.909 0.00 0.00 0.00 3.13
3300 10574 3.118847 TGTGAAAATGCTGCTGTGGAAAA 60.119 39.130 0.00 0.00 0.00 2.29
3301 10575 3.492011 GTGAAAATGCTGCTGTGGAAAAG 59.508 43.478 0.00 0.00 0.00 2.27
3334 10608 6.308710 GTTTGGTTAAAACGACTGTGAAAC 57.691 37.500 0.00 0.00 38.92 2.78
3335 10609 5.883503 TTGGTTAAAACGACTGTGAAACT 57.116 34.783 0.00 0.00 38.04 2.66
3336 10610 5.224562 TGGTTAAAACGACTGTGAAACTG 57.775 39.130 0.00 0.00 42.04 3.16
3337 10611 8.256043 GTTTGGTTAAAACGACTGTGAAACTGT 61.256 37.037 0.00 0.00 43.97 3.55
3348 10622 5.288543 CTGTGAAACTGTAGATTTGGCTC 57.711 43.478 0.00 0.00 38.04 4.70
3349 10623 4.713553 TGTGAAACTGTAGATTTGGCTCA 58.286 39.130 0.00 0.00 38.04 4.26
3350 10624 5.129634 TGTGAAACTGTAGATTTGGCTCAA 58.870 37.500 0.00 0.00 38.04 3.02
3351 10625 5.592282 TGTGAAACTGTAGATTTGGCTCAAA 59.408 36.000 3.33 3.33 36.20 2.69
3352 10626 6.265196 TGTGAAACTGTAGATTTGGCTCAAAT 59.735 34.615 11.47 11.47 41.47 2.32
3353 10627 7.147976 GTGAAACTGTAGATTTGGCTCAAATT 58.852 34.615 12.51 7.24 43.05 1.82
3354 10628 7.653311 GTGAAACTGTAGATTTGGCTCAAATTT 59.347 33.333 12.51 10.24 43.05 1.82
3355 10629 8.203485 TGAAACTGTAGATTTGGCTCAAATTTT 58.797 29.630 12.51 8.88 43.05 1.82
3356 10630 8.593492 AAACTGTAGATTTGGCTCAAATTTTC 57.407 30.769 12.51 7.37 43.05 2.29
3357 10631 6.691508 ACTGTAGATTTGGCTCAAATTTTCC 58.308 36.000 12.51 0.00 43.05 3.13
3358 10632 5.708948 TGTAGATTTGGCTCAAATTTTCCG 58.291 37.500 12.51 0.00 43.05 4.30
3359 10633 4.871933 AGATTTGGCTCAAATTTTCCGT 57.128 36.364 12.51 0.00 43.05 4.69
3360 10634 5.975693 AGATTTGGCTCAAATTTTCCGTA 57.024 34.783 12.51 0.00 43.05 4.02
3361 10635 6.339587 AGATTTGGCTCAAATTTTCCGTAA 57.660 33.333 12.51 0.00 43.05 3.18
3362 10636 6.935167 AGATTTGGCTCAAATTTTCCGTAAT 58.065 32.000 12.51 0.00 43.05 1.89
3363 10637 6.813152 AGATTTGGCTCAAATTTTCCGTAATG 59.187 34.615 12.51 0.00 43.05 1.90
3364 10638 3.843999 TGGCTCAAATTTTCCGTAATGC 58.156 40.909 0.00 0.00 0.00 3.56
3365 10639 3.186909 GGCTCAAATTTTCCGTAATGCC 58.813 45.455 0.00 0.00 0.00 4.40
3366 10640 3.186909 GCTCAAATTTTCCGTAATGCCC 58.813 45.455 0.00 0.00 0.00 5.36
3367 10641 3.780902 CTCAAATTTTCCGTAATGCCCC 58.219 45.455 0.00 0.00 0.00 5.80
3368 10642 3.436243 TCAAATTTTCCGTAATGCCCCT 58.564 40.909 0.00 0.00 0.00 4.79
3369 10643 4.601084 TCAAATTTTCCGTAATGCCCCTA 58.399 39.130 0.00 0.00 0.00 3.53
3370 10644 4.642885 TCAAATTTTCCGTAATGCCCCTAG 59.357 41.667 0.00 0.00 0.00 3.02
3371 10645 2.721425 TTTTCCGTAATGCCCCTAGG 57.279 50.000 0.06 0.06 0.00 3.02
3372 10646 1.882308 TTTCCGTAATGCCCCTAGGA 58.118 50.000 11.48 0.00 33.47 2.94
3373 10647 1.125633 TTCCGTAATGCCCCTAGGAC 58.874 55.000 11.48 2.11 33.47 3.85
3374 10648 0.761702 TCCGTAATGCCCCTAGGACC 60.762 60.000 11.48 0.48 33.47 4.46
3375 10649 0.763223 CCGTAATGCCCCTAGGACCT 60.763 60.000 11.48 0.00 33.47 3.85
3376 10650 0.393077 CGTAATGCCCCTAGGACCTG 59.607 60.000 11.48 0.00 33.47 4.00
3377 10651 1.802553 GTAATGCCCCTAGGACCTGA 58.197 55.000 11.48 0.00 33.47 3.86
3378 10652 1.694696 GTAATGCCCCTAGGACCTGAG 59.305 57.143 11.48 0.00 33.47 3.35
3379 10653 0.044855 AATGCCCCTAGGACCTGAGT 59.955 55.000 11.48 0.00 33.47 3.41
3380 10654 0.692419 ATGCCCCTAGGACCTGAGTG 60.692 60.000 11.48 0.00 33.47 3.51
3381 10655 1.001760 GCCCCTAGGACCTGAGTGA 59.998 63.158 11.48 0.00 33.47 3.41
3382 10656 0.617820 GCCCCTAGGACCTGAGTGAA 60.618 60.000 11.48 0.00 33.47 3.18
3383 10657 1.972207 GCCCCTAGGACCTGAGTGAAT 60.972 57.143 11.48 0.00 33.47 2.57
3384 10658 2.693074 GCCCCTAGGACCTGAGTGAATA 60.693 54.545 11.48 0.00 33.47 1.75
3385 10659 3.863086 CCCCTAGGACCTGAGTGAATAT 58.137 50.000 11.48 0.00 33.47 1.28
3386 10660 3.580458 CCCCTAGGACCTGAGTGAATATG 59.420 52.174 11.48 0.00 33.47 1.78
3387 10661 4.227197 CCCTAGGACCTGAGTGAATATGT 58.773 47.826 11.48 0.00 0.00 2.29
3388 10662 4.656112 CCCTAGGACCTGAGTGAATATGTT 59.344 45.833 11.48 0.00 0.00 2.71
3389 10663 5.131142 CCCTAGGACCTGAGTGAATATGTTT 59.869 44.000 11.48 0.00 0.00 2.83
3390 10664 6.326583 CCCTAGGACCTGAGTGAATATGTTTA 59.673 42.308 11.48 0.00 0.00 2.01
3391 10665 7.016661 CCCTAGGACCTGAGTGAATATGTTTAT 59.983 40.741 11.48 0.00 0.00 1.40
3392 10666 9.090103 CCTAGGACCTGAGTGAATATGTTTATA 57.910 37.037 1.05 0.00 0.00 0.98
3395 10669 7.880195 AGGACCTGAGTGAATATGTTTATATGC 59.120 37.037 0.00 0.00 30.00 3.14
3396 10670 7.880195 GGACCTGAGTGAATATGTTTATATGCT 59.120 37.037 0.00 0.00 30.00 3.79
3397 10671 9.929180 GACCTGAGTGAATATGTTTATATGCTA 57.071 33.333 0.00 0.00 30.00 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 60 7.979444 AGTACTTGCATGTAAACTTACACAT 57.021 32.000 13.52 0.00 45.47 3.21
208 216 5.354234 AGGAATGAATTAGTTGCAACGGTAG 59.646 40.000 23.21 0.00 0.00 3.18
234 242 7.256154 TTCGCAGAAAAGGGAAAAATTCCTAAT 60.256 33.333 8.89 0.00 46.39 1.73
247 255 3.506067 AGTGGTATTTTCGCAGAAAAGGG 59.494 43.478 17.13 0.00 45.90 3.95
412 482 6.202954 GCAGCCGTAAGACAACTTCATATATT 59.797 38.462 0.00 0.00 43.02 1.28
457 620 1.388547 TATGATTCTTTGGGCCGTGC 58.611 50.000 0.00 0.00 0.00 5.34
508 671 1.124297 CTGGACGTCAATCAACGAACG 59.876 52.381 18.91 0.00 45.37 3.95
511 675 0.669318 GGCTGGACGTCAATCAACGA 60.669 55.000 18.91 0.00 45.37 3.85
515 679 2.434185 GCGGCTGGACGTCAATCA 60.434 61.111 18.91 5.32 35.98 2.57
537 701 9.416794 CTTGCTCTATTAATACGTGAATGAGAT 57.583 33.333 0.00 0.00 0.00 2.75
538 702 7.867909 CCTTGCTCTATTAATACGTGAATGAGA 59.132 37.037 0.00 0.00 0.00 3.27
539 703 7.867909 TCCTTGCTCTATTAATACGTGAATGAG 59.132 37.037 0.00 6.55 0.00 2.90
540 704 7.722363 TCCTTGCTCTATTAATACGTGAATGA 58.278 34.615 0.00 0.00 0.00 2.57
541 705 7.946655 TCCTTGCTCTATTAATACGTGAATG 57.053 36.000 0.00 0.00 0.00 2.67
542 706 8.958119 TTTCCTTGCTCTATTAATACGTGAAT 57.042 30.769 0.00 0.00 0.00 2.57
543 707 8.780846 TTTTCCTTGCTCTATTAATACGTGAA 57.219 30.769 0.00 0.00 0.00 3.18
544 708 8.038944 ACTTTTCCTTGCTCTATTAATACGTGA 58.961 33.333 0.00 0.00 0.00 4.35
545 709 8.197988 ACTTTTCCTTGCTCTATTAATACGTG 57.802 34.615 0.00 0.00 0.00 4.49
546 710 8.258708 AGACTTTTCCTTGCTCTATTAATACGT 58.741 33.333 0.00 0.00 0.00 3.57
547 711 8.649973 AGACTTTTCCTTGCTCTATTAATACG 57.350 34.615 0.00 0.00 0.00 3.06
549 713 9.959721 ACAAGACTTTTCCTTGCTCTATTAATA 57.040 29.630 0.00 0.00 43.45 0.98
550 714 8.734386 CACAAGACTTTTCCTTGCTCTATTAAT 58.266 33.333 0.00 0.00 43.45 1.40
551 715 7.719633 ACACAAGACTTTTCCTTGCTCTATTAA 59.280 33.333 0.00 0.00 43.45 1.40
552 716 7.224297 ACACAAGACTTTTCCTTGCTCTATTA 58.776 34.615 0.00 0.00 43.45 0.98
553 717 6.064717 ACACAAGACTTTTCCTTGCTCTATT 58.935 36.000 0.00 0.00 43.45 1.73
554 718 5.625150 ACACAAGACTTTTCCTTGCTCTAT 58.375 37.500 0.00 0.00 43.45 1.98
555 719 5.036117 ACACAAGACTTTTCCTTGCTCTA 57.964 39.130 0.00 0.00 43.45 2.43
591 756 0.249155 GATGCATCCACGCCCAATTG 60.249 55.000 16.23 0.00 0.00 2.32
596 761 1.890979 CTCTGATGCATCCACGCCC 60.891 63.158 23.67 0.00 0.00 6.13
601 766 1.227060 CGCGTCTCTGATGCATCCA 60.227 57.895 23.67 9.58 43.95 3.41
645 810 2.819595 CATCGACCAGGCCGTTGG 60.820 66.667 9.48 9.48 44.09 3.77
646 811 2.819595 CCATCGACCAGGCCGTTG 60.820 66.667 0.00 0.00 0.00 4.10
665 830 3.056107 ACGCACTATGTATGTGTGGAAGT 60.056 43.478 11.26 0.00 46.50 3.01
678 864 1.327460 GTGGTGTATGCACGCACTATG 59.673 52.381 20.26 0.00 46.13 2.23
679 865 1.651987 GTGGTGTATGCACGCACTAT 58.348 50.000 20.26 0.00 46.13 2.12
680 866 0.734597 CGTGGTGTATGCACGCACTA 60.735 55.000 22.82 11.98 46.13 2.74
681 867 2.027073 CGTGGTGTATGCACGCACT 61.027 57.895 22.82 0.00 46.13 4.40
692 878 1.813513 AGCTAGTACGTACGTGGTGT 58.186 50.000 30.25 13.93 0.00 4.16
696 882 2.174764 CAGCAAGCTAGTACGTACGTG 58.825 52.381 30.25 14.77 0.00 4.49
697 883 1.808945 ACAGCAAGCTAGTACGTACGT 59.191 47.619 25.98 25.98 0.00 3.57
698 884 2.159612 TCACAGCAAGCTAGTACGTACG 60.160 50.000 19.49 15.01 0.00 3.67
699 885 3.169733 GTCACAGCAAGCTAGTACGTAC 58.830 50.000 18.10 18.10 0.00 3.67
700 886 2.815503 TGTCACAGCAAGCTAGTACGTA 59.184 45.455 0.00 0.00 0.00 3.57
701 887 1.611977 TGTCACAGCAAGCTAGTACGT 59.388 47.619 0.00 0.00 0.00 3.57
702 888 1.986378 GTGTCACAGCAAGCTAGTACG 59.014 52.381 0.00 0.00 0.00 3.67
703 889 3.057174 AGAGTGTCACAGCAAGCTAGTAC 60.057 47.826 5.62 0.00 0.00 2.73
704 890 3.157881 AGAGTGTCACAGCAAGCTAGTA 58.842 45.455 5.62 0.00 0.00 1.82
705 891 1.967066 AGAGTGTCACAGCAAGCTAGT 59.033 47.619 5.62 0.00 0.00 2.57
706 892 2.739885 AGAGTGTCACAGCAAGCTAG 57.260 50.000 5.62 0.00 0.00 3.42
716 902 0.387929 TGACGTGGGAAGAGTGTCAC 59.612 55.000 0.00 0.00 34.85 3.67
727 913 0.389391 AGTGAGTGAAGTGACGTGGG 59.611 55.000 0.00 0.00 0.00 4.61
744 930 3.454812 AGTTAGTTTGGTCCAGTGACAGT 59.545 43.478 0.00 0.00 43.65 3.55
747 933 6.018180 CACTTTAGTTAGTTTGGTCCAGTGAC 60.018 42.308 0.00 0.00 40.98 3.67
748 934 6.053005 CACTTTAGTTAGTTTGGTCCAGTGA 58.947 40.000 0.00 0.00 31.47 3.41
749 935 6.053005 TCACTTTAGTTAGTTTGGTCCAGTG 58.947 40.000 0.00 0.00 0.00 3.66
750 936 6.243216 TCACTTTAGTTAGTTTGGTCCAGT 57.757 37.500 0.00 0.00 0.00 4.00
751 937 5.179555 GCTCACTTTAGTTAGTTTGGTCCAG 59.820 44.000 0.00 0.00 0.00 3.86
752 938 5.061179 GCTCACTTTAGTTAGTTTGGTCCA 58.939 41.667 0.00 0.00 0.00 4.02
753 939 5.049612 GTGCTCACTTTAGTTAGTTTGGTCC 60.050 44.000 0.00 0.00 0.00 4.46
774 960 0.881796 GCTAACCAAGAACCAGGTGC 59.118 55.000 0.00 0.00 38.37 5.01
793 987 3.488721 GCTTTCATTATGAGCTGCAGTGG 60.489 47.826 16.64 0.00 33.72 4.00
794 988 3.377485 AGCTTTCATTATGAGCTGCAGTG 59.623 43.478 16.64 3.58 44.53 3.66
810 1004 5.006165 GCATATATAGGCGACATGAGCTTTC 59.994 44.000 3.26 2.46 34.52 2.62
813 1007 3.181471 GGCATATATAGGCGACATGAGCT 60.181 47.826 12.84 0.00 33.08 4.09
855 1054 0.098025 AACGTTTGCAGTTGTGGTCG 59.902 50.000 0.00 0.00 0.00 4.79
883 1083 3.325753 GAGCACAGGAGCAGGGGT 61.326 66.667 0.00 0.00 36.85 4.95
884 1084 4.106925 GGAGCACAGGAGCAGGGG 62.107 72.222 0.00 0.00 36.85 4.79
886 1086 2.268280 CAGGAGCACAGGAGCAGG 59.732 66.667 0.00 0.00 36.85 4.85
889 1089 2.125188 GAGCAGGAGCACAGGAGC 60.125 66.667 0.00 0.00 45.49 4.70
895 1095 2.099431 CGAAGCAGAGCAGGAGCAC 61.099 63.158 0.00 0.00 45.49 4.40
897 1097 1.079543 TTCGAAGCAGAGCAGGAGC 60.080 57.895 0.00 0.00 42.56 4.70
900 1100 1.004560 TGGTTCGAAGCAGAGCAGG 60.005 57.895 25.16 0.00 31.91 4.85
907 1107 1.891919 GTGCACCTGGTTCGAAGCA 60.892 57.895 26.79 26.79 34.85 3.91
911 1121 0.468226 AAAGAGTGCACCTGGTTCGA 59.532 50.000 14.63 0.00 0.00 3.71
913 1127 1.807142 GCTAAAGAGTGCACCTGGTTC 59.193 52.381 14.63 3.82 0.00 3.62
924 1138 2.415625 CGGTTCGTGCTAGCTAAAGAGT 60.416 50.000 17.23 0.00 0.00 3.24
941 1155 2.032681 GCAGAGCAGTTCCCGGTT 59.967 61.111 0.00 0.00 0.00 4.44
1032 1254 1.134280 CATTTCACCAGAGGGATCGCT 60.134 52.381 12.81 12.81 38.05 4.93
1140 1371 1.376037 GGTCACCCTGAAGAAGCCG 60.376 63.158 0.00 0.00 0.00 5.52
1637 4310 3.410788 ATGATCTGGAGGCCCCCGA 62.411 63.158 0.00 2.62 32.52 5.14
1739 4413 2.076863 GAGTGAGTGGTAATGGTGTGC 58.923 52.381 0.00 0.00 0.00 4.57
1760 4446 1.080772 GGCGGCAAAGGTAACAAGC 60.081 57.895 3.07 0.00 41.41 4.01
1784 4470 6.216456 GGATCCCAGGTATTCCTAGATGAATT 59.784 42.308 0.00 0.00 43.07 2.17
1795 4481 2.289694 CGTCCATGGATCCCAGGTATTC 60.290 54.545 19.62 0.00 36.75 1.75
1797 4483 1.352083 CGTCCATGGATCCCAGGTAT 58.648 55.000 19.62 0.00 36.75 2.73
1889 4685 3.004024 GGTACGTCGTTGACAAGAAGA 57.996 47.619 1.78 0.00 32.09 2.87
1930 4732 0.814010 GCGCCAATGAGTTATCGGGT 60.814 55.000 0.00 0.00 0.00 5.28
2007 4844 0.932399 AACGTACTGGTGCAACGAAC 59.068 50.000 14.34 3.05 39.80 3.95
2027 4878 2.748461 TGCGTGTAAAAACAGTCTGC 57.252 45.000 0.00 0.00 0.00 4.26
2068 5188 3.068024 TCAGCACCTGAAATTCACCAAAC 59.932 43.478 0.00 0.00 37.57 2.93
2341 6258 1.668151 GTGGTCGGAGCTGTTGGTC 60.668 63.158 8.82 0.00 39.76 4.02
2342 6259 2.426023 GTGGTCGGAGCTGTTGGT 59.574 61.111 8.82 0.00 0.00 3.67
2343 6260 2.358737 GGTGGTCGGAGCTGTTGG 60.359 66.667 8.82 0.00 0.00 3.77
2344 6261 1.961277 GTGGTGGTCGGAGCTGTTG 60.961 63.158 8.82 0.00 0.00 3.33
2345 6262 2.140792 AGTGGTGGTCGGAGCTGTT 61.141 57.895 8.82 0.00 0.00 3.16
2346 6263 2.524394 AGTGGTGGTCGGAGCTGT 60.524 61.111 8.82 0.00 0.00 4.40
2347 6264 2.047844 CAGTGGTGGTCGGAGCTG 60.048 66.667 8.82 0.00 0.00 4.24
2348 6265 4.008933 GCAGTGGTGGTCGGAGCT 62.009 66.667 8.82 0.00 0.00 4.09
2349 6266 4.314440 TGCAGTGGTGGTCGGAGC 62.314 66.667 0.00 0.00 0.00 4.70
2350 6267 2.047844 CTGCAGTGGTGGTCGGAG 60.048 66.667 5.25 0.00 0.00 4.63
2351 6268 4.314440 GCTGCAGTGGTGGTCGGA 62.314 66.667 16.64 0.00 0.00 4.55
2355 6272 4.193893 TGCTGCTGCAGTGGTGGT 62.194 61.111 28.50 0.00 45.31 4.16
2431 7545 9.593134 GTCACTAGTACTAAGCTAACTACACTA 57.407 37.037 3.76 0.00 0.00 2.74
2517 7831 8.661257 GCAACAACAAATACCACTTTAAGTTTT 58.339 29.630 0.00 0.00 0.00 2.43
2521 7835 6.200097 GGTGCAACAACAAATACCACTTTAAG 59.800 38.462 0.00 0.00 39.98 1.85
2522 7836 6.043411 GGTGCAACAACAAATACCACTTTAA 58.957 36.000 0.00 0.00 39.98 1.52
2523 7837 5.452077 GGGTGCAACAACAAATACCACTTTA 60.452 40.000 3.06 0.00 39.98 1.85
2524 7838 4.438148 GGTGCAACAACAAATACCACTTT 58.562 39.130 0.00 0.00 39.98 2.66
2525 7839 3.181470 GGGTGCAACAACAAATACCACTT 60.181 43.478 3.06 0.00 39.98 3.16
2533 7847 0.539051 CCCAAGGGTGCAACAACAAA 59.461 50.000 3.06 0.00 39.98 2.83
2631 9885 4.946157 ACAAAAGGGAGTTCTGCATATCTG 59.054 41.667 0.00 0.00 0.00 2.90
2706 9968 0.762418 CCATGCTATCCCGGGTACAA 59.238 55.000 22.86 0.00 0.00 2.41
2716 9978 3.806625 AAATTGTGGTGCCATGCTATC 57.193 42.857 0.00 0.00 0.00 2.08
2756 10018 7.798486 ATGCGTCTATTTATGAACGTCTATC 57.202 36.000 0.00 0.00 0.00 2.08
2770 10032 9.244292 TCATAAGGAAGAGTATATGCGTCTATT 57.756 33.333 0.00 0.00 0.00 1.73
2802 10064 2.373540 AGGAATAAAGTACGTGCGCA 57.626 45.000 5.66 5.66 0.00 6.09
2817 10079 4.017126 TCTCTCGAAGATGCTTGTAGGAA 58.983 43.478 0.00 0.00 33.89 3.36
2818 10080 3.378742 GTCTCTCGAAGATGCTTGTAGGA 59.621 47.826 0.00 0.00 36.11 2.94
2819 10081 3.380004 AGTCTCTCGAAGATGCTTGTAGG 59.620 47.826 0.00 0.00 36.11 3.18
2823 10085 3.500558 TCAGTCTCTCGAAGATGCTTG 57.499 47.619 0.00 0.00 36.11 4.01
2847 10109 9.341899 GCTTCGTTAATCTTAAAATGATGTGTT 57.658 29.630 0.00 0.00 0.00 3.32
2893 10155 3.809832 CGGCGGAAGATATTTTCATCAGT 59.190 43.478 8.15 0.00 0.00 3.41
2894 10156 4.058124 TCGGCGGAAGATATTTTCATCAG 58.942 43.478 7.21 0.91 0.00 2.90
2895 10157 4.066646 TCGGCGGAAGATATTTTCATCA 57.933 40.909 7.21 0.00 0.00 3.07
2898 10160 5.237779 GGTATTTCGGCGGAAGATATTTTCA 59.762 40.000 6.80 0.00 32.80 2.69
2904 10166 2.960384 TCAGGTATTTCGGCGGAAGATA 59.040 45.455 6.80 5.97 32.80 1.98
2969 10232 7.449086 TGGTTAGGTTTTTGTGGTAGAATTAGG 59.551 37.037 0.00 0.00 0.00 2.69
2972 10235 7.343574 AGTTGGTTAGGTTTTTGTGGTAGAATT 59.656 33.333 0.00 0.00 0.00 2.17
2973 10236 6.837048 AGTTGGTTAGGTTTTTGTGGTAGAAT 59.163 34.615 0.00 0.00 0.00 2.40
2974 10237 6.095720 CAGTTGGTTAGGTTTTTGTGGTAGAA 59.904 38.462 0.00 0.00 0.00 2.10
2976 10239 5.591067 TCAGTTGGTTAGGTTTTTGTGGTAG 59.409 40.000 0.00 0.00 0.00 3.18
2977 10240 5.507637 TCAGTTGGTTAGGTTTTTGTGGTA 58.492 37.500 0.00 0.00 0.00 3.25
2981 10244 5.301805 CCAGATCAGTTGGTTAGGTTTTTGT 59.698 40.000 0.00 0.00 0.00 2.83
2982 10245 5.772521 CCAGATCAGTTGGTTAGGTTTTTG 58.227 41.667 0.00 0.00 0.00 2.44
2993 10267 0.250858 TGTGGTGCCAGATCAGTTGG 60.251 55.000 0.00 0.00 38.78 3.77
3005 10279 0.817654 GAAGGGCCTAATTGTGGTGC 59.182 55.000 6.41 0.00 0.00 5.01
3018 10292 3.650950 TGGAGCACTGGGAAGGGC 61.651 66.667 0.00 0.00 0.00 5.19
3019 10293 2.352805 GTGGAGCACTGGGAAGGG 59.647 66.667 0.00 0.00 0.00 3.95
3020 10294 2.046892 CGTGGAGCACTGGGAAGG 60.047 66.667 0.00 0.00 31.34 3.46
3021 10295 2.046892 CCGTGGAGCACTGGGAAG 60.047 66.667 0.00 0.00 31.34 3.46
3022 10296 2.847234 ACCGTGGAGCACTGGGAA 60.847 61.111 0.00 0.00 34.29 3.97
3023 10297 3.625897 CACCGTGGAGCACTGGGA 61.626 66.667 0.00 0.00 34.29 4.37
3024 10298 4.704833 CCACCGTGGAGCACTGGG 62.705 72.222 12.68 0.00 40.96 4.45
3025 10299 3.625897 TCCACCGTGGAGCACTGG 61.626 66.667 16.73 0.00 42.67 4.00
3032 10306 3.936203 GCACCTGTCCACCGTGGA 61.936 66.667 16.73 16.73 45.98 4.02
3033 10307 2.107041 TTAGCACCTGTCCACCGTGG 62.107 60.000 11.73 11.73 39.43 4.94
3034 10308 0.670546 CTTAGCACCTGTCCACCGTG 60.671 60.000 0.00 0.00 0.00 4.94
3035 10309 1.671742 CTTAGCACCTGTCCACCGT 59.328 57.895 0.00 0.00 0.00 4.83
3036 10310 1.741770 GCTTAGCACCTGTCCACCG 60.742 63.158 0.00 0.00 0.00 4.94
3037 10311 0.035056 ATGCTTAGCACCTGTCCACC 60.035 55.000 9.82 0.00 43.04 4.61
3038 10312 1.089920 CATGCTTAGCACCTGTCCAC 58.910 55.000 9.82 0.00 43.04 4.02
3039 10313 0.677731 GCATGCTTAGCACCTGTCCA 60.678 55.000 9.82 0.00 43.04 4.02
3040 10314 1.379642 GGCATGCTTAGCACCTGTCC 61.380 60.000 18.92 7.22 43.04 4.02
3041 10315 0.677731 TGGCATGCTTAGCACCTGTC 60.678 55.000 18.92 7.31 43.04 3.51
3042 10316 0.962356 GTGGCATGCTTAGCACCTGT 60.962 55.000 18.92 0.00 43.04 4.00
3043 10317 0.961857 TGTGGCATGCTTAGCACCTG 60.962 55.000 18.92 6.22 43.04 4.00
3044 10318 0.033796 ATGTGGCATGCTTAGCACCT 60.034 50.000 18.92 7.18 43.04 4.00
3045 10319 1.679139 TATGTGGCATGCTTAGCACC 58.321 50.000 18.92 8.08 43.04 5.01
3046 10320 2.542411 GCTTATGTGGCATGCTTAGCAC 60.542 50.000 18.92 16.85 43.04 4.40
3047 10321 1.677576 GCTTATGTGGCATGCTTAGCA 59.322 47.619 18.92 10.09 44.86 3.49
3048 10322 1.677576 TGCTTATGTGGCATGCTTAGC 59.322 47.619 18.92 12.72 34.56 3.09
3049 10323 4.374843 TTTGCTTATGTGGCATGCTTAG 57.625 40.909 18.92 1.84 39.54 2.18
3050 10324 4.797800 TTTTGCTTATGTGGCATGCTTA 57.202 36.364 18.92 4.21 39.54 3.09
3051 10325 3.681593 TTTTGCTTATGTGGCATGCTT 57.318 38.095 18.92 3.00 39.54 3.91
3052 10326 3.681593 TTTTTGCTTATGTGGCATGCT 57.318 38.095 18.92 0.00 39.54 3.79
3071 10345 7.714377 TCTTAAATGTTGTGCCATGTCATTTTT 59.286 29.630 0.00 0.00 38.83 1.94
3072 10346 7.215789 TCTTAAATGTTGTGCCATGTCATTTT 58.784 30.769 0.00 0.00 38.83 1.82
3073 10347 6.757237 TCTTAAATGTTGTGCCATGTCATTT 58.243 32.000 0.00 0.00 40.32 2.32
3074 10348 6.343716 TCTTAAATGTTGTGCCATGTCATT 57.656 33.333 0.00 0.00 0.00 2.57
3075 10349 5.981088 TCTTAAATGTTGTGCCATGTCAT 57.019 34.783 0.00 0.00 0.00 3.06
3076 10350 5.278907 CCTTCTTAAATGTTGTGCCATGTCA 60.279 40.000 0.00 0.00 0.00 3.58
3077 10351 5.163513 CCTTCTTAAATGTTGTGCCATGTC 58.836 41.667 0.00 0.00 0.00 3.06
3078 10352 4.021192 CCCTTCTTAAATGTTGTGCCATGT 60.021 41.667 0.00 0.00 0.00 3.21
3079 10353 4.497300 CCCTTCTTAAATGTTGTGCCATG 58.503 43.478 0.00 0.00 0.00 3.66
3080 10354 3.515104 CCCCTTCTTAAATGTTGTGCCAT 59.485 43.478 0.00 0.00 0.00 4.40
3081 10355 2.896685 CCCCTTCTTAAATGTTGTGCCA 59.103 45.455 0.00 0.00 0.00 4.92
3082 10356 3.161866 TCCCCTTCTTAAATGTTGTGCC 58.838 45.455 0.00 0.00 0.00 5.01
3083 10357 4.079253 TCTCCCCTTCTTAAATGTTGTGC 58.921 43.478 0.00 0.00 0.00 4.57
3084 10358 5.560724 TCTCTCCCCTTCTTAAATGTTGTG 58.439 41.667 0.00 0.00 0.00 3.33
3085 10359 5.804771 GCTCTCTCCCCTTCTTAAATGTTGT 60.805 44.000 0.00 0.00 0.00 3.32
3086 10360 4.637977 GCTCTCTCCCCTTCTTAAATGTTG 59.362 45.833 0.00 0.00 0.00 3.33
3087 10361 4.289672 TGCTCTCTCCCCTTCTTAAATGTT 59.710 41.667 0.00 0.00 0.00 2.71
3088 10362 3.846588 TGCTCTCTCCCCTTCTTAAATGT 59.153 43.478 0.00 0.00 0.00 2.71
3089 10363 4.080638 AGTGCTCTCTCCCCTTCTTAAATG 60.081 45.833 0.00 0.00 0.00 2.32
3090 10364 4.107820 AGTGCTCTCTCCCCTTCTTAAAT 58.892 43.478 0.00 0.00 0.00 1.40
3091 10365 3.521727 AGTGCTCTCTCCCCTTCTTAAA 58.478 45.455 0.00 0.00 0.00 1.52
3092 10366 3.191888 AGTGCTCTCTCCCCTTCTTAA 57.808 47.619 0.00 0.00 0.00 1.85
3093 10367 2.930109 AGTGCTCTCTCCCCTTCTTA 57.070 50.000 0.00 0.00 0.00 2.10
3094 10368 2.037385 AAGTGCTCTCTCCCCTTCTT 57.963 50.000 0.00 0.00 0.00 2.52
3095 10369 1.627834 CAAAGTGCTCTCTCCCCTTCT 59.372 52.381 0.00 0.00 0.00 2.85
3096 10370 1.339535 CCAAAGTGCTCTCTCCCCTTC 60.340 57.143 0.00 0.00 0.00 3.46
3097 10371 0.695347 CCAAAGTGCTCTCTCCCCTT 59.305 55.000 0.00 0.00 0.00 3.95
3098 10372 0.474660 ACCAAAGTGCTCTCTCCCCT 60.475 55.000 0.00 0.00 0.00 4.79
3099 10373 0.402121 AACCAAAGTGCTCTCTCCCC 59.598 55.000 0.00 0.00 0.00 4.81
3100 10374 2.303311 AGTAACCAAAGTGCTCTCTCCC 59.697 50.000 0.00 0.00 0.00 4.30
3101 10375 3.591023 GAGTAACCAAAGTGCTCTCTCC 58.409 50.000 0.00 0.00 0.00 3.71
3102 10376 3.006967 TGGAGTAACCAAAGTGCTCTCTC 59.993 47.826 0.00 0.00 46.75 3.20
3103 10377 2.972713 TGGAGTAACCAAAGTGCTCTCT 59.027 45.455 0.00 0.00 46.75 3.10
3104 10378 3.402628 TGGAGTAACCAAAGTGCTCTC 57.597 47.619 0.00 0.00 46.75 3.20
3115 10389 4.560716 GCATTGGTTTTTCCTGGAGTAACC 60.561 45.833 24.24 24.24 38.92 2.85
3116 10390 4.556233 GCATTGGTTTTTCCTGGAGTAAC 58.444 43.478 12.15 12.15 37.07 2.50
3117 10391 3.254657 CGCATTGGTTTTTCCTGGAGTAA 59.745 43.478 0.00 0.00 37.07 2.24
3118 10392 2.817258 CGCATTGGTTTTTCCTGGAGTA 59.183 45.455 0.00 0.00 37.07 2.59
3119 10393 1.613437 CGCATTGGTTTTTCCTGGAGT 59.387 47.619 0.00 0.00 37.07 3.85
3120 10394 1.885887 TCGCATTGGTTTTTCCTGGAG 59.114 47.619 0.00 0.00 37.07 3.86
3121 10395 1.988293 TCGCATTGGTTTTTCCTGGA 58.012 45.000 0.00 0.00 37.07 3.86
3122 10396 2.676076 CTTCGCATTGGTTTTTCCTGG 58.324 47.619 0.00 0.00 37.07 4.45
3123 10397 2.061028 GCTTCGCATTGGTTTTTCCTG 58.939 47.619 0.00 0.00 37.07 3.86
3124 10398 1.335872 CGCTTCGCATTGGTTTTTCCT 60.336 47.619 0.00 0.00 37.07 3.36
3125 10399 1.059942 CGCTTCGCATTGGTTTTTCC 58.940 50.000 0.00 0.00 0.00 3.13
3138 10412 1.586564 CCTAGGTTCTCGCGCTTCG 60.587 63.158 5.56 0.00 40.15 3.79
3139 10413 1.878975 GCCTAGGTTCTCGCGCTTC 60.879 63.158 11.31 0.00 0.00 3.86
3140 10414 2.167398 TTGCCTAGGTTCTCGCGCTT 62.167 55.000 11.31 0.00 0.00 4.68
3141 10415 2.167398 TTTGCCTAGGTTCTCGCGCT 62.167 55.000 11.31 0.00 0.00 5.92
3142 10416 1.740296 TTTGCCTAGGTTCTCGCGC 60.740 57.895 11.31 0.00 0.00 6.86
3143 10417 1.359459 GGTTTGCCTAGGTTCTCGCG 61.359 60.000 11.31 0.00 0.00 5.87
3144 10418 1.359459 CGGTTTGCCTAGGTTCTCGC 61.359 60.000 11.31 0.00 0.00 5.03
3145 10419 1.359459 GCGGTTTGCCTAGGTTCTCG 61.359 60.000 11.31 9.59 37.76 4.04
3146 10420 2.467962 GCGGTTTGCCTAGGTTCTC 58.532 57.895 11.31 0.00 37.76 2.87
3147 10421 4.716003 GCGGTTTGCCTAGGTTCT 57.284 55.556 11.31 0.00 37.76 3.01
3156 10430 4.506288 AGTTGTTTCATTTAAGCGGTTTGC 59.494 37.500 4.64 0.00 46.98 3.68
3157 10431 6.582437 AAGTTGTTTCATTTAAGCGGTTTG 57.418 33.333 4.64 0.00 0.00 2.93
3158 10432 7.223193 GGTTAAGTTGTTTCATTTAAGCGGTTT 59.777 33.333 4.64 0.00 0.00 3.27
3159 10433 6.698329 GGTTAAGTTGTTTCATTTAAGCGGTT 59.302 34.615 4.76 4.76 0.00 4.44
3160 10434 6.183360 TGGTTAAGTTGTTTCATTTAAGCGGT 60.183 34.615 0.00 0.00 36.69 5.68
3161 10435 6.210078 TGGTTAAGTTGTTTCATTTAAGCGG 58.790 36.000 0.00 0.00 36.69 5.52
3162 10436 7.687005 TTGGTTAAGTTGTTTCATTTAAGCG 57.313 32.000 0.00 0.00 36.69 4.68
3163 10437 8.009409 GCATTGGTTAAGTTGTTTCATTTAAGC 58.991 33.333 0.00 0.00 35.30 3.09
3164 10438 9.039870 TGCATTGGTTAAGTTGTTTCATTTAAG 57.960 29.630 0.00 0.00 0.00 1.85
3165 10439 8.948631 TGCATTGGTTAAGTTGTTTCATTTAA 57.051 26.923 0.00 0.00 0.00 1.52
3166 10440 9.553064 AATGCATTGGTTAAGTTGTTTCATTTA 57.447 25.926 12.09 0.00 0.00 1.40
3167 10441 8.449251 AATGCATTGGTTAAGTTGTTTCATTT 57.551 26.923 12.09 0.00 0.00 2.32
3168 10442 9.553064 TTAATGCATTGGTTAAGTTGTTTCATT 57.447 25.926 22.27 0.00 0.00 2.57
3169 10443 9.553064 TTTAATGCATTGGTTAAGTTGTTTCAT 57.447 25.926 22.27 0.00 0.00 2.57
3170 10444 8.948631 TTTAATGCATTGGTTAAGTTGTTTCA 57.051 26.923 22.27 0.00 0.00 2.69
3171 10445 9.255304 TCTTTAATGCATTGGTTAAGTTGTTTC 57.745 29.630 22.27 0.00 0.00 2.78
3172 10446 9.040939 GTCTTTAATGCATTGGTTAAGTTGTTT 57.959 29.630 22.27 0.00 0.00 2.83
3173 10447 8.421002 AGTCTTTAATGCATTGGTTAAGTTGTT 58.579 29.630 22.27 0.00 0.00 2.83
3174 10448 7.951591 AGTCTTTAATGCATTGGTTAAGTTGT 58.048 30.769 22.27 6.64 0.00 3.32
3175 10449 8.816640 AAGTCTTTAATGCATTGGTTAAGTTG 57.183 30.769 22.27 3.36 0.00 3.16
3178 10452 9.573133 CCTAAAGTCTTTAATGCATTGGTTAAG 57.427 33.333 22.27 17.31 0.00 1.85
3179 10453 9.084533 ACCTAAAGTCTTTAATGCATTGGTTAA 57.915 29.630 22.27 5.20 0.00 2.01
3180 10454 8.519526 CACCTAAAGTCTTTAATGCATTGGTTA 58.480 33.333 22.27 0.00 0.00 2.85
3181 10455 7.378181 CACCTAAAGTCTTTAATGCATTGGTT 58.622 34.615 22.27 0.00 0.00 3.67
3182 10456 6.572314 GCACCTAAAGTCTTTAATGCATTGGT 60.572 38.462 22.27 12.86 37.30 3.67
3183 10457 5.807011 GCACCTAAAGTCTTTAATGCATTGG 59.193 40.000 22.27 12.22 37.30 3.16
3184 10458 6.624423 AGCACCTAAAGTCTTTAATGCATTG 58.376 36.000 27.27 5.54 38.66 2.82
3185 10459 6.840780 AGCACCTAAAGTCTTTAATGCATT 57.159 33.333 27.27 17.56 38.66 3.56
3186 10460 7.067494 CCTTAGCACCTAAAGTCTTTAATGCAT 59.933 37.037 27.27 19.57 38.66 3.96
3187 10461 6.374333 CCTTAGCACCTAAAGTCTTTAATGCA 59.626 38.462 27.27 17.61 38.66 3.96
3188 10462 6.678164 GCCTTAGCACCTAAAGTCTTTAATGC 60.678 42.308 22.49 22.49 37.47 3.56
3189 10463 6.599638 AGCCTTAGCACCTAAAGTCTTTAATG 59.400 38.462 6.51 8.63 43.56 1.90
3190 10464 6.599638 CAGCCTTAGCACCTAAAGTCTTTAAT 59.400 38.462 6.51 0.00 43.56 1.40
3191 10465 5.938125 CAGCCTTAGCACCTAAAGTCTTTAA 59.062 40.000 6.51 0.00 43.56 1.52
3192 10466 5.012768 ACAGCCTTAGCACCTAAAGTCTTTA 59.987 40.000 4.97 4.97 43.56 1.85
3193 10467 4.202472 ACAGCCTTAGCACCTAAAGTCTTT 60.202 41.667 2.81 2.81 43.56 2.52
3194 10468 3.328050 ACAGCCTTAGCACCTAAAGTCTT 59.672 43.478 0.00 0.00 43.56 3.01
3195 10469 2.907042 ACAGCCTTAGCACCTAAAGTCT 59.093 45.455 0.00 0.00 43.56 3.24
3196 10470 3.003480 CACAGCCTTAGCACCTAAAGTC 58.997 50.000 0.00 0.00 43.56 3.01
3197 10471 2.372172 ACACAGCCTTAGCACCTAAAGT 59.628 45.455 0.00 0.00 43.56 2.66
3198 10472 3.059352 ACACAGCCTTAGCACCTAAAG 57.941 47.619 0.00 0.00 43.56 1.85
3199 10473 3.502123 AACACAGCCTTAGCACCTAAA 57.498 42.857 0.00 0.00 43.56 1.85
3200 10474 3.146066 CAAACACAGCCTTAGCACCTAA 58.854 45.455 0.00 0.00 43.56 2.69
3201 10475 2.552155 CCAAACACAGCCTTAGCACCTA 60.552 50.000 0.00 0.00 43.56 3.08
3202 10476 1.609208 CAAACACAGCCTTAGCACCT 58.391 50.000 0.00 0.00 43.56 4.00
3203 10477 0.598065 CCAAACACAGCCTTAGCACC 59.402 55.000 0.00 0.00 43.56 5.01
3204 10478 1.318576 ACCAAACACAGCCTTAGCAC 58.681 50.000 0.00 0.00 43.56 4.40
3205 10479 1.680735 CAACCAAACACAGCCTTAGCA 59.319 47.619 0.00 0.00 43.56 3.49
3206 10480 1.953686 TCAACCAAACACAGCCTTAGC 59.046 47.619 0.00 0.00 40.32 3.09
3207 10481 2.030805 GCTCAACCAAACACAGCCTTAG 60.031 50.000 0.00 0.00 0.00 2.18
3208 10482 1.953686 GCTCAACCAAACACAGCCTTA 59.046 47.619 0.00 0.00 0.00 2.69
3209 10483 0.746659 GCTCAACCAAACACAGCCTT 59.253 50.000 0.00 0.00 0.00 4.35
3210 10484 0.106519 AGCTCAACCAAACACAGCCT 60.107 50.000 0.00 0.00 0.00 4.58
3211 10485 0.031178 CAGCTCAACCAAACACAGCC 59.969 55.000 0.00 0.00 0.00 4.85
3212 10486 0.595825 GCAGCTCAACCAAACACAGC 60.596 55.000 0.00 0.00 0.00 4.40
3213 10487 0.740149 TGCAGCTCAACCAAACACAG 59.260 50.000 0.00 0.00 0.00 3.66
3214 10488 0.740149 CTGCAGCTCAACCAAACACA 59.260 50.000 0.00 0.00 0.00 3.72
3215 10489 1.024271 TCTGCAGCTCAACCAAACAC 58.976 50.000 9.47 0.00 0.00 3.32
3216 10490 1.985473 ATCTGCAGCTCAACCAAACA 58.015 45.000 9.47 0.00 0.00 2.83
3217 10491 2.555757 AGAATCTGCAGCTCAACCAAAC 59.444 45.455 9.47 0.00 0.00 2.93
3218 10492 2.867624 AGAATCTGCAGCTCAACCAAA 58.132 42.857 9.47 0.00 0.00 3.28
3219 10493 2.574006 AGAATCTGCAGCTCAACCAA 57.426 45.000 9.47 0.00 0.00 3.67
3220 10494 2.302733 TGTAGAATCTGCAGCTCAACCA 59.697 45.455 9.47 3.76 0.00 3.67
3221 10495 2.977914 TGTAGAATCTGCAGCTCAACC 58.022 47.619 9.47 1.31 0.00 3.77
3222 10496 5.362556 TTTTGTAGAATCTGCAGCTCAAC 57.637 39.130 9.47 4.06 0.00 3.18
3223 10497 4.083110 GCTTTTGTAGAATCTGCAGCTCAA 60.083 41.667 9.47 5.08 0.00 3.02
3224 10498 3.438087 GCTTTTGTAGAATCTGCAGCTCA 59.562 43.478 9.47 0.00 0.00 4.26
3225 10499 3.688673 AGCTTTTGTAGAATCTGCAGCTC 59.311 43.478 9.47 8.21 0.00 4.09
3226 10500 3.439476 CAGCTTTTGTAGAATCTGCAGCT 59.561 43.478 9.47 7.54 28.84 4.24
3227 10501 3.756069 CAGCTTTTGTAGAATCTGCAGC 58.244 45.455 9.47 2.30 0.00 5.25
3228 10502 3.439476 AGCAGCTTTTGTAGAATCTGCAG 59.561 43.478 7.63 7.63 46.55 4.41
3229 10503 3.189910 CAGCAGCTTTTGTAGAATCTGCA 59.810 43.478 17.78 0.00 46.55 4.41
3230 10504 3.756069 CAGCAGCTTTTGTAGAATCTGC 58.244 45.455 11.52 11.52 45.05 4.26
3231 10505 3.727079 CGCAGCAGCTTTTGTAGAATCTG 60.727 47.826 0.00 0.00 39.10 2.90
3232 10506 2.417933 CGCAGCAGCTTTTGTAGAATCT 59.582 45.455 0.00 0.00 39.10 2.40
3233 10507 2.476854 CCGCAGCAGCTTTTGTAGAATC 60.477 50.000 0.00 0.00 39.10 2.52
3234 10508 1.470098 CCGCAGCAGCTTTTGTAGAAT 59.530 47.619 0.00 0.00 39.10 2.40
3235 10509 0.874390 CCGCAGCAGCTTTTGTAGAA 59.126 50.000 0.00 0.00 39.10 2.10
3236 10510 0.034756 TCCGCAGCAGCTTTTGTAGA 59.965 50.000 0.00 0.00 39.10 2.59
3237 10511 0.874390 TTCCGCAGCAGCTTTTGTAG 59.126 50.000 0.00 0.00 39.10 2.74
3238 10512 1.313772 TTTCCGCAGCAGCTTTTGTA 58.686 45.000 0.00 0.00 39.10 2.41
3239 10513 0.459489 TTTTCCGCAGCAGCTTTTGT 59.541 45.000 0.00 0.00 39.10 2.83
3240 10514 1.134226 CTTTTCCGCAGCAGCTTTTG 58.866 50.000 0.00 0.00 39.10 2.44
