Multiple sequence alignment - TraesCS1A01G375600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G375600 chr1A 100.000 4359 0 0 1 4359 550315347 550310989 0.000000e+00 8050
1 TraesCS1A01G375600 chr1A 88.542 288 31 2 2732 3017 550215728 550215441 8.970000e-92 348
2 TraesCS1A01G375600 chr1A 85.294 340 43 4 11 350 285980098 285980430 1.160000e-90 344
3 TraesCS1A01G375600 chr1A 96.135 207 6 1 4089 4293 550306088 550305882 1.940000e-88 337
4 TraesCS1A01G375600 chr1A 94.686 207 7 3 4089 4291 544947631 544947425 7.030000e-83 318
5 TraesCS1A01G375600 chr1A 81.765 340 30 12 3188 3512 550215445 550215123 5.590000e-64 255
6 TraesCS1A01G375600 chr1A 79.352 247 35 11 3772 4003 550213043 550212798 4.510000e-35 159
7 TraesCS1A01G375600 chr1D 95.115 2395 79 20 1540 3915 457851715 457849340 0.000000e+00 3740
8 TraesCS1A01G375600 chr1D 90.732 1079 40 34 405 1441 457852798 457851738 0.000000e+00 1384
9 TraesCS1A01G375600 chr1B 94.424 2206 68 16 1740 3917 627928520 627926342 0.000000e+00 3341
10 TraesCS1A01G375600 chr1B 82.517 1716 158 72 1 1640 627930171 627928522 0.000000e+00 1376
11 TraesCS1A01G375600 chr1B 82.062 485 49 12 3537 4000 627890427 627889960 3.180000e-101 379
12 TraesCS1A01G375600 chr1B 90.650 246 17 5 4118 4359 328652478 328652721 5.440000e-84 322
13 TraesCS1A01G375600 chr1B 78.033 478 59 20 3541 4001 627797361 627796913 4.320000e-65 259
14 TraesCS1A01G375600 chr1B 84.475 219 21 8 3303 3508 627890647 627890429 2.060000e-48 204
15 TraesCS1A01G375600 chr1B 92.929 99 6 1 3917 4014 627926240 627926142 4.540000e-30 143
16 TraesCS1A01G375600 chr6A 87.273 330 39 1 11 340 540151415 540151741 1.480000e-99 374
17 TraesCS1A01G375600 chr6A 79.195 298 30 17 3187 3463 99421901 99421615 1.250000e-40 178
18 TraesCS1A01G375600 chr5D 86.431 339 41 3 11 349 505371899 505371566 2.480000e-97 366
19 TraesCS1A01G375600 chr5D 85.088 342 45 4 11 350 318867606 318867943 1.160000e-90 344
20 TraesCS1A01G375600 chr5D 81.818 231 38 4 1108 1336 461440849 461440621 1.600000e-44 191
21 TraesCS1A01G375600 chr7B 86.431 339 38 5 14 350 104298665 104298333 8.910000e-97 364
22 TraesCS1A01G375600 chr7B 86.331 278 25 9 4091 4359 735300005 735299732 1.530000e-74 291
23 TraesCS1A01G375600 chr4D 86.544 327 41 1 16 342 483171471 483171794 1.490000e-94 357
24 TraesCS1A01G375600 chr4D 89.823 226 23 0 1111 1336 447639112 447639337 1.530000e-74 291
25 TraesCS1A01G375600 chr5A 86.145 332 43 1 11 342 663323165 663323493 5.360000e-94 355
26 TraesCS1A01G375600 chr5A 81.304 230 41 2 1108 1336 581488149 581487921 7.440000e-43 185
27 TraesCS1A01G375600 chr4A 90.146 274 21 5 4089 4359 704612438 704612708 6.940000e-93 351
28 TraesCS1A01G375600 chr4A 88.987 227 25 0 1111 1337 19622533 19622307 9.230000e-72 281
29 TraesCS1A01G375600 chr4A 90.909 209 14 3 4089 4292 704617376 704617584 4.290000e-70 276
30 TraesCS1A01G375600 chr2A 85.928 334 39 6 11 342 11305224 11305551 2.490000e-92 350
