Multiple sequence alignment - TraesCS1A01G379000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G379000 chr1A 100.000 4320 0 0 935 5254 551323790 551319471 0.000000e+00 7978.0
1 TraesCS1A01G379000 chr1A 100.000 672 0 0 1 672 551324724 551324053 0.000000e+00 1242.0
2 TraesCS1A01G379000 chr1A 77.604 384 64 18 4880 5254 497340271 497339901 4.120000e-51 213.0
3 TraesCS1A01G379000 chr1B 93.594 2732 111 30 2104 4790 630833862 630831150 0.000000e+00 4017.0
4 TraesCS1A01G379000 chr1B 94.045 806 36 8 1006 1800 630835028 630834224 0.000000e+00 1212.0
5 TraesCS1A01G379000 chr1B 88.235 221 10 4 453 672 630835699 630835494 3.140000e-62 250.0
6 TraesCS1A01G379000 chr1B 98.837 86 1 0 2021 2106 4616692 4616777 2.530000e-33 154.0
7 TraesCS1A01G379000 chr1D 93.574 2739 100 34 2104 4790 458889664 458886950 0.000000e+00 4013.0
8 TraesCS1A01G379000 chr1D 92.780 1025 46 16 1024 2024 458890681 458889661 0.000000e+00 1458.0
9 TraesCS1A01G379000 chr1D 90.776 477 32 10 201 672 458891465 458890996 1.240000e-175 627.0
10 TraesCS1A01G379000 chr1D 80.672 357 54 10 4902 5252 471835744 471835397 4.040000e-66 263.0
11 TraesCS1A01G379000 chr1D 78.820 373 70 9 4887 5252 376240188 376239818 5.260000e-60 243.0
12 TraesCS1A01G379000 chr1D 78.370 319 58 11 4879 5192 62433986 62434298 4.150000e-46 196.0
13 TraesCS1A01G379000 chr2D 84.699 1013 116 22 1013 1995 500267640 500268643 0.000000e+00 976.0
14 TraesCS1A01G379000 chr2D 86.007 293 24 10 1589 1875 648847580 648847861 1.110000e-76 298.0
15 TraesCS1A01G379000 chr2D 86.628 172 16 5 1854 2023 16556900 16556734 3.230000e-42 183.0
16 TraesCS1A01G379000 chr2D 92.381 105 7 1 2003 2107 419467285 419467182 1.180000e-31 148.0
17 TraesCS1A01G379000 chr2D 90.826 109 9 1 2104 2212 16556736 16556629 1.520000e-30 145.0
18 TraesCS1A01G379000 chr2D 87.037 54 3 4 244 295 369236965 369236914 2.040000e-04 58.4
19 TraesCS1A01G379000 chr2D 96.875 32 1 0 244 275 369236942 369236911 3.000000e-03 54.7
20 TraesCS1A01G379000 chr3B 83.099 639 90 16 3220 3849 477885878 477885249 2.750000e-157 566.0
21 TraesCS1A01G379000 chr3B 85.383 431 47 9 1600 2025 183642557 183642976 2.910000e-117 433.0
22 TraesCS1A01G379000 chr3B 80.488 574 80 27 2527 3083 477886569 477886011 1.360000e-110 411.0
23 TraesCS1A01G379000 chr3B 87.791 172 14 5 1854 2023 787977720 787977554 1.490000e-45 195.0
24 TraesCS1A01G379000 chr3B 91.509 106 8 1 2104 2209 183642972 183643076 1.520000e-30 145.0
25 TraesCS1A01G379000 chr3D 82.803 628 94 11 3220 3840 366454356 366453736 2.770000e-152 549.0
26 TraesCS1A01G379000 chr3D 80.662 574 79 28 2527 3083 366455047 366454489 2.930000e-112 416.0
27 TraesCS1A01G379000 chr3A 82.602 638 93 16 3220 3848 488722588 488721960 9.950000e-152 547.0
28 TraesCS1A01G379000 chr3A 80.594 572 83 26 2527 3083 488723279 488722721 2.930000e-112 416.0
29 TraesCS1A01G379000 chr6B 88.073 327 33 5 1505 1826 714479 714804 2.970000e-102 383.0
30 TraesCS1A01G379000 chr6B 86.348 293 26 9 1589 1875 711530149 711529865 1.840000e-79 307.0
31 TraesCS1A01G379000 chr6B 93.636 110 5 2 2104 2212 714961 715069 4.210000e-36 163.0
32 TraesCS1A01G379000 chr6B 85.897 156 17 3 1871 2025 714814 714965 1.510000e-35 161.0
33 TraesCS1A01G379000 chr6B 98.864 88 1 0 2020 2107 68002400 68002313 1.960000e-34 158.0
34 TraesCS1A01G379000 chr7A 81.984 383 56 12 4881 5254 18972128 18972506 3.950000e-81 313.0
35 TraesCS1A01G379000 chr7A 93.814 97 6 0 2009 2105 257695721 257695625 4.240000e-31 147.0
36 TraesCS1A01G379000 chr7A 91.429 105 8 1 2002 2105 583874879 583874983 5.480000e-30 143.0
37 TraesCS1A01G379000 chr7D 86.007 293 27 9 1589 1875 45980863 45980579 8.550000e-78 302.0
38 TraesCS1A01G379000 chr6D 81.287 342 48 14 4927 5254 460563733 460563394 4.040000e-66 263.0
39 TraesCS1A01G379000 chr6D 78.947 342 55 15 4880 5208 11918835 11918498 3.190000e-52 217.0
40 TraesCS1A01G379000 chr6D 79.056 339 52 16 4876 5202 123124715 123124384 1.150000e-51 215.0
41 TraesCS1A01G379000 chr6D 96.703 91 2 1 2021 2111 31474856 31474945 3.280000e-32 150.0
42 TraesCS1A01G379000 chr6D 82.192 73 10 3 199 271 27422239 27422308 5.680000e-05 60.2
43 TraesCS1A01G379000 chr7B 77.778 387 74 12 4876 5254 611494244 611493862 1.470000e-55 228.0
44 TraesCS1A01G379000 chr5B 88.372 172 13 5 1854 2023 462479032 462478866 3.210000e-47 200.0
45 TraesCS1A01G379000 chr5B 98.837 86 1 0 2020 2105 290895025 290894940 2.530000e-33 154.0
46 TraesCS1A01G379000 chr5B 98.837 86 1 0 2021 2106 443003788 443003873 2.530000e-33 154.0
47 TraesCS1A01G379000 chr5B 91.743 109 8 1 2104 2212 533556085 533556192 3.280000e-32 150.0
48 TraesCS1A01G379000 chr5B 90.826 109 9 1 2104 2212 462478868 462478761 1.520000e-30 145.0
49 TraesCS1A01G379000 chr2B 87.209 172 15 5 1854 2023 73468683 73468849 6.950000e-44 189.0
50 TraesCS1A01G379000 chr2B 91.743 109 8 1 2104 2212 73468847 73468954 3.280000e-32 150.0
51 TraesCS1A01G379000 chr6A 98.837 86 1 0 2021 2106 439517401 439517316 2.530000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G379000 chr1A 551319471 551324724 5253 True 4610.000000 7978 100.000000 1 5254 2 chr1A.!!$R2 5253
1 TraesCS1A01G379000 chr1B 630831150 630835699 4549 True 1826.333333 4017 91.958000 453 4790 3 chr1B.!!$R1 4337
2 TraesCS1A01G379000 chr1D 458886950 458891465 4515 True 2032.666667 4013 92.376667 201 4790 3 chr1D.!!$R3 4589
3 TraesCS1A01G379000 chr2D 500267640 500268643 1003 False 976.000000 976 84.699000 1013 1995 1 chr2D.!!$F1 982
4 TraesCS1A01G379000 chr3B 477885249 477886569 1320 True 488.500000 566 81.793500 2527 3849 2 chr3B.!!$R2 1322
5 TraesCS1A01G379000 chr3B 183642557 183643076 519 False 289.000000 433 88.446000 1600 2209 2 chr3B.!!$F1 609
6 TraesCS1A01G379000 chr3D 366453736 366455047 1311 True 482.500000 549 81.732500 2527 3840 2 chr3D.!!$R1 1313
7 TraesCS1A01G379000 chr3A 488721960 488723279 1319 True 481.500000 547 81.598000 2527 3848 2 chr3A.!!$R1 1321
8 TraesCS1A01G379000 chr6B 714479 715069 590 False 235.666667 383 89.202000 1505 2212 3 chr6B.!!$F1 707

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.032515 TCCGGGTAAGCTCATCTCCA 60.033 55.000 0.00 0.00 0.00 3.86 F
985 990 0.105039 GTCCAACCCTAGATCCAGCG 59.895 60.000 0.00 0.00 0.00 5.18 F
992 997 1.214062 CTAGATCCAGCGCCCGATC 59.786 63.158 21.06 21.06 36.03 3.69 F
993 998 2.219325 CTAGATCCAGCGCCCGATCC 62.219 65.000 23.58 11.16 36.36 3.36 F
1850 2167 2.762535 GCCTGTAGCCACTAGTTCAA 57.237 50.000 0.00 0.00 34.35 2.69 F
1851 2168 3.268023 GCCTGTAGCCACTAGTTCAAT 57.732 47.619 0.00 0.00 34.35 2.57 F
1852 2169 3.610911 GCCTGTAGCCACTAGTTCAATT 58.389 45.455 0.00 0.00 34.35 2.32 F
3504 3927 0.525029 CAACGCACACACAACATGCA 60.525 50.000 0.00 0.00 39.39 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1209 1378 1.215382 CTCGTCGGTGATCTTGGCA 59.785 57.895 0.00 0.00 0.00 4.92 R
2097 2427 0.115349 ACTGCAGGTGAGTACTCCCT 59.885 55.000 19.93 20.61 32.76 4.20 R
2098 2428 2.672414 ACTGCAGGTGAGTACTCCC 58.328 57.895 19.93 18.85 0.00 4.30 R
2563 2926 2.884639 ACCACCGAAGAGACCAATTTTG 59.115 45.455 0.00 0.00 0.00 2.44 R
3218 3600 1.542492 CTCAGAGTTTGCCTGCCATT 58.458 50.000 0.00 0.00 0.00 3.16 R
3504 3927 6.477053 AGTAGCTCATTACAGTCATGATGT 57.523 37.500 0.00 7.30 30.15 3.06 R
3663 4086 7.748677 TGGCAATGATATCCTGAAGATTCTTA 58.251 34.615 0.00 0.00 36.33 2.10 R
5214 5673 0.319727 CGAGCTCCATGCAGATCTCC 60.320 60.000 8.47 0.00 45.94 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.614399 CCATCCGGGTAAGCTCATC 57.386 57.895 0.00 0.00 0.00 2.92
28 29 1.051812 CCATCCGGGTAAGCTCATCT 58.948 55.000 0.00 0.00 0.00 2.90
29 30 1.001406 CCATCCGGGTAAGCTCATCTC 59.999 57.143 0.00 0.00 0.00 2.75
30 31 1.001406 CATCCGGGTAAGCTCATCTCC 59.999 57.143 0.00 0.00 0.00 3.71
31 32 0.032515 TCCGGGTAAGCTCATCTCCA 60.033 55.000 0.00 0.00 0.00 3.86
32 33 1.051812 CCGGGTAAGCTCATCTCCAT 58.948 55.000 0.00 0.00 0.00 3.41
33 34 1.417890 CCGGGTAAGCTCATCTCCATT 59.582 52.381 0.00 0.00 0.00 3.16
34 35 2.632996 CCGGGTAAGCTCATCTCCATTA 59.367 50.000 0.00 0.00 0.00 1.90
35 36 3.306364 CCGGGTAAGCTCATCTCCATTAG 60.306 52.174 0.00 0.00 0.00 1.73
36 37 3.306364 CGGGTAAGCTCATCTCCATTAGG 60.306 52.174 0.00 0.00 0.00 2.69
37 38 3.648545 GGGTAAGCTCATCTCCATTAGGT 59.351 47.826 0.00 0.00 35.89 3.08
38 39 4.103311 GGGTAAGCTCATCTCCATTAGGTT 59.897 45.833 0.00 0.00 35.89 3.50
39 40 5.307196 GGGTAAGCTCATCTCCATTAGGTTA 59.693 44.000 0.00 0.00 35.89 2.85
40 41 6.224584 GGTAAGCTCATCTCCATTAGGTTAC 58.775 44.000 12.47 12.47 45.45 2.50
41 42 4.965200 AGCTCATCTCCATTAGGTTACC 57.035 45.455 0.00 0.00 35.89 2.85
42 43 4.561752 AGCTCATCTCCATTAGGTTACCT 58.438 43.478 9.57 9.57 37.71 3.08
43 44 4.971924 AGCTCATCTCCATTAGGTTACCTT 59.028 41.667 10.01 0.00 34.61 3.50
44 45 5.059833 GCTCATCTCCATTAGGTTACCTTG 58.940 45.833 10.01 2.20 34.61 3.61
45 46 5.615289 CTCATCTCCATTAGGTTACCTTGG 58.385 45.833 10.01 12.67 33.90 3.61
46 47 5.285401 TCATCTCCATTAGGTTACCTTGGA 58.715 41.667 20.16 20.16 37.98 3.53
47 48 5.911178 TCATCTCCATTAGGTTACCTTGGAT 59.089 40.000 21.25 8.43 39.12 3.41
48 49 6.389869 TCATCTCCATTAGGTTACCTTGGATT 59.610 38.462 21.25 11.77 39.12 3.01
49 50 6.652205 TCTCCATTAGGTTACCTTGGATTT 57.348 37.500 21.25 0.00 39.12 2.17
50 51 7.039722 TCTCCATTAGGTTACCTTGGATTTT 57.960 36.000 21.25 0.00 39.12 1.82
51 52 6.889722 TCTCCATTAGGTTACCTTGGATTTTG 59.110 38.462 21.25 12.14 39.12 2.44
52 53 6.557568 TCCATTAGGTTACCTTGGATTTTGT 58.442 36.000 18.17 0.00 36.09 2.83
53 54 7.013834 TCCATTAGGTTACCTTGGATTTTGTT 58.986 34.615 18.17 0.00 36.09 2.83
54 55 7.511028 TCCATTAGGTTACCTTGGATTTTGTTT 59.489 33.333 18.17 0.00 36.09 2.83
55 56 8.808092 CCATTAGGTTACCTTGGATTTTGTTTA 58.192 33.333 15.25 0.00 34.36 2.01
80 81 7.562454 TTAATAGTTGCAACATAGTTAGGGC 57.438 36.000 30.11 0.00 0.00 5.19
81 82 3.433306 AGTTGCAACATAGTTAGGGCA 57.567 42.857 30.11 0.00 0.00 5.36
82 83 3.968265 AGTTGCAACATAGTTAGGGCAT 58.032 40.909 30.11 2.79 0.00 4.40
83 84 3.947834 AGTTGCAACATAGTTAGGGCATC 59.052 43.478 30.11 0.00 0.00 3.91
84 85 3.931907 TGCAACATAGTTAGGGCATCT 57.068 42.857 0.00 0.00 0.00 2.90
85 86 3.808728 TGCAACATAGTTAGGGCATCTC 58.191 45.455 0.00 0.00 0.00 2.75
86 87 3.455910 TGCAACATAGTTAGGGCATCTCT 59.544 43.478 0.00 0.00 0.00 3.10
87 88 4.653801 TGCAACATAGTTAGGGCATCTCTA 59.346 41.667 0.00 0.00 0.00 2.43
88 89 5.130311 TGCAACATAGTTAGGGCATCTCTAA 59.870 40.000 0.00 0.00 0.00 2.10
89 90 5.467063 GCAACATAGTTAGGGCATCTCTAAC 59.533 44.000 8.20 8.20 43.98 2.34
95 96 2.998316 AGGGCATCTCTAACTCTTGC 57.002 50.000 0.00 0.00 0.00 4.01
97 98 1.960417 GGCATCTCTAACTCTTGCCC 58.040 55.000 0.77 0.00 45.63 5.36
98 99 1.488393 GGCATCTCTAACTCTTGCCCT 59.512 52.381 0.77 0.00 45.63 5.19
99 100 2.700897 GGCATCTCTAACTCTTGCCCTA 59.299 50.000 0.77 0.00 45.63 3.53
100 101 3.134804 GGCATCTCTAACTCTTGCCCTAA 59.865 47.826 0.77 0.00 45.63 2.69
101 102 4.202409 GGCATCTCTAACTCTTGCCCTAAT 60.202 45.833 0.77 0.00 45.63 1.73
102 103 5.372373 GCATCTCTAACTCTTGCCCTAATT 58.628 41.667 0.00 0.00 0.00 1.40
103 104 5.468409 GCATCTCTAACTCTTGCCCTAATTC 59.532 44.000 0.00 0.00 0.00 2.17
104 105 6.586344 CATCTCTAACTCTTGCCCTAATTCA 58.414 40.000 0.00 0.00 0.00 2.57
105 106 6.620877 TCTCTAACTCTTGCCCTAATTCAA 57.379 37.500 0.00 0.00 0.00 2.69
106 107 6.644347 TCTCTAACTCTTGCCCTAATTCAAG 58.356 40.000 0.00 0.00 40.62 3.02
107 108 6.213600 TCTCTAACTCTTGCCCTAATTCAAGT 59.786 38.462 4.96 0.00 40.27 3.16
108 109 6.407202 TCTAACTCTTGCCCTAATTCAAGTC 58.593 40.000 4.96 0.00 40.27 3.01
109 110 3.956744 ACTCTTGCCCTAATTCAAGTCC 58.043 45.455 4.96 0.00 40.27 3.85
110 111 3.282885 CTCTTGCCCTAATTCAAGTCCC 58.717 50.000 4.96 0.00 40.27 4.46
111 112 2.017049 CTTGCCCTAATTCAAGTCCCG 58.983 52.381 0.00 0.00 36.01 5.14
112 113 1.281419 TGCCCTAATTCAAGTCCCGA 58.719 50.000 0.00 0.00 0.00 5.14
113 114 1.631388 TGCCCTAATTCAAGTCCCGAA 59.369 47.619 0.00 0.00 0.00 4.30
114 115 2.289565 GCCCTAATTCAAGTCCCGAAG 58.710 52.381 0.00 0.00 0.00 3.79
115 116 2.355818 GCCCTAATTCAAGTCCCGAAGT 60.356 50.000 0.00 0.00 0.00 3.01
116 117 3.532542 CCCTAATTCAAGTCCCGAAGTC 58.467 50.000 0.00 0.00 0.00 3.01
117 118 3.197983 CCCTAATTCAAGTCCCGAAGTCT 59.802 47.826 0.00 0.00 0.00 3.24
118 119 4.434520 CCTAATTCAAGTCCCGAAGTCTC 58.565 47.826 0.00 0.00 0.00 3.36
119 120 4.081642 CCTAATTCAAGTCCCGAAGTCTCA 60.082 45.833 0.00 0.00 0.00 3.27
120 121 4.351874 AATTCAAGTCCCGAAGTCTCAA 57.648 40.909 0.00 0.00 0.00 3.02
121 122 4.559862 ATTCAAGTCCCGAAGTCTCAAT 57.440 40.909 0.00 0.00 0.00 2.57
122 123 4.351874 TTCAAGTCCCGAAGTCTCAATT 57.648 40.909 0.00 0.00 0.00 2.32
123 124 3.926616 TCAAGTCCCGAAGTCTCAATTC 58.073 45.455 0.00 0.00 0.00 2.17
124 125 3.003480 CAAGTCCCGAAGTCTCAATTCC 58.997 50.000 0.00 0.00 0.00 3.01
125 126 2.257207 AGTCCCGAAGTCTCAATTCCA 58.743 47.619 0.00 0.00 0.00 3.53
126 127 2.637872 AGTCCCGAAGTCTCAATTCCAA 59.362 45.455 0.00 0.00 0.00 3.53
127 128 3.072476 AGTCCCGAAGTCTCAATTCCAAA 59.928 43.478 0.00 0.00 0.00 3.28
128 129 4.010349 GTCCCGAAGTCTCAATTCCAAAT 58.990 43.478 0.00 0.00 0.00 2.32
129 130 4.459337 GTCCCGAAGTCTCAATTCCAAATT 59.541 41.667 0.00 0.00 0.00 1.82
130 131 5.048013 GTCCCGAAGTCTCAATTCCAAATTT 60.048 40.000 0.00 0.00 0.00 1.82
131 132 5.048083 TCCCGAAGTCTCAATTCCAAATTTG 60.048 40.000 11.40 11.40 0.00 2.32
132 133 5.048083 CCCGAAGTCTCAATTCCAAATTTGA 60.048 40.000 19.86 0.52 0.00 2.69
133 134 6.088824 CCGAAGTCTCAATTCCAAATTTGAG 58.911 40.000 19.86 7.92 46.57 3.02
134 135 6.088824 CGAAGTCTCAATTCCAAATTTGAGG 58.911 40.000 19.86 3.90 45.69 3.86
135 136 6.072508 CGAAGTCTCAATTCCAAATTTGAGGA 60.073 38.462 19.86 6.45 45.69 3.71
136 137 6.830873 AGTCTCAATTCCAAATTTGAGGAG 57.169 37.500 19.86 15.88 45.69 3.69
137 138 6.310149 AGTCTCAATTCCAAATTTGAGGAGT 58.690 36.000 19.86 3.33 45.69 3.85
138 139 6.779539 AGTCTCAATTCCAAATTTGAGGAGTT 59.220 34.615 19.86 9.29 45.69 3.01
139 140 7.944554 AGTCTCAATTCCAAATTTGAGGAGTTA 59.055 33.333 19.86 0.00 45.69 2.24
140 141 8.576442 GTCTCAATTCCAAATTTGAGGAGTTAA 58.424 33.333 19.86 0.00 45.69 2.01
141 142 8.796475 TCTCAATTCCAAATTTGAGGAGTTAAG 58.204 33.333 19.86 7.95 45.69 1.85
142 143 8.704849 TCAATTCCAAATTTGAGGAGTTAAGA 57.295 30.769 19.86 4.69 32.81 2.10
143 144 9.142014 TCAATTCCAAATTTGAGGAGTTAAGAA 57.858 29.630 19.86 10.74 32.81 2.52
144 145 9.415544 CAATTCCAAATTTGAGGAGTTAAGAAG 57.584 33.333 19.86 0.00 32.81 2.85
145 146 7.524717 TTCCAAATTTGAGGAGTTAAGAAGG 57.475 36.000 19.86 0.00 34.91 3.46
146 147 6.848069 TCCAAATTTGAGGAGTTAAGAAGGA 58.152 36.000 19.86 0.00 0.00 3.36
147 148 7.470192 TCCAAATTTGAGGAGTTAAGAAGGAT 58.530 34.615 19.86 0.00 0.00 3.24
148 149 7.611855 TCCAAATTTGAGGAGTTAAGAAGGATC 59.388 37.037 19.86 0.00 0.00 3.36
149 150 7.148000 CCAAATTTGAGGAGTTAAGAAGGATCC 60.148 40.741 19.86 2.48 0.00 3.36
150 151 5.437191 TTTGAGGAGTTAAGAAGGATCCC 57.563 43.478 8.55 0.00 0.00 3.85
151 152 4.074799 TGAGGAGTTAAGAAGGATCCCA 57.925 45.455 8.55 0.00 0.00 4.37
152 153 3.775316 TGAGGAGTTAAGAAGGATCCCAC 59.225 47.826 8.55 2.59 0.00 4.61
153 154 3.775316 GAGGAGTTAAGAAGGATCCCACA 59.225 47.826 8.55 0.00 0.00 4.17
154 155 4.375313 AGGAGTTAAGAAGGATCCCACAT 58.625 43.478 8.55 0.00 0.00 3.21
155 156 4.164988 AGGAGTTAAGAAGGATCCCACATG 59.835 45.833 8.55 0.00 0.00 3.21
156 157 4.455606 GAGTTAAGAAGGATCCCACATGG 58.544 47.826 8.55 0.00 0.00 3.66
167 168 3.593442 TCCCACATGGAAGTTTGTCTT 57.407 42.857 0.00 0.00 41.40 3.01
183 184 9.432982 AAGTTTGTCTTCATCCTATCTCTATCT 57.567 33.333 0.00 0.00 0.00 1.98
184 185 9.432982 AGTTTGTCTTCATCCTATCTCTATCTT 57.567 33.333 0.00 0.00 0.00 2.40
185 186 9.691362 GTTTGTCTTCATCCTATCTCTATCTTC 57.309 37.037 0.00 0.00 0.00 2.87
186 187 9.653516 TTTGTCTTCATCCTATCTCTATCTTCT 57.346 33.333 0.00 0.00 0.00 2.85
187 188 9.653516 TTGTCTTCATCCTATCTCTATCTTCTT 57.346 33.333 0.00 0.00 0.00 2.52
188 189 9.295825 TGTCTTCATCCTATCTCTATCTTCTTC 57.704 37.037 0.00 0.00 0.00 2.87
189 190 8.739972 GTCTTCATCCTATCTCTATCTTCTTCC 58.260 40.741 0.00 0.00 0.00 3.46
190 191 8.677871 TCTTCATCCTATCTCTATCTTCTTCCT 58.322 37.037 0.00 0.00 0.00 3.36
191 192 9.312904 CTTCATCCTATCTCTATCTTCTTCCTT 57.687 37.037 0.00 0.00 0.00 3.36
192 193 8.877864 TCATCCTATCTCTATCTTCTTCCTTC 57.122 38.462 0.00 0.00 0.00 3.46
193 194 7.893302 TCATCCTATCTCTATCTTCTTCCTTCC 59.107 40.741 0.00 0.00 0.00 3.46
194 195 7.168022 TCCTATCTCTATCTTCTTCCTTCCA 57.832 40.000 0.00 0.00 0.00 3.53
195 196 7.007723 TCCTATCTCTATCTTCTTCCTTCCAC 58.992 42.308 0.00 0.00 0.00 4.02
196 197 5.782893 ATCTCTATCTTCTTCCTTCCACG 57.217 43.478 0.00 0.00 0.00 4.94
197 198 4.601084 TCTCTATCTTCTTCCTTCCACGT 58.399 43.478 0.00 0.00 0.00 4.49
198 199 4.399618 TCTCTATCTTCTTCCTTCCACGTG 59.600 45.833 9.08 9.08 0.00 4.49
199 200 2.770164 ATCTTCTTCCTTCCACGTGG 57.230 50.000 29.26 29.26 0.00 4.94
225 226 2.155279 GTTTCCTGAGAGTGCTTTCCC 58.845 52.381 0.00 0.00 0.00 3.97
239 240 3.754188 CTTTCCCAGCAAAATCTCTCG 57.246 47.619 0.00 0.00 0.00 4.04
244 245 2.417933 CCCAGCAAAATCTCTCGAACTG 59.582 50.000 0.00 0.00 0.00 3.16
249 250 3.730061 GCAAAATCTCTCGAACTGCCATG 60.730 47.826 0.00 0.00 0.00 3.66
264 265 5.609423 ACTGCCATGCAATTTCAACTAAAA 58.391 33.333 0.00 0.00 38.41 1.52
266 267 6.711645 ACTGCCATGCAATTTCAACTAAAATT 59.288 30.769 0.00 0.00 38.41 1.82
282 283 2.774439 AATTGCCACGACAACTTCAC 57.226 45.000 0.00 0.00 31.03 3.18
295 296 6.932400 ACGACAACTTCACAAAATCTACCATA 59.068 34.615 0.00 0.00 0.00 2.74
334 335 8.218338 ACTTGTCATGATCAAAAGTGGATATC 57.782 34.615 0.00 0.00 30.17 1.63
337 338 5.237127 GTCATGATCAAAAGTGGATATCGCA 59.763 40.000 0.00 0.00 0.00 5.10
418 422 3.878667 GCTAGGGGGCCATTCGCT 61.879 66.667 4.39 3.37 37.74 4.93
419 423 2.111878 CTAGGGGGCCATTCGCTG 59.888 66.667 4.39 0.00 37.74 5.18
432 436 0.252103 TTCGCTGGGACCTCCTAACT 60.252 55.000 0.00 0.00 36.20 2.24
456 460 2.872858 GGAACGTTTCCCAGCTATCATC 59.127 50.000 0.46 0.00 44.30 2.92
463 467 3.334910 TCCCAGCTATCATCTCCTTCA 57.665 47.619 0.00 0.00 0.00 3.02
464 468 3.657610 TCCCAGCTATCATCTCCTTCAA 58.342 45.455 0.00 0.00 0.00 2.69
566 570 3.091545 ACGAAGCCACAATGAATCCATT 58.908 40.909 0.00 0.00 43.37 3.16
583 587 2.415357 CCATTCCGAATCAAAACACCCG 60.415 50.000 0.00 0.00 0.00 5.28
971 976 3.283684 CCGCCGCACAAAGTCCAA 61.284 61.111 0.00 0.00 0.00 3.53
972 977 2.051345 CGCCGCACAAAGTCCAAC 60.051 61.111 0.00 0.00 0.00 3.77
973 978 2.335011 GCCGCACAAAGTCCAACC 59.665 61.111 0.00 0.00 0.00 3.77
974 979 3.039134 CCGCACAAAGTCCAACCC 58.961 61.111 0.00 0.00 0.00 4.11
975 980 1.528309 CCGCACAAAGTCCAACCCT 60.528 57.895 0.00 0.00 0.00 4.34
976 981 0.250553 CCGCACAAAGTCCAACCCTA 60.251 55.000 0.00 0.00 0.00 3.53
977 982 1.156736 CGCACAAAGTCCAACCCTAG 58.843 55.000 0.00 0.00 0.00 3.02
978 983 1.270625 CGCACAAAGTCCAACCCTAGA 60.271 52.381 0.00 0.00 0.00 2.43
979 984 2.615493 CGCACAAAGTCCAACCCTAGAT 60.615 50.000 0.00 0.00 0.00 1.98
980 985 3.010420 GCACAAAGTCCAACCCTAGATC 58.990 50.000 0.00 0.00 0.00 2.75
981 986 3.610911 CACAAAGTCCAACCCTAGATCC 58.389 50.000 0.00 0.00 0.00 3.36
982 987 3.009033 CACAAAGTCCAACCCTAGATCCA 59.991 47.826 0.00 0.00 0.00 3.41
983 988 3.264450 ACAAAGTCCAACCCTAGATCCAG 59.736 47.826 0.00 0.00 0.00 3.86
984 989 1.501582 AGTCCAACCCTAGATCCAGC 58.498 55.000 0.00 0.00 0.00 4.85
985 990 0.105039 GTCCAACCCTAGATCCAGCG 59.895 60.000 0.00 0.00 0.00 5.18
986 991 1.227674 CCAACCCTAGATCCAGCGC 60.228 63.158 0.00 0.00 0.00 5.92
987 992 1.227674 CAACCCTAGATCCAGCGCC 60.228 63.158 2.29 0.00 0.00 6.53
988 993 2.444256 AACCCTAGATCCAGCGCCC 61.444 63.158 2.29 0.00 0.00 6.13
989 994 3.996124 CCCTAGATCCAGCGCCCG 61.996 72.222 2.29 0.00 0.00 6.13
990 995 2.912542 CCTAGATCCAGCGCCCGA 60.913 66.667 2.29 0.00 0.00 5.14
991 996 2.279069 CCTAGATCCAGCGCCCGAT 61.279 63.158 2.29 4.88 0.00 4.18
992 997 1.214062 CTAGATCCAGCGCCCGATC 59.786 63.158 21.06 21.06 36.03 3.69
993 998 2.219325 CTAGATCCAGCGCCCGATCC 62.219 65.000 23.58 11.16 36.36 3.36
1493 1662 2.897350 CGCATCTCCCTTTCCGCC 60.897 66.667 0.00 0.00 0.00 6.13
1685 1868 8.184192 GGATCTGTGTAGATTGTTAAACATTGG 58.816 37.037 0.00 0.00 43.63 3.16
1850 2167 2.762535 GCCTGTAGCCACTAGTTCAA 57.237 50.000 0.00 0.00 34.35 2.69
1851 2168 3.268023 GCCTGTAGCCACTAGTTCAAT 57.732 47.619 0.00 0.00 34.35 2.57
1852 2169 3.610911 GCCTGTAGCCACTAGTTCAATT 58.389 45.455 0.00 0.00 34.35 2.32
1853 2170 4.010349 GCCTGTAGCCACTAGTTCAATTT 58.990 43.478 0.00 0.00 34.35 1.82
1893 2217 6.467677 ACAGTTATCTATATCATGTGTGGCC 58.532 40.000 0.00 0.00 0.00 5.36
1896 2220 8.314021 CAGTTATCTATATCATGTGTGGCCTAA 58.686 37.037 3.32 0.00 0.00 2.69
1930 2255 5.367945 AACTTGGTTTCTGTGTCCTTAGA 57.632 39.130 0.00 0.00 0.00 2.10
1936 2261 5.014123 TGGTTTCTGTGTCCTTAGATGGATT 59.986 40.000 0.00 0.00 38.52 3.01
1946 2271 8.560374 GTGTCCTTAGATGGATTAATTTACAGC 58.440 37.037 0.00 0.00 38.52 4.40
2025 2355 8.110860 TCTTTTTGGAAGTTGAATCATACTCC 57.889 34.615 0.00 0.00 0.00 3.85
2026 2356 6.834168 TTTTGGAAGTTGAATCATACTCCC 57.166 37.500 3.54 0.07 0.00 4.30
2027 2357 5.779241 TTGGAAGTTGAATCATACTCCCT 57.221 39.130 3.54 0.00 0.00 4.20
2028 2358 5.359194 TGGAAGTTGAATCATACTCCCTC 57.641 43.478 3.54 0.00 0.00 4.30
2029 2359 5.032846 TGGAAGTTGAATCATACTCCCTCT 58.967 41.667 3.54 0.00 0.00 3.69
2030 2360 5.104776 TGGAAGTTGAATCATACTCCCTCTG 60.105 44.000 3.54 0.00 0.00 3.35
2031 2361 5.104735 GGAAGTTGAATCATACTCCCTCTGT 60.105 44.000 0.00 0.00 0.00 3.41
2032 2362 6.098409 GGAAGTTGAATCATACTCCCTCTGTA 59.902 42.308 0.00 0.00 0.00 2.74
2033 2363 7.364762 GGAAGTTGAATCATACTCCCTCTGTAA 60.365 40.741 0.00 0.00 0.00 2.41
2034 2364 7.496346 AGTTGAATCATACTCCCTCTGTAAA 57.504 36.000 0.00 0.00 0.00 2.01
2035 2365 7.331791 AGTTGAATCATACTCCCTCTGTAAAC 58.668 38.462 0.00 0.00 0.00 2.01
2036 2366 7.181125 AGTTGAATCATACTCCCTCTGTAAACT 59.819 37.037 0.00 0.00 0.00 2.66
2037 2367 8.475639 GTTGAATCATACTCCCTCTGTAAACTA 58.524 37.037 0.00 0.00 0.00 2.24
2038 2368 8.603898 TGAATCATACTCCCTCTGTAAACTAA 57.396 34.615 0.00 0.00 0.00 2.24
2039 2369 9.213777 TGAATCATACTCCCTCTGTAAACTAAT 57.786 33.333 0.00 0.00 0.00 1.73
2047 2377 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
2049 2379 9.710818 TCCCTCTGTAAACTAATATAAGAGTGT 57.289 33.333 0.00 0.00 0.00 3.55
2101 2431 9.670442 ACACTCTTATATTAGTTTATGGAGGGA 57.330 33.333 0.00 0.00 0.00 4.20
2103 2433 9.900112 ACTCTTATATTAGTTTATGGAGGGAGT 57.100 33.333 0.00 0.00 0.00 3.85
2161 2492 5.008118 GGAAGTTGTTTCTCTTTCTCAGGTG 59.992 44.000 0.00 0.00 36.03 4.00
2252 2583 9.291664 GTGACATAAGTAAGTGACATTCTCTAC 57.708 37.037 0.00 0.00 0.00 2.59
2253 2584 9.020731 TGACATAAGTAAGTGACATTCTCTACA 57.979 33.333 0.00 0.00 0.00 2.74
2282 2639 8.784043 AGTTCCTTCATGTACATGTCTTTTTAC 58.216 33.333 30.03 20.25 39.72 2.01
2426 2783 5.175859 AGGTACAACATTTCACTATCACCG 58.824 41.667 0.00 0.00 0.00 4.94
2478 2841 4.883240 TGCAGTGTGAGCATGTGT 57.117 50.000 0.00 0.00 37.02 3.72
2660 3023 3.626222 GGCCCATGGTTGGTATTCTACAA 60.626 47.826 11.73 0.00 41.91 2.41
2715 3078 7.335627 TCTTATGGTTTACTGATTGTACCTGG 58.664 38.462 0.00 0.00 30.52 4.45
2722 3094 8.456471 GGTTTACTGATTGTACCTGGTTAATTC 58.544 37.037 3.84 0.86 0.00 2.17
2901 3282 9.658799 TCATATATGCAAGCTATCTTTCCTTAC 57.341 33.333 7.92 0.00 0.00 2.34
3499 3922 4.532276 TCATTATTCAACGCACACACAAC 58.468 39.130 0.00 0.00 0.00 3.32
3504 3927 0.525029 CAACGCACACACAACATGCA 60.525 50.000 0.00 0.00 39.39 3.96
3777 4200 1.676967 CCTGAGCCAGCCTTTCCAC 60.677 63.158 0.00 0.00 0.00 4.02
3895 4318 8.780249 TCTTTTTAGAACAGTAAGTAATGCCAC 58.220 33.333 0.00 0.00 0.00 5.01
3913 4336 3.378427 GCCACTATTTTAGAAGTGCCTGG 59.622 47.826 0.00 0.00 41.45 4.45
3928 4351 5.079643 AGTGCCTGGTCATGAAAATTAGTT 58.920 37.500 0.00 0.00 0.00 2.24
3939 4362 7.277760 GTCATGAAAATTAGTTGGTATTTGCCC 59.722 37.037 0.00 0.00 0.00 5.36
3981 4404 0.249322 GCCCATGCAGCATGAACATC 60.249 55.000 33.17 14.62 43.81 3.06
3991 4414 1.720852 GCATGAACATCGCACAAAACC 59.279 47.619 0.00 0.00 0.00 3.27
4031 4454 7.222161 TGCTTATGATCATCTTACTCAGCAAT 58.778 34.615 12.53 0.00 0.00 3.56
4039 4462 5.578336 TCATCTTACTCAGCAATTTGAGACG 59.422 40.000 12.99 2.76 45.95 4.18
4069 4492 4.082517 TGTGTGCAGTTGCTTGTTTAAGAA 60.083 37.500 5.62 0.00 42.66 2.52
4070 4493 4.500477 GTGTGCAGTTGCTTGTTTAAGAAG 59.500 41.667 5.62 0.00 42.66 2.85
4071 4494 4.397730 TGTGCAGTTGCTTGTTTAAGAAGA 59.602 37.500 6.02 0.00 42.66 2.87
4072 4495 5.105957 TGTGCAGTTGCTTGTTTAAGAAGAA 60.106 36.000 6.02 0.00 42.66 2.52
4081 4504 9.730420 TTGCTTGTTTAAGAAGAATAACTGTTC 57.270 29.630 6.02 0.00 35.92 3.18
4085 4508 8.306680 TGTTTAAGAAGAATAACTGTTCCTCG 57.693 34.615 0.00 0.00 0.00 4.63
4096 4519 2.563179 ACTGTTCCTCGTATGACTGCTT 59.437 45.455 0.00 0.00 0.00 3.91
4135 4558 2.284754 TGCTAACATGCCTGGTGAAA 57.715 45.000 0.00 0.00 0.00 2.69
4140 4563 0.465460 ACATGCCTGGTGAAACGTGT 60.465 50.000 0.00 0.00 38.12 4.49
4175 4598 1.546834 GCAAGTACGACGACATCTCC 58.453 55.000 0.00 0.00 0.00 3.71
4266 4689 0.439985 CGCTTGATGACGAGGTGTTG 59.560 55.000 0.00 0.00 0.00 3.33
4288 4711 2.617021 CCACCGCCCTGTACAAGTTAAT 60.617 50.000 0.00 0.00 0.00 1.40
4552 4980 7.312899 AGTTGTCTGTGTTCAGGTTTTAAAAG 58.687 34.615 0.00 0.00 41.59 2.27
4553 4981 6.827586 TGTCTGTGTTCAGGTTTTAAAAGT 57.172 33.333 0.00 0.00 41.59 2.66
4662 5092 1.298157 CGTGTGTGCCACTATGGGTG 61.298 60.000 0.00 0.00 42.20 4.61
4665 5095 0.324943 GTGTGCCACTATGGGTGTCT 59.675 55.000 0.00 0.00 43.94 3.41
4676 5106 6.488683 CCACTATGGGTGTCTTGTTTCTTTTA 59.511 38.462 0.00 0.00 43.94 1.52
4757 5216 3.872560 GTGTCCGACACTTGTTTAAGG 57.127 47.619 22.08 0.00 45.27 2.69
4790 5249 9.949377 GCTTCTTCGTAAGTTTTAGTTATGTAC 57.051 33.333 0.00 0.00 39.48 2.90
4793 5252 9.846248 TCTTCGTAAGTTTTAGTTATGTACTCC 57.154 33.333 0.00 0.00 37.13 3.85
4794 5253 8.986477 TTCGTAAGTTTTAGTTATGTACTCCC 57.014 34.615 0.00 0.00 37.13 4.30
4795 5254 8.353423 TCGTAAGTTTTAGTTATGTACTCCCT 57.647 34.615 0.00 0.00 37.13 4.20
4796 5255 8.462016 TCGTAAGTTTTAGTTATGTACTCCCTC 58.538 37.037 0.00 0.00 37.13 4.30
4797 5256 7.704047 CGTAAGTTTTAGTTATGTACTCCCTCC 59.296 40.741 0.00 0.00 38.33 4.30
4798 5257 6.556974 AGTTTTAGTTATGTACTCCCTCCC 57.443 41.667 0.00 0.00 38.33 4.30
4799 5258 6.269974 AGTTTTAGTTATGTACTCCCTCCCT 58.730 40.000 0.00 0.00 38.33 4.20
4800 5259 6.734281 AGTTTTAGTTATGTACTCCCTCCCTT 59.266 38.462 0.00 0.00 38.33 3.95
4801 5260 6.803366 TTTAGTTATGTACTCCCTCCCTTC 57.197 41.667 0.00 0.00 38.33 3.46