3241 10515 0.598419 GCTTTTCCGCAGCAGCTTTT 60.598 50.000 0.00 0.00 39.10 2.27
3242 10516 1.006922 GCTTTTCCGCAGCAGCTTT 60.007 52.632 0.00 0.00 39.10 3.51
3243 10517 1.900498 AGCTTTTCCGCAGCAGCTT 60.900 52.632 0.00 0.00 39.99 3.74
3244 10518 2.282040 AGCTTTTCCGCAGCAGCT 60.282 55.556 0.00 0.00 39.99 4.24
3245 10519 2.126580 CAGCTTTTCCGCAGCAGC 60.127 61.111 0.00 0.00 39.99 5.25
3246 10520 2.126580 GCAGCTTTTCCGCAGCAG 60.127 61.111 0.00 0.00 41.41 4.24
3247 10521 2.595463 AGCAGCTTTTCCGCAGCA 60.595 55.556 0.00 0.00 43.81 4.41
3248 10522 2.126580 CAGCAGCTTTTCCGCAGC 60.127 61.111 0.00 0.00 41.99 5.25
3249 10523 1.081641 CACAGCAGCTTTTCCGCAG 60.082 57.895 0.00 0.00 0.00 5.18
3250 10524 2.554636 CCACAGCAGCTTTTCCGCA 61.555 57.895 0.00 0.00 0.00 5.69
3251 10525 1.795170 TTCCACAGCAGCTTTTCCGC 61.795 55.000 0.00 0.00 0.00 5.54
3252 10526 0.667993 TTTCCACAGCAGCTTTTCCG 59.332 50.000 0.00 0.00 0.00 4.30
3253 10527 2.747436 CTTTTCCACAGCAGCTTTTCC 58.253 47.619 0.00 0.00 0.00 3.13
3254 10528 2.130395 GCTTTTCCACAGCAGCTTTTC 58.870 47.619 0.00 0.00 37.22 2.29
3255 10529 1.758862 AGCTTTTCCACAGCAGCTTTT 59.241 42.857 0.00 0.00 39.69 2.27
3256 10530 1.068127 CAGCTTTTCCACAGCAGCTTT 59.932 47.619 0.00 0.00 40.75 3.51
3257 10531 0.672342 CAGCTTTTCCACAGCAGCTT 59.328 50.000 0.00 0.00 40.75 3.74
3258 10532 0.466922 ACAGCTTTTCCACAGCAGCT 60.467 50.000 0.00 0.00 43.59 4.24
3259 10533 0.386838 AACAGCTTTTCCACAGCAGC 59.613 50.000 0.00 0.00 39.99 5.25
3260 10534 1.406539 ACAACAGCTTTTCCACAGCAG 59.593 47.619 0.00 0.00 39.99 4.24
3261 10535 1.134753 CACAACAGCTTTTCCACAGCA 59.865 47.619 0.00 0.00 39.99 4.41
3262 10536 1.405105 TCACAACAGCTTTTCCACAGC 59.595 47.619 0.00 0.00 37.56 4.40
3263 10537 3.781079 TTCACAACAGCTTTTCCACAG 57.219 42.857 0.00 0.00 0.00 3.66
3264 10538 4.527509 TTTTCACAACAGCTTTTCCACA 57.472 36.364 0.00 0.00 0.00 4.17
3265 10539 4.260334 GCATTTTCACAACAGCTTTTCCAC 60.260 41.667 0.00 0.00 0.00 4.02
3266 10540 3.870419 GCATTTTCACAACAGCTTTTCCA 59.130 39.130 0.00 0.00 0.00 3.53
3267 10541 4.025480 CAGCATTTTCACAACAGCTTTTCC 60.025 41.667 0.00 0.00 0.00 3.13
3268 10542 4.551410 GCAGCATTTTCACAACAGCTTTTC 60.551 41.667 0.00 0.00 0.00 2.29
3269 10543 3.310501 GCAGCATTTTCACAACAGCTTTT 59.689 39.130 0.00 0.00 0.00 2.27
3270 10544 2.867975 GCAGCATTTTCACAACAGCTTT 59.132 40.909 0.00 0.00 0.00 3.51
3271 10545 2.101917 AGCAGCATTTTCACAACAGCTT 59.898 40.909 0.00 0.00 0.00 3.74
3272 10546 1.684983 AGCAGCATTTTCACAACAGCT 59.315 42.857 0.00 0.00 0.00 4.24
3273 10547 1.790623 CAGCAGCATTTTCACAACAGC 59.209 47.619 0.00 0.00 0.00 4.40
3274 10548 2.792674 CACAGCAGCATTTTCACAACAG 59.207 45.455 0.00 0.00 0.00 3.16
3275 10549 2.481622 CCACAGCAGCATTTTCACAACA 60.482 45.455 0.00 0.00 0.00 3.33
3276 10550 2.129607 CCACAGCAGCATTTTCACAAC 58.870 47.619 0.00 0.00 0.00 3.32
3277 10551 2.030371 TCCACAGCAGCATTTTCACAA 58.970 42.857 0.00 0.00 0.00 3.33
3278 10552 1.689984 TCCACAGCAGCATTTTCACA 58.310 45.000 0.00 0.00 0.00 3.58
3279 10553 2.798976 TTCCACAGCAGCATTTTCAC 57.201 45.000 0.00 0.00 0.00 3.18
3280 10554 3.719924 CTTTTCCACAGCAGCATTTTCA 58.280 40.909 0.00 0.00 0.00 2.69
3281 10555 2.477754 GCTTTTCCACAGCAGCATTTTC 59.522 45.455 0.00 0.00 37.22 2.29
3282 10556 2.103601 AGCTTTTCCACAGCAGCATTTT 59.896 40.909 0.00 0.00 39.99 1.82
3283 10557 1.690352 AGCTTTTCCACAGCAGCATTT 59.310 42.857 0.00 0.00 39.99 2.32
3284 10558 1.000506 CAGCTTTTCCACAGCAGCATT 59.999 47.619 0.00 0.00 39.99 3.56
3285 10559 0.601558 CAGCTTTTCCACAGCAGCAT 59.398 50.000 0.00 0.00 39.99 3.79
3286 10560 1.457823 CCAGCTTTTCCACAGCAGCA 61.458 55.000 0.00 0.00 39.99 4.41
3287 10561 1.174712 TCCAGCTTTTCCACAGCAGC 61.175 55.000 0.00 0.00 39.99 5.25
3288 10562 1.268899 CTTCCAGCTTTTCCACAGCAG 59.731 52.381 0.00 0.00 39.99 4.24
3289 10563 1.321474 CTTCCAGCTTTTCCACAGCA 58.679 50.000 0.00 0.00 39.99 4.41
3290 10564 0.038801 GCTTCCAGCTTTTCCACAGC 60.039 55.000 0.00 0.00 38.45 4.40
3301 10575 3.726291 TTTAACCAAACAGCTTCCAGC 57.274 42.857 0.00 0.00 42.84 4.85
3302 10576 4.041723 CGTTTTAACCAAACAGCTTCCAG 58.958 43.478 0.00 0.00 44.63 3.86
3303 10577 3.695060 TCGTTTTAACCAAACAGCTTCCA 59.305 39.130 0.00 0.00 44.63 3.53
3304 10578 4.039703 GTCGTTTTAACCAAACAGCTTCC 58.960 43.478 0.00 0.00 44.63 3.46
3305 10579 4.733405 CAGTCGTTTTAACCAAACAGCTTC 59.267 41.667 0.00 0.00 44.63 3.86
3306 10580 4.157105 ACAGTCGTTTTAACCAAACAGCTT 59.843 37.500 0.00 0.00 44.63 3.74
3307 10581 3.692593 ACAGTCGTTTTAACCAAACAGCT 59.307 39.130 0.00 0.00 44.63 4.24
3308 10582 3.789224 CACAGTCGTTTTAACCAAACAGC 59.211 43.478 0.00 0.00 44.63 4.40
3309 10583 5.224562 TCACAGTCGTTTTAACCAAACAG 57.775 39.130 0.00 0.00 44.63 3.16
3310 10584 5.624344 TTCACAGTCGTTTTAACCAAACA 57.376 34.783 0.00 0.00 44.63 2.83
3311 10585 6.033091 CAGTTTCACAGTCGTTTTAACCAAAC 59.967 38.462 0.00 0.00 41.42 2.93
3312 10586 6.087522 CAGTTTCACAGTCGTTTTAACCAAA 58.912 36.000 0.00 0.00 0.00 3.28
3313 10587 5.181622 ACAGTTTCACAGTCGTTTTAACCAA 59.818 36.000 0.00 0.00 0.00 3.67
3314 10588 4.696402 ACAGTTTCACAGTCGTTTTAACCA 59.304 37.500 0.00 0.00 0.00 3.67
3315 10589 5.225899 ACAGTTTCACAGTCGTTTTAACC 57.774 39.130 0.00 0.00 0.00 2.85
3316 10590 7.225523 TCTACAGTTTCACAGTCGTTTTAAC 57.774 36.000 0.00 0.00 0.00 2.01
3317 10591 8.428186 AATCTACAGTTTCACAGTCGTTTTAA 57.572 30.769 0.00 0.00 0.00 1.52
3318 10592 8.332464 CAAATCTACAGTTTCACAGTCGTTTTA 58.668 33.333 0.00 0.00 0.00 1.52
3319 10593 6.920569 AATCTACAGTTTCACAGTCGTTTT 57.079 33.333 0.00 0.00 0.00 2.43
3320 10594 6.238374 CCAAATCTACAGTTTCACAGTCGTTT 60.238 38.462 0.00 0.00 0.00 3.60
3321 10595 5.236478 CCAAATCTACAGTTTCACAGTCGTT 59.764 40.000 0.00 0.00 0.00 3.85
3322 10596 4.750098 CCAAATCTACAGTTTCACAGTCGT 59.250 41.667 0.00 0.00 0.00 4.34
3323 10597 4.377431 GCCAAATCTACAGTTTCACAGTCG 60.377 45.833 0.00 0.00 0.00 4.18
3324 10598 4.757149 AGCCAAATCTACAGTTTCACAGTC 59.243 41.667 0.00 0.00 0.00 3.51
3325 10599 4.718961 AGCCAAATCTACAGTTTCACAGT 58.281 39.130 0.00 0.00 0.00 3.55
3326 10600 4.756642 TGAGCCAAATCTACAGTTTCACAG 59.243 41.667 0.00 0.00 0.00 3.66
3327 10601 4.713553 TGAGCCAAATCTACAGTTTCACA 58.286 39.130 0.00 0.00 0.00 3.58
3328 10602 5.689383 TTGAGCCAAATCTACAGTTTCAC 57.311 39.130 0.00 0.00 0.00 3.18
3329 10603 6.899393 ATTTGAGCCAAATCTACAGTTTCA 57.101 33.333 7.18 0.00 39.50 2.69
3330 10604 8.593492 AAAATTTGAGCCAAATCTACAGTTTC 57.407 30.769 11.87 0.00 42.32 2.78
3331 10605 7.657354 GGAAAATTTGAGCCAAATCTACAGTTT 59.343 33.333 11.87 8.56 42.32 2.66
3332 10606 7.154656 GGAAAATTTGAGCCAAATCTACAGTT 58.845 34.615 11.87 2.14 42.32 3.16
3333 10607 6.570378 CGGAAAATTTGAGCCAAATCTACAGT 60.570 38.462 11.87 0.00 42.32 3.55
3334 10608 5.801947 CGGAAAATTTGAGCCAAATCTACAG 59.198 40.000 11.87 5.68 42.32 2.74
3335 10609 5.242838 ACGGAAAATTTGAGCCAAATCTACA 59.757 36.000 11.87 0.00 42.32 2.74
3336 10610 5.709966 ACGGAAAATTTGAGCCAAATCTAC 58.290 37.500 11.87 4.99 42.32 2.59
3337 10611 5.975693 ACGGAAAATTTGAGCCAAATCTA 57.024 34.783 11.87 0.00 42.32 1.98
3338 10612 4.871933 ACGGAAAATTTGAGCCAAATCT 57.128 36.364 11.87 4.94 42.32 2.40
3339 10613 6.455513 GCATTACGGAAAATTTGAGCCAAATC 60.456 38.462 11.87 3.55 42.32 2.17
3340 10614 5.351189 GCATTACGGAAAATTTGAGCCAAAT 59.649 36.000 7.18 7.18 44.62 2.32
3341 10615 4.688413 GCATTACGGAAAATTTGAGCCAAA 59.312 37.500 0.00 3.33 37.75 3.28
3342 10616 4.241681 GCATTACGGAAAATTTGAGCCAA 58.758 39.130 0.00 0.00 0.00 4.52
3343 10617 3.367910 GGCATTACGGAAAATTTGAGCCA 60.368 43.478 0.00 0.00 38.27 4.75
3344 10618 3.186909 GGCATTACGGAAAATTTGAGCC 58.813 45.455 0.00 0.00 0.00 4.70
3345 10619 3.186909 GGGCATTACGGAAAATTTGAGC 58.813 45.455 0.00 0.00 0.00 4.26
3346 10620 3.447229 AGGGGCATTACGGAAAATTTGAG 59.553 43.478 0.00 0.00 0.00 3.02
3347 10621 3.436243 AGGGGCATTACGGAAAATTTGA 58.564 40.909 0.00 0.00 0.00 2.69
3348 10622 3.885724 AGGGGCATTACGGAAAATTTG 57.114 42.857 0.00 0.00 0.00 2.32
3349 10623 3.958147 CCTAGGGGCATTACGGAAAATTT 59.042 43.478 0.00 0.00 0.00 1.82
3350 10624 3.203487 TCCTAGGGGCATTACGGAAAATT 59.797 43.478 9.46 0.00 0.00 1.82
3351 10625 2.781174 TCCTAGGGGCATTACGGAAAAT 59.219 45.455 9.46 0.00 0.00 1.82
3352 10626 2.092807 GTCCTAGGGGCATTACGGAAAA 60.093 50.000 9.46 0.00 0.00 2.29
3353 10627 1.487558 GTCCTAGGGGCATTACGGAAA 59.512 52.381 9.46 0.00 0.00 3.13
3354 10628 1.125633 GTCCTAGGGGCATTACGGAA 58.874 55.000 9.46 0.00 0.00 4.30
3355 10629 0.761702 GGTCCTAGGGGCATTACGGA 60.762 60.000 9.46 0.00 0.00 4.69
3356 10630 0.763223 AGGTCCTAGGGGCATTACGG 60.763 60.000 9.46 0.00 0.00 4.02
3357 10631 0.393077 CAGGTCCTAGGGGCATTACG 59.607 60.000 9.46 0.00 0.00 3.18
3358 10632 1.694696 CTCAGGTCCTAGGGGCATTAC 59.305 57.143 9.46 0.00 0.00 1.89
3359 10633 1.294068 ACTCAGGTCCTAGGGGCATTA 59.706 52.381 9.46 0.00 0.00 1.90
3360 10634 0.044855 ACTCAGGTCCTAGGGGCATT 59.955 55.000 9.46 0.00 0.00 3.56
3361 10635 0.692419 CACTCAGGTCCTAGGGGCAT 60.692 60.000 9.46 0.00 0.00 4.40
3362 10636 1.306141 CACTCAGGTCCTAGGGGCA 60.306 63.158 9.46 0.00 0.00 5.36
3363 10637 0.617820 TTCACTCAGGTCCTAGGGGC 60.618 60.000 9.46 2.12 0.00 5.80
3364 10638 2.182516 ATTCACTCAGGTCCTAGGGG 57.817 55.000 9.46 0.00 0.00 4.79
3365 10639 4.227197 ACATATTCACTCAGGTCCTAGGG 58.773 47.826 9.46 0.00 0.00 3.53
3366 10640 5.878406 AACATATTCACTCAGGTCCTAGG 57.122 43.478 0.82 0.82 0.00 3.02
3369 10643 7.880195 GCATATAAACATATTCACTCAGGTCCT 59.120 37.037 0.00 0.00 0.00 3.85
3370 10644 7.880195 AGCATATAAACATATTCACTCAGGTCC 59.120 37.037 0.00 0.00 0.00 4.46
3371 10645 8.839310 AGCATATAAACATATTCACTCAGGTC 57.161 34.615 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.