Multiple sequence alignment - TraesCS1A01G387200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G387200 chr1A 100.000 2438 0 0 1 2438 555945601 555943164 0.000000e+00 4503
1 TraesCS1A01G387200 chr1A 98.394 1930 20 7 1 1922 556821428 556819502 0.000000e+00 3382
2 TraesCS1A01G387200 chr1A 98.487 1917 21 4 1 1910 556832661 556834576 0.000000e+00 3373
3 TraesCS1A01G387200 chr1A 98.121 1916 25 6 1 1909 553063907 553065818 0.000000e+00 3328
4 TraesCS1A01G387200 chr1A 93.780 1640 87 5 1 1628 8024117 8025753 0.000000e+00 2449
5 TraesCS1A01G387200 chr7A 98.487 1917 18 6 1 1910 589766295 589764383 0.000000e+00 3369
6 TraesCS1A01G387200 chr2A 97.106 1935 30 6 1 1910 766840942 766842875 0.000000e+00 3240
7 TraesCS1A01G387200 chr2A 93.351 1940 96 10 1 1910 3768639 3766703 0.000000e+00 2837
8 TraesCS1A01G387200 chr3D 96.589 1935 37 6 1 1911 104033652 104035581 0.000000e+00 3181
9 TraesCS1A01G387200 chr4A 92.894 1942 103 10 1 1911 16991353 16993290 0.000000e+00 2789
10 TraesCS1A01G387200 chr1B 92.614 352 24 2 1936 2287 639097845 639097496 2.800000e-139 505
11 TraesCS1A01G387200 chr1B 88.933 253 25 3 2186 2436 639230114 639229863 2.350000e-80 309
12 TraesCS1A01G387200 chr1B 93.496 123 7 1 2282 2403 639093916 639093794 5.350000e-42 182
13 TraesCS1A01G387200 chr2D 91.716 338 27 1 1574 1910 599804207 599803870 3.670000e-128 468
14 TraesCS1A01G387200 chr1D 85.276 326 38 8 1592 1910 442783014 442782692 6.500000e-86 327
15 TraesCS1A01G387200 chr5D 85.106 329 37 7 1592 1910 443248193 443248519 2.340000e-85 326


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G387200 chr1A 555943164 555945601 2437 True 4503.0 4503 100.000 1 2438 1 chr1A.!!$R1 2437
1 TraesCS1A01G387200 chr1A 556819502 556821428 1926 True 3382.0 3382 98.394 1 1922 1 chr1A.!!$R2 1921
2 TraesCS1A01G387200 chr1A 556832661 556834576 1915 False 3373.0 3373 98.487 1 1910 1 chr1A.!!$F3 1909
3 TraesCS1A01G387200 chr1A 553063907 553065818 1911 False 3328.0 3328 98.121 1 1909 1 chr1A.!!$F2 1908
4 TraesCS1A01G387200 chr1A 8024117 8025753 1636 False 2449.0 2449 93.780 1 1628 1 chr1A.!!$F1 1627
5 TraesCS1A01G387200 chr7A 589764383 589766295 1912 True 3369.0 3369 98.487 1 1910 1 chr7A.!!$R1 1909
6 TraesCS1A01G387200 chr2A 766840942 766842875 1933 False 3240.0 3240 97.106 1 1910 1 chr2A.!!$F1 1909
7 TraesCS1A01G387200 chr2A 3766703 3768639 1936 True 2837.0 2837 93.351 1 1910 1 chr2A.!!$R1 1909