31 TraesCS1A01G375600 chr7A 85.294 340 45 4 11 350 393325414 393325748 3.230000e-91 346
32 TraesCS1A01G375600 chr3B 91.250 240 16 3 4125 4359 810681975 810682214 5.440000e-84 322
33 TraesCS1A01G375600 chr3B 90.233 215 15 4 4089 4298 810698415 810698628 4.290000e-70 276
34 TraesCS1A01G375600 chr7D 86.957 276 26 9 4090 4359 27281883 27282154 7.080000e-78 302
35 TraesCS1A01G375600 chr4B 89.427 227 24 0 1111 1337 560012808 560013034 1.980000e-73 287
36 TraesCS1A01G375600 chr6B 77.681 345 41 18 3187 3509 157666105 157666435 1.250000e-40 178
37 TraesCS1A01G375600 chr6D 76.923 325 40 20 3187 3491 82640085 82640394 7.550000e-33 152
38 TraesCS1A01G375600 chr3D 81.818 187 28 6 1149 1332 388534452 388534269 7.550000e-33 152
39 TraesCS1A01G375600 chr3A 81.283 187 29 6 1149 1332 509798927 509798744 3.510000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G375600 chr1A 550310989 550315347 4358 True 8050.0 8050 100.000000 1 4359 1 chr1A.!!$R3 4358
1 TraesCS1A01G375600 chr1A 550212798 550215728 2930 True 254.0 348 83.219667 2732 4003 3 chr1A.!!$R4 1271
2 TraesCS1A01G375600 chr1D 457849340 457852798 3458 True 2562.0 3740 92.923500 405 3915 2 chr1D.!!$R1 3510
3 TraesCS1A01G375600 chr1B 627926142 627930171 4029 True 1620.0 3341 89.956667 1 4014 3 chr1B.!!$R3 4013
4 TraesCS1A01G375600 chr1B 627889960 627890647 687 True 291.5 379 83.268500 3303 4000 2 chr1B.!!$R2 697

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
131 132 0.033090 CTGCTGCGCTGATCCTATGA 59.967 55.000 19.32 0.0 0.00 2.15 F
1350 1421 0.333312 TGAGTCAGAGTCTCCCTCCC 59.667 60.000 6.81 0.0 41.47 4.30 F
1356 1427 1.000646 GAGTCTCCCTCCCGTGTCT 60.001 63.158 0.00 0.0 33.79 3.41 F
2175 2302 1.123077 TGCCTTGTGACTGTCTCTGT 58.877 50.000 9.51 0.0 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1881 1990 0.035458 TCCACACACACACACACACA 59.965 50.000 0.0 0.0 0.00 3.72 R
2866 2994 0.179073 TAGCTCTGCCCAGAAATCGC 60.179 55.000 0.0 0.0 36.94 4.58 R
2968 3097 1.555075 TCAGATACCCCAACTGCTGAC 59.445 52.381 0.0 0.0 0.00 3.51 R
4043 6170 0.098200 GCCCCGCAGTTTCGATAAAC 59.902 55.000 0.0 0.0 44.47 2.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.787953 TTTGTTTCTGATGGATTTGCTCA 57.212 34.783 0.00 0.00 0.00 4.26
28 29 5.713389 TGTTTCTGATGGATTTGCTCAGATT 59.287 36.000 2.63 0.00 43.50 2.40
46 47 4.792189 CAGATTTGGTCGTAGTTCGTCTAC 59.208 45.833 9.32 9.32 43.87 2.59
62 63 6.442487 TCGTCTACGTTCATGTGTTTTTAG 57.558 37.500 0.00 0.00 40.80 1.85
66 67 7.096106 CGTCTACGTTCATGTGTTTTTAGGTTA 60.096 37.037 0.00 0.00 34.11 2.85
71 72 7.442969 ACGTTCATGTGTTTTTAGGTTAGATCA 59.557 33.333 0.00 0.00 0.00 2.92
93 94 3.189618 TCCGATCTACGCTACTCTTCA 57.810 47.619 0.00 0.00 41.07 3.02
101 102 1.437986 GCTACTCTTCATCGGCGGT 59.562 57.895 7.21 0.00 0.00 5.68
102 103 0.872021 GCTACTCTTCATCGGCGGTG 60.872 60.000 15.31 15.31 0.00 4.94
106 107 0.174845 CTCTTCATCGGCGGTGGