Multiple sequence alignment - TraesCS1A01G389900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G389900 chr1A 100.000 3393 0 0 1 3393 557874472 557871080 0.000000e+00 6266
1 TraesCS1A01G389900 chr1D 90.879 2390 103 39 6 2324 465351802 465349457 0.000000e+00 3099
2 TraesCS1A01G389900 chr1B 90.109 2285 106 64 105 2324 642123951 642121722 0.000000e+00 2857
3 TraesCS1A01G389900 chr1B 85.185 216 19 3 1976 2191 40774006 40773804 3.430000e-50 209
4 TraesCS1A01G389900 chr6B 96.621 651 18 2 2743 3393 138698858 138699504 0.000000e+00 1077
5 TraesCS1A01G389900 chr6B 82.944 428 27 19 2365 2753 138686910 138687330 9.010000e-91 344
6 TraesCS1A01G389900 chr6B 83.425 181 10 9 3232 3393 138698984 138699163 2.110000e-32 150
7 TraesCS1A01G389900 chr4B 90.421 261 23 2 1526 1785 429345171 429344912 3.240000e-90 342
8 TraesCS1A01G389900 chr4B 90.071 141 11 1 981 1121 429345345 429345208 2.690000e-41 180
9 TraesCS1A01G389900 chr6D 80.053 376 45 17 1230 1599 460161834 460161483 5.620000e-63 252
10 TraesCS1A01G389900 chr2A 93.382 136 6 2 2044 2179 348213862 348213994 7.430000e-47 198
11 TraesCS1A01G389900 chr2A 93.333 75 4 1 1927 2000 348213791 348213865 3.580000e-20 110
12 TraesCS1A01G389900 chr2B 81.818 165 24 4 1434 1598 775136865 775136707 2.120000e-27 134
13 TraesCS1A01G389900 chr3A 86.400 125 12 5 3076 3200 80421681 80421562 7.640000e-27 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G389900 chr1A 557871080 557874472 3392 True 6266.0 6266 100.000 1 3393 1 chr1A.!!$R1 3392
1 TraesCS1A01G389900 chr1D 465349457 465351802 2345 True 3099.0 3099 90.879 6 2324 1 chr1D.!!$R1 2318
2 TraesCS1A01G389900 chr1B 642121722 642123951 2229 True 2857.0 2857 90.109 105 2324 1 chr1B.!!$R2 2219
3 TraesCS1A01G389900 chr6B 138698858 138699504 646 False 613.5 1077 90.023 2743 3393 2 chr6B.!!$F2 650

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
286 295 0.106719 ACCAAGTCACCAACCACCAG 60.107 55.0 0.00 0.0 0.00 4.00 F
1654 1729 1.164041 AACTTCAAAGACGGTGCCGG 61.164 55.0 15.44 0.0 44.69 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2206 2297 0.105453 AGTGGAGTGGAGTGGAGTGT 60.105 55.0 0.0 0.0 0.0 3.55 R
2640 2748 0.035458 AGGGACGCAGAGAAGTTTGG 59.965 55.0 0.0 0.0 0.0 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 5.957771 AGTCCTTAAATCTGCTACATCCA 57.042 39.130 0.00 0.00 0.00 3.41
49 50 6.939163 GTCCTTAAATCTGCTACATCCATGAT 59.061 38.462 0.00 0.00 0.00 2.45
50 51 7.118971 GTCCTTAAATCTGCTACATCCATGATC 59.881 40.741 0.00 0.00 0.00 2.92
53 54 4.822685 ATCTGCTACATCCATGATCTCC 57.177 45.455 0.00 0.00 0.00 3.71
59 60 2.496297 ACATCCATGATCTCCCCTTGT 58.504 47.619 0.00 0.00 0.00 3.16
66 67 3.893753 TGATCTCCCCTTGTGGAAAAA 57.106 42.857 0.00 0.00 35.39 1.94
75 76 4.279420 CCCCTTGTGGAAAAAGAAGAGAAG 59.721 45.833 0.00 0.00 30.71 2.85
130 131 0.539051 AGGCTGGGAAATCTGACTCG 59.461 55.000 0.00 0.00 0.00 4.18
164 165 2.758009 GTTGATTGGCTTGCACACAAT 58.242 42.857 8.86 8.86 37.52 2.71
210 211 2.225467 GCCTCCTCCAATAATGCAGAC 58.775 52.381 0.00 0.00 0.00 3.51
212 213 2.173356 CCTCCTCCAATAATGCAGACCA 59.827 50.000 0.00 0.00 0.00 4.02
243 244 0.392193 CACATCCACTGAGGCAGTCC 60.392 60.000 0.00 0.00 43.43 3.85
257 266 1.000993 AGTCCGCCAGTCATCCTCT 59.999 57.895 0.00 0.00 0.00 3.69
259 268 1.758514 TCCGCCAGTCATCCTCTCC 60.759 63.158 0.00 0.00 0.00 3.71
286 295 0.106719 ACCAAGTCACCAACCACCAG 60.107 55.000 0.00 0.00 0.00 4.00
290 299 2.203337 TCACCAACCACCAGCAGC 60.203 61.111 0.00 0.00 0.00 5.25
291 300 3.663176 CACCAACCACCAGCAGCG 61.663 66.667 0.00 0.00 0.00 5.18
316 325 1.676635 GCAGCAGTGCCAGGAATGA 60.677 57.895 12.58 0.00 44.72 2.57
359 368 4.065281 GCCGGCCACGTACTCACT 62.065 66.667 18.11 0.00 38.78 3.41
426 436 2.288643 AGGATCCCCCTCTGCTCC 59.711 66.667 8.55 0.00 43.31 4.70
427 437 2.851588 GGATCCCCCTCTGCTCCC 60.852 72.222 0.00 0.00 0.00 4.30
905 969 3.591835 CCGCGCTCTCCTCTCCTC 61.592 72.222 5.56 0.00 0.00 3.71
906 970 2.515991 CGCGCTCTCCTCTCCTCT 60.516 66.667 5.56 0.00 0.00 3.69
909 973 2.489275 CGCTCTCCTCTCCTCTGCC 61.489 68.421 0.00 0.00 0.00 4.85
984 1050 3.494736 TAACAACCCACCCCGCACC 62.495 63.158 0.00 0.00 0.00 5.01
1034 1100 1.922135 CTGGCATTTACGTGGCGCTT 61.922 55.000 7.64 0.00 46.68 4.68
1141 1213 4.097361 GGGGAGTGGGGACGAAGC 62.097 72.222 0.00 0.00 0.00 3.86
1266 1338 4.678743 GGTGGGGTGAAGGGTGGC 62.679 72.222 0.00 0.00 0.00 5.01
1410 1485 3.047877 GCTAACGGCAGCAACGGT 61.048 61.111 5.71 0.00 41.40 4.83
1632 1707 3.866582 CGGGAGATGGAGGCCACC 61.867 72.222 13.09 13.09 35.80 4.61
1654 1729 1.164041 AACTTCAAAGACGGTGCCGG 61.164 55.000 15.44 0.00 44.69 6.13
2173 2248 3.074369 TCGGCGGCTCCTGATGAA 61.074 61.111 7.21 0.00 0.00 2.57
2226 2317 0.319728 CACTCCACTCCACTCCACTG 59.680 60.000 0.00 0.00 0.00 3.66
2227 2318 0.833834 ACTCCACTCCACTCCACTGG 60.834 60.000 0.00 0.00 0.00 4.00
2253 2349 1.334243 AGCTCGAGTAGAATGGTACGC 59.666 52.381 15.13 0.00 0.00 4.42
2296 2400 4.766970 GGGACGGCTGATGATCAG 57.233 61.111 17.83 17.83 46.90 2.90
2324 2432 1.771255 ACTGGATCTGATTAGGTGGCC 59.229 52.381 0.00 0.00 0.00 5.36
2325 2433 1.770658 CTGGATCTGATTAGGTGGCCA 59.229 52.381 0.00 0.00 0.00 5.36
2326 2434 1.490490 TGGATCTGATTAGGTGGCCAC 59.510 52.381 28.57 28.57 0.00 5.01
2327 2435 1.771255 GGATCTGATTAGGTGGCCACT 59.229 52.381 33.91 21.96 0.00 4.00
2328 2436 2.486191 GGATCTGATTAGGTGGCCACTG 60.486 54.545 33.91 12.20 0.00 3.66
2329 2437 1.656587 TCTGATTAGGTGGCCACTGT 58.343 50.000 33.91 23.55 0.00 3.55
2330 2438 1.985159 TCTGATTAGGTGGCCACTGTT 59.015 47.619 33.91 21.68 0.00 3.16
2331 2439 2.086869 CTGATTAGGTGGCCACTGTTG 58.913 52.381 33.91 14.54 0.00 3.33
2332 2440 0.811281 GATTAGGTGGCCACTGTTGC 59.189 55.000 33.91 17.83 0.00 4.17
2333 2441 0.112218 ATTAGGTGGCCACTGTTGCA 59.888 50.000 33.91 13.60 0.00 4.08
2334 2442 0.106469 TTAGGTGGCCACTGTTGCAA 60.106 50.000 33.91 16.00 0.00 4.08
2335 2443 0.821711 TAGGTGGCCACTGTTGCAAC 60.822 55.000 33.91 22.83 31.60 4.17
2336 2444 2.422231 GGTGGCCACTGTTGCAACA 61.422 57.895 33.91 29.36 34.18 3.33
2344 2452 3.536164 TGTTGCAACAGCCTTGGG 58.464 55.556 27.96 0.00 34.30 4.12
2345 2453 1.381056 TGTTGCAACAGCCTTGGGT 60.381 52.632 27.96 0.00 34.30 4.51
2346 2454 1.067916 GTTGCAACAGCCTTGGGTG 59.932 57.895 24.52 16.25 0.00 4.61
2347 2455 1.076412 TTGCAACAGCCTTGGGTGA 60.076 52.632 23.45 0.13 0.00 4.02
2348 2456 0.469705 TTGCAACAGCCTTGGGTGAT 60.470 50.000 23.45 10.58 0.00 3.06
2349 2457 0.469705 TGCAACAGCCTTGGGTGATT 60.470 50.000 23.45 11.91 0.00 2.57
2350 2458 0.037975 GCAACAGCCTTGGGTGATTG 60.038 55.000 23.45 21.13 0.00 2.67
2351 2459 1.619654 CAACAGCCTTGGGTGATTGA 58.380 50.000 23.45 0.00 0.00 2.57
2352 2460 2.173519 CAACAGCCTTGGGTGATTGAT 58.826 47.619 23.45 0.00 0.00 2.57
2353 2461 2.564062 CAACAGCCTTGGGTGATTGATT 59.436 45.455 23.45 5.94 0.00 2.57
2354 2462 3.737559 ACAGCCTTGGGTGATTGATTA 57.262 42.857 23.45 0.00 0.00 1.75
2355 2463 3.356290 ACAGCCTTGGGTGATTGATTAC 58.644 45.455 23.45 0.00 0.00 1.89
2356 2464 3.245229 ACAGCCTTGGGTGATTGATTACA 60.245 43.478 23.45 0.00 0.00 2.41
2357 2465 3.956199 CAGCCTTGGGTGATTGATTACAT 59.044 43.478 13.02 0.00 0.00 2.29
2358 2466 4.403432 CAGCCTTGGGTGATTGATTACATT 59.597 41.667 13.02 0.00 0.00 2.71
2359 2467 5.593909 CAGCCTTGGGTGATTGATTACATTA 59.406 40.000 13.02 0.00 0.00 1.90
2360 2468 5.594317 AGCCTTGGGTGATTGATTACATTAC 59.406 40.000 0.00 0.00 0.00 1.89
2361 2469 5.359576 GCCTTGGGTGATTGATTACATTACA 59.640 40.000 0.00 0.00 0.00 2.41
2362 2470 6.040842 GCCTTGGGTGATTGATTACATTACAT 59.959 38.462 0.00 0.00 0.00 2.29
2363 2471 7.417797 GCCTTGGGTGATTGATTACATTACATT 60.418 37.037 0.00 0.00 0.00 2.71
2364 2472 9.130661 CCTTGGGTGATTGATTACATTACATTA 57.869 33.333 0.00 0.00 0.00 1.90
2365 2473 9.950680 CTTGGGTGATTGATTACATTACATTAC 57.049 33.333 0.00 0.00 0.00 1.89
2366 2474 9.467796 TTGGGTGATTGATTACATTACATTACA 57.532 29.630 0.00 0.00 0.00 2.41
2367 2475 9.639563 TGGGTGATTGATTACATTACATTACAT 57.360 29.630 0.00 0.00 0.00 2.29
2390 2498 9.386122 ACATTAGATAATAGAGGGATTGTCTGT 57.614 33.333 5.86 0.00 37.69 3.41
2396 2504 9.832445 GATAATAGAGGGATTGTCTGTTTTACA 57.168 33.333 0.00 0.00 29.28 2.41
2398 2506 8.738645 AATAGAGGGATTGTCTGTTTTACATC 57.261 34.615 0.00 0.00 0.00 3.06
2399 2507 5.501156 AGAGGGATTGTCTGTTTTACATCC 58.499 41.667 0.00 0.00 0.00 3.51
2400 2508 4.261801 AGGGATTGTCTGTTTTACATCCG 58.738 43.478 0.00 0.00 31.11 4.18
2401 2509 4.019681 AGGGATTGTCTGTTTTACATCCGA 60.020 41.667 0.00 0.00 31.11 4.55
2402 2510 4.094442 GGGATTGTCTGTTTTACATCCGAC 59.906 45.833 0.00 0.00 31.11 4.79
2403 2511 4.935808 GGATTGTCTGTTTTACATCCGACT 59.064 41.667 0.00 0.00 0.00 4.18
2404 2512 5.163854 GGATTGTCTGTTTTACATCCGACTG 60.164 44.000 0.00 0.00 0.00 3.51
2405 2513 4.594123 TGTCTGTTTTACATCCGACTGA 57.406 40.909 0.00 0.00 0.00 3.41
2406 2514 4.951254 TGTCTGTTTTACATCCGACTGAA 58.049 39.130 0.00 0.00 0.00 3.02
2407 2515 5.361427 TGTCTGTTTTACATCCGACTGAAA 58.639 37.500 0.00 0.00 0.00 2.69
2408 2516 5.995282 TGTCTGTTTTACATCCGACTGAAAT 59.005 36.000 0.00 0.00 0.00 2.17
2409 2517 6.147164 TGTCTGTTTTACATCCGACTGAAATC 59.853 38.462 0.00 0.00 0.00 2.17
2410 2518 5.642063 TCTGTTTTACATCCGACTGAAATCC 59.358 40.000 0.00 0.00 0.00 3.01
2411 2519 5.309638 TGTTTTACATCCGACTGAAATCCA 58.690 37.500 0.00 0.00 0.00 3.41
2412 2520 5.765677 TGTTTTACATCCGACTGAAATCCAA 59.234 36.000 0.00 0.00 0.00 3.53
2413 2521 6.432783 TGTTTTACATCCGACTGAAATCCAAT 59.567 34.615 0.00 0.00 0.00 3.16
2414 2522 7.040062 TGTTTTACATCCGACTGAAATCCAATT 60.040 33.333 0.00 0.00 0.00 2.32
2415 2523 6.677781 TTACATCCGACTGAAATCCAATTC 57.322 37.500 0.00 0.00 0.00 2.17
2416 2524 3.947834 ACATCCGACTGAAATCCAATTCC 59.052 43.478 0.00 0.00 0.00 3.01
2417 2525 3.712016 TCCGACTGAAATCCAATTCCA 57.288 42.857 0.00 0.00 0.00 3.53
2418 2526 4.235079 TCCGACTGAAATCCAATTCCAT 57.765 40.909 0.00 0.00 0.00 3.41
2419 2527 4.599041 TCCGACTGAAATCCAATTCCATT 58.401 39.130 0.00 0.00 0.00 3.16
2420 2528 5.016173 TCCGACTGAAATCCAATTCCATTT 58.984 37.500 0.00 0.00 0.00 2.32
2421 2529 5.125417 TCCGACTGAAATCCAATTCCATTTC 59.875 40.000 10.07 10.07 38.83 2.17
2422 2530 5.105797 CCGACTGAAATCCAATTCCATTTCA 60.106 40.000 15.71 15.71 43.54 2.69
2426 2534 6.914654 TGAAATCCAATTCCATTTCAGTCA 57.085 33.333 13.75 0.00 41.80 3.41
2427 2535 7.484993 TGAAATCCAATTCCATTTCAGTCAT 57.515 32.000 13.75 0.00 41.80 3.06
2428 2536 8.592529 TGAAATCCAATTCCATTTCAGTCATA 57.407 30.769 13.75 0.00 41.80 2.15
2429 2537 9.204337 TGAAATCCAATTCCATTTCAGTCATAT 57.796 29.630 13.75 0.00 41.80 1.78
2435 2543 9.918630 CCAATTCCATTTCAGTCATATATTTCC 57.081 33.333 0.00 0.00 0.00 3.13
2438 2546 8.463930 TTCCATTTCAGTCATATATTTCCACC 57.536 34.615 0.00 0.00 0.00 4.61
2439 2547 6.710295 TCCATTTCAGTCATATATTTCCACCG 59.290 38.462 0.00 0.00 0.00 4.94
2440 2548 6.486657 CCATTTCAGTCATATATTTCCACCGT 59.513 38.462 0.00 0.00 0.00 4.83
2441 2549 6.918892 TTTCAGTCATATATTTCCACCGTG 57.081 37.500 0.00 0.00 0.00 4.94
2442 2550 5.607939 TCAGTCATATATTTCCACCGTGT 57.392 39.130 0.00 0.00 0.00 4.49
2443 2551 5.984725 TCAGTCATATATTTCCACCGTGTT 58.015 37.500 0.00 0.00 0.00 3.32
2444 2552 6.411376 TCAGTCATATATTTCCACCGTGTTT 58.589 36.000 0.00 0.00 0.00 2.83
2445 2553 6.882140 TCAGTCATATATTTCCACCGTGTTTT 59.118 34.615 0.00 0.00 0.00 2.43
2446 2554 8.041919 TCAGTCATATATTTCCACCGTGTTTTA 58.958 33.333 0.00 0.00 0.00 1.52
2447 2555 8.120465 CAGTCATATATTTCCACCGTGTTTTAC 58.880 37.037 0.00 0.00 0.00 2.01
2448 2556 7.825270 AGTCATATATTTCCACCGTGTTTTACA 59.175 33.333 0.00 0.00 0.00 2.41
2449 2557 8.617809 GTCATATATTTCCACCGTGTTTTACAT 58.382 33.333 0.00 0.00 0.00 2.29
2450 2558 8.832521 TCATATATTTCCACCGTGTTTTACATC 58.167 33.333 0.00 0.00 0.00 3.06
2451 2559 4.776795 ATTTCCACCGTGTTTTACATCC 57.223 40.909 0.00 0.00 0.00 3.51
2452 2560 1.798283 TCCACCGTGTTTTACATCCG 58.202 50.000 0.00 0.00 0.00 4.18
2453 2561 1.343789 TCCACCGTGTTTTACATCCGA 59.656 47.619 0.00 0.00 0.00 4.55
2454 2562 2.027929 TCCACCGTGTTTTACATCCGAT 60.028 45.455 0.00 0.00 0.00 4.18
2455 2563 2.745281 CCACCGTGTTTTACATCCGATT 59.255 45.455 0.00 0.00 0.00 3.34
2456 2564 3.425625 CCACCGTGTTTTACATCCGATTG 60.426 47.826 0.00 0.00 0.00 2.67
2457 2565 3.187637 CACCGTGTTTTACATCCGATTGT 59.812 43.478 0.00 0.00 0.00 2.71
2458 2566 3.434299 ACCGTGTTTTACATCCGATTGTC 59.566 43.478 0.00 0.00 0.00 3.18
2459 2567 3.682858 CCGTGTTTTACATCCGATTGTCT 59.317 43.478 0.00 0.00 0.00 3.41
2460 2568 4.201685 CCGTGTTTTACATCCGATTGTCTC 60.202 45.833 0.00 0.00 0.00 3.36
2461 2569 4.625742 CGTGTTTTACATCCGATTGTCTCT 59.374 41.667 0.00 0.00 0.00 3.10
2462 2570 5.120208 CGTGTTTTACATCCGATTGTCTCTT 59.880 40.000 0.00 0.00 0.00 2.85
2463 2571 6.307155 GTGTTTTACATCCGATTGTCTCTTG 58.693 40.000 0.00 0.00 0.00 3.02
2464 2572 5.995282 TGTTTTACATCCGATTGTCTCTTGT 59.005 36.000 0.00 0.00 0.00 3.16
2465 2573 6.147164 TGTTTTACATCCGATTGTCTCTTGTC 59.853 38.462 0.00 0.00 0.00 3.18
2466 2574 5.661056 TTACATCCGATTGTCTCTTGTCT 57.339 39.130 0.00 0.00 0.00 3.41
2467 2575 4.543590 ACATCCGATTGTCTCTTGTCTT 57.456 40.909 0.00 0.00 0.00 3.01
2468 2576 4.899502 ACATCCGATTGTCTCTTGTCTTT 58.100 39.130 0.00 0.00 0.00 2.52
2469 2577 4.932200 ACATCCGATTGTCTCTTGTCTTTC 59.068 41.667 0.00 0.00 0.00 2.62
2470 2578 3.926616 TCCGATTGTCTCTTGTCTTTCC 58.073 45.455 0.00 0.00 0.00 3.13
2471 2579 3.003480 CCGATTGTCTCTTGTCTTTCCC 58.997 50.000 0.00 0.00 0.00 3.97
2472 2580 3.307059 CCGATTGTCTCTTGTCTTTCCCT 60.307 47.826 0.00 0.00 0.00 4.20
2473 2581 3.929610 CGATTGTCTCTTGTCTTTCCCTC 59.070 47.826 0.00 0.00 0.00 4.30
2474 2582 4.322349 CGATTGTCTCTTGTCTTTCCCTCT 60.322 45.833 0.00 0.00 0.00 3.69
2475 2583 4.608948 TTGTCTCTTGTCTTTCCCTCTC 57.391 45.455 0.00 0.00 0.00 3.20
2476 2584 3.850752 TGTCTCTTGTCTTTCCCTCTCT 58.149 45.455 0.00 0.00 0.00 3.10
2477 2585 3.829601 TGTCTCTTGTCTTTCCCTCTCTC 59.170 47.826 0.00 0.00 0.00 3.20
2478 2586 4.086457 GTCTCTTGTCTTTCCCTCTCTCT 58.914 47.826 0.00 0.00 0.00 3.10
2479 2587 4.526650 GTCTCTTGTCTTTCCCTCTCTCTT 59.473 45.833 0.00 0.00 0.00 2.85
2480 2588 4.770010 TCTCTTGTCTTTCCCTCTCTCTTC 59.230 45.833 0.00 0.00 0.00 2.87
2481 2589 3.835395 TCTTGTCTTTCCCTCTCTCTTCC 59.165 47.826 0.00 0.00 0.00 3.46
2482 2590 3.551635 TGTCTTTCCCTCTCTCTTCCT 57.448 47.619 0.00 0.00 0.00 3.36
2483 2591 3.863086 TGTCTTTCCCTCTCTCTTCCTT 58.137 45.455 0.00 0.00 0.00 3.36
2484 2592 4.235372 TGTCTTTCCCTCTCTCTTCCTTT 58.765 43.478 0.00 0.00 0.00 3.11
2485 2593 5.403512 TGTCTTTCCCTCTCTCTTCCTTTA 58.596 41.667 0.00 0.00 0.00 1.85
2486 2594 5.844516 TGTCTTTCCCTCTCTCTTCCTTTAA 59.155 40.000 0.00 0.00 0.00 1.52
2487 2595 6.329197 TGTCTTTCCCTCTCTCTTCCTTTAAA 59.671 38.462 0.00 0.00 0.00 1.52
2488 2596 7.147373 TGTCTTTCCCTCTCTCTTCCTTTAAAA 60.147 37.037 0.00 0.00 0.00 1.52
2489 2597 7.720074 GTCTTTCCCTCTCTCTTCCTTTAAAAA 59.280 37.037 0.00 0.00 0.00 1.94
2490 2598 8.448816 TCTTTCCCTCTCTCTTCCTTTAAAAAT 58.551 33.333 0.00 0.00 0.00 1.82
2491 2599 8.637196 TTTCCCTCTCTCTTCCTTTAAAAATC 57.363 34.615 0.00 0.00 0.00 2.17
2492 2600 7.329746 TCCCTCTCTCTTCCTTTAAAAATCA 57.670 36.000 0.00 0.00 0.00 2.57
2493 2601 7.755618 TCCCTCTCTCTTCCTTTAAAAATCAA 58.244 34.615 0.00 0.00 0.00 2.57
2494 2602 8.224720 TCCCTCTCTCTTCCTTTAAAAATCAAA 58.775 33.333 0.00 0.00 0.00 2.69
2495 2603 8.860088 CCCTCTCTCTTCCTTTAAAAATCAAAA 58.140 33.333 0.00 0.00 0.00 2.44
2503 2611 9.261180 CTTCCTTTAAAAATCAAAAAGAGACCC 57.739 33.333 0.00 0.00 33.05 4.46
2504 2612 8.547481 TCCTTTAAAAATCAAAAAGAGACCCT 57.453 30.769 0.00 0.00 33.05 4.34
2505 2613 8.421002 TCCTTTAAAAATCAAAAAGAGACCCTG 58.579 33.333 0.00 0.00 33.05 4.45
2506 2614 8.421002 CCTTTAAAAATCAAAAAGAGACCCTGA 58.579 33.333 0.00 0.00 33.05 3.86
2507 2615 9.468532 CTTTAAAAATCAAAAAGAGACCCTGAG 57.531 33.333 0.00 0.00 33.05 3.35
2508 2616 8.760980 TTAAAAATCAAAAAGAGACCCTGAGA 57.239 30.769 0.00 0.00 0.00 3.27
2509 2617 7.660030 AAAAATCAAAAAGAGACCCTGAGAA 57.340 32.000 0.00 0.00 0.00 2.87
2510 2618 7.660030 AAAATCAAAAAGAGACCCTGAGAAA 57.340 32.000 0.00 0.00 0.00 2.52
2511 2619 6.890979 AATCAAAAAGAGACCCTGAGAAAG 57.109 37.500 0.00 0.00 0.00 2.62
2512 2620 5.630415 TCAAAAAGAGACCCTGAGAAAGA 57.370 39.130 0.00 0.00 0.00 2.52
2513 2621 5.368989 TCAAAAAGAGACCCTGAGAAAGAC 58.631 41.667 0.00 0.00 0.00 3.01
2514 2622 5.131142 TCAAAAAGAGACCCTGAGAAAGACT 59.869 40.000 0.00 0.00 0.00 3.24
2515 2623 6.326583 TCAAAAAGAGACCCTGAGAAAGACTA 59.673 38.462 0.00 0.00 0.00 2.59
2516 2624 6.749036 AAAAGAGACCCTGAGAAAGACTAA 57.251 37.500 0.00 0.00 0.00 2.24
2517 2625 6.749036 AAAGAGACCCTGAGAAAGACTAAA 57.251 37.500 0.00 0.00 0.00 1.85
2518 2626 5.731957 AGAGACCCTGAGAAAGACTAAAC 57.268 43.478 0.00 0.00 0.00 2.01
2519 2627 4.218852 AGAGACCCTGAGAAAGACTAAACG 59.781 45.833 0.00 0.00 0.00 3.60
2520 2628 3.258622 AGACCCTGAGAAAGACTAAACGG 59.741 47.826 0.00 0.00 0.00 4.44
2521 2629 2.302157 ACCCTGAGAAAGACTAAACGGG 59.698 50.000 0.00 0.00 35.32 5.28
2522 2630 2.302157 CCCTGAGAAAGACTAAACGGGT 59.698 50.000 0.00 0.00 0.00 5.28
2523 2631 3.586892 CCTGAGAAAGACTAAACGGGTC 58.413 50.000 0.00 0.00 0.00 4.46
2524 2632 3.586892 CTGAGAAAGACTAAACGGGTCC 58.413 50.000 0.00 0.00 34.56 4.46
2525 2633 2.301009 TGAGAAAGACTAAACGGGTCCC 59.699 50.000 0.00 0.00 34.56 4.46
2526 2634 1.627329 AGAAAGACTAAACGGGTCCCC 59.373 52.381 1.00 0.00 34.56 4.81
2537 2645 2.269978 GGGTCCCCGCTTTAAAACC 58.730 57.895 0.00 0.00 0.00 3.27
2538 2646 1.252904 GGGTCCCCGCTTTAAAACCC 61.253 60.000 7.59 7.59 39.60 4.11
2539 2647 1.252904 GGTCCCCGCTTTAAAACCCC 61.253 60.000 0.00 0.00 0.00 4.95
2540 2648 1.077086 TCCCCGCTTTAAAACCCCC 59.923 57.895 0.00 0.00 0.00 5.40
2541 2649 1.228925 CCCCGCTTTAAAACCCCCA 60.229 57.895 0.00 0.00 0.00 4.96
2542 2650 0.832559 CCCCGCTTTAAAACCCCCAA 60.833 55.000 0.00 0.00 0.00 4.12
2543 2651 1.049402 CCCGCTTTAAAACCCCCAAA 58.951 50.000 0.00 0.00 0.00 3.28
2544 2652 1.416772 CCCGCTTTAAAACCCCCAAAA 59.583 47.619 0.00 0.00 0.00 2.44
2545 2653 2.158798 CCCGCTTTAAAACCCCCAAAAA 60.159 45.455 0.00 0.00 0.00 1.94
2546 2654 3.135225 CCGCTTTAAAACCCCCAAAAAG 58.865 45.455 0.00 0.00 0.00 2.27
2547 2655 3.181464 CCGCTTTAAAACCCCCAAAAAGA 60.181 43.478 0.00 0.00 30.44 2.52
2548 2656 4.443621 CGCTTTAAAACCCCCAAAAAGAA 58.556 39.130 0.00 0.00 30.44 2.52
2549 2657 4.271533 CGCTTTAAAACCCCCAAAAAGAAC 59.728 41.667 0.00 0.00 30.44 3.01
2550 2658 5.186942 GCTTTAAAACCCCCAAAAAGAACA 58.813 37.500 0.00 0.00 30.44 3.18
2551 2659 5.648526 GCTTTAAAACCCCCAAAAAGAACAA 59.351 36.000 0.00 0.00 30.44 2.83
2552 2660 6.183360 GCTTTAAAACCCCCAAAAAGAACAAG 60.183 38.462 0.00 0.00 30.44 3.16
2553 2661 3.275617 AAACCCCCAAAAAGAACAAGC 57.724 42.857 0.00 0.00 0.00 4.01
2554 2662 2.174685 ACCCCCAAAAAGAACAAGCT 57.825 45.000 0.00 0.00 0.00 3.74
2555 2663 1.762370 ACCCCCAAAAAGAACAAGCTG 59.238 47.619 0.00 0.00 0.00 4.24
2556 2664 1.541015 CCCCCAAAAAGAACAAGCTGC 60.541 52.381 0.00 0.00 0.00 5.25
2557 2665 1.138661 CCCCAAAAAGAACAAGCTGCA 59.861 47.619 1.02 0.00 0.00 4.41
2558 2666 2.224354 CCCCAAAAAGAACAAGCTGCAT 60.224 45.455 1.02 0.00 0.00 3.96
2559 2667 3.006752 CCCCAAAAAGAACAAGCTGCATA 59.993 43.478 1.02 0.00 0.00 3.14
2560 2668 4.502950 CCCCAAAAAGAACAAGCTGCATAA 60.503 41.667 1.02 0.00 0.00 1.90
2561 2669 4.448732 CCCAAAAAGAACAAGCTGCATAAC 59.551 41.667 1.02 0.00 0.00 1.89
2562 2670 4.448732 CCAAAAAGAACAAGCTGCATAACC 59.551 41.667 1.02 0.00 0.00 2.85
2563 2671 5.291971 CAAAAAGAACAAGCTGCATAACCT 58.708 37.500 1.02 0.00 0.00 3.50
2564 2672 4.773323 AAAGAACAAGCTGCATAACCTC 57.227 40.909 1.02 0.00 0.00 3.85
2565 2673 3.710209 AGAACAAGCTGCATAACCTCT 57.290 42.857 1.02 0.00 0.00 3.69
2566 2674 3.604582 AGAACAAGCTGCATAACCTCTC 58.395 45.455 1.02 0.00 0.00 3.20
2567 2675 2.409948 ACAAGCTGCATAACCTCTCC 57.590 50.000 1.02 0.00 0.00 3.71
2568 2676 1.630369 ACAAGCTGCATAACCTCTCCA 59.370 47.619 1.02 0.00 0.00 3.86
2569 2677 2.240667 ACAAGCTGCATAACCTCTCCAT 59.759 45.455 1.02 0.00 0.00 3.41
2570 2678 2.877168 CAAGCTGCATAACCTCTCCATC 59.123 50.000 1.02 0.00 0.00 3.51
2571 2679 1.069823 AGCTGCATAACCTCTCCATCG 59.930 52.381 1.02 0.00 0.00 3.84
2572 2680 1.506493 CTGCATAACCTCTCCATCGC 58.494 55.000 0.00 0.00 0.00 4.58
2573 2681 0.829990 TGCATAACCTCTCCATCGCA 59.170 50.000 0.00 0.00 0.00 5.10
2574 2682 1.221414 GCATAACCTCTCCATCGCAC 58.779 55.000 0.00 0.00 0.00 5.34
2575 2683 1.473257 GCATAACCTCTCCATCGCACA 60.473 52.381 0.00 0.00 0.00 4.57
2576 2684 2.205074 CATAACCTCTCCATCGCACAC 58.795 52.381 0.00 0.00 0.00 3.82
2577 2685 1.262417 TAACCTCTCCATCGCACACA 58.738 50.000 0.00 0.00 0.00 3.72
2578 2686 0.396435 AACCTCTCCATCGCACACAA 59.604 50.000 0.00 0.00 0.00 3.33
2579 2687 0.036952 ACCTCTCCATCGCACACAAG 60.037 55.000 0.00 0.00 0.00 3.16
2580 2688 0.247460 CCTCTCCATCGCACACAAGA 59.753 55.000 0.00 0.00 0.00 3.02
2581 2689 1.338105 CCTCTCCATCGCACACAAGAA 60.338 52.381 0.00 0.00 0.00 2.52
2582 2690 1.728971 CTCTCCATCGCACACAAGAAC 59.271 52.381 0.00 0.00 0.00 3.01
2583 2691 1.069978 TCTCCATCGCACACAAGAACA 59.930 47.619 0.00 0.00 0.00 3.18
2584 2692 1.872952 CTCCATCGCACACAAGAACAA 59.127 47.619 0.00 0.00 0.00 2.83
2585 2693 1.872952 TCCATCGCACACAAGAACAAG 59.127 47.619 0.00 0.00 0.00 3.16
2586 2694 1.872952 CCATCGCACACAAGAACAAGA 59.127 47.619 0.00 0.00 0.00 3.02
2587 2695 2.290367 CCATCGCACACAAGAACAAGAA 59.710 45.455 0.00 0.00 0.00 2.52
2588 2696 3.548587 CATCGCACACAAGAACAAGAAG 58.451 45.455 0.00 0.00 0.00 2.85
2589 2697 1.330521 TCGCACACAAGAACAAGAAGC 59.669 47.619 0.00 0.00 0.00 3.86
2590 2698 1.063912 CGCACACAAGAACAAGAAGCA 59.936 47.619 0.00 0.00 0.00 3.91
2591 2699 2.477694 CGCACACAAGAACAAGAAGCAA 60.478 45.455 0.00 0.00 0.00 3.91
2592 2700 3.510719 GCACACAAGAACAAGAAGCAAA 58.489 40.909 0.00 0.00 0.00 3.68
2593 2701 3.304293 GCACACAAGAACAAGAAGCAAAC 59.696 43.478 0.00 0.00 0.00 2.93
2594 2702 4.484236 CACACAAGAACAAGAAGCAAACA 58.516 39.130 0.00 0.00 0.00 2.83
2595 2703 4.324402 CACACAAGAACAAGAAGCAAACAC 59.676 41.667 0.00 0.00 0.00 3.32
2596 2704 3.543494 CACAAGAACAAGAAGCAAACACG 59.457 43.478 0.00 0.00 0.00 4.49
2597 2705 3.108144 CAAGAACAAGAAGCAAACACGG 58.892 45.455 0.00 0.00 0.00 4.94
2598 2706 1.065551 AGAACAAGAAGCAAACACGGC 59.934 47.619 0.00 0.00 0.00 5.68
2599 2707 0.248458 AACAAGAAGCAAACACGGCG 60.248 50.000 4.80 4.80 36.08 6.46
2600 2708 1.370414 CAAGAAGCAAACACGGCGG 60.370 57.895 13.24 2.35 36.08 6.13
2601 2709 2.551912 AAGAAGCAAACACGGCGGG 61.552 57.895 8.04 8.04 36.08 6.13
2602 2710 4.038080 GAAGCAAACACGGCGGGG 62.038 66.667 16.11 6.70 36.08 5.73
2603 2711 4.572571 AAGCAAACACGGCGGGGA 62.573 61.111 16.11 0.00 36.08 4.81
2604 2712 3.860930 AAGCAAACACGGCGGGGAT 62.861 57.895 16.11 0.00 36.08 3.85
2605 2713 3.370231 GCAAACACGGCGGGGATT 61.370 61.111 16.11 5.17 0.00 3.01
2606 2714 2.874751 CAAACACGGCGGGGATTC 59.125 61.111 16.11 0.00 0.00 2.52
2607 2715 2.360726 AAACACGGCGGGGATTCC 60.361 61.111 16.11 0.00 0.00 3.01
2632 2740 1.909302 TGGATTTCCAGGTGAGAGACC 59.091 52.381 0.00 0.00 46.58 3.85
2643 2751 2.445614 AGAGACCTCTCCGGCCAA 59.554 61.111 2.24 0.00 43.88 4.52
2644 2752 1.229209 AGAGACCTCTCCGGCCAAA 60.229 57.895 2.24 0.00 43.88 3.28
2645 2753 1.079057 GAGACCTCTCCGGCCAAAC 60.079 63.158 2.24 0.00 37.02 2.93
2646 2754 1.536662 AGACCTCTCCGGCCAAACT 60.537 57.895 2.24 0.00 35.61 2.66
2647 2755 1.128188 AGACCTCTCCGGCCAAACTT 61.128 55.000 2.24 0.00 35.61 2.66
2648 2756 0.673956 GACCTCTCCGGCCAAACTTC 60.674 60.000 2.24 0.00 35.61 3.01
2649 2757 1.128188 ACCTCTCCGGCCAAACTTCT 61.128 55.000 2.24 0.00 35.61 2.85
2650 2758 0.391793 CCTCTCCGGCCAAACTTCTC 60.392 60.000 2.24 0.00 0.00 2.87
2651 2759 0.610687 CTCTCCGGCCAAACTTCTCT 59.389 55.000 2.24 0.00 0.00 3.10
2652 2760 0.321671 TCTCCGGCCAAACTTCTCTG 59.678 55.000 2.24 0.00 0.00 3.35
2653 2761 1.301677 CTCCGGCCAAACTTCTCTGC 61.302 60.000 2.24 0.00 0.00 4.26
2654 2762 2.680913 CCGGCCAAACTTCTCTGCG 61.681 63.158 2.24 0.00 0.00 5.18
2655 2763 1.961277 CGGCCAAACTTCTCTGCGT 60.961 57.895 2.24 0.00 0.00 5.24
2656 2764 1.869690 GGCCAAACTTCTCTGCGTC 59.130 57.895 0.00 0.00 0.00 5.19
2657 2765 1.578206 GGCCAAACTTCTCTGCGTCC 61.578 60.000 0.00 0.00 0.00 4.79
2658 2766 1.578206 GCCAAACTTCTCTGCGTCCC 61.578 60.000 0.00 0.00 0.00 4.46
2659 2767 0.035458 CCAAACTTCTCTGCGTCCCT 59.965 55.000 0.00 0.00 0.00 4.20
2660 2768 1.543429 CCAAACTTCTCTGCGTCCCTT 60.543 52.381 0.00 0.00 0.00 3.95
2661 2769 2.222027 CAAACTTCTCTGCGTCCCTTT 58.778 47.619 0.00 0.00 0.00 3.11
2662 2770 2.171341 AACTTCTCTGCGTCCCTTTC 57.829 50.000 0.00 0.00 0.00 2.62
2663 2771 1.048601 ACTTCTCTGCGTCCCTTTCA 58.951 50.000 0.00 0.00 0.00 2.69
2664 2772 1.270358 ACTTCTCTGCGTCCCTTTCAC 60.270 52.381 0.00 0.00 0.00 3.18
2665 2773 1.001406 CTTCTCTGCGTCCCTTTCACT 59.999 52.381 0.00 0.00 0.00 3.41
2666 2774 1.919240 TCTCTGCGTCCCTTTCACTA 58.081 50.000 0.00 0.00 0.00 2.74
2667 2775 2.244695 TCTCTGCGTCCCTTTCACTAA 58.755 47.619 0.00 0.00 0.00 2.24
2668 2776 2.029290 TCTCTGCGTCCCTTTCACTAAC 60.029 50.000 0.00 0.00 0.00 2.34
2669 2777 1.068474 CTGCGTCCCTTTCACTAACG 58.932 55.000 0.00 0.00 36.48 3.18
2671 2779 3.509388 CGTCCCTTTCACTAACGCT 57.491 52.632 0.00 0.00 0.00 5.07
2672 2780 1.347320 CGTCCCTTTCACTAACGCTC 58.653 55.000 0.00 0.00 0.00 5.03
2673 2781 1.723220 GTCCCTTTCACTAACGCTCC 58.277 55.000 0.00 0.00 0.00 4.70
2674 2782 1.275573 GTCCCTTTCACTAACGCTCCT 59.724 52.381 0.00 0.00 0.00 3.69
2675 2783 1.549170 TCCCTTTCACTAACGCTCCTC 59.451 52.381 0.00 0.00 0.00 3.71
2676 2784 1.405661 CCCTTTCACTAACGCTCCTCC 60.406 57.143 0.00 0.00 0.00 4.30
2677 2785 1.405661 CCTTTCACTAACGCTCCTCCC 60.406 57.143 0.00 0.00 0.00 4.30
2678 2786 1.275291 CTTTCACTAACGCTCCTCCCA 59.725 52.381 0.00 0.00 0.00 4.37
2679 2787 1.568504 TTCACTAACGCTCCTCCCAT 58.431 50.000 0.00 0.00 0.00 4.00
2680 2788 1.112113 TCACTAACGCTCCTCCCATC 58.888 55.000 0.00 0.00 0.00 3.51
2681 2789 1.115467 CACTAACGCTCCTCCCATCT 58.885 55.000 0.00 0.00 0.00 2.90
2682 2790 1.115467 ACTAACGCTCCTCCCATCTG 58.885 55.000 0.00 0.00 0.00 2.90
2683 2791 1.115467 CTAACGCTCCTCCCATCTGT 58.885 55.000 0.00 0.00 0.00 3.41
2684 2792 0.824109 TAACGCTCCTCCCATCTGTG 59.176 55.000 0.00 0.00 0.00 3.66
2685 2793 0.904865 AACGCTCCTCCCATCTGTGA 60.905 55.000 0.00 0.00 0.00 3.58
2686 2794 1.326213 ACGCTCCTCCCATCTGTGAG 61.326 60.000 0.00 0.00 0.00 3.51
2687 2795 1.039785 CGCTCCTCCCATCTGTGAGA 61.040 60.000 0.00 0.00 0.00 3.27
2688 2796 1.198713 GCTCCTCCCATCTGTGAGAA 58.801 55.000 0.00 0.00 0.00 2.87
2689 2797 1.556911 GCTCCTCCCATCTGTGAGAAA 59.443 52.381 0.00 0.00 0.00 2.52
2690 2798 2.679349 GCTCCTCCCATCTGTGAGAAAC 60.679 54.545 0.00 0.00 0.00 2.78
2691 2799 2.568956 CTCCTCCCATCTGTGAGAAACA 59.431 50.000 0.00 0.00 37.22 2.83
2700 2808 2.550830 TGTGAGAAACAGCTCCCTTC 57.449 50.000 0.00 0.00 33.78 3.46
2701 2809 1.768275 TGTGAGAAACAGCTCCCTTCA 59.232 47.619 0.00 0.00 33.78 3.02
2702 2810 2.147150 GTGAGAAACAGCTCCCTTCAC 58.853 52.381 0.00 0.00 33.95 3.18
2703 2811 1.072331 TGAGAAACAGCTCCCTTCACC 59.928 52.381 0.00 0.00 33.95 4.02
2704 2812 1.349357 GAGAAACAGCTCCCTTCACCT 59.651 52.381 0.00 0.00 0.00 4.00
2705 2813 1.777272 AGAAACAGCTCCCTTCACCTT 59.223 47.619 0.00 0.00 0.00 3.50
2706 2814 2.155279 GAAACAGCTCCCTTCACCTTC 58.845 52.381 0.00 0.00 0.00 3.46
2707 2815 1.439543 AACAGCTCCCTTCACCTTCT 58.560 50.000 0.00 0.00 0.00 2.85
2708 2816 1.439543 ACAGCTCCCTTCACCTTCTT 58.560 50.000 0.00 0.00 0.00 2.52
2709 2817 1.349357 ACAGCTCCCTTCACCTTCTTC 59.651 52.381 0.00 0.00 0.00 2.87
2710 2818 1.627834 CAGCTCCCTTCACCTTCTTCT 59.372 52.381 0.00 0.00 0.00 2.85
2711 2819 1.905894 AGCTCCCTTCACCTTCTTCTC 59.094 52.381 0.00 0.00 0.00 2.87
2712 2820 1.625818 GCTCCCTTCACCTTCTTCTCA 59.374 52.381 0.00 0.00 0.00 3.27
2713 2821 2.354604 GCTCCCTTCACCTTCTTCTCAG 60.355 54.545 0.00 0.00 0.00 3.35
2714 2822 1.625818 TCCCTTCACCTTCTTCTCAGC 59.374 52.381 0.00 0.00 0.00 4.26
2715 2823 1.349026 CCCTTCACCTTCTTCTCAGCA 59.651 52.381 0.00 0.00 0.00 4.41
2716 2824 2.026449 CCCTTCACCTTCTTCTCAGCAT 60.026 50.000 0.00 0.00 0.00 3.79
2717 2825 3.269178 CCTTCACCTTCTTCTCAGCATC 58.731 50.000 0.00 0.00 0.00 3.91
2718 2826 3.055240 CCTTCACCTTCTTCTCAGCATCT 60.055 47.826 0.00 0.00 0.00 2.90
2719 2827 3.606595 TCACCTTCTTCTCAGCATCTG 57.393 47.619 0.00 0.00 0.00 2.90
2720 2828 2.008329 CACCTTCTTCTCAGCATCTGC 58.992 52.381 0.00 0.00 42.49 4.26
2721 2829 1.627329 ACCTTCTTCTCAGCATCTGCA 59.373 47.619 4.79 0.00 45.16 4.41
2722 2830 2.239150 ACCTTCTTCTCAGCATCTGCAT 59.761 45.455 4.79 0.00 45.16 3.96
2723 2831 2.614520 CCTTCTTCTCAGCATCTGCATG 59.385 50.000 4.79 0.00 45.16 4.06
2724 2832 3.532542 CTTCTTCTCAGCATCTGCATGA 58.467 45.455 4.79 4.85 45.16 3.07
2725 2833 3.622166 TCTTCTCAGCATCTGCATGAA 57.378 42.857 4.79 4.98 45.16 2.57
2726 2834 3.946606 TCTTCTCAGCATCTGCATGAAA 58.053 40.909 4.79 3.37 45.16 2.69
2727 2835 4.329392 TCTTCTCAGCATCTGCATGAAAA 58.671 39.130 4.79 0.00 45.16 2.29
2728 2836 4.155462 TCTTCTCAGCATCTGCATGAAAAC 59.845 41.667 4.79 0.00 45.16 2.43
2729 2837 3.414269 TCTCAGCATCTGCATGAAAACA 58.586 40.909 4.79 0.00 45.16 2.83
2730 2838 3.439129 TCTCAGCATCTGCATGAAAACAG 59.561 43.478 4.79 0.00 45.16 3.16
2731 2839 3.414269 TCAGCATCTGCATGAAAACAGA 58.586 40.909 4.79 0.00 46.34 3.41
2732 2840 3.439129 TCAGCATCTGCATGAAAACAGAG 59.561 43.478 4.79 0.00 45.55 3.35
2733 2841 2.753452 AGCATCTGCATGAAAACAGAGG 59.247 45.455 4.79 2.44 45.55 3.69
2734 2842 2.159282 GCATCTGCATGAAAACAGAGGG 60.159 50.000 12.53 6.53 45.55 4.30
2735 2843 2.205022 TCTGCATGAAAACAGAGGGG 57.795 50.000 0.00 0.00 37.99 4.79
2736 2844 1.704628 TCTGCATGAAAACAGAGGGGA 59.295 47.619 0.00 0.00 37.99 4.81
2737 2845 2.108075 TCTGCATGAAAACAGAGGGGAA 59.892 45.455 0.00 0.00 37.99 3.97
2738 2846 2.490903 CTGCATGAAAACAGAGGGGAAG 59.509 50.000 0.00 0.00 35.90 3.46
2739 2847 2.158475 TGCATGAAAACAGAGGGGAAGT 60.158 45.455 0.00 0.00 0.00 3.01
2740 2848 2.893489 GCATGAAAACAGAGGGGAAGTT 59.107 45.455 0.00 0.00 0.00 2.66
2741 2849 4.079253 GCATGAAAACAGAGGGGAAGTTA 58.921 43.478 0.00 0.00 0.00 2.24
2746 2854 5.367352 TGAAAACAGAGGGGAAGTTACTACA 59.633 40.000 0.00 0.00 0.00 2.74
2747 2855 4.886496 AACAGAGGGGAAGTTACTACAC 57.114 45.455 0.00 0.00 0.00 2.90
2761 2869 6.560711 AGTTACTACACCTTTGCAACAAAAG 58.439 36.000 0.00 0.00 36.99 2.27
2775 2883 6.096695 TGCAACAAAAGTAAGAAACCAGAAC 58.903 36.000 0.00 0.00 0.00 3.01
2819 2927 7.174080 TCGTTGGATGAACATAGACATGAAAAA 59.826 33.333 0.00 0.00 35.96 1.94
2835 2943 8.665643 ACATGAAAAAGCAAGATCAAAATCAA 57.334 26.923 0.00 0.00 34.07 2.57
2866 2974 7.951591 ACATAGTGGAATTACAGCAAGTTTTT 58.048 30.769 0.00 0.00 0.00 1.94
2881 2989 7.373966 CAGCAAGTTTTTACAATGATTTTGCAC 59.626 33.333 8.92 0.00 40.43 4.57
2947 3055 9.482627 AGCAGTAGATTAATAGTGAATTAGCAC 57.517 33.333 0.00 0.00 39.05 4.40
2981 3089 9.515020 ACAGTAAAATGTTCACAGTAAAACATG 57.485 29.630 12.15 0.00 43.45 3.21
2982 3090 8.479280 CAGTAAAATGTTCACAGTAAAACATGC 58.521 33.333 12.15 5.99 43.45 4.06
3109 3217 8.447833 CACTGACATTACACCGTAAATTACATT 58.552 33.333 3.91 0.00 0.00 2.71
3151 3259 9.173021 TGAAAATTACACTACAATATGGACTGG 57.827 33.333 0.00 0.00 0.00 4.00
3163 3271 7.830739 ACAATATGGACTGGAATTTTCAGAAC 58.169 34.615 11.76 4.40 36.22 3.01
3184 3292 1.246649 TGGCATTGCAAGTACACAGG 58.753 50.000 11.39 0.00 0.00 4.00
3229 3337 2.205074 CATGTCCAATCTACGCAGACC 58.795 52.381 0.00 0.00 32.25 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.678048 CAGTTAGGCCAACTCCAGCC 60.678 60.000 15.13 0.00 44.48 4.85
2 3 1.308783 GCAGTTAGGCCAACTCCAGC 61.309 60.000 15.13 12.70 44.48 4.85
3 4 0.036732 TGCAGTTAGGCCAACTCCAG 59.963 55.000 15.13 8.02 44.48 3.86
4 5 0.476338 TTGCAGTTAGGCCAACTCCA 59.524 50.000 15.13 11.29 44.48 3.86
39 40 2.174210 CACAAGGGGAGATCATGGATGT 59.826 50.000 0.00 0.00 0.00 3.06
45 46 4.044571 TCTTTTTCCACAAGGGGAGATCAT 59.955 41.667 0.00 0.00 38.42 2.45
49 50 3.461831 TCTTCTTTTTCCACAAGGGGAGA 59.538 43.478 0.00 0.00 38.42 3.71
50 51 3.823304 CTCTTCTTTTTCCACAAGGGGAG 59.177 47.826 0.00 0.00 38.42 4.30
53 54 5.009110 GTCTTCTCTTCTTTTTCCACAAGGG 59.991 44.000 0.00 0.00 34.83 3.95
75 76 2.598439 CGTACGCGTGTATGTAGAGGTC 60.598 54.545 24.59 0.00 33.68 3.85
115 116 1.066858 GTGAGCGAGTCAGATTTCCCA 60.067 52.381 0.00 0.00 35.13 4.37
117 118 1.646189 GGTGAGCGAGTCAGATTTCC 58.354 55.000 0.00 0.00 35.13 3.13
118 119 1.646189 GGGTGAGCGAGTCAGATTTC 58.354 55.000 0.00 0.00 35.13 2.17
130 131 2.781595 ATCAACGGTGTCGGGTGAGC 62.782 60.000 0.00 0.00 41.39 4.26
210 211 1.502231 GATGTGGATCGATCGGTTGG 58.498 55.000 18.81 0.00 0.00 3.77
212 213 1.119684 TGGATGTGGATCGATCGGTT 58.880 50.000 18.81 2.91 0.00 4.44
243 244 2.818132 GGGAGAGGATGACTGGCG 59.182 66.667 0.00 0.00 0.00 5.69
249 250 1.075301 TGATGGCGGGAGAGGATGA 60.075 57.895 0.00 0.00 0.00 2.92
252 253 2.764128 GGTGATGGCGGGAGAGGA 60.764 66.667 0.00 0.00 0.00 3.71
257 266 2.220586 TGACTTGGTGATGGCGGGA 61.221 57.895 0.00 0.00 0.00 5.14
259 268 2.040544 GGTGACTTGGTGATGGCGG 61.041 63.158 0.00 0.00 0.00 6.13
316 325 1.305219 CCGGAACCGTGCAATCATGT 61.305 55.000 12.23 0.00 37.81 3.21
343 352 2.181021 GAGTGAGTACGTGGCCGG 59.819 66.667 0.00 0.00 38.78 6.13
426 436 3.721706 GACACTGGGAGCAGGGGG 61.722 72.222 0.00 0.00 0.00 5.40
427 437 2.930019 TGACACTGGGAGCAGGGG 60.930 66.667 0.00 0.00 0.00 4.79
739 782 4.007940 TGAAAACGAGCGGCGCAC 62.008 61.111 35.02 27.21 46.04 5.34
772 819 2.035155 GGTGCCGGGGTAAAAGCT 59.965 61.111 2.18 0.00 0.00 3.74
773 820 3.436924 CGGTGCCGGGGTAAAAGC 61.437 66.667 2.18 0.00 35.56 3.51
894 958 2.277072 CGGGCAGAGGAGAGGAGA 59.723 66.667 0.00 0.00 0.00 3.71
904 968 3.993865 TATGGAGGTGGCGGGCAGA 62.994 63.158 3.75 0.00 0.00 4.26
905 969 2.738213 GATATGGAGGTGGCGGGCAG 62.738 65.000 3.75 0.00 0.00 4.85
906 970 2.772191 ATATGGAGGTGGCGGGCA 60.772 61.111 0.00 0.00 0.00 5.36
909 973 0.686789 TGATGATATGGAGGTGGCGG 59.313 55.000 0.00 0.00 0.00 6.13
1125 1197 3.003763 AGCTTCGTCCCCACTCCC 61.004 66.667 0.00 0.00 0.00 4.30
1128 1200 1.674057 CTTGAGCTTCGTCCCCACT 59.326 57.895 0.00 0.00 0.00 4.00
1130 1202 3.068881 CCTTGAGCTTCGTCCCCA 58.931 61.111 0.00 0.00 0.00 4.96
1135 1207 2.430921 CGTCGCCTTGAGCTTCGT 60.431 61.111 0.00 0.00 40.39 3.85
1427 1502 4.384599 TCGACGAGGACGAGGAAA 57.615 55.556 0.00 0.00 42.66 3.13
1632 1707 1.333791 GGCACCGTCTTTGAAGTTTCG 60.334 52.381 0.00 0.00 0.00 3.46
1851 1926 2.261052 GTGCAGAGCAGCTCGAGT 59.739 61.111 16.99 0.00 40.08 4.18
2206 2297 0.105453 AGTGGAGTGGAGTGGAGTGT 60.105 55.000 0.00 0.00 0.00 3.55
2226 2317 3.490078 CCATTCTACTCGAGCTTCACTCC 60.490 52.174 13.61 0.00 43.01 3.85
2227 2318 3.129638 ACCATTCTACTCGAGCTTCACTC 59.870 47.826 13.61 0.00 42.47 3.51
2229 2320 3.512033 ACCATTCTACTCGAGCTTCAC 57.488 47.619 13.61 0.00 0.00 3.18
2267 2363 4.112341 CGTCCCGTCAGTCCGTCC 62.112 72.222 0.00 0.00 0.00 4.79
2268 2364 4.112341 CCGTCCCGTCAGTCCGTC 62.112 72.222 0.00 0.00 0.00 4.79
2271 2367 4.436998 CAGCCGTCCCGTCAGTCC 62.437 72.222 0.00 0.00 0.00 3.85
2272 2368 2.711922 ATCAGCCGTCCCGTCAGTC 61.712 63.158 0.00 0.00 0.00 3.51
2273 2369 2.680352 ATCAGCCGTCCCGTCAGT 60.680 61.111 0.00 0.00 0.00 3.41
2274 2370 2.021068 ATCATCAGCCGTCCCGTCAG 62.021 60.000 0.00 0.00 0.00 3.51
2287 2391 3.153781 TCCGCCCGCTGATCATCA 61.154 61.111 0.00 0.00 0.00 3.07
2296 2400 4.899239 CAGATCCAGTCCGCCCGC 62.899 72.222 0.00 0.00 0.00 6.13
2297 2401 2.032860 AATCAGATCCAGTCCGCCCG 62.033 60.000 0.00 0.00 0.00 6.13
2298 2402 1.001406 CTAATCAGATCCAGTCCGCCC 59.999 57.143 0.00 0.00 0.00 6.13
2299 2403 1.001406 CCTAATCAGATCCAGTCCGCC 59.999 57.143 0.00 0.00 0.00 6.13
2327 2435 1.381056 ACCCAAGGCTGTTGCAACA 60.381 52.632 29.36 29.36 41.91 3.33
2328 2436 1.067916 CACCCAAGGCTGTTGCAAC 59.932 57.895 22.83 22.83 41.91 4.17
2329 2437 0.469705 ATCACCCAAGGCTGTTGCAA 60.470 50.000 0.00 0.00 41.91 4.08
2330 2438 0.469705 AATCACCCAAGGCTGTTGCA 60.470 50.000 0.00 0.00 41.91 4.08
2331 2439 0.037975 CAATCACCCAAGGCTGTTGC 60.038 55.000 0.00 0.00 38.76 4.17
2332 2440 1.619654 TCAATCACCCAAGGCTGTTG 58.380 50.000 0.00 0.00 0.00 3.33
2333 2441 2.610438 ATCAATCACCCAAGGCTGTT 57.390 45.000 0.00 0.00 0.00 3.16
2334 2442 2.610438 AATCAATCACCCAAGGCTGT 57.390 45.000 0.00 0.00 0.00 4.40
2335 2443 3.355378 TGTAATCAATCACCCAAGGCTG 58.645 45.455 0.00 0.00 0.00 4.85
2336 2444 3.737559 TGTAATCAATCACCCAAGGCT 57.262 42.857 0.00 0.00 0.00 4.58
2337 2445 5.359576 TGTAATGTAATCAATCACCCAAGGC 59.640 40.000 0.00 0.00 0.00 4.35
2338 2446 7.587037 ATGTAATGTAATCAATCACCCAAGG 57.413 36.000 0.00 0.00 0.00 3.61
2339 2447 9.950680 GTAATGTAATGTAATCAATCACCCAAG 57.049 33.333 0.00 0.00 0.00 3.61
2340 2448 9.467796 TGTAATGTAATGTAATCAATCACCCAA 57.532 29.630 0.00 0.00 0.00 4.12
2341 2449 9.639563 ATGTAATGTAATGTAATCAATCACCCA 57.360 29.630 0.00 0.00 0.00 4.51
2364 2472 9.386122 ACAGACAATCCCTCTATTATCTAATGT 57.614 33.333 0.00 0.00 0.00 2.71
2370 2478 9.832445 TGTAAAACAGACAATCCCTCTATTATC 57.168 33.333 0.00 0.00 0.00 1.75
2372 2480 9.832445 GATGTAAAACAGACAATCCCTCTATTA 57.168 33.333 0.00 0.00 0.00 0.98
2373 2481 7.775561 GGATGTAAAACAGACAATCCCTCTATT 59.224 37.037 0.00 0.00 0.00 1.73
2374 2482 7.283329 GGATGTAAAACAGACAATCCCTCTAT 58.717 38.462 0.00 0.00 0.00 1.98
2375 2483 6.629515 CGGATGTAAAACAGACAATCCCTCTA 60.630 42.308 0.00 0.00 0.00 2.43
2376 2484 5.501156 GGATGTAAAACAGACAATCCCTCT 58.499 41.667 0.00 0.00 0.00 3.69
2377 2485 4.332819 CGGATGTAAAACAGACAATCCCTC 59.667 45.833 0.00 0.00 0.00 4.30
2378 2486 4.019681 TCGGATGTAAAACAGACAATCCCT 60.020 41.667 0.00 0.00 0.00 4.20
2379 2487 4.094442 GTCGGATGTAAAACAGACAATCCC 59.906 45.833 0.00 0.00 33.05 3.85
2380 2488 4.935808 AGTCGGATGTAAAACAGACAATCC 59.064 41.667 0.00 0.00 34.66 3.01
2381 2489 5.637810 TCAGTCGGATGTAAAACAGACAATC 59.362 40.000 0.00 0.00 34.66 2.67
2382 2490 5.547465 TCAGTCGGATGTAAAACAGACAAT 58.453 37.500 0.00 0.00 34.66 2.71
2383 2491 4.951254 TCAGTCGGATGTAAAACAGACAA 58.049 39.130 0.00 0.00 34.66 3.18
2384 2492 4.594123 TCAGTCGGATGTAAAACAGACA 57.406 40.909 0.00 0.00 34.66 3.41
2385 2493 5.917541 TTTCAGTCGGATGTAAAACAGAC 57.082 39.130 0.00 0.00 0.00 3.51
2386 2494 5.642063 GGATTTCAGTCGGATGTAAAACAGA 59.358 40.000 0.00 0.00 0.00 3.41
2387 2495 5.411361 TGGATTTCAGTCGGATGTAAAACAG 59.589 40.000 0.00 0.00 0.00 3.16
2388 2496 5.309638 TGGATTTCAGTCGGATGTAAAACA 58.690 37.500 0.00 0.00 0.00 2.83
2389 2497 5.873179 TGGATTTCAGTCGGATGTAAAAC 57.127 39.130 0.00 0.00 0.00 2.43
2390 2498 7.362574 GGAATTGGATTTCAGTCGGATGTAAAA 60.363 37.037 0.00 0.00 0.00 1.52
2391 2499 6.094881 GGAATTGGATTTCAGTCGGATGTAAA 59.905 38.462 0.00 0.00 0.00 2.01
2392 2500 5.588648 GGAATTGGATTTCAGTCGGATGTAA 59.411 40.000 0.00 0.00 0.00 2.41
2393 2501 5.123227 GGAATTGGATTTCAGTCGGATGTA 58.877 41.667 0.00 0.00 0.00 2.29
2394 2502 3.947834 GGAATTGGATTTCAGTCGGATGT 59.052 43.478 0.00 0.00 0.00 3.06
2395 2503 3.947196 TGGAATTGGATTTCAGTCGGATG 59.053 43.478 0.00 0.00 0.00 3.51
2396 2504 4.235079 TGGAATTGGATTTCAGTCGGAT 57.765 40.909 0.00 0.00 0.00 4.18
2397 2505 3.712016 TGGAATTGGATTTCAGTCGGA 57.288 42.857 0.00 0.00 0.00 4.55
2398 2506 4.989279 AATGGAATTGGATTTCAGTCGG 57.011 40.909 0.00 0.00 33.44 4.79
2399 2507 5.953183 TGAAATGGAATTGGATTTCAGTCG 58.047 37.500 13.73 0.00 41.47 4.18
2403 2511 6.914654 TGACTGAAATGGAATTGGATTTCA 57.085 33.333 15.67 15.67 43.18 2.69
2409 2517 9.918630 GGAAATATATGACTGAAATGGAATTGG 57.081 33.333 0.00 0.00 36.10 3.16
2412 2520 9.082313 GGTGGAAATATATGACTGAAATGGAAT 57.918 33.333 0.00 0.00 0.00 3.01
2413 2521 7.228507 CGGTGGAAATATATGACTGAAATGGAA 59.771 37.037 0.00 0.00 0.00 3.53
2414 2522 6.710295 CGGTGGAAATATATGACTGAAATGGA 59.290 38.462 0.00 0.00 0.00 3.41
2415 2523 6.486657 ACGGTGGAAATATATGACTGAAATGG 59.513 38.462 0.00 0.00 0.00 3.16
2416 2524 7.012327 ACACGGTGGAAATATATGACTGAAATG 59.988 37.037 13.48 0.00 0.00 2.32
2417 2525 7.054124 ACACGGTGGAAATATATGACTGAAAT 58.946 34.615 13.48 0.00 0.00 2.17
2418 2526 6.411376 ACACGGTGGAAATATATGACTGAAA 58.589 36.000 13.48 0.00 0.00 2.69
2419 2527 5.984725 ACACGGTGGAAATATATGACTGAA 58.015 37.500 13.48 0.00 0.00 3.02
2420 2528 5.607939 ACACGGTGGAAATATATGACTGA 57.392 39.130 13.48 0.00 0.00 3.41
2421 2529 6.677781 AAACACGGTGGAAATATATGACTG 57.322 37.500 13.48 0.00 0.00 3.51
2422 2530 7.825270 TGTAAAACACGGTGGAAATATATGACT 59.175 33.333 13.48 0.00 0.00 3.41
2423 2531 7.976826 TGTAAAACACGGTGGAAATATATGAC 58.023 34.615 13.48 0.00 0.00 3.06
2424 2532 8.740123 ATGTAAAACACGGTGGAAATATATGA 57.260 30.769 13.48 0.00 0.00 2.15
2425 2533 8.073768 GGATGTAAAACACGGTGGAAATATATG 58.926 37.037 13.48 0.00 0.00 1.78
2426 2534 7.041644 CGGATGTAAAACACGGTGGAAATATAT 60.042 37.037 13.48 4.20 0.00 0.86
2427 2535 6.258287 CGGATGTAAAACACGGTGGAAATATA 59.742 38.462 13.48 0.00 0.00 0.86
2428 2536 5.065474 CGGATGTAAAACACGGTGGAAATAT 59.935 40.000 13.48 0.00 0.00 1.28
2429 2537 4.392445 CGGATGTAAAACACGGTGGAAATA 59.608 41.667 13.48 0.00 0.00 1.40
2430 2538 3.189702 CGGATGTAAAACACGGTGGAAAT 59.810 43.478 13.48 0.00 0.00 2.17
2431 2539 2.548904 CGGATGTAAAACACGGTGGAAA 59.451 45.455 13.48 0.00 0.00 3.13
2432 2540 2.144730 CGGATGTAAAACACGGTGGAA 58.855 47.619 13.48 0.00 0.00 3.53
2433 2541 1.343789 TCGGATGTAAAACACGGTGGA 59.656 47.619 13.48 0.00 0.00 4.02
2434 2542 1.798283 TCGGATGTAAAACACGGTGG 58.202 50.000 13.48 0.00 0.00 4.61
2435 2543 3.187637 ACAATCGGATGTAAAACACGGTG 59.812 43.478 6.58 6.58 0.00 4.94
2436 2544 3.404899 ACAATCGGATGTAAAACACGGT 58.595 40.909 0.00 0.00 0.00 4.83
2437 2545 3.682858 AGACAATCGGATGTAAAACACGG 59.317 43.478 0.00 0.00 32.57 4.94
2438 2546 4.625742 AGAGACAATCGGATGTAAAACACG 59.374 41.667 0.00 0.00 32.57 4.49
2439 2547 6.073222 ACAAGAGACAATCGGATGTAAAACAC 60.073 38.462 0.00 0.00 32.57 3.32
2440 2548 5.995282 ACAAGAGACAATCGGATGTAAAACA 59.005 36.000 0.00 0.00 32.57 2.83
2441 2549 6.369065 AGACAAGAGACAATCGGATGTAAAAC 59.631 38.462 0.00 0.00 32.57 2.43
2442 2550 6.464222 AGACAAGAGACAATCGGATGTAAAA 58.536 36.000 0.00 0.00 32.57 1.52
2443 2551 6.037786 AGACAAGAGACAATCGGATGTAAA 57.962 37.500 0.00 0.00 32.57 2.01
2444 2552 5.661056 AGACAAGAGACAATCGGATGTAA 57.339 39.130 0.00 0.00 32.57 2.41
2445 2553 5.661056 AAGACAAGAGACAATCGGATGTA 57.339 39.130 0.00 0.00 32.57 2.29
2446 2554 4.543590 AAGACAAGAGACAATCGGATGT 57.456 40.909 0.00 0.00 35.90 3.06
2447 2555 4.331168 GGAAAGACAAGAGACAATCGGATG 59.669 45.833 0.00 0.00 0.00 3.51
2448 2556 4.508662 GGAAAGACAAGAGACAATCGGAT 58.491 43.478 0.00 0.00 0.00 4.18
2449 2557 3.306780 GGGAAAGACAAGAGACAATCGGA 60.307 47.826 0.00 0.00 0.00 4.55
2450 2558 3.003480 GGGAAAGACAAGAGACAATCGG 58.997 50.000 0.00 0.00 0.00 4.18
2451 2559 3.929610 GAGGGAAAGACAAGAGACAATCG 59.070 47.826 0.00 0.00 0.00 3.34
2452 2560 5.046663 AGAGAGGGAAAGACAAGAGACAATC 60.047 44.000 0.00 0.00 0.00 2.67
2453 2561 4.843516 AGAGAGGGAAAGACAAGAGACAAT 59.156 41.667 0.00 0.00 0.00 2.71
2454 2562 4.227197 AGAGAGGGAAAGACAAGAGACAA 58.773 43.478 0.00 0.00 0.00 3.18
2455 2563 3.829601 GAGAGAGGGAAAGACAAGAGACA 59.170 47.826 0.00 0.00 0.00 3.41
2456 2564 4.086457 AGAGAGAGGGAAAGACAAGAGAC 58.914 47.826 0.00 0.00 0.00 3.36
2457 2565 4.396357 AGAGAGAGGGAAAGACAAGAGA 57.604 45.455 0.00 0.00 0.00 3.10
2458 2566 4.081697 GGAAGAGAGAGGGAAAGACAAGAG 60.082 50.000 0.00 0.00 0.00 2.85
2459 2567 3.835395 GGAAGAGAGAGGGAAAGACAAGA 59.165 47.826 0.00 0.00 0.00 3.02
2460 2568 3.837731 AGGAAGAGAGAGGGAAAGACAAG 59.162 47.826 0.00 0.00 0.00 3.16
2461 2569 3.863086 AGGAAGAGAGAGGGAAAGACAA 58.137 45.455 0.00 0.00 0.00 3.18
2462 2570 3.551635 AGGAAGAGAGAGGGAAAGACA 57.448 47.619 0.00 0.00 0.00 3.41
2463 2571 4.901197 AAAGGAAGAGAGAGGGAAAGAC 57.099 45.455 0.00 0.00 0.00 3.01
2464 2572 7.388638 TTTTAAAGGAAGAGAGAGGGAAAGA 57.611 36.000 0.00 0.00 0.00 2.52
2465 2573 8.642935 ATTTTTAAAGGAAGAGAGAGGGAAAG 57.357 34.615 0.00 0.00 0.00 2.62
2466 2574 8.224720 TGATTTTTAAAGGAAGAGAGAGGGAAA 58.775 33.333 0.00 0.00 0.00 3.13
2467 2575 7.755618 TGATTTTTAAAGGAAGAGAGAGGGAA 58.244 34.615 0.00 0.00 0.00 3.97
2468 2576 7.329746 TGATTTTTAAAGGAAGAGAGAGGGA 57.670 36.000 0.00 0.00 0.00 4.20
2469 2577 8.409358 TTTGATTTTTAAAGGAAGAGAGAGGG 57.591 34.615 0.00 0.00 0.00 4.30
2477 2585 9.261180 GGGTCTCTTTTTGATTTTTAAAGGAAG 57.739 33.333 0.00 0.00 31.45 3.46
2478 2586 8.988060 AGGGTCTCTTTTTGATTTTTAAAGGAA 58.012 29.630 0.00 0.00 31.45 3.36
2479 2587 8.421002 CAGGGTCTCTTTTTGATTTTTAAAGGA 58.579 33.333 0.00 0.00 31.45 3.36
2480 2588 8.421002 TCAGGGTCTCTTTTTGATTTTTAAAGG 58.579 33.333 0.00 0.00 31.45 3.11
2481 2589 9.468532 CTCAGGGTCTCTTTTTGATTTTTAAAG 57.531 33.333 0.00 0.00 0.00 1.85
2482 2590 9.196139 TCTCAGGGTCTCTTTTTGATTTTTAAA 57.804 29.630 0.00 0.00 0.00 1.52
2483 2591 8.760980 TCTCAGGGTCTCTTTTTGATTTTTAA 57.239 30.769 0.00 0.00 0.00 1.52
2484 2592 8.760980 TTCTCAGGGTCTCTTTTTGATTTTTA 57.239 30.769 0.00 0.00 0.00 1.52
2485 2593 7.660030 TTCTCAGGGTCTCTTTTTGATTTTT 57.340 32.000 0.00 0.00 0.00 1.94
2486 2594 7.561356 TCTTTCTCAGGGTCTCTTTTTGATTTT 59.439 33.333 0.00 0.00 0.00 1.82
2487 2595 7.013750 GTCTTTCTCAGGGTCTCTTTTTGATTT 59.986 37.037 0.00 0.00 0.00 2.17
2488 2596 6.488344 GTCTTTCTCAGGGTCTCTTTTTGATT 59.512 38.462 0.00 0.00 0.00 2.57
2489 2597 6.000840 GTCTTTCTCAGGGTCTCTTTTTGAT 58.999 40.000 0.00 0.00 0.00 2.57
2490 2598 5.131142 AGTCTTTCTCAGGGTCTCTTTTTGA 59.869 40.000 0.00 0.00 0.00 2.69
2491 2599 5.372373 AGTCTTTCTCAGGGTCTCTTTTTG 58.628 41.667 0.00 0.00 0.00 2.44
2492 2600 5.638530 AGTCTTTCTCAGGGTCTCTTTTT 57.361 39.130 0.00 0.00 0.00 1.94
2493 2601 6.749036 TTAGTCTTTCTCAGGGTCTCTTTT 57.251 37.500 0.00 0.00 0.00 2.27
2494 2602 6.526526 GTTTAGTCTTTCTCAGGGTCTCTTT 58.473 40.000 0.00 0.00 0.00 2.52
2495 2603 5.279056 CGTTTAGTCTTTCTCAGGGTCTCTT 60.279 44.000 0.00 0.00 0.00 2.85
2496 2604 4.218852 CGTTTAGTCTTTCTCAGGGTCTCT 59.781 45.833 0.00 0.00 0.00 3.10
2497 2605 4.487019 CGTTTAGTCTTTCTCAGGGTCTC 58.513 47.826 0.00 0.00 0.00 3.36
2498 2606 3.258622 CCGTTTAGTCTTTCTCAGGGTCT 59.741 47.826 0.00 0.00 0.00 3.85
2499 2607 3.586892 CCGTTTAGTCTTTCTCAGGGTC 58.413 50.000 0.00 0.00 0.00 4.46
2500 2608 2.302157 CCCGTTTAGTCTTTCTCAGGGT 59.698 50.000 0.00 0.00 0.00 4.34
2501 2609 2.302157 ACCCGTTTAGTCTTTCTCAGGG 59.698 50.000 0.00 0.00 41.87 4.45
2502 2610 3.586892 GACCCGTTTAGTCTTTCTCAGG 58.413 50.000 0.00 0.00 0.00 3.86
2503 2611 3.586892 GGACCCGTTTAGTCTTTCTCAG 58.413 50.000 0.00 0.00 34.56 3.35
2504 2612 2.301009 GGGACCCGTTTAGTCTTTCTCA 59.699 50.000 0.00 0.00 34.56 3.27
2505 2613 2.969990 GGGACCCGTTTAGTCTTTCTC 58.030 52.381 0.00 0.00 34.56 2.87
2521 2629 1.252904 GGGGGTTTTAAAGCGGGGAC 61.253 60.000 0.69 0.00 0.00 4.46
2522 2630 1.077086 GGGGGTTTTAAAGCGGGGA 59.923 57.895 0.69 0.00 0.00 4.81
2523 2631 0.832559 TTGGGGGTTTTAAAGCGGGG 60.833 55.000 0.69 0.00 0.00 5.73
2524 2632 1.049402 TTTGGGGGTTTTAAAGCGGG 58.951 50.000 0.69 0.00 0.00 6.13
2525 2633 2.912690 TTTTGGGGGTTTTAAAGCGG 57.087 45.000 0.69 0.00 0.00 5.52
2526 2634 4.061357 TCTTTTTGGGGGTTTTAAAGCG 57.939 40.909 0.69 0.00 0.00 4.68
2527 2635 5.186942 TGTTCTTTTTGGGGGTTTTAAAGC 58.813 37.500 0.00 0.00 0.00 3.51
2528 2636 6.183360 GCTTGTTCTTTTTGGGGGTTTTAAAG 60.183 38.462 0.00 0.00 0.00 1.85
2529 2637 5.648526 GCTTGTTCTTTTTGGGGGTTTTAAA 59.351 36.000 0.00 0.00 0.00 1.52
2530 2638 5.045505 AGCTTGTTCTTTTTGGGGGTTTTAA 60.046 36.000 0.00 0.00 0.00 1.52
2531 2639 4.471747 AGCTTGTTCTTTTTGGGGGTTTTA 59.528 37.500 0.00 0.00 0.00 1.52
2532 2640 3.265737 AGCTTGTTCTTTTTGGGGGTTTT 59.734 39.130 0.00 0.00 0.00 2.43
2533 2641 2.843730 AGCTTGTTCTTTTTGGGGGTTT 59.156 40.909 0.00 0.00 0.00 3.27
2534 2642 2.170397 CAGCTTGTTCTTTTTGGGGGTT 59.830 45.455 0.00 0.00 0.00 4.11
2535 2643 1.762370 CAGCTTGTTCTTTTTGGGGGT 59.238 47.619 0.00 0.00 0.00 4.95
2536 2644 1.541015 GCAGCTTGTTCTTTTTGGGGG 60.541 52.381 0.00 0.00 0.00 5.40
2537 2645 1.138661 TGCAGCTTGTTCTTTTTGGGG 59.861 47.619 0.00 0.00 0.00 4.96
2538 2646 2.600470 TGCAGCTTGTTCTTTTTGGG 57.400 45.000 0.00 0.00 0.00 4.12
2539 2647 4.448732 GGTTATGCAGCTTGTTCTTTTTGG 59.551 41.667 0.00 0.00 0.00 3.28
2540 2648 5.291971 AGGTTATGCAGCTTGTTCTTTTTG 58.708 37.500 0.00 0.00 0.00 2.44
2541 2649 5.302823 AGAGGTTATGCAGCTTGTTCTTTTT 59.697 36.000 0.00 0.00 31.44 1.94
2542 2650 4.829492 AGAGGTTATGCAGCTTGTTCTTTT 59.171 37.500 0.00 0.00 31.44 2.27
2543 2651 4.401925 AGAGGTTATGCAGCTTGTTCTTT 58.598 39.130 0.00 0.00 31.44 2.52
2544 2652 4.006319 GAGAGGTTATGCAGCTTGTTCTT 58.994 43.478 0.00 0.00 31.44 2.52
2545 2653 3.604582 GAGAGGTTATGCAGCTTGTTCT 58.395 45.455 0.00 0.00 31.44 3.01
2546 2654 2.680339 GGAGAGGTTATGCAGCTTGTTC 59.320 50.000 0.00 0.00 31.44 3.18
2547 2655 2.040278 TGGAGAGGTTATGCAGCTTGTT 59.960 45.455 0.00 0.00 31.44 2.83
2548 2656 1.630369 TGGAGAGGTTATGCAGCTTGT 59.370 47.619 0.00 0.00 31.44 3.16
2549 2657 2.408271 TGGAGAGGTTATGCAGCTTG 57.592 50.000 0.00 0.00 31.44 4.01
2550 2658 2.484417 CGATGGAGAGGTTATGCAGCTT 60.484 50.000 0.00 0.00 31.44 3.74
2551 2659 1.069823 CGATGGAGAGGTTATGCAGCT 59.930 52.381 0.00 0.00 35.23 4.24
2552 2660 1.506493 CGATGGAGAGGTTATGCAGC 58.494 55.000 0.00 0.00 0.00 5.25
2553 2661 1.202568 TGCGATGGAGAGGTTATGCAG 60.203 52.381 0.00 0.00 0.00 4.41
2554 2662 0.829990 TGCGATGGAGAGGTTATGCA 59.170 50.000 0.00 0.00 0.00 3.96
2555 2663 1.221414 GTGCGATGGAGAGGTTATGC 58.779 55.000 0.00 0.00 0.00 3.14
2556 2664 2.205074 GTGTGCGATGGAGAGGTTATG 58.795 52.381 0.00 0.00 0.00 1.90
2557 2665 1.831106 TGTGTGCGATGGAGAGGTTAT 59.169 47.619 0.00 0.00 0.00 1.89
2558 2666 1.262417 TGTGTGCGATGGAGAGGTTA 58.738 50.000 0.00 0.00 0.00 2.85
2559 2667 0.396435 TTGTGTGCGATGGAGAGGTT 59.604 50.000 0.00 0.00 0.00 3.50
2560 2668 0.036952 CTTGTGTGCGATGGAGAGGT 60.037 55.000 0.00 0.00 0.00 3.85
2561 2669 0.247460 TCTTGTGTGCGATGGAGAGG 59.753 55.000 0.00 0.00 0.00 3.69
2562 2670 1.728971 GTTCTTGTGTGCGATGGAGAG 59.271 52.381 0.00 0.00 0.00 3.20
2563 2671 1.069978 TGTTCTTGTGTGCGATGGAGA 59.930 47.619 0.00 0.00 0.00 3.71
2564 2672 1.511850 TGTTCTTGTGTGCGATGGAG 58.488 50.000 0.00 0.00 0.00 3.86
2565 2673 1.872952 CTTGTTCTTGTGTGCGATGGA 59.127 47.619 0.00 0.00 0.00 3.41
2566 2674 1.872952 TCTTGTTCTTGTGTGCGATGG 59.127 47.619 0.00 0.00 0.00 3.51
2567 2675 3.548587 CTTCTTGTTCTTGTGTGCGATG 58.451 45.455 0.00 0.00 0.00 3.84
2568 2676 2.031682 GCTTCTTGTTCTTGTGTGCGAT 60.032 45.455 0.00 0.00 0.00 4.58
2569 2677 1.330521 GCTTCTTGTTCTTGTGTGCGA 59.669 47.619 0.00 0.00 0.00 5.10
2570 2678 1.063912 TGCTTCTTGTTCTTGTGTGCG 59.936 47.619 0.00 0.00 0.00 5.34
2571 2679 2.849880 TGCTTCTTGTTCTTGTGTGC 57.150 45.000 0.00 0.00 0.00 4.57
2572 2680 4.324402 GTGTTTGCTTCTTGTTCTTGTGTG 59.676 41.667 0.00 0.00 0.00 3.82
2573 2681 4.485163 GTGTTTGCTTCTTGTTCTTGTGT 58.515 39.130 0.00 0.00 0.00 3.72
2574 2682 3.543494 CGTGTTTGCTTCTTGTTCTTGTG 59.457 43.478 0.00 0.00 0.00 3.33
2575 2683 3.427503 CCGTGTTTGCTTCTTGTTCTTGT 60.428 43.478 0.00 0.00 0.00 3.16
2576 2684 3.108144 CCGTGTTTGCTTCTTGTTCTTG 58.892 45.455 0.00 0.00 0.00 3.02
2577 2685 2.479560 GCCGTGTTTGCTTCTTGTTCTT 60.480 45.455 0.00 0.00 0.00 2.52
2578 2686 1.065551 GCCGTGTTTGCTTCTTGTTCT 59.934 47.619 0.00 0.00 0.00 3.01
2579 2687 1.477105 GCCGTGTTTGCTTCTTGTTC 58.523 50.000 0.00 0.00 0.00 3.18
2580 2688 0.248458 CGCCGTGTTTGCTTCTTGTT 60.248 50.000 0.00 0.00 0.00 2.83
2581 2689 1.355210 CGCCGTGTTTGCTTCTTGT 59.645 52.632 0.00 0.00 0.00 3.16
2582 2690 1.370414 CCGCCGTGTTTGCTTCTTG 60.370 57.895 0.00 0.00 0.00 3.02
2583 2691 2.551912 CCCGCCGTGTTTGCTTCTT 61.552 57.895 0.00 0.00 0.00 2.52
2584 2692 2.978010 CCCGCCGTGTTTGCTTCT 60.978 61.111 0.00 0.00 0.00 2.85
2585 2693 4.038080 CCCCGCCGTGTTTGCTTC 62.038 66.667 0.00 0.00 0.00 3.86
2586 2694 3.860930 ATCCCCGCCGTGTTTGCTT 62.861 57.895 0.00 0.00 0.00 3.91
2587 2695 3.860930 AATCCCCGCCGTGTTTGCT 62.861 57.895 0.00 0.00 0.00 3.91
2588 2696 3.336715 GAATCCCCGCCGTGTTTGC 62.337 63.158 0.00 0.00 0.00 3.68
2589 2697 2.696759 GGAATCCCCGCCGTGTTTG 61.697 63.158 0.00 0.00 0.00 2.93
2590 2698 2.360726 GGAATCCCCGCCGTGTTT 60.361 61.111 0.00 0.00 0.00 2.83
2606 2714 1.065491 TCACCTGGAAATCCATGTCGG 60.065 52.381 7.33 5.79 46.46 4.79
2607 2715 2.093500 TCTCACCTGGAAATCCATGTCG 60.093 50.000 7.33 4.79 46.46 4.35
2608 2716 3.198635 TCTCTCACCTGGAAATCCATGTC 59.801 47.826 7.33 0.00 46.46 3.06
2609 2717 3.054802 GTCTCTCACCTGGAAATCCATGT 60.055 47.826 0.00 3.50 46.46 3.21
2610 2718 3.539604 GTCTCTCACCTGGAAATCCATG 58.460 50.000 0.00 2.82 46.46 3.66
2611 2719 2.507471 GGTCTCTCACCTGGAAATCCAT 59.493 50.000 0.00 0.00 46.46 3.41
2612 2720 1.909302 GGTCTCTCACCTGGAAATCCA 59.091 52.381 0.00 1.53 42.84 3.41
2613 2721 2.700722 GGTCTCTCACCTGGAAATCC 57.299 55.000 0.00 0.00 42.84 3.01
2630 2738 1.128188 AGAAGTTTGGCCGGAGAGGT 61.128 55.000 5.05 0.00 43.70 3.85
2631 2739 0.391793 GAGAAGTTTGGCCGGAGAGG 60.392 60.000 5.05 0.00 44.97 3.69
2632 2740 0.610687 AGAGAAGTTTGGCCGGAGAG 59.389 55.000 5.05 0.00 0.00 3.20
2633 2741 0.321671 CAGAGAAGTTTGGCCGGAGA 59.678 55.000 5.05 0.00 0.00 3.71
2634 2742 1.301677 GCAGAGAAGTTTGGCCGGAG 61.302 60.000 5.05 0.00 0.00 4.63
2635 2743 1.302511 GCAGAGAAGTTTGGCCGGA 60.303 57.895 5.05 0.00 0.00 5.14
2636 2744 2.680913 CGCAGAGAAGTTTGGCCGG 61.681 63.158 0.00 0.00 0.00 6.13
2637 2745 1.901650 GACGCAGAGAAGTTTGGCCG 61.902 60.000 0.00 0.00 0.00 6.13
2638 2746 1.578206 GGACGCAGAGAAGTTTGGCC 61.578 60.000 0.00 0.00 0.00 5.36
2639 2747 1.578206 GGGACGCAGAGAAGTTTGGC 61.578 60.000 0.00 0.00 0.00 4.52
2640 2748 0.035458 AGGGACGCAGAGAAGTTTGG 59.965 55.000 0.00 0.00 0.00 3.28
2641 2749 1.884235 AAGGGACGCAGAGAAGTTTG 58.116 50.000 0.00 0.00 0.00 2.93
2642 2750 2.158813 TGAAAGGGACGCAGAGAAGTTT 60.159 45.455 0.00 0.00 0.00 2.66
2643 2751 1.416401 TGAAAGGGACGCAGAGAAGTT 59.584 47.619 0.00 0.00 0.00 2.66
2644 2752 1.048601 TGAAAGGGACGCAGAGAAGT 58.951 50.000 0.00 0.00 0.00 3.01
2645 2753 1.001406 AGTGAAAGGGACGCAGAGAAG 59.999 52.381 0.00 0.00 0.00 2.85
2646 2754 1.048601 AGTGAAAGGGACGCAGAGAA 58.951 50.000 0.00 0.00 0.00 2.87
2647 2755 1.919240 TAGTGAAAGGGACGCAGAGA 58.081 50.000 0.00 0.00 0.00 3.10