8 TraesCS1A01G387200 chr3D 104033652 104035581 1929 False 3181.0 3181 96.589 1 1911 1 chr3D.!!$F1 1910
9 TraesCS1A01G387200 chr4A 16991353 16993290 1937 False 2789.0 2789 92.894 1 1911 1 chr4A.!!$F1 1910
10 TraesCS1A01G387200 chr1B 639093794 639097845 4051 True 343.5 505 93.055 1936 2403 2 chr1B.!!$R2 467

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1048 1063 3.066064 ACGCAAATGTTGTGCTAAGTTCA 59.934 39.13 1.57 0.0 44.75 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2416 6042 0.109342 AACACACTCTGCAAGGGGAG 59.891 55.0 0.0 0.0 40.48 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1048 1063 3.066064 ACGCAAATGTTGTGCTAAGTTCA 59.934 39.130 1.57 0.00 44.75 3.18
1514 1536 2.028020 AGAAATGAGTCCGGGTGAAGAC 60.028 50.000 0.00 0.00 0.00 3.01
1523 1545 0.875059 CGGGTGAAGACTTTTGGAGC 59.125 55.000 0.00 0.00 0.00 4.70
1628 1650 5.940470 AGATCTAAGTAGCAACCTGTTTTGG 59.060 40.000 0.00 0.00 0.00 3.28
1862 1902 0.404426 GGAGTAAACACAAGGGCCCT 59.596 55.000 22.28 22.28 0.00 5.19
1929 1970 4.814294 CAGCCCGCCGTACACCTC 62.814 72.222 0.00 0.00 0.00 3.85
1932 1973 3.687102 CCCGCCGTACACCTCACA 61.687 66.667 0.00 0.00 0.00 3.58
1933 1974 2.431942 CCGCCGTACACCTCACAC 60.432 66.667 0.00 0.00 0.00 3.82
1934 1975 2.337170 CGCCGTACACCTCACACA 59.663 61.111 0.00 0.00 0.00 3.72
2001 2042 9.743057 TTTTCACATTTGTAAACTTGGTATGAG 57.257 29.630 0.00 0.00 0.00 2.90
2022 2063 3.818773 AGGTCCACTAAACAACGATTTGG 59.181 43.478 0.00 0.00 37.00 3.28
2039 2080 4.377839 TTTGGAAATGTTGTTCTCGCAA 57.622 36.364 0.00 0.00 0.00 4.85
2054 2095 7.349711 TGTTCTCGCAATAAGTTTCAGTTTAC 58.650 34.615 0.00 0.00 0.00 2.01
2060 2101 7.658575 TCGCAATAAGTTTCAGTTTACTAACCT 59.341 33.333 0.00 0.00 34.71 3.50
2085 2126 7.231467 TGACCTCATATTTAATTAAGGGGAGC 58.769 38.462 7.84 1.75 0.00 4.70
2105 2146 2.809299 GCTTTCTACGGGACTTGTTGGT 60.809 50.000 0.00 0.00 0.00 3.67
2114 2155 1.808945 GGACTTGTTGGTGATGCTCTG 59.191 52.381 0.00 0.00 0.00 3.35
2120 2161 2.028658 TGTTGGTGATGCTCTGAGACTC 60.029 50.000 9.28 4.51 0.00 3.36
2122 2163 2.533916 TGGTGATGCTCTGAGACTCTT 58.466 47.619 9.28 0.00 0.00 2.85
2151 2192 6.067263 ACTCAAATGAAATTTTCGGTTCGA 57.933 33.333 4.76 0.00 46.10 3.71
2176 2217 1.761174 GTTGGAGGCTGGGAGTTCA 59.239 57.895 0.00 0.00 0.00 3.18
2178 2219 1.075601 TTGGAGGCTGGGAGTTCATT 58.924 50.000 0.00 0.00 0.00 2.57
2181 2222 2.647299 TGGAGGCTGGGAGTTCATTTTA 59.353 45.455 0.00 0.00 0.00 1.52
2229 2270 0.494551 TCTTTCCCACACCCCTCCTA 59.505 55.000 0.00 0.00 0.00 2.94
2237 2278 2.355818 CCACACCCCTCCTAAAAGTAGC 60.356 54.545 0.00 0.00 0.00 3.58
2242 2283 2.172930 CCCCTCCTAAAAGTAGCCCTTC 59.827 54.545 0.00 0.00 31.27 3.46
2272 2313 3.544684 TGTCATCACATATGGCACTTCC 58.455 45.455 7.80 0.00 0.00 3.46
2276 2317 3.266510 TCACATATGGCACTTCCTGAC 57.733 47.619 7.80 0.00 35.26 3.51
2277 2318 2.571202 TCACATATGGCACTTCCTGACA 59.429 45.455 7.80 0.00 44.39 3.58
2279 2320 2.092753 ACATATGGCACTTCCTGACAGG 60.093 50.000 15.99 15.99 43.09 4.00
2280 2321 1.656587 TATGGCACTTCCTGACAGGT 58.343 50.000 21.06 0.00 43.09 4.00
2281 2322 0.326264 ATGGCACTTCCTGACAGGTC 59.674 55.000 21.06 6.64 43.09 3.85
2282 2323 0.764369 TGGCACTTCCTGACAGGTCT 60.764 55.000 21.06 2.14 30.27 3.85
2286 5912 0.545548 ACTTCCTGACAGGTCTCCCC 60.546 60.000 21.06 0.00 36.53 4.81
2306 5932 4.389374 CCCAGAGTACAAGTTGTTCATGT 58.611 43.478 14.90 0.00 0.00 3.21
2346 5972 2.096980 CGTGATACTAGTCTGCGGTTGA 59.903 50.000 0.00 0.00 0.00 3.18
2356 5982 2.244436 CTGCGGTTGATGCTTGTCCG 62.244 60.000 0.00 0.00 43.37 4.79
2363 5989 3.426159 GGTTGATGCTTGTCCGTATTGTG 60.426 47.826 0.00 0.00 0.00 3.33
2368 5994 3.331150 TGCTTGTCCGTATTGTGTTAGG 58.669 45.455 0.00 0.00 0.00 2.69
2395 6021 3.091545 ACATGAATGGTTTCAAGCCGAT 58.908 40.909 0.00 0.00 44.70 4.18
2399 6025 5.913137 TGAATGGTTTCAAGCCGATAAAT 57.087 34.783 0.00 0.00 38.90 1.40
2403 6029 4.277476 TGGTTTCAAGCCGATAAATCCAT 58.723 39.130 0.00 0.00 0.00 3.41
2404 6030 4.709397 TGGTTTCAAGCCGATAAATCCATT 59.291 37.500 0.00 0.00 0.00 3.16
2405 6031 5.186797 TGGTTTCAAGCCGATAAATCCATTT 59.813 36.000 0.00 0.00 0.00 2.32
2406 6032 5.519927 GGTTTCAAGCCGATAAATCCATTTG 59.480 40.000 0.00 0.00 0.00 2.32
2407 6033 5.913137 TTCAAGCCGATAAATCCATTTGT 57.087 34.783 0.00 0.00 0.00 2.83
2408 6034 5.913137 TCAAGCCGATAAATCCATTTGTT 57.087 34.783 0.00 0.00 0.00 2.83
2409 6035 5.649557 TCAAGCCGATAAATCCATTTGTTG 58.350 37.500 0.00 0.00 0.00 3.33
2410 6036 5.184864 TCAAGCCGATAAATCCATTTGTTGT 59.815 36.000 0.00 0.00 0.00 3.32
2411 6037 4.997565 AGCCGATAAATCCATTTGTTGTG 58.002 39.130 0.00 0.00 0.00 3.33
2412 6038 3.551485 GCCGATAAATCCATTTGTTGTGC 59.449 43.478 0.00 0.00 0.00 4.57
2413 6039 4.677779 GCCGATAAATCCATTTGTTGTGCT 60.678 41.667 0.00 0.00 0.00 4.40
2414 6040 5.036737 CCGATAAATCCATTTGTTGTGCTC 58.963 41.667 0.00 0.00 0.00 4.26
2415 6041 5.036737 CGATAAATCCATTTGTTGTGCTCC 58.963 41.667 0.00 0.00 0.00 4.70
2416 6042 3.683365 AAATCCATTTGTTGTGCTCCC 57.317 42.857 0.00 0.00 0.00 4.30
2417 6043 2.610438 ATCCATTTGTTGTGCTCCCT 57.390 45.000 0.00 0.00 0.00 4.20
2418 6044 1.909700 TCCATTTGTTGTGCTCCCTC 58.090 50.000 0.00 0.00 0.00 4.30
2419 6045 0.890683 CCATTTGTTGTGCTCCCTCC 59.109 55.000 0.00 0.00 0.00 4.30
2420 6046 0.890683 CATTTGTTGTGCTCCCTCCC 59.109 55.000 0.00 0.00 0.00 4.30
2421 6047 0.251787 ATTTGTTGTGCTCCCTCCCC 60.252 55.000 0.00 0.00 0.00 4.81
2422 6048 1.360393 TTTGTTGTGCTCCCTCCCCT 61.360 55.000 0.00 0.00 0.00 4.79
2423 6049 1.360393 TTGTTGTGCTCCCTCCCCTT 61.360 55.000 0.00 0.00 0.00 3.95
2424 6050 1.303643 GTTGTGCTCCCTCCCCTTG 60.304 63.158 0.00 0.00 0.00 3.61
2425 6051 3.210012 TTGTGCTCCCTCCCCTTGC 62.210 63.158 0.00 0.00 0.00 4.01
2426 6052 3.650950 GTGCTCCCTCCCCTTGCA 61.651 66.667 0.00 0.00 0.00 4.08
2427 6053 3.333219 TGCTCCCTCCCCTTGCAG 61.333 66.667 0.00 0.00 0.00 4.41
2428 6054 3.011517 GCTCCCTCCCCTTGCAGA 61.012 66.667 0.00 0.00 0.00 4.26
2429 6055 3.041469 GCTCCCTCCCCTTGCAGAG 62.041 68.421 0.00 0.00 0.00 3.35
2430 6056 1.614824 CTCCCTCCCCTTGCAGAGT 60.615 63.158 0.61 0.00 0.00 3.24
2431 6057 1.908340 CTCCCTCCCCTTGCAGAGTG 61.908 65.000 0.61 0.00 0.00 3.51
2432 6058 2.227036 CCCTCCCCTTGCAGAGTGT 61.227 63.158 0.61 0.00 0.00 3.55
2433 6059 1.002868 CCTCCCCTTGCAGAGTGTG 60.003 63.158 0.61 0.00 0.00 3.82
2434 6060 1.757306 CTCCCCTTGCAGAGTGTGT 59.243 57.895 0.00 0.00 0.00 3.72
2435 6061 0.109342 CTCCCCTTGCAGAGTGTGTT 59.891 55.000 0.00 0.00 0.00 3.32
2436 6062 0.550914 TCCCCTTGCAGAGTGTGTTT 59.449 50.000 0.00 0.00 0.00 2.83
2437 6063 0.954452 CCCCTTGCAGAGTGTGTTTC 59.046 55.000 0.00 0.00 0.00 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
442 448 0.815734 GATTCGACTCTCCCACCGAA 59.184 55.000 0.00 0.00 43.69 4.30
1361 1377 6.817641 TGCATCAACATTTATTTCATCCAACC 59.182 34.615 0.00 0.00 0.00 3.77
1514 1536 2.669391 GCCATGTTCTTCGCTCCAAAAG 60.669 50.000 0.00 0.00 0.00 2.27
1523 1545 1.135024 CCCAATTGGCCATGTTCTTCG 60.135 52.381 19.75 0.00 0.00 3.79
1628 1650 7.837163 TGCCCTGCAAAACAAAAATTGTTGC 62.837 40.000 8.34 10.24 43.34 4.17
1839 1879 2.035449 GGCCCTTGTGTTTACTCCAAAC 59.965 50.000 0.00 0.00 45.72 2.93
1862 1902 2.170166 CAGGGGCAAGACAGCAATAAA 58.830 47.619 0.00 0.00 35.83 1.40
1912 1953 4.814294 GAGGTGTACGGCGGGCTG 62.814 72.222 13.24 0.00 0.00 4.85
1916 1957 2.431942 GTGTGAGGTGTACGGCGG 60.432 66.667 13.24 0.00 0.00 6.13
1918 1959 1.666872 GGTGTGTGAGGTGTACGGC 60.667 63.158 0.00 0.00 0.00 5.68
1919 1960 0.320374 ATGGTGTGTGAGGTGTACGG 59.680 55.000 0.00 0.00 0.00 4.02
1920 1961 3.186909 CATATGGTGTGTGAGGTGTACG 58.813 50.000 0.00 0.00 0.00 3.67
1921 1962 2.936498 GCATATGGTGTGTGAGGTGTAC 59.064 50.000 4.56 0.00 0.00 2.90
1922 1963 2.837591 AGCATATGGTGTGTGAGGTGTA 59.162 45.455 6.62 0.00 0.00 2.90
1923 1964 1.630369 AGCATATGGTGTGTGAGGTGT 59.370 47.619 6.62 0.00 0.00 4.16
1924 1965 2.283298 GAGCATATGGTGTGTGAGGTG 58.717 52.381 13.10 0.00 0.00 4.00
1925 1966 1.134699 CGAGCATATGGTGTGTGAGGT 60.135 52.381 13.10 0.00 0.00 3.85
1926 1967 1.136891 TCGAGCATATGGTGTGTGAGG 59.863 52.381 13.10 0.00 0.00 3.86
1927 1968 2.196749 GTCGAGCATATGGTGTGTGAG 58.803 52.381 13.10 0.00 0.00 3.51
1928 1969 1.548269 TGTCGAGCATATGGTGTGTGA 59.452 47.619 13.10 2.10 0.00 3.58
1929 1970 2.008752 TGTCGAGCATATGGTGTGTG 57.991 50.000 13.10 0.00 0.00 3.82
1930 1971 2.760634 TTGTCGAGCATATGGTGTGT 57.239 45.000 13.10 0.00 0.00 3.72
1931 1972 4.142622 ACATTTTGTCGAGCATATGGTGTG 60.143 41.667 13.10 4.79 0.00 3.82
1932 1973 4.009675 ACATTTTGTCGAGCATATGGTGT 58.990 39.130 13.10 0.00 0.00 4.16
1933 1974 4.621068 ACATTTTGTCGAGCATATGGTG 57.379 40.909 13.10 5.16 0.00 4.17
1934 1975 5.182950 TCAAACATTTTGTCGAGCATATGGT 59.817 36.000 7.23 7.23 0.00 3.55
1980 2021 6.433093 GGACCTCATACCAAGTTTACAAATGT 59.567 38.462 0.00 0.00 0.00 2.71
1992 2033 5.310451 GTTGTTTAGTGGACCTCATACCAA 58.690 41.667 0.00 0.00 37.94 3.67
1997 2038 4.553330 ATCGTTGTTTAGTGGACCTCAT 57.447 40.909 0.00 0.00 0.00 2.90
2001 2042 3.816523 TCCAAATCGTTGTTTAGTGGACC 59.183 43.478 0.00 0.00 32.40 4.46
2022 2063 7.378461 TGAAACTTATTGCGAGAACAACATTTC 59.622 33.333 0.00 0.00 31.03 2.17
2039 2080 8.657712 AGGTCAGGTTAGTAAACTGAAACTTAT 58.342 33.333 28.08 10.83 35.81 1.73
2060 2101 7.073725 AGCTCCCCTTAATTAAATATGAGGTCA 59.926 37.037 0.00 0.00 0.00 4.02
2085 2126 2.806244 CACCAACAAGTCCCGTAGAAAG 59.194 50.000 0.00 0.00 0.00 2.62
2105 2146 4.879197 TTTGAAGAGTCTCAGAGCATCA 57.121 40.909 1.94 0.00 37.82 3.07
2122 2163 9.757227 AACCGAAAATTTCATTTGAGTATTTGA 57.243 25.926 6.53 0.00 31.77 2.69
2151 2192 2.281761 CAGCCTCCAACCTTGCGT 60.282 61.111 0.00 0.00 0.00 5.24
2181 2222 9.270640 CTTCACTTGCTTGAGATAATTAGCTAT 57.729 33.333 2.60 0.00 34.77 2.97
2202 2243 1.947456 GGTGTGGGAAAGACACTTCAC 59.053 52.381 0.00 0.00 42.83 3.18
2229 2270 2.028020 CGACTCCAGAAGGGCTACTTTT 60.028 50.000 0.00 0.00 40.21 2.27
2237 2278 0.898320 ATGACACGACTCCAGAAGGG 59.102 55.000 0.00 0.00 34.83 3.95
2279 2320 2.633481 ACAACTTGTACTCTGGGGAGAC 59.367 50.000 0.00 0.00 41.86 3.36
2280 2321 2.972348 ACAACTTGTACTCTGGGGAGA 58.028 47.619 0.00 0.00 41.86 3.71
2281 2322 3.071023 TGAACAACTTGTACTCTGGGGAG 59.929 47.826 0.00 0.00 44.62 4.30
2282 2323 3.042682 TGAACAACTTGTACTCTGGGGA 58.957 45.455 0.00 0.00 0.00 4.81
2286 5912 6.587990 CCTCTACATGAACAACTTGTACTCTG 59.412 42.308 0.00 0.00 37.85 3.35
2306 5932 2.370849 ACGGCAAGGAGAAAAACCTCTA 59.629 45.455 0.00 0.00 36.67 2.43
2346 5972 3.938963 CCTAACACAATACGGACAAGCAT 59.061 43.478 0.00 0.00 0.00 3.79
2356 5982 6.795098 TCATGTCACAACCTAACACAATAC 57.205 37.500 0.00 0.00 0.00 1.89
2363 5989 5.705609 AACCATTCATGTCACAACCTAAC 57.294 39.130 0.00 0.00 0.00 2.34
2368 5994 4.445385 GCTTGAAACCATTCATGTCACAAC 59.555 41.667 0.00 0.00 44.70 3.32
2395 6021 4.415596 AGGGAGCACAACAAATGGATTTA 58.584 39.130 0.00 0.00 0.00 1.40
2399 6025 1.547675 GGAGGGAGCACAACAAATGGA 60.548 52.381 0.00 0.00 0.00 3.41
2403 6029 1.152830 GGGGAGGGAGCACAACAAA 59.847 57.895 0.00 0.00 0.00 2.83
2404 6030 1.360393 AAGGGGAGGGAGCACAACAA 61.360 55.000 0.00 0.00 0.00 2.83
2405 6031 1.774217 AAGGGGAGGGAGCACAACA 60.774 57.895 0.00 0.00 0.00 3.33
2406 6032 1.303643 CAAGGGGAGGGAGCACAAC 60.304 63.158 0.00 0.00 0.00 3.32
2407 6033 3.170362 CAAGGGGAGGGAGCACAA 58.830 61.111 0.00 0.00 0.00 3.33
2408 6034 3.650950 GCAAGGGGAGGGAGCACA 61.651 66.667 0.00 0.00 0.00 4.57
2409 6035 3.635268 CTGCAAGGGGAGGGAGCAC 62.635 68.421 0.00 0.00 0.00 4.40
2410 6036 3.333219 CTGCAAGGGGAGGGAGCA 61.333 66.667 0.00 0.00 0.00 4.26
2411 6037 3.011517 TCTGCAAGGGGAGGGAGC 61.012 66.667 0.00 0.00 32.55 4.70
2412 6038 1.614824 ACTCTGCAAGGGGAGGGAG 60.615 63.158 5.76 0.32 40.48 4.30
2413 6039 1.920325 CACTCTGCAAGGGGAGGGA 60.920 63.158 5.76 0.00 40.48 4.20
2414 6040 2.227036 ACACTCTGCAAGGGGAGGG 61.227 63.158 1.58 1.58 40.48 4.30
2415 6041 1.002868 CACACTCTGCAAGGGGAGG 60.003 63.158 5.76 0.00 40.48 4.30
2416 6042 0.109342 AACACACTCTGCAAGGGGAG 59.891 55.000 0.00 0.00 40.48 4.30
2417 6043 0.550914 AAACACACTCTGCAAGGGGA 59.449 50.000 3.70 0.00 40.48 4.81
2418 6044 0.954452 GAAACACACTCTGCAAGGGG 59.046 55.000 3.70 0.00 40.48 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.