4802 5261 3.655384 AGTTATGTACTCCCTCCCTTCC 58.345 50.000 0.00 0.00 28.23 3.46
4803 5262 3.275228 AGTTATGTACTCCCTCCCTTCCT 59.725 47.826 0.00 0.00 28.23 3.36
4804 5263 4.485021 AGTTATGTACTCCCTCCCTTCCTA 59.515 45.833 0.00 0.00 28.23 2.94
4805 5264 5.042827 AGTTATGTACTCCCTCCCTTCCTAA 60.043 44.000 0.00 0.00 28.23 2.69
4806 5265 3.399952 TGTACTCCCTCCCTTCCTAAG 57.600 52.381 0.00 0.00 0.00 2.18
4807 5266 2.658489 TGTACTCCCTCCCTTCCTAAGT 59.342 50.000 0.00 0.00 0.00 2.24
4808 5267 3.860470 TGTACTCCCTCCCTTCCTAAGTA 59.140 47.826 0.00 0.00 0.00 2.24
4809 5268 4.485021 TGTACTCCCTCCCTTCCTAAGTAT 59.515 45.833 0.00 0.00 0.00 2.12
4810 5269 4.645968 ACTCCCTCCCTTCCTAAGTATT 57.354 45.455 0.00 0.00 0.00 1.89
4811 5270 4.974194 ACTCCCTCCCTTCCTAAGTATTT 58.026 43.478 0.00 0.00 0.00 1.40
4812 5271 4.722279 ACTCCCTCCCTTCCTAAGTATTTG 59.278 45.833 0.00 0.00 0.00 2.32
4813 5272 3.458487 TCCCTCCCTTCCTAAGTATTTGC 59.542 47.826 0.00 0.00 0.00 3.68
4814 5273 3.202151 CCCTCCCTTCCTAAGTATTTGCA 59.798 47.826 0.00 0.00 0.00 4.08
4815 5274 4.141158 CCCTCCCTTCCTAAGTATTTGCAT 60.141 45.833 0.00 0.00 0.00 3.96
4816 5275 5.073144 CCCTCCCTTCCTAAGTATTTGCATA 59.927 44.000 0.00 0.00 0.00 3.14
4817 5276 6.240292 CCCTCCCTTCCTAAGTATTTGCATAT 60.240 42.308 0.00 0.00 0.00 1.78
4818 5277 6.656693 CCTCCCTTCCTAAGTATTTGCATATG 59.343 42.308 0.00 0.00 0.00 1.78
4819 5278 6.003950 TCCCTTCCTAAGTATTTGCATATGC 58.996 40.000 21.09 21.09 42.50 3.14
4843 5302 7.101993 CATGCTTTGCTTTGTTAAGAGAAAG 57.898 36.000 0.00 0.00 38.72 2.62
4852 5311 6.879188 TTTGTTAAGAGAAAGCCGTTTTTG 57.121 33.333 0.00 0.00 0.00 2.44
4853 5312 5.570234 TGTTAAGAGAAAGCCGTTTTTGT 57.430 34.783 0.00 0.00 0.00 2.83
4854 5313 5.575019 TGTTAAGAGAAAGCCGTTTTTGTC 58.425 37.500 0.00 0.00 32.26 3.18
4855 5314 3.334272 AAGAGAAAGCCGTTTTTGTCG 57.666 42.857 1.99 0.00 35.97 4.35
4861 5320 2.951458 CCGTTTTTGTCGGCCTCC 59.049 61.111 0.00 0.00 41.48 4.30
4862 5321 1.894756 CCGTTTTTGTCGGCCTCCA 60.895 57.895 0.00 0.00 41.48 3.86
4863 5322 1.241315 CCGTTTTTGTCGGCCTCCAT 61.241 55.000 0.00 0.00 41.48 3.41
4864 5323 0.596082 CGTTTTTGTCGGCCTCCATT 59.404 50.000 0.00 0.00 0.00 3.16
4865 5324 1.665735 CGTTTTTGTCGGCCTCCATTG 60.666 52.381 0.00 0.00 0.00 2.82
4866 5325 1.611491 GTTTTTGTCGGCCTCCATTGA 59.389 47.619 0.00 0.00 0.00 2.57
4867 5326 1.533625 TTTTGTCGGCCTCCATTGAG 58.466 50.000 0.00 0.00 38.42 3.02
4947 5406 9.744468 AATCTGAACAAATTGTACAAGTAAACC 57.256 29.630 14.65 3.44 0.00 3.27
4948 5407 8.282455 TCTGAACAAATTGTACAAGTAAACCA 57.718 30.769 14.65 7.50 0.00 3.67
4949 5408 8.402472 TCTGAACAAATTGTACAAGTAAACCAG 58.598 33.333 14.65 15.38 0.00 4.00
4950 5409 7.484975 TGAACAAATTGTACAAGTAAACCAGG 58.515 34.615 14.65 0.00 0.00 4.45
4951 5410 7.339721 TGAACAAATTGTACAAGTAAACCAGGA 59.660 33.333 14.65 0.00 0.00 3.86
4952 5411 7.034685 ACAAATTGTACAAGTAAACCAGGAC 57.965 36.000 14.65 0.00 0.00 3.85
4953 5412 5.934935 AATTGTACAAGTAAACCAGGACG 57.065 39.130 14.65 0.00 0.00 4.79
4954 5413 4.405116 TTGTACAAGTAAACCAGGACGT 57.595 40.909 3.59 0.00 0.00 4.34
4955 5414 3.719924 TGTACAAGTAAACCAGGACGTG 58.280 45.455 0.00 0.00 0.00 4.49
4956 5415 3.384146 TGTACAAGTAAACCAGGACGTGA 59.616 43.478 0.00 0.00 0.00 4.35
4957 5416 3.107642 ACAAGTAAACCAGGACGTGAG 57.892 47.619 0.00 0.00 0.00 3.51
4958 5417 2.696707 ACAAGTAAACCAGGACGTGAGA 59.303 45.455 0.00 0.00 0.00 3.27
4959 5418 3.057734 CAAGTAAACCAGGACGTGAGAC 58.942 50.000 0.00 0.00 0.00 3.36
4960 5419 2.313317 AGTAAACCAGGACGTGAGACA 58.687 47.619 0.00 0.00 0.00 3.41
4961 5420 2.897969 AGTAAACCAGGACGTGAGACAT 59.102 45.455 0.00 0.00 0.00 3.06
4962 5421 4.084287 AGTAAACCAGGACGTGAGACATA 58.916 43.478 0.00 0.00 0.00 2.29
4963 5422 4.710375 AGTAAACCAGGACGTGAGACATAT 59.290 41.667 0.00 0.00 0.00 1.78
4964 5423 3.526931 AACCAGGACGTGAGACATATG 57.473 47.619 0.00 0.00 0.00 1.78
4965 5424 1.137086 ACCAGGACGTGAGACATATGC 59.863 52.381 1.58 0.00 0.00 3.14
4966 5425 1.481240 CAGGACGTGAGACATATGCG 58.519 55.000 1.58 0.11 0.00 4.73
4967 5426 1.103803 AGGACGTGAGACATATGCGT 58.896 50.000 1.58 3.71 38.55 5.24
4968 5427 1.200483 GGACGTGAGACATATGCGTG 58.800 55.000 9.57 0.00 35.86 5.34
4969 5428 1.469251 GGACGTGAGACATATGCGTGT 60.469 52.381 9.57 0.00 35.86 4.49
4970 5429 2.223409 GGACGTGAGACATATGCGTGTA 60.223 50.000 9.57 0.00 35.86 2.90
4971 5430 3.431856 GACGTGAGACATATGCGTGTAA 58.568 45.455 9.57 0.00 35.86 2.41
4972 5431 3.840468 ACGTGAGACATATGCGTGTAAA 58.160 40.909 1.58 0.00 34.36 2.01
4973 5432 3.857665 ACGTGAGACATATGCGTGTAAAG 59.142 43.478 1.58 0.00 34.36 1.85
4974 5433 3.857665 CGTGAGACATATGCGTGTAAAGT 59.142 43.478 1.58 0.00 31.16 2.66
4975 5434 4.326278 CGTGAGACATATGCGTGTAAAGTT 59.674 41.667 1.58 0.00 31.16 2.66
4976 5435 5.163992 CGTGAGACATATGCGTGTAAAGTTT 60.164 40.000 1.58 0.00 31.16 2.66
4977 5436 6.241385 GTGAGACATATGCGTGTAAAGTTTC 58.759 40.000 1.58 0.00 31.16 2.78
4978 5437 5.929415 TGAGACATATGCGTGTAAAGTTTCA 59.071 36.000 1.58 0.00 31.16 2.69
4979 5438 6.090763 TGAGACATATGCGTGTAAAGTTTCAG 59.909 38.462 1.58 0.00 31.16 3.02
4980 5439 5.351465 AGACATATGCGTGTAAAGTTTCAGG 59.649 40.000 1.58 0.00 31.16 3.86
4981 5440 5.242434 ACATATGCGTGTAAAGTTTCAGGA 58.758 37.500 1.58 0.00 0.00 3.86
4982 5441 5.880332 ACATATGCGTGTAAAGTTTCAGGAT 59.120 36.000 1.58 0.00 0.00 3.24
4983 5442 4.685169 ATGCGTGTAAAGTTTCAGGATG 57.315 40.909 0.00 0.00 37.54 3.51
4999 5458 5.879237 TCAGGATGAAATACGTTGAAATGC 58.121 37.500 0.00 0.00 45.97 3.56
5000 5459 4.730042 CAGGATGAAATACGTTGAAATGCG 59.270 41.667 0.00 0.00 39.69 4.73
5001 5460 4.634004 AGGATGAAATACGTTGAAATGCGA 59.366 37.500 0.00 0.00 26.49 5.10
5002 5461 5.296780 AGGATGAAATACGTTGAAATGCGAT 59.703 36.000 0.00 0.00 26.49 4.58
5003 5462 5.971202 GGATGAAATACGTTGAAATGCGATT 59.029 36.000 0.00 0.00 0.00 3.34
5004 5463 6.472163 GGATGAAATACGTTGAAATGCGATTT 59.528 34.615 0.00 0.00 34.64 2.17
5005 5464 6.609907 TGAAATACGTTGAAATGCGATTTG 57.390 33.333 0.00 0.00 31.47 2.32
5006 5465 6.146216 TGAAATACGTTGAAATGCGATTTGT 58.854 32.000 0.00 0.00 31.47 2.83
5007 5466 7.298854 TGAAATACGTTGAAATGCGATTTGTA 58.701 30.769 0.00 0.00 31.47 2.41
5008 5467 7.965655 TGAAATACGTTGAAATGCGATTTGTAT 59.034 29.630 0.00 0.00 31.47 2.29
5009 5468 7.663630 AATACGTTGAAATGCGATTTGTATG 57.336 32.000 0.00 0.00 31.47 2.39
5010 5469 5.289917 ACGTTGAAATGCGATTTGTATGA 57.710 34.783 0.00 0.00 31.47 2.15
5011 5470 5.694816 ACGTTGAAATGCGATTTGTATGAA 58.305 33.333 0.00 0.00 31.47 2.57
5012 5471 6.146216 ACGTTGAAATGCGATTTGTATGAAA 58.854 32.000 0.00 0.00 31.47 2.69
5013 5472 6.638873 ACGTTGAAATGCGATTTGTATGAAAA 59.361 30.769 0.00 0.00 31.47 2.29
5014 5473 7.148983 ACGTTGAAATGCGATTTGTATGAAAAG 60.149 33.333 0.00 0.00 31.47 2.27
5015 5474 7.060518 CGTTGAAATGCGATTTGTATGAAAAGA 59.939 33.333 0.00 0.00 31.47 2.52
5016 5475 7.795431 TGAAATGCGATTTGTATGAAAAGAC 57.205 32.000 0.00 0.00 31.47 3.01
5017 5476 7.366513 TGAAATGCGATTTGTATGAAAAGACA 58.633 30.769 0.00 0.00 31.47 3.41
5018 5477 7.864882 TGAAATGCGATTTGTATGAAAAGACAA 59.135 29.630 0.00 0.00 33.81 3.18
5019 5478 8.586570 AAATGCGATTTGTATGAAAAGACAAA 57.413 26.923 2.95 2.95 46.47 2.83
5028 5487 9.474920 TTTGTATGAAAAGACAAATTCATGGTC 57.525 29.630 10.39 0.00 43.95 4.02
5029 5488 8.408043 TGTATGAAAAGACAAATTCATGGTCT 57.592 30.769 10.39 0.00 43.95 3.85
5036 5495 7.587037 AAGACAAATTCATGGTCTTGAAGAA 57.413 32.000 11.92 0.00 46.81 2.52
5037 5496 7.771927 AGACAAATTCATGGTCTTGAAGAAT 57.228 32.000 0.00 0.00 38.69 2.40
5038 5497 7.600065 AGACAAATTCATGGTCTTGAAGAATG 58.400 34.615 0.00 0.00 38.69 2.67
5039 5498 7.449395 AGACAAATTCATGGTCTTGAAGAATGA 59.551 33.333 5.66 5.66 38.69 2.57
5040 5499 7.954835 ACAAATTCATGGTCTTGAAGAATGAA 58.045 30.769 19.06 19.06 38.90 2.57
5041 5500 8.591072 ACAAATTCATGGTCTTGAAGAATGAAT 58.409 29.630 21.02 21.02 40.87 2.57
5092 5551 3.922171 TTTTTGCACACTCCCCATTTT 57.078 38.095 0.00 0.00 0.00 1.82
5094 5553 5.359194 TTTTTGCACACTCCCCATTTTAA 57.641 34.783 0.00 0.00 0.00 1.52
5095 5554 4.329462 TTTGCACACTCCCCATTTTAAC 57.671 40.909 0.00 0.00 0.00 2.01
5096 5555 1.883275 TGCACACTCCCCATTTTAACG 59.117 47.619 0.00 0.00 0.00 3.18
5097 5556 1.883926 GCACACTCCCCATTTTAACGT 59.116 47.619 0.00 0.00 0.00 3.99
5098 5557 3.075884 GCACACTCCCCATTTTAACGTA 58.924 45.455 0.00 0.00 0.00 3.57
5099 5558 3.692593 GCACACTCCCCATTTTAACGTAT 59.307 43.478 0.00 0.00 0.00 3.06
5100 5559 4.157105 GCACACTCCCCATTTTAACGTATT 59.843 41.667 0.00 0.00 0.00 1.89
5101 5560 5.336134 GCACACTCCCCATTTTAACGTATTT 60.336 40.000 0.00 0.00 0.00 1.40
5102 5561 6.319399 CACACTCCCCATTTTAACGTATTTC 58.681 40.000 0.00 0.00 0.00 2.17
5103 5562 5.122711 ACACTCCCCATTTTAACGTATTTCG 59.877 40.000 0.00 0.00 46.00 3.46
5121 5580 9.763465 CGTATTTCGTCCTAAAAATTTACACAT 57.237 29.630 0.00 0.00 34.52 3.21
5125 5584 8.804688 TTCGTCCTAAAAATTTACACATTTGG 57.195 30.769 0.00 0.00 0.00 3.28