2648 2756 2.338500 GTTAGTGAAAGGGACGCAGAG 58.662 52.381 0.00 0.00 0.00 3.35
2649 2757 1.336517 CGTTAGTGAAAGGGACGCAGA 60.337 52.381 0.00 0.00 0.00 4.26
2650 2758 1.068474 CGTTAGTGAAAGGGACGCAG 58.932 55.000 0.00 0.00 0.00 5.18
2651 2759 3.204505 CGTTAGTGAAAGGGACGCA 57.795 52.632 0.00 0.00 0.00 5.24
2653 2761 1.347320 GAGCGTTAGTGAAAGGGACG 58.653 55.000 0.00 0.00 36.85 4.79
2654 2762 1.275573 AGGAGCGTTAGTGAAAGGGAC 59.724 52.381 0.00 0.00 0.00 4.46
2655 2763 1.549170 GAGGAGCGTTAGTGAAAGGGA 59.451 52.381 0.00 0.00 0.00 4.20
2656 2764 1.405661 GGAGGAGCGTTAGTGAAAGGG 60.406 57.143 0.00 0.00 0.00 3.95
2657 2765 1.405661 GGGAGGAGCGTTAGTGAAAGG 60.406 57.143 0.00 0.00 0.00 3.11
2658 2766 1.275291 TGGGAGGAGCGTTAGTGAAAG 59.725 52.381 0.00 0.00 0.00 2.62
2659 2767 1.344065 TGGGAGGAGCGTTAGTGAAA 58.656 50.000 0.00 0.00 0.00 2.69
2660 2768 1.480954 GATGGGAGGAGCGTTAGTGAA 59.519 52.381 0.00 0.00 0.00 3.18
2661 2769 1.112113 GATGGGAGGAGCGTTAGTGA 58.888 55.000 0.00 0.00 0.00 3.41
2662 2770 1.115467 AGATGGGAGGAGCGTTAGTG 58.885 55.000 0.00 0.00 0.00 2.74
2663 2771 1.115467 CAGATGGGAGGAGCGTTAGT 58.885 55.000 0.00 0.00 0.00 2.24
2664 2772 1.115467 ACAGATGGGAGGAGCGTTAG 58.885 55.000 0.00 0.00 0.00 2.34
2665 2773 0.824109 CACAGATGGGAGGAGCGTTA 59.176 55.000 0.00 0.00 0.00 3.18
2666 2774 0.904865 TCACAGATGGGAGGAGCGTT 60.905 55.000 0.00 0.00 0.00 4.84
2667 2775 1.305297 TCACAGATGGGAGGAGCGT 60.305 57.895 0.00 0.00 0.00 5.07
2668 2776 1.039785 TCTCACAGATGGGAGGAGCG 61.040 60.000 12.04 0.00 45.43 5.03
2669 2777 1.198713 TTCTCACAGATGGGAGGAGC 58.801 55.000 12.04 0.00 45.43 4.70
2670 2778 2.568956 TGTTTCTCACAGATGGGAGGAG 59.431 50.000 12.04 0.43 45.43 3.69
2671 2779 2.619931 TGTTTCTCACAGATGGGAGGA 58.380 47.619 12.04 0.00 45.43 3.71
2681 2789 1.768275 TGAAGGGAGCTGTTTCTCACA 59.232 47.619 0.00 0.00 38.94 3.58
2682 2790 2.147150 GTGAAGGGAGCTGTTTCTCAC 58.853 52.381 0.00 0.00 36.77 3.51
2683 2791 1.072331 GGTGAAGGGAGCTGTTTCTCA 59.928 52.381 0.00 0.00 34.84 3.27
2684 2792 1.349357 AGGTGAAGGGAGCTGTTTCTC 59.651 52.381 0.00 0.00 0.00 2.87
2685 2793 1.439543 AGGTGAAGGGAGCTGTTTCT 58.560 50.000 0.00 0.00 0.00 2.52
2686 2794 2.155279 GAAGGTGAAGGGAGCTGTTTC 58.845 52.381 0.00 0.00 0.00 2.78
2687 2795 1.777272 AGAAGGTGAAGGGAGCTGTTT 59.223 47.619 0.00 0.00 0.00 2.83
2688 2796 1.439543 AGAAGGTGAAGGGAGCTGTT 58.560 50.000 0.00 0.00 0.00 3.16
2689 2797 1.349357 GAAGAAGGTGAAGGGAGCTGT 59.651 52.381 0.00 0.00 0.00 4.40
2690 2798 1.627834 AGAAGAAGGTGAAGGGAGCTG 59.372 52.381 0.00 0.00 0.00 4.24
2691 2799 1.905894 GAGAAGAAGGTGAAGGGAGCT 59.094 52.381 0.00 0.00 0.00 4.09
2692 2800 1.625818 TGAGAAGAAGGTGAAGGGAGC 59.374 52.381 0.00 0.00 0.00 4.70
2693 2801 2.354604 GCTGAGAAGAAGGTGAAGGGAG 60.355 54.545 0.00 0.00 0.00 4.30
2694 2802 1.625818 GCTGAGAAGAAGGTGAAGGGA 59.374 52.381 0.00 0.00 0.00 4.20
2695 2803 1.349026 TGCTGAGAAGAAGGTGAAGGG 59.651 52.381 0.00 0.00 0.00 3.95
2696 2804 2.847327 TGCTGAGAAGAAGGTGAAGG 57.153 50.000 0.00 0.00 0.00 3.46
2697 2805 3.933955 CAGATGCTGAGAAGAAGGTGAAG 59.066 47.826 0.00 0.00 32.44 3.02
2698 2806 3.867600 GCAGATGCTGAGAAGAAGGTGAA 60.868 47.826 0.00 0.00 38.21 3.18
2699 2807 2.354503 GCAGATGCTGAGAAGAAGGTGA 60.355 50.000 0.00 0.00 38.21 4.02
2700 2808 2.008329 GCAGATGCTGAGAAGAAGGTG 58.992 52.381 0.00 0.00 38.21 4.00
2701 2809 1.627329 TGCAGATGCTGAGAAGAAGGT 59.373 47.619 6.35 0.00 42.66 3.50
2702 2810 2.398252 TGCAGATGCTGAGAAGAAGG 57.602 50.000 6.35 0.00 42.66 3.46
2703 2811 3.532542 TCATGCAGATGCTGAGAAGAAG 58.467 45.455 6.35 0.00 42.66 2.85
2704 2812 3.622166 TCATGCAGATGCTGAGAAGAA 57.378 42.857 6.35 0.00 42.66 2.52
2705 2813 3.622166 TTCATGCAGATGCTGAGAAGA 57.378 42.857 6.35 0.00 42.66 2.87
2706 2814 4.082949 TGTTTTCATGCAGATGCTGAGAAG 60.083 41.667 6.35 0.00 42.66 2.85
2707 2815 3.822167 TGTTTTCATGCAGATGCTGAGAA 59.178 39.130 6.35 6.32 42.66 2.87
2708 2816 3.414269 TGTTTTCATGCAGATGCTGAGA 58.586 40.909 6.35 0.74 42.66 3.27
2709 2817 3.439129 TCTGTTTTCATGCAGATGCTGAG 59.561 43.478 6.35 0.00 42.66 3.35
2710 2818 3.414269 TCTGTTTTCATGCAGATGCTGA 58.586 40.909 6.35 4.84 42.66 4.26
2711 2819 3.427638 CCTCTGTTTTCATGCAGATGCTG 60.428 47.826 6.35 2.57 40.45 4.41
2712 2820 2.753452 CCTCTGTTTTCATGCAGATGCT 59.247 45.455 6.35 0.00 40.45 3.79
2713 2821 2.159282 CCCTCTGTTTTCATGCAGATGC 60.159 50.000 0.00 0.00 40.45 3.91
2714 2822 2.426024 CCCCTCTGTTTTCATGCAGATG 59.574 50.000 0.00 0.26 40.45 2.90
2715 2823 2.309755 TCCCCTCTGTTTTCATGCAGAT 59.690 45.455 0.00 0.00 40.45 2.90
2716 2824 1.704628 TCCCCTCTGTTTTCATGCAGA 59.295 47.619 0.00 1.52 39.17 4.26
2717 2825 2.205022 TCCCCTCTGTTTTCATGCAG 57.795 50.000 0.00 0.00 0.00 4.41
2718 2826 2.158475 ACTTCCCCTCTGTTTTCATGCA 60.158 45.455 0.00 0.00 0.00 3.96
2719 2827 2.519013 ACTTCCCCTCTGTTTTCATGC 58.481 47.619 0.00 0.00 0.00 4.06
2720 2828 5.316987 AGTAACTTCCCCTCTGTTTTCATG 58.683 41.667 0.00 0.00 0.00 3.07
2721 2829 5.584551 AGTAACTTCCCCTCTGTTTTCAT 57.415 39.130 0.00 0.00 0.00 2.57
2722 2830 5.367352 TGTAGTAACTTCCCCTCTGTTTTCA 59.633 40.000 0.00 0.00 0.00 2.69
2723 2831 5.699915 GTGTAGTAACTTCCCCTCTGTTTTC 59.300 44.000 0.00 0.00 0.00 2.29
2724 2832 5.455755 GGTGTAGTAACTTCCCCTCTGTTTT 60.456 44.000 0.00 0.00 0.00 2.43
2725 2833 4.041321 GGTGTAGTAACTTCCCCTCTGTTT 59.959 45.833 0.00 0.00 0.00 2.83
2726 2834 3.581770 GGTGTAGTAACTTCCCCTCTGTT 59.418 47.826 0.00 0.00 0.00 3.16
2727 2835 3.171528 GGTGTAGTAACTTCCCCTCTGT 58.828 50.000 0.00 0.00 0.00 3.41
2728 2836 3.442076 AGGTGTAGTAACTTCCCCTCTG 58.558 50.000 0.00 0.00 0.00 3.35
2729 2837 3.848978 AGGTGTAGTAACTTCCCCTCT 57.151 47.619 0.00 0.00 0.00 3.69
2730 2838 4.576879 CAAAGGTGTAGTAACTTCCCCTC 58.423 47.826 0.00 0.00 0.00 4.30
2731 2839 3.244805 GCAAAGGTGTAGTAACTTCCCCT 60.245 47.826 0.00 0.00 0.00 4.79
2732 2840 3.079578 GCAAAGGTGTAGTAACTTCCCC 58.920 50.000 0.00 0.00 0.00 4.81
2733 2841 3.746940 TGCAAAGGTGTAGTAACTTCCC 58.253 45.455 0.00 0.00 0.00 3.97
2734 2842 4.577283 TGTTGCAAAGGTGTAGTAACTTCC 59.423 41.667 0.00 0.00 0.00 3.46
2735 2843 5.744666 TGTTGCAAAGGTGTAGTAACTTC 57.255 39.130 0.00 0.00 0.00 3.01
2736 2844 6.518208 TTTGTTGCAAAGGTGTAGTAACTT 57.482 33.333 0.00 0.00 0.00 2.66
2737 2845 6.152154 ACTTTTGTTGCAAAGGTGTAGTAACT 59.848 34.615 0.00 0.00 0.00 2.24
2738 2846 6.327154 ACTTTTGTTGCAAAGGTGTAGTAAC 58.673 36.000 0.00 0.00 0.00 2.50
2739 2847 6.518208 ACTTTTGTTGCAAAGGTGTAGTAA 57.482 33.333 0.00 0.00 0.00 2.24
2740 2848 7.553402 TCTTACTTTTGTTGCAAAGGTGTAGTA 59.447 33.333 16.14 8.53 0.00 1.82
2741 2849 6.376018 TCTTACTTTTGTTGCAAAGGTGTAGT 59.624 34.615 16.14 9.30 0.00 2.73
2746 2854 5.872617 GGTTTCTTACTTTTGTTGCAAAGGT 59.127 36.000 0.00 12.60 0.00 3.50
2747 2855 5.872070 TGGTTTCTTACTTTTGTTGCAAAGG 59.128 36.000 0.00 2.83 0.00 3.11
2761 2869 6.513556 GCTCCTTTTCTGTTCTGGTTTCTTAC 60.514 42.308 0.00 0.00 0.00 2.34
2775 2883 1.467920 GACCCCATGCTCCTTTTCTG 58.532 55.000 0.00 0.00 0.00 3.02
2819 2927 7.288810 TGTAAAGGTTGATTTTGATCTTGCT 57.711 32.000 0.00 0.00 0.00 3.91
2835 2943 6.717289 TGCTGTAATTCCACTATGTAAAGGT 58.283 36.000 0.00 0.00 0.00 3.50
2947 3055 9.950680 ACTGTGAACATTTTACTGTAAATCTTG 57.049 29.630 13.29 12.99 0.00 3.02
3151 3259 4.691685 TGCAATGCCATGTTCTGAAAATTC 59.308 37.500 1.53 0.00 0.00 2.17
3163 3271 2.416296 CCTGTGTACTTGCAATGCCATG 60.416 50.000 1.53 0.00 0.00 3.66
3184 3292 7.340999 TGGAAGGGGCTTTTATAACTGAAATAC 59.659 37.037 0.00 0.00 0.00 1.89
3279 3387 8.484641 TCTGCTATTTCACTGTAAATCTTCTG 57.515 34.615 0.00 0.00 31.63 3.02
3282 3390 9.678260 ATCTTCTGCTATTTCACTGTAAATCTT 57.322 29.630 0.00 0.00 31.63 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.