5126 5585 7.371936 TCGTCCTAAAAATTTACACATTTGGG 58.628 34.615 0.00 0.00 35.45 4.12
5127 5586 6.090223 CGTCCTAAAAATTTACACATTTGGGC 59.910 38.462 0.00 0.00 34.49 5.36
5128 5587 6.931840 GTCCTAAAAATTTACACATTTGGGCA 59.068 34.615 0.00 0.00 34.49 5.36
5129 5588 6.931840 TCCTAAAAATTTACACATTTGGGCAC 59.068 34.615 0.00 0.00 34.49 5.01
5130 5589 6.934083 CCTAAAAATTTACACATTTGGGCACT 59.066 34.615 0.00 0.00 0.00 4.40
5131 5590 8.091449 CCTAAAAATTTACACATTTGGGCACTA 58.909 33.333 0.00 0.00 0.00 2.74
5132 5591 9.651913 CTAAAAATTTACACATTTGGGCACTAT 57.348 29.630 0.00 0.00 0.00 2.12
5133 5592 7.903995 AAAATTTACACATTTGGGCACTATG 57.096 32.000 0.00 0.00 0.00 2.23
5134 5593 4.448537 TTTACACATTTGGGCACTATGC 57.551 40.909 2.11 0.00 44.08 3.14
5228 5687 8.945195 AATTTATATTTGGAGATCTGCATGGA 57.055 30.769 18.37 7.75 0.00 3.41
5229 5688 7.991084 TTTATATTTGGAGATCTGCATGGAG 57.009 36.000 18.37 8.12 0.00 3.86
5230 5689 2.048444 TTTGGAGATCTGCATGGAGC 57.952 50.000 18.37 0.00 45.96 4.70
5231 5690 1.210538 TTGGAGATCTGCATGGAGCT 58.789 50.000 18.37 0.00 45.94 4.09
5232 5691 0.757512 TGGAGATCTGCATGGAGCTC 59.242 55.000 13.58 9.79 44.91 4.09
5233 5692 0.319727 GGAGATCTGCATGGAGCTCG 60.320 60.000 9.76 0.00 46.10 5.03
5234 5693 0.672889 GAGATCTGCATGGAGCTCGA 59.327 55.000 9.76 3.70 45.94 4.04
5235 5694 1.273048 GAGATCTGCATGGAGCTCGAT 59.727 52.381 9.76 6.51 45.94 3.59
5236 5695 1.273048 AGATCTGCATGGAGCTCGATC 59.727 52.381 9.76 12.65 44.17 3.69
5237 5696 1.273048 GATCTGCATGGAGCTCGATCT 59.727 52.381 9.76 0.00 45.94 2.75
5238 5697 1.117994 TCTGCATGGAGCTCGATCTT 58.882 50.000 9.76 0.00 45.94 2.40
5239 5698 1.068281 TCTGCATGGAGCTCGATCTTC 59.932 52.381 9.76 2.18 45.94 2.87
5240 5699 0.826062 TGCATGGAGCTCGATCTTCA 59.174 50.000 8.44 0.00 45.94 3.02
5241 5700 1.207811 TGCATGGAGCTCGATCTTCAA 59.792 47.619 8.44 0.00 45.94 2.69
5242 5701 2.283298 GCATGGAGCTCGATCTTCAAA 58.717 47.619 8.44 0.00 41.15 2.69
5243 5702 2.679837 GCATGGAGCTCGATCTTCAAAA 59.320 45.455 8.44 0.00 41.15 2.44
5244 5703 3.242673 GCATGGAGCTCGATCTTCAAAAG 60.243 47.826 8.44 0.00 41.15 2.27
5245 5704 2.350522 TGGAGCTCGATCTTCAAAAGC 58.649 47.619 7.83 0.00 0.00 3.51
5246 5705 2.289631 TGGAGCTCGATCTTCAAAAGCA 60.290 45.455 7.83 0.00 35.42 3.91
5247 5706 2.744202 GGAGCTCGATCTTCAAAAGCAA 59.256 45.455 7.83 0.00 35.42 3.91
5248 5707 3.376546 GGAGCTCGATCTTCAAAAGCAAT 59.623 43.478 7.83 0.00 35.42 3.56
5249 5708 4.142513 GGAGCTCGATCTTCAAAAGCAATT 60.143 41.667 7.83 0.00 35.42 2.32
5250 5709 5.382618 AGCTCGATCTTCAAAAGCAATTT 57.617 34.783 0.00 0.00 35.42 1.82
5251 5710 5.397326 AGCTCGATCTTCAAAAGCAATTTC 58.603 37.500 0.00 0.00 35.42 2.17
5252 5711 4.560427 GCTCGATCTTCAAAAGCAATTTCC 59.440 41.667 0.00 0.00 33.21 3.13
5253 5712 4.722194 TCGATCTTCAAAAGCAATTTCCG 58.278 39.130 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.001406 GAGATGAGCTTACCCGGATGG 59.999 57.143 0.73 0.00 41.37 3.51
10 11 1.001406 GGAGATGAGCTTACCCGGATG 59.999 57.143 0.73 0.00 0.00 3.51
11 12 1.343069 GGAGATGAGCTTACCCGGAT 58.657 55.000 0.73 0.00 0.00 4.18
12 13 0.032515 TGGAGATGAGCTTACCCGGA 60.033 55.000 0.73 0.00 0.00 5.14
13 14 1.051812 ATGGAGATGAGCTTACCCGG 58.948 55.000 0.00 0.00 0.00 5.73
14 15 2.918712 AATGGAGATGAGCTTACCCG 57.081 50.000 0.00 0.00 0.00 5.28
15 16 3.648545 ACCTAATGGAGATGAGCTTACCC 59.351 47.826 0.00 0.00 37.04 3.69
16 17 4.965200 ACCTAATGGAGATGAGCTTACC 57.035 45.455 0.00 0.00 37.04 2.85
17 18 6.042208 AGGTAACCTAATGGAGATGAGCTTAC 59.958 42.308 0.00 0.00 37.04 2.34
18 19 6.143915 AGGTAACCTAATGGAGATGAGCTTA 58.856 40.000 0.00 0.00 37.04 3.09
19 20 4.971924 AGGTAACCTAATGGAGATGAGCTT 59.028 41.667 0.00 0.00 37.04 3.74
20 21 4.561752 AGGTAACCTAATGGAGATGAGCT 58.438 43.478 0.00 0.00 37.04 4.09
21 22 4.965200 AGGTAACCTAATGGAGATGAGC 57.035 45.455 0.00 0.00 37.04 4.26
22 23 5.366768 TCCAAGGTAACCTAATGGAGATGAG 59.633 44.000 0.00 0.00 36.09 2.90
23 24 5.285401 TCCAAGGTAACCTAATGGAGATGA 58.715 41.667 0.00 0.00 36.09 2.92
24 25 5.630415 TCCAAGGTAACCTAATGGAGATG 57.370 43.478 0.00 0.00 36.09 2.90
25 26 6.848562 AATCCAAGGTAACCTAATGGAGAT 57.151 37.500 9.37 0.14 41.94 2.75
26 27 6.652205 AAATCCAAGGTAACCTAATGGAGA 57.348 37.500 9.37 0.00 41.94 3.71
27 28 6.663523 ACAAAATCCAAGGTAACCTAATGGAG 59.336 38.462 9.37 0.26 41.94 3.86
28 29 6.557568 ACAAAATCCAAGGTAACCTAATGGA 58.442 36.000 6.44 6.44 42.57 3.41
29 30 6.850752 ACAAAATCCAAGGTAACCTAATGG 57.149 37.500 0.00 0.00 33.90 3.16
54 55 9.280174 GCCCTAACTATGTTGCAACTATTAATA 57.720 33.333 28.61 16.58 0.00 0.98
55 56 7.777910 TGCCCTAACTATGTTGCAACTATTAAT 59.222 33.333 28.61 16.34 0.00 1.40
56 57 7.113437 TGCCCTAACTATGTTGCAACTATTAA 58.887 34.615 28.61 10.03 0.00 1.40
57 58 6.654959 TGCCCTAACTATGTTGCAACTATTA 58.345 36.000 28.61 18.73 0.00 0.98
58 59 5.505780 TGCCCTAACTATGTTGCAACTATT 58.494 37.500 28.61 18.63 0.00 1.73
59 60 5.110814 TGCCCTAACTATGTTGCAACTAT 57.889 39.130 28.61 21.20 0.00 2.12
60 61 4.561500 TGCCCTAACTATGTTGCAACTA 57.438 40.909 28.61 16.22 0.00 2.24
61 62 3.433306 TGCCCTAACTATGTTGCAACT 57.567 42.857 28.61 16.94 0.00 3.16
62 63 3.947834 AGATGCCCTAACTATGTTGCAAC 59.052 43.478 22.83 22.83 31.81 4.17
63 64 4.080356 AGAGATGCCCTAACTATGTTGCAA 60.080 41.667 0.00 0.00 31.81 4.08
64 65 3.455910 AGAGATGCCCTAACTATGTTGCA 59.544 43.478 0.00 0.00 0.00 4.08
65 66 4.078639 AGAGATGCCCTAACTATGTTGC 57.921 45.455 0.00 0.00 0.00 4.17
73 74 4.123506 GCAAGAGTTAGAGATGCCCTAAC 58.876 47.826 0.00 0.00 43.71 2.34
74 75 4.408182 GCAAGAGTTAGAGATGCCCTAA 57.592 45.455 0.00 0.00 0.00 2.69
76 77 2.998316 GCAAGAGTTAGAGATGCCCT 57.002 50.000 0.00 0.00 0.00 5.19
79 80 2.998316 AGGGCAAGAGTTAGAGATGC 57.002 50.000 0.00 0.00 36.31 3.91
80 81 6.586344 TGAATTAGGGCAAGAGTTAGAGATG 58.414 40.000 0.00 0.00 0.00 2.90
81 82 6.814954 TGAATTAGGGCAAGAGTTAGAGAT 57.185 37.500 0.00 0.00 0.00 2.75
82 83 6.213600 ACTTGAATTAGGGCAAGAGTTAGAGA 59.786 38.462 10.62 0.00 43.11 3.10
83 84 6.410540 ACTTGAATTAGGGCAAGAGTTAGAG 58.589 40.000 10.62 0.00 43.11 2.43
84 85 6.374417 ACTTGAATTAGGGCAAGAGTTAGA 57.626 37.500 10.62 0.00 43.11 2.10
85 86 5.586643 GGACTTGAATTAGGGCAAGAGTTAG 59.413 44.000 10.62 0.00 43.11 2.34
86 87 5.497474 GGACTTGAATTAGGGCAAGAGTTA 58.503 41.667 10.62 0.00 43.11 2.24
87 88 4.336280 GGACTTGAATTAGGGCAAGAGTT 58.664 43.478 10.62 0.00 43.11 3.01
88 89 3.308473 GGGACTTGAATTAGGGCAAGAGT 60.308 47.826 10.62 0.00 43.11 3.24
89 90 3.282885 GGGACTTGAATTAGGGCAAGAG 58.717 50.000 10.62 0.00 43.11 2.85
90 91 2.355716 CGGGACTTGAATTAGGGCAAGA 60.356 50.000 10.62 0.00 43.11 3.02
91 92 2.017049 CGGGACTTGAATTAGGGCAAG 58.983 52.381 0.00 0.00 45.27 4.01
92 93 1.631388 TCGGGACTTGAATTAGGGCAA 59.369 47.619 0.00 0.00 0.00 4.52
93 94 1.281419 TCGGGACTTGAATTAGGGCA 58.719 50.000 0.00 0.00 0.00 5.36
94 95 2.289565 CTTCGGGACTTGAATTAGGGC 58.710 52.381 0.00 0.00 0.00 5.19
95 96 3.197983 AGACTTCGGGACTTGAATTAGGG 59.802 47.826 0.00 0.00 0.00 3.53
96 97 4.081642 TGAGACTTCGGGACTTGAATTAGG 60.082 45.833 0.00 0.00 0.00 2.69
97 98 5.073311 TGAGACTTCGGGACTTGAATTAG 57.927 43.478 0.00 0.00 0.00 1.73
98 99 5.477607 TTGAGACTTCGGGACTTGAATTA 57.522 39.130 0.00 0.00 0.00 1.40
99 100 4.351874 TTGAGACTTCGGGACTTGAATT 57.648 40.909 0.00 0.00 0.00 2.17
100 101 4.559862 ATTGAGACTTCGGGACTTGAAT 57.440 40.909 0.00 0.00 0.00 2.57
101 102 4.315803 GAATTGAGACTTCGGGACTTGAA 58.684 43.478 0.00 0.00 0.00 2.69
102 103 3.306780 GGAATTGAGACTTCGGGACTTGA 60.307 47.826 0.00 0.00 0.00 3.02
103 104 3.003480 GGAATTGAGACTTCGGGACTTG 58.997 50.000 0.00 0.00 0.00 3.16
104 105 2.637872 TGGAATTGAGACTTCGGGACTT 59.362 45.455 0.00 0.00 0.00 3.01
105 106 2.257207 TGGAATTGAGACTTCGGGACT 58.743 47.619 0.00 0.00 0.00 3.85
106 107 2.762535 TGGAATTGAGACTTCGGGAC 57.237 50.000 0.00 0.00 0.00 4.46
107 108 3.780804 TTTGGAATTGAGACTTCGGGA 57.219 42.857 0.00 0.00 0.00 5.14
108 109 5.048083 TCAAATTTGGAATTGAGACTTCGGG 60.048 40.000 17.90 0.00 32.14 5.14
109 110 6.012658 TCAAATTTGGAATTGAGACTTCGG 57.987 37.500 17.90 0.00 32.14 4.30
117 118 8.704849 TCTTAACTCCTCAAATTTGGAATTGA 57.295 30.769 17.90 1.33 34.57 2.57
118 119 9.415544 CTTCTTAACTCCTCAAATTTGGAATTG 57.584 33.333 17.90 7.70 31.23 2.32
119 120 8.588472 CCTTCTTAACTCCTCAAATTTGGAATT 58.412 33.333 17.90 7.33 31.23 2.17
120 121 7.950124 TCCTTCTTAACTCCTCAAATTTGGAAT 59.050 33.333 17.90 0.00 31.23 3.01
121 122 7.294584 TCCTTCTTAACTCCTCAAATTTGGAA 58.705 34.615 17.90 8.93 31.23 3.53
122 123 6.848069 TCCTTCTTAACTCCTCAAATTTGGA 58.152 36.000 17.90 7.64 0.00 3.53
123 124 7.148000 GGATCCTTCTTAACTCCTCAAATTTGG 60.148 40.741 17.90 8.72 0.00 3.28
124 125 7.148000 GGGATCCTTCTTAACTCCTCAAATTTG 60.148 40.741 12.58 12.15 0.00 2.32
125 126 6.892456 GGGATCCTTCTTAACTCCTCAAATTT 59.108 38.462 12.58 0.00 0.00 1.82
126 127 6.011628 TGGGATCCTTCTTAACTCCTCAAATT 60.012 38.462 12.58 0.00 0.00 1.82
127 128 5.492524 TGGGATCCTTCTTAACTCCTCAAAT 59.507 40.000 12.58 0.00 0.00 2.32
128 129 4.849810 TGGGATCCTTCTTAACTCCTCAAA 59.150 41.667 12.58 0.00 0.00 2.69
129 130 4.225267 GTGGGATCCTTCTTAACTCCTCAA 59.775 45.833 12.58 0.00 0.00 3.02
130 131 3.775316 GTGGGATCCTTCTTAACTCCTCA 59.225 47.826 12.58 0.00 0.00 3.86
131 132 3.775316 TGTGGGATCCTTCTTAACTCCTC 59.225 47.826 12.58 0.00 0.00 3.71
132 133 3.803340 TGTGGGATCCTTCTTAACTCCT 58.197 45.455 12.58 0.00 0.00 3.69
133 134 4.455606 CATGTGGGATCCTTCTTAACTCC 58.544 47.826 12.58 0.00 0.00 3.85
134 135 4.164221 TCCATGTGGGATCCTTCTTAACTC 59.836 45.833 12.58 0.00 42.15 3.01
135 136 4.111577 TCCATGTGGGATCCTTCTTAACT 58.888 43.478 12.58 0.00 42.15 2.24
136 137 4.503714 TCCATGTGGGATCCTTCTTAAC 57.496 45.455 12.58 1.92 42.15 2.01
147 148 3.486383 GAAGACAAACTTCCATGTGGGA 58.514 45.455 0.00 0.00 46.48 4.37
148 149 3.923017 GAAGACAAACTTCCATGTGGG 57.077 47.619 0.00 0.00 46.48 4.61
157 158 9.432982 AGATAGAGATAGGATGAAGACAAACTT 57.567 33.333 0.00 0.00 42.03 2.66
158 159 9.432982 AAGATAGAGATAGGATGAAGACAAACT 57.567 33.333 0.00 0.00 0.00 2.66
159 160 9.691362 GAAGATAGAGATAGGATGAAGACAAAC 57.309 37.037 0.00 0.00 0.00 2.93
160 161 9.653516 AGAAGATAGAGATAGGATGAAGACAAA 57.346 33.333 0.00 0.00 0.00 2.83
161 162 9.653516 AAGAAGATAGAGATAGGATGAAGACAA 57.346 33.333 0.00 0.00 0.00 3.18
162 163 9.295825 GAAGAAGATAGAGATAGGATGAAGACA 57.704 37.037 0.00 0.00 0.00 3.41
163 164 8.739972 GGAAGAAGATAGAGATAGGATGAAGAC 58.260 40.741 0.00 0.00 0.00 3.01
164 165 8.677871 AGGAAGAAGATAGAGATAGGATGAAGA 58.322 37.037 0.00 0.00 0.00 2.87
165 166 8.884124 AGGAAGAAGATAGAGATAGGATGAAG 57.116 38.462 0.00 0.00 0.00 3.02
166 167 9.308000 GAAGGAAGAAGATAGAGATAGGATGAA 57.692 37.037 0.00 0.00 0.00 2.57
167 168 7.893302 GGAAGGAAGAAGATAGAGATAGGATGA 59.107 40.741 0.00 0.00 0.00 2.92
168 169 7.673504 TGGAAGGAAGAAGATAGAGATAGGATG 59.326 40.741 0.00 0.00 0.00 3.51
169 170 7.673926 GTGGAAGGAAGAAGATAGAGATAGGAT 59.326 40.741 0.00 0.00 0.00 3.24
170 171 7.007723 GTGGAAGGAAGAAGATAGAGATAGGA 58.992 42.308 0.00 0.00 0.00 2.94
171 172 6.072175 CGTGGAAGGAAGAAGATAGAGATAGG 60.072 46.154 0.00 0.00 0.00 2.57
172 173 6.488683 ACGTGGAAGGAAGAAGATAGAGATAG 59.511 42.308 0.00 0.00 0.00 2.08
173 174 6.263392 CACGTGGAAGGAAGAAGATAGAGATA 59.737 42.308 7.95 0.00 0.00 1.98
174 175 5.068460 CACGTGGAAGGAAGAAGATAGAGAT 59.932 44.000 7.95 0.00 0.00 2.75
175 176 4.399618 CACGTGGAAGGAAGAAGATAGAGA 59.600 45.833 7.95 0.00 0.00 3.10
176 177 4.440802 CCACGTGGAAGGAAGAAGATAGAG 60.441 50.000 31.31 0.00 37.39 2.43
177 178 3.447586 CCACGTGGAAGGAAGAAGATAGA 59.552 47.826 31.31 0.00 37.39 1.98
178 179 3.447586 TCCACGTGGAAGGAAGAAGATAG 59.552 47.826 34.60 2.75 42.18 2.08
179 180 3.437213 TCCACGTGGAAGGAAGAAGATA 58.563 45.455 34.60 7.29 42.18 1.98
180 181 2.257207 TCCACGTGGAAGGAAGAAGAT 58.743 47.619 34.60 0.00 42.18 2.40
181 182 1.712056 TCCACGTGGAAGGAAGAAGA 58.288 50.000 34.60 8.10 42.18 2.87
196 197 3.002348 CACTCTCAGGAAACGTTTTCCAC 59.998 47.826 22.86 12.52 41.00 4.02
197 198 3.202906 CACTCTCAGGAAACGTTTTCCA 58.797 45.455 22.86 9.44 41.00 3.53
198 199 2.031944 GCACTCTCAGGAAACGTTTTCC 60.032 50.000 15.89 16.50 38.86 3.13
199 200 2.872858 AGCACTCTCAGGAAACGTTTTC 59.127 45.455 15.89 13.71 0.00 2.29
205 206 2.155279 GGGAAAGCACTCTCAGGAAAC 58.845 52.381 0.00 0.00 0.00 2.78
208 209 0.979665 CTGGGAAAGCACTCTCAGGA 59.020 55.000 6.98 0.00 39.84 3.86
225 226 2.159599 GGCAGTTCGAGAGATTTTGCTG 60.160 50.000 0.00 0.00 41.60 4.41
229 230 2.421424 GCATGGCAGTTCGAGAGATTTT 59.579 45.455 0.00 0.00 41.60 1.82
232 233 0.538584 TGCATGGCAGTTCGAGAGAT 59.461 50.000 0.00 0.00 35.08 2.75
233 234 0.321346 TTGCATGGCAGTTCGAGAGA 59.679 50.000 0.00 0.00 40.61 3.10
236 237 2.095110 TGAAATTGCATGGCAGTTCGAG 60.095 45.455 0.00 0.00 37.50 4.04
237 238 1.885233 TGAAATTGCATGGCAGTTCGA 59.115 42.857 0.00 0.00 37.50 3.71
238 239 2.350899 TGAAATTGCATGGCAGTTCG 57.649 45.000 0.00 0.00 37.50 3.95
239 240 3.656559 AGTTGAAATTGCATGGCAGTTC 58.343 40.909 0.00 4.96 37.50 3.01
264 265 1.674359 TGTGAAGTTGTCGTGGCAAT 58.326 45.000 0.00 0.00 0.00 3.56
266 267 1.454201 TTTGTGAAGTTGTCGTGGCA 58.546 45.000 0.00 0.00 0.00 4.92
272 273 7.094805 TGCTATGGTAGATTTTGTGAAGTTGTC 60.095 37.037 0.00 0.00 0.00 3.18
282 283 9.906660 TTTGTAAAGTTGCTATGGTAGATTTTG 57.093 29.630 0.00 0.00 0.00 2.44
295 296 6.862209 TCATGACAAGTTTTGTAAAGTTGCT 58.138 32.000 15.86 6.93 45.52 3.91
309 310 7.011763 CGATATCCACTTTTGATCATGACAAGT 59.988 37.037 0.00 1.54 0.00 3.16
391 395 1.780107 GCCCCCTAGCCCTTGGATAC 61.780 65.000 0.00 0.00 0.00 2.24
411 415 0.830648 TTAGGAGGTCCCAGCGAATG 59.169 55.000 0.00 0.00 37.41 2.67
412 416 0.831307 GTTAGGAGGTCCCAGCGAAT 59.169 55.000 0.00 0.00 37.41 3.34
414 418 0.627451 TAGTTAGGAGGTCCCAGCGA 59.373 55.000 0.00 0.00 37.41 4.93
415 419 1.033574 CTAGTTAGGAGGTCCCAGCG 58.966 60.000 0.00 0.00 37.41 5.18
416 420 1.415200 CCTAGTTAGGAGGTCCCAGC 58.585 60.000 0.00 0.00 46.63 4.85
417 421 1.574339 TCCCTAGTTAGGAGGTCCCAG 59.426 57.143 6.77 0.00 46.63 4.45
418 422 1.702699 TCCCTAGTTAGGAGGTCCCA 58.297 55.000 6.77 0.00 46.63 4.37
419 423 2.396608 GTTCCCTAGTTAGGAGGTCCC 58.603 57.143 6.77 0.00 46.63 4.46
493 497 5.412526 TGTTTTTGTTCGCTCTCGTTTAT 57.587 34.783 0.00 0.00 36.96 1.40
494 498 4.260456 CCTGTTTTTGTTCGCTCTCGTTTA 60.260 41.667 0.00 0.00 36.96 2.01
566 570 1.238625 GCCGGGTGTTTTGATTCGGA 61.239 55.000 2.18 0.00 39.83 4.55
954 959 3.283684 TTGGACTTTGTGCGGCGG 61.284 61.111 9.78 0.00 0.00 6.13
955 960 2.051345 GTTGGACTTTGTGCGGCG 60.051 61.111 0.51 0.51 0.00 6.46
956 961 2.335011 GGTTGGACTTTGTGCGGC 59.665 61.111 0.00 0.00 0.00 6.53
957 962 0.250553 TAGGGTTGGACTTTGTGCGG 60.251 55.000 0.00 0.00 0.00 5.69
958 963 1.156736 CTAGGGTTGGACTTTGTGCG 58.843 55.000 0.00 0.00 0.00 5.34
959 964 2.561478 TCTAGGGTTGGACTTTGTGC 57.439 50.000 0.00 0.00 0.00 4.57
960 965 3.009033 TGGATCTAGGGTTGGACTTTGTG 59.991 47.826 0.00 0.00 0.00 3.33
961 966 3.256704 TGGATCTAGGGTTGGACTTTGT 58.743 45.455 0.00 0.00 0.00 2.83
962 967 3.878778 CTGGATCTAGGGTTGGACTTTG 58.121 50.000 0.00 0.00 0.00 2.77
963 968 2.239907 GCTGGATCTAGGGTTGGACTTT 59.760 50.000 8.31 0.00 0.00 2.66
964 969 1.840635 GCTGGATCTAGGGTTGGACTT 59.159 52.381 8.31 0.00 0.00 3.01
965 970 1.501582 GCTGGATCTAGGGTTGGACT 58.498 55.000 8.31 0.00 0.00 3.85
966 971 0.105039 CGCTGGATCTAGGGTTGGAC 59.895 60.000 14.14 0.00 0.00 4.02
967 972 1.686325 GCGCTGGATCTAGGGTTGGA 61.686 60.000 21.56 0.00 33.56 3.53
968 973 1.227674 GCGCTGGATCTAGGGTTGG 60.228 63.158 21.56 0.00 33.56 3.77
969 974 1.227674 GGCGCTGGATCTAGGGTTG 60.228 63.158 21.56 0.00 33.56 3.77
970 975 2.444256 GGGCGCTGGATCTAGGGTT 61.444 63.158 21.56 0.00 33.56 4.11
971 976 2.844839 GGGCGCTGGATCTAGGGT 60.845 66.667 21.56 0.00 33.56 4.34
972 977 3.996124 CGGGCGCTGGATCTAGGG 61.996 72.222 17.48 17.48 0.00 3.53
973 978 2.219325 GATCGGGCGCTGGATCTAGG 62.219 65.000 24.34 0.00 36.86 3.02
974 979 1.214062 GATCGGGCGCTGGATCTAG 59.786 63.158 24.34 0.86 36.86 2.43
975 980 2.276116 GGATCGGGCGCTGGATCTA 61.276 63.158 27.74 4.06 39.19 1.98
976 981 3.620785 GGATCGGGCGCTGGATCT 61.621 66.667 27.74 7.39 39.19 2.75
1209 1378 1.215382 CTCGTCGGTGATCTTGGCA 59.785 57.895 0.00 0.00 0.00 4.92
1493 1662 3.737172 CAGTTGCGGAAAGGGCGG 61.737 66.667 0.00 0.00 0.00 6.13
1498 1667 1.270550 AGGAAATGCAGTTGCGGAAAG 59.729 47.619 12.74 0.00 45.83 2.62
1508 1677 1.503542 GGCACGACAGGAAATGCAG 59.496 57.895 0.00 0.00 39.92 4.41
1630 1800 5.933187 ACACAACAAGCAATCAACGTATA 57.067 34.783 0.00 0.00 0.00 1.47
1634 1804 2.788786 GGAACACAACAAGCAATCAACG 59.211 45.455 0.00 0.00 0.00 4.10
1775 1958 6.059484 TCACACAGATGCACATATGAATCAT 58.941 36.000 10.38 8.99 42.85 2.45
1780 1963 8.755977 AGATATATCACACAGATGCACATATGA 58.244 33.333 15.08 0.00 37.57 2.15
1781 1964 8.943909 AGATATATCACACAGATGCACATATG 57.056 34.615 15.08 0.00 37.57 1.78
1885 2209 6.553953 TTCTAGTATTCATTAGGCCACACA 57.446 37.500 5.01 0.00 0.00 3.72
1918 2243 9.613428 TGTAAATTAATCCATCTAAGGACACAG 57.387 33.333 0.00 0.00 41.30 3.66
1919 2244 9.613428 CTGTAAATTAATCCATCTAAGGACACA 57.387 33.333 0.00 0.00 41.30 3.72
1930 2255 4.038402 GCAGCAGGCTGTAAATTAATCCAT 59.962 41.667 21.19 0.00 45.24 3.41
1936 2261 3.684908 TCTTGCAGCAGGCTGTAAATTA 58.315 40.909 21.91 10.53 45.24 1.40
1990 2315 2.421751 TCCAAAAAGAACACCACCGA 57.578 45.000 0.00 0.00 0.00 4.69
2075 2405 9.670442 TCCCTCCATAAACTAATATAAGAGTGT 57.330 33.333 0.00 0.00 0.00 3.55
2077 2407 9.900112 ACTCCCTCCATAAACTAATATAAGAGT 57.100 33.333 0.00 0.00 0.00 3.24
2083 2413 9.091220 GTGAGTACTCCCTCCATAAACTAATAT 57.909 37.037 20.11 0.00 0.00 1.28
2084 2414 7.508296 GGTGAGTACTCCCTCCATAAACTAATA 59.492 40.741 20.11 0.00 0.00 0.98
2085 2415 6.326843 GGTGAGTACTCCCTCCATAAACTAAT 59.673 42.308 20.11 0.00 0.00 1.73
2086 2416 5.659971 GGTGAGTACTCCCTCCATAAACTAA 59.340 44.000 20.11 0.00 0.00 2.24
2087 2417 5.043582 AGGTGAGTACTCCCTCCATAAACTA 60.044 44.000 20.11 0.00 0.00 2.24
2088 2418 4.031611 GGTGAGTACTCCCTCCATAAACT 58.968 47.826 20.11 0.00 0.00 2.66
2089 2419 4.031611 AGGTGAGTACTCCCTCCATAAAC 58.968 47.826 20.11 7.90 0.00 2.01
2090 2420 4.030913 CAGGTGAGTACTCCCTCCATAAA 58.969 47.826 22.84 0.64 31.00 1.40
2091 2421 3.643237 CAGGTGAGTACTCCCTCCATAA 58.357 50.000 22.84 1.29 31.00 1.90
2092 2422 2.690026 GCAGGTGAGTACTCCCTCCATA 60.690 54.545 22.84 1.96 31.00 2.74
2093 2423 1.967274 GCAGGTGAGTACTCCCTCCAT 60.967 57.143 22.84 10.44 31.00 3.41
2094 2424 0.614979 GCAGGTGAGTACTCCCTCCA 60.615 60.000 22.84 3.88 31.00 3.86
2095 2425 0.614979 TGCAGGTGAGTACTCCCTCC 60.615 60.000 22.84 19.50 31.00 4.30
2096 2426 0.820871 CTGCAGGTGAGTACTCCCTC 59.179 60.000 22.84 18.47 31.00 4.30
2097 2427 0.115349 ACTGCAGGTGAGTACTCCCT 59.885 55.000 19.93 20.61 32.76 4.20
2098 2428 2.672414 ACTGCAGGTGAGTACTCCC 58.328 57.895 19.93 18.85 0.00 4.30
2252 2583 4.245660 ACATGTACATGAAGGAACTCGTG 58.754 43.478 36.36 12.13 41.20 4.35
2253 2584 4.220821 AGACATGTACATGAAGGAACTCGT 59.779 41.667 36.36 14.34 41.20 4.18
2303 2660 5.583061 AGTCGTGTGTCTCTACAAGATAGAG 59.417 44.000 4.83 4.83 40.27 2.43
2563 2926 2.884639 ACCACCGAAGAGACCAATTTTG 59.115 45.455 0.00 0.00 0.00 2.44
2715 3078 6.564709 ACCACCTAAGGAAAACGAATTAAC 57.435 37.500 0.00 0.00 0.00 2.01
2722 3094 4.213482 CAGAGAAACCACCTAAGGAAAACG 59.787 45.833 0.00 0.00 0.00 3.60
2901 3282 2.997986 GCCTGCCACAGAAATCATTTTG 59.002 45.455 0.00 0.00 32.44 2.44
3203 3585 7.771183 TGCCTGCCATTTAAGAGTAATAAAAG 58.229 34.615 0.00 0.00 0.00 2.27
3218 3600 1.542492 CTCAGAGTTTGCCTGCCATT 58.458 50.000 0.00 0.00 0.00 3.16
3504 3927 6.477053 AGTAGCTCATTACAGTCATGATGT 57.523 37.500 0.00 7.30 30.15 3.06
3663 4086 7.748677 TGGCAATGATATCCTGAAGATTCTTA 58.251 34.615 0.00 0.00 36.33 2.10
3895 4318 6.115446 TCATGACCAGGCACTTCTAAAATAG 58.885 40.000 0.00 0.00 34.60 1.73
3913 4336 7.277760 GGGCAAATACCAACTAATTTTCATGAC 59.722 37.037 0.00 0.00 0.00 3.06
3939 4362 0.320073 CCACAGGTTTGCAAGCATGG 60.320 55.000 27.47 20.13 33.16 3.66
3981 4404 4.843984 CAGAAACGTAATAGGTTTTGTGCG 59.156 41.667 11.65 0.00 36.46 5.34
3991 4414 8.817100 TGATCATAAGCAACAGAAACGTAATAG 58.183 33.333 0.00 0.00 0.00 1.73
4031 4454 2.223249 GCACACAAAAGAGCGTCTCAAA 60.223 45.455 9.09 0.00 32.06 2.69
4039 4462 1.202336 AGCAACTGCACACAAAAGAGC 60.202 47.619 4.22 0.00 45.16 4.09
4069 4492 6.565234 CAGTCATACGAGGAACAGTTATTCT 58.435 40.000 0.00 0.00 0.00 2.40
4070 4493 5.232414 GCAGTCATACGAGGAACAGTTATTC 59.768 44.000 0.00 0.00 0.00 1.75
4071 4494 5.105310 AGCAGTCATACGAGGAACAGTTATT 60.105 40.000 0.00 0.00 0.00 1.40
4072 4495 4.402793 AGCAGTCATACGAGGAACAGTTAT 59.597 41.667 0.00 0.00 0.00 1.89
4081 4504 2.386661 AACCAAGCAGTCATACGAGG 57.613 50.000 0.00 0.00 0.00 4.63
4085 4508 7.409697 CACACAATATAACCAAGCAGTCATAC 58.590 38.462 0.00 0.00 0.00 2.39
4096 4519 3.671971 GCAAAGCGCACACAATATAACCA 60.672 43.478 11.47 0.00 41.79 3.67
4135 4558 1.807377 CGTCCAAAACACCCTACACGT 60.807 52.381 0.00 0.00 0.00 4.49
4140 4563 0.183014 TTGCCGTCCAAAACACCCTA 59.817 50.000 0.00 0.00 0.00 3.53
4175 4598 1.625870 CATGTAGAACGCGTGCTCG 59.374 57.895 26.26 7.28 40.37 5.03
4266 4689 2.746277 CTTGTACAGGGCGGTGGC 60.746 66.667 0.00 0.00 38.90 5.01
4570 4998 5.097742 TCTCAGAGAAACCAAAAGACACA 57.902 39.130 0.00 0.00 0.00 3.72
4662 5092 9.366216 ACAAGAAACCATTAAAAGAAACAAGAC 57.634 29.630 0.00 0.00 0.00 3.01
4665 5095 9.883142 ATCACAAGAAACCATTAAAAGAAACAA 57.117 25.926 0.00 0.00 0.00 2.83
4676 5106 9.685276 TCTATGTTATCATCACAAGAAACCATT 57.315 29.630 0.00 0.00 35.70 3.16
4757 5216 3.027974 ACTTACGAAGAAGCCACAGTC 57.972 47.619 0.00 0.00 0.00 3.51
4790 5249 4.445019 GCAAATACTTAGGAAGGGAGGGAG 60.445 50.000 0.00 0.00 0.00 4.30
4791 5250 3.458487 GCAAATACTTAGGAAGGGAGGGA 59.542 47.826 0.00 0.00 0.00 4.20
4792 5251 3.202151 TGCAAATACTTAGGAAGGGAGGG 59.798 47.826 0.00 0.00 0.00 4.30
4793 5252 4.503714 TGCAAATACTTAGGAAGGGAGG 57.496 45.455 0.00 0.00 0.00 4.30
4794 5253 6.150140 GCATATGCAAATACTTAGGAAGGGAG 59.850 42.308 22.84 0.00 41.59 4.30
4795 5254 6.003950 GCATATGCAAATACTTAGGAAGGGA 58.996 40.000 22.84 0.00 41.59 4.20
4796 5255 6.259550 GCATATGCAAATACTTAGGAAGGG 57.740 41.667 22.84 0.00 41.59 3.95
4819 5278 7.101993 CTTTCTCTTAACAAAGCAAAGCATG 57.898 36.000 0.00 0.00 0.00 4.06
4828 5287 6.530181 ACAAAAACGGCTTTCTCTTAACAAAG 59.470 34.615 0.00 0.00 33.45 2.77
4829 5288 6.391537 ACAAAAACGGCTTTCTCTTAACAAA 58.608 32.000 0.00 0.00 0.00 2.83
4830 5289 5.956642 ACAAAAACGGCTTTCTCTTAACAA 58.043 33.333 0.00 0.00 0.00 2.83
4831 5290 5.570234 ACAAAAACGGCTTTCTCTTAACA 57.430 34.783 0.00 0.00 0.00 2.41
4832 5291 4.669283 CGACAAAAACGGCTTTCTCTTAAC 59.331 41.667 0.00 0.00 0.00 2.01
4833 5292 4.260866 CCGACAAAAACGGCTTTCTCTTAA 60.261 41.667 0.00 0.00 43.74 1.85
4834 5293 3.249080 CCGACAAAAACGGCTTTCTCTTA 59.751 43.478 0.00 0.00 43.74 2.10
4835 5294 2.032924 CCGACAAAAACGGCTTTCTCTT 59.967 45.455 0.00 0.00 43.74 2.85
4836 5295 1.602377 CCGACAAAAACGGCTTTCTCT 59.398 47.619 0.00 0.00 43.74 3.10
4837 5296 2.032414 CCGACAAAAACGGCTTTCTC 57.968 50.000 0.00 0.00 43.74 2.87
4845 5304 0.596082 AATGGAGGCCGACAAAAACG 59.404 50.000 6.50 0.00 0.00 3.60
4846 5305 1.611491 TCAATGGAGGCCGACAAAAAC 59.389 47.619 6.50 0.00 0.00 2.43
4847 5306 1.885887 CTCAATGGAGGCCGACAAAAA 59.114 47.619 6.50 0.00 37.51 1.94
4848 5307 1.533625 CTCAATGGAGGCCGACAAAA 58.466 50.000 6.50 0.00 37.51 2.44
4849 5308 3.248043 CTCAATGGAGGCCGACAAA 57.752 52.632 6.50 0.00 37.51 2.83
4921 5380 9.744468 GGTTTACTTGTACAATTTGTTCAGATT 57.256 29.630 9.13 0.49 29.59 2.40
4922 5381 8.908903 TGGTTTACTTGTACAATTTGTTCAGAT 58.091 29.630 9.13 3.89 29.59 2.90
4923 5382 8.282455 TGGTTTACTTGTACAATTTGTTCAGA 57.718 30.769 9.13 0.31 29.59 3.27
4924 5383 7.647715 CCTGGTTTACTTGTACAATTTGTTCAG 59.352 37.037 9.13 12.39 29.59 3.02
4925 5384 7.339721 TCCTGGTTTACTTGTACAATTTGTTCA 59.660 33.333 9.13 6.05 0.00 3.18
4926 5385 7.646526 GTCCTGGTTTACTTGTACAATTTGTTC 59.353 37.037 9.13 3.19 0.00 3.18
4927 5386 7.485810 GTCCTGGTTTACTTGTACAATTTGTT 58.514 34.615 9.13 0.00 0.00 2.83
4928 5387 6.238538 CGTCCTGGTTTACTTGTACAATTTGT 60.239 38.462 9.13 7.30 0.00 2.83
4929 5388 6.140110 CGTCCTGGTTTACTTGTACAATTTG 58.860 40.000 9.13 0.00 0.00 2.32
4930 5389 5.824097 ACGTCCTGGTTTACTTGTACAATTT 59.176 36.000 9.13 1.90 0.00 1.82
4931 5390 5.237779 CACGTCCTGGTTTACTTGTACAATT 59.762 40.000 9.13 6.20 0.00 2.32
4932 5391 4.753107 CACGTCCTGGTTTACTTGTACAAT 59.247 41.667 9.13 2.49 0.00 2.71
4933 5392 4.121317 CACGTCCTGGTTTACTTGTACAA 58.879 43.478 8.28 8.28 0.00 2.41
4934 5393 3.384146 TCACGTCCTGGTTTACTTGTACA 59.616 43.478 0.00 0.00 0.00 2.90
4935 5394 3.981211 TCACGTCCTGGTTTACTTGTAC 58.019 45.455 0.00 0.00 0.00 2.90
4936 5395 3.890756 TCTCACGTCCTGGTTTACTTGTA 59.109 43.478 0.00 0.00 0.00 2.41
4937 5396 2.696707 TCTCACGTCCTGGTTTACTTGT 59.303 45.455 0.00 0.00 0.00 3.16
4938 5397 3.057734 GTCTCACGTCCTGGTTTACTTG 58.942 50.000 0.00 0.00 0.00 3.16
4939 5398 2.696707 TGTCTCACGTCCTGGTTTACTT 59.303 45.455 0.00 0.00 0.00 2.24
4940 5399 2.313317 TGTCTCACGTCCTGGTTTACT 58.687 47.619 0.00 0.00 0.00 2.24
4941 5400 2.806608 TGTCTCACGTCCTGGTTTAC 57.193 50.000 0.00 0.00 0.00 2.01
4942 5401 4.679639 GCATATGTCTCACGTCCTGGTTTA 60.680 45.833 4.29 0.00 0.00 2.01
4943 5402 3.861840 CATATGTCTCACGTCCTGGTTT 58.138 45.455 0.00 0.00 0.00 3.27
4944 5403 2.418746 GCATATGTCTCACGTCCTGGTT 60.419 50.000 4.29 0.00 0.00 3.67
4945 5404 1.137086 GCATATGTCTCACGTCCTGGT 59.863 52.381 4.29 0.00 0.00 4.00
4946 5405 1.858091 GCATATGTCTCACGTCCTGG 58.142 55.000 4.29 0.00 0.00 4.45
4947 5406 1.202302 ACGCATATGTCTCACGTCCTG 60.202 52.381 4.29 0.00 29.64 3.86
4948 5407 1.103803 ACGCATATGTCTCACGTCCT 58.896 50.000 4.29 0.00 29.64 3.85
4949 5408 1.200483 CACGCATATGTCTCACGTCC 58.800 55.000 4.29 0.00 34.19 4.79
4950 5409 1.909376 ACACGCATATGTCTCACGTC 58.091 50.000 4.29 0.00 34.19 4.34
4951 5410 3.497297 TTACACGCATATGTCTCACGT 57.503 42.857 4.29 2.02 37.47 4.49
4952 5411 3.857665 ACTTTACACGCATATGTCTCACG 59.142 43.478 4.29 1.35 33.85 4.35
4953 5412 5.779806 AACTTTACACGCATATGTCTCAC 57.220 39.130 4.29 0.00 33.85 3.51
4954 5413 5.929415 TGAAACTTTACACGCATATGTCTCA 59.071 36.000 4.29 0.00 33.85 3.27
4955 5414 6.403333 TGAAACTTTACACGCATATGTCTC 57.597 37.500 4.29 0.00 33.85 3.36
4956 5415 5.351465 CCTGAAACTTTACACGCATATGTCT 59.649 40.000 4.29 0.00 33.85 3.41
4957 5416 5.350365 TCCTGAAACTTTACACGCATATGTC 59.650 40.000 4.29 0.00 33.85 3.06
4958 5417 5.242434 TCCTGAAACTTTACACGCATATGT 58.758 37.500 4.29 0.00 36.56 2.29
4959 5418 5.794687 TCCTGAAACTTTACACGCATATG 57.205 39.130 0.00 0.00 0.00 1.78
4960 5419 6.112734 TCATCCTGAAACTTTACACGCATAT 58.887 36.000 0.00 0.00 0.00 1.78
4961 5420 5.483811 TCATCCTGAAACTTTACACGCATA 58.516 37.500 0.00 0.00 0.00 3.14
4962 5421 4.323417 TCATCCTGAAACTTTACACGCAT 58.677 39.130 0.00 0.00 0.00 4.73
4963 5422 3.734463 TCATCCTGAAACTTTACACGCA 58.266 40.909 0.00 0.00 0.00 5.24
4964 5423 4.742438 TTCATCCTGAAACTTTACACGC 57.258 40.909 0.00 0.00 32.71 5.34
4975 5434 6.321717 GCATTTCAACGTATTTCATCCTGAA 58.678 36.000 0.00 0.00 34.03 3.02
4976 5435 5.447144 CGCATTTCAACGTATTTCATCCTGA 60.447 40.000 0.00 0.00 0.00 3.86
4977 5436 4.730042 CGCATTTCAACGTATTTCATCCTG 59.270 41.667 0.00 0.00 0.00 3.86
4978 5437 4.634004 TCGCATTTCAACGTATTTCATCCT 59.366 37.500 0.00 0.00 0.00 3.24
4979 5438 4.904116 TCGCATTTCAACGTATTTCATCC 58.096 39.130 0.00 0.00 0.00 3.51
4980 5439 7.008266 ACAAATCGCATTTCAACGTATTTCATC 59.992 33.333 0.00 0.00 0.00 2.92
4981 5440 6.806249 ACAAATCGCATTTCAACGTATTTCAT 59.194 30.769 0.00 0.00 0.00 2.57
4982 5441 6.146216 ACAAATCGCATTTCAACGTATTTCA 58.854 32.000 0.00 0.00 0.00 2.69
4983 5442 6.611380 ACAAATCGCATTTCAACGTATTTC 57.389 33.333 0.00 0.00 0.00 2.17
4984 5443 7.965655 TCATACAAATCGCATTTCAACGTATTT 59.034 29.630 0.00 0.00 0.00 1.40
4985 5444 7.468441 TCATACAAATCGCATTTCAACGTATT 58.532 30.769 0.00 0.00 0.00 1.89
4986 5445 7.010697 TCATACAAATCGCATTTCAACGTAT 57.989 32.000 0.00 0.00 0.00 3.06
4987 5446 6.410243 TCATACAAATCGCATTTCAACGTA 57.590 33.333 0.00 0.00 0.00 3.57
4988 5447 5.289917 TCATACAAATCGCATTTCAACGT 57.710 34.783 0.00 0.00 0.00 3.99
4989 5448 6.609907 TTTCATACAAATCGCATTTCAACG 57.390 33.333 0.00 0.00 0.00 4.10
4990 5449 8.155923 GTCTTTTCATACAAATCGCATTTCAAC 58.844 33.333 0.00 0.00 0.00 3.18
4991 5450 7.864882 TGTCTTTTCATACAAATCGCATTTCAA 59.135 29.630 0.00 0.00 0.00 2.69
4992 5451 7.366513 TGTCTTTTCATACAAATCGCATTTCA 58.633 30.769 0.00 0.00 0.00 2.69
4993 5452 7.795431 TGTCTTTTCATACAAATCGCATTTC 57.205 32.000 0.00 0.00 0.00 2.17
4994 5453 8.586570 TTTGTCTTTTCATACAAATCGCATTT 57.413 26.923 0.00 0.00 39.88 2.32
5002 5461 9.474920 GACCATGAATTTGTCTTTTCATACAAA 57.525 29.630 0.00 3.40 46.37 2.83
5003 5462 8.859090 AGACCATGAATTTGTCTTTTCATACAA 58.141 29.630 0.00 0.00 39.84 2.41
5004 5463 8.408043 AGACCATGAATTTGTCTTTTCATACA 57.592 30.769 0.00 0.00 39.84 2.29
5005 5464 9.132521 CAAGACCATGAATTTGTCTTTTCATAC 57.867 33.333 10.49 0.00 44.63 2.39
5006 5465 9.076781 TCAAGACCATGAATTTGTCTTTTCATA 57.923 29.630 10.49 0.00 44.63 2.15
5007 5466 7.954835 TCAAGACCATGAATTTGTCTTTTCAT 58.045 30.769 10.49 0.00 44.63 2.57
5008 5467 7.345422 TCAAGACCATGAATTTGTCTTTTCA 57.655 32.000 10.49 0.00 44.63 2.69
5009 5468 8.137437 TCTTCAAGACCATGAATTTGTCTTTTC 58.863 33.333 10.49 0.00 44.63 2.29
5010 5469 8.010733 TCTTCAAGACCATGAATTTGTCTTTT 57.989 30.769 10.49 0.00 44.63 2.27
5011 5470 7.587037 TCTTCAAGACCATGAATTTGTCTTT 57.413 32.000 10.49 0.00 44.63 2.52
5013 5472 7.449395 TCATTCTTCAAGACCATGAATTTGTCT 59.551 33.333 0.00 0.00 40.94 3.41
5014 5473 7.596494 TCATTCTTCAAGACCATGAATTTGTC 58.404 34.615 0.00 0.00 38.55 3.18
5015 5474 7.528996 TCATTCTTCAAGACCATGAATTTGT 57.471 32.000 0.00 0.00 38.55 2.83
5016 5475 8.997621 ATTCATTCTTCAAGACCATGAATTTG 57.002 30.769 16.77 0.00 38.24 2.32
5072 5531 3.922171 AAAATGGGGAGTGTGCAAAAA 57.078 38.095 0.00 0.00 0.00 1.94
5073 5532 4.698575 GTTAAAATGGGGAGTGTGCAAAA 58.301 39.130 0.00 0.00 0.00 2.44
5074 5533 3.243569 CGTTAAAATGGGGAGTGTGCAAA 60.244 43.478 0.00 0.00 0.00 3.68
5075 5534 2.294791 CGTTAAAATGGGGAGTGTGCAA 59.705 45.455 0.00 0.00 0.00 4.08
5076 5535 1.883275 CGTTAAAATGGGGAGTGTGCA 59.117 47.619 0.00 0.00 0.00 4.57
5077 5536 1.883926 ACGTTAAAATGGGGAGTGTGC 59.116 47.619 0.00 0.00 0.00 4.57
5078 5537 5.890424 AATACGTTAAAATGGGGAGTGTG 57.110 39.130 0.00 0.00 0.00 3.82
5079 5538 5.122711 CGAAATACGTTAAAATGGGGAGTGT 59.877 40.000 0.00 0.00 37.22 3.55
5080 5539 5.565695 CGAAATACGTTAAAATGGGGAGTG 58.434 41.667 0.00 0.00 37.22 3.51
5081 5540 5.806366 CGAAATACGTTAAAATGGGGAGT 57.194 39.130 0.00 0.00 37.22 3.85
5099 5558 9.250624 CCAAATGTGTAAATTTTTAGGACGAAA 57.749 29.630 0.00 0.00 0.00 3.46
5100 5559 7.868415 CCCAAATGTGTAAATTTTTAGGACGAA 59.132 33.333 0.00 0.00 0.00 3.85
5101 5560 7.371936 CCCAAATGTGTAAATTTTTAGGACGA 58.628 34.615 0.00 0.00 0.00 4.20
5102 5561 6.090223 GCCCAAATGTGTAAATTTTTAGGACG 59.910 38.462 0.00 0.00 0.00 4.79
5103 5562 6.931840 TGCCCAAATGTGTAAATTTTTAGGAC 59.068 34.615 0.00 0.00 0.00 3.85
5104 5563 6.931840 GTGCCCAAATGTGTAAATTTTTAGGA 59.068 34.615 0.00 0.00 0.00 2.94
5105 5564 6.934083 AGTGCCCAAATGTGTAAATTTTTAGG 59.066 34.615 0.00 0.00 0.00 2.69
5106 5565 7.961325 AGTGCCCAAATGTGTAAATTTTTAG 57.039 32.000 0.00 0.00 0.00 1.85
5107 5566 9.429359 CATAGTGCCCAAATGTGTAAATTTTTA 57.571 29.630 0.00 0.00 0.00 1.52
5108 5567 7.094848 GCATAGTGCCCAAATGTGTAAATTTTT 60.095 33.333 0.00 0.00 37.42 1.94
5109 5568 6.371271 GCATAGTGCCCAAATGTGTAAATTTT 59.629 34.615 0.00 0.00 37.42 1.82
5110 5569 5.874261 GCATAGTGCCCAAATGTGTAAATTT 59.126 36.000 0.00 0.00 37.42 1.82
5111 5570 5.046735 TGCATAGTGCCCAAATGTGTAAATT 60.047 36.000 0.00 0.00 44.23 1.82
5112 5571 4.465660 TGCATAGTGCCCAAATGTGTAAAT 59.534 37.500 0.00 0.00 44.23 1.40
5113 5572 3.829026 TGCATAGTGCCCAAATGTGTAAA 59.171 39.130 0.00 0.00 44.23 2.01
5114 5573 3.425659 TGCATAGTGCCCAAATGTGTAA 58.574 40.909 0.00 0.00 44.23 2.41
5115 5574 3.078891 TGCATAGTGCCCAAATGTGTA 57.921 42.857 0.00 0.00 44.23 2.90
5116 5575 1.921982 TGCATAGTGCCCAAATGTGT 58.078 45.000 0.00 0.00 44.23 3.72
5117 5576 3.530265 AATGCATAGTGCCCAAATGTG 57.470 42.857 0.00 0.00 44.23 3.21
5118 5577 5.599656 AGATAAATGCATAGTGCCCAAATGT 59.400 36.000 0.00 0.00 44.23 2.71
5119 5578 6.092955 AGATAAATGCATAGTGCCCAAATG 57.907 37.500 0.00 0.00 44.23 2.32
5120 5579 7.892241 AGATAGATAAATGCATAGTGCCCAAAT 59.108 33.333 0.00 0.00 44.23 2.32
5121 5580 7.233632 AGATAGATAAATGCATAGTGCCCAAA 58.766 34.615 0.00 0.00 44.23 3.28
5122 5581 6.782986 AGATAGATAAATGCATAGTGCCCAA 58.217 36.000 0.00 0.00 44.23 4.12
5123 5582 6.214208 AGAGATAGATAAATGCATAGTGCCCA 59.786 38.462 0.00 0.00 44.23 5.36
5124 5583 6.648192 AGAGATAGATAAATGCATAGTGCCC 58.352 40.000 0.00 0.00 44.23 5.36
5125 5584 9.829507 AATAGAGATAGATAAATGCATAGTGCC 57.170 33.333 0.00 0.00 44.23 5.01
5202 5661 9.370930 TCCATGCAGATCTCCAAATATAAATTT 57.629 29.630 0.00 0.00 35.65 1.82
5203 5662 8.945195 TCCATGCAGATCTCCAAATATAAATT 57.055 30.769 0.00 0.00 0.00 1.82
5204 5663 7.122353 GCTCCATGCAGATCTCCAAATATAAAT 59.878 37.037 0.00 0.00 42.31 1.40
5205 5664 6.432162 GCTCCATGCAGATCTCCAAATATAAA 59.568 38.462 0.00 0.00 42.31 1.40
5206 5665 5.942236 GCTCCATGCAGATCTCCAAATATAA 59.058 40.000 0.00 0.00 42.31 0.98
5207 5666 5.250082 AGCTCCATGCAGATCTCCAAATATA 59.750 40.000 0.00 0.00 45.94 0.86
5208 5667 4.043059 AGCTCCATGCAGATCTCCAAATAT 59.957 41.667 0.00 0.00 45.94 1.28
5209 5668 3.393609 AGCTCCATGCAGATCTCCAAATA 59.606 43.478 0.00 0.00 45.94 1.40
5210 5669 2.175069 AGCTCCATGCAGATCTCCAAAT 59.825 45.455 0.00 0.00 45.94 2.32
5211 5670 1.562942 AGCTCCATGCAGATCTCCAAA 59.437 47.619 0.00 0.00 45.94 3.28
5212 5671 1.140452 GAGCTCCATGCAGATCTCCAA 59.860 52.381 0.87 0.00 45.94 3.53
5213 5672 0.757512 GAGCTCCATGCAGATCTCCA 59.242 55.000 0.87 0.00 45.94 3.86
5214 5673 0.319727 CGAGCTCCATGCAGATCTCC 60.320 60.000 8.47 0.00 45.94 3.71
5215 5674 0.672889 TCGAGCTCCATGCAGATCTC 59.327 55.000 8.47 0.00 45.94 2.75
5216 5675 1.273048 GATCGAGCTCCATGCAGATCT 59.727 52.381 8.47 0.00 45.61 2.75
5217 5676 1.712401 GATCGAGCTCCATGCAGATC 58.288 55.000 8.47 9.49 44.29 2.75
5218 5677 1.340088 AGATCGAGCTCCATGCAGAT 58.660 50.000 8.47 3.56 45.94 2.90
5219 5678 1.068281 GAAGATCGAGCTCCATGCAGA 59.932 52.381 2.43 0.00 45.94 4.26
5220 5679 1.202498 TGAAGATCGAGCTCCATGCAG 60.202 52.381 2.43 0.00 45.94 4.41
5221 5680 0.826062 TGAAGATCGAGCTCCATGCA 59.174 50.000 2.43 0.00 45.94 3.96
5222 5681 1.945387 TTGAAGATCGAGCTCCATGC 58.055 50.000 2.43 0.00 43.29 4.06
5223 5682 3.242673 GCTTTTGAAGATCGAGCTCCATG 60.243 47.826 2.43 0.00 0.00 3.66
5224 5683 2.941720 GCTTTTGAAGATCGAGCTCCAT 59.058 45.455 2.43 0.00 0.00 3.41
5225 5684 2.289631 TGCTTTTGAAGATCGAGCTCCA 60.290 45.455 2.43 0.00 34.56 3.86
5226 5685 2.350522 TGCTTTTGAAGATCGAGCTCC 58.649 47.619 2.43 0.00 34.56 4.70
5227 5686 4.612932 ATTGCTTTTGAAGATCGAGCTC 57.387 40.909 2.43 2.73 34.56 4.09
5228 5687 5.382618 AAATTGCTTTTGAAGATCGAGCT 57.617 34.783 0.00 0.00 34.56 4.09
5229 5688 4.560427 GGAAATTGCTTTTGAAGATCGAGC 59.440 41.667 0.00 0.00 0.00 5.03
5230 5689 4.790140 CGGAAATTGCTTTTGAAGATCGAG 59.210 41.667 0.00 0.00 0.00 4.04
5231 5690 4.722194 CGGAAATTGCTTTTGAAGATCGA 58.278 39.130 0.00 0.00 0.00 3.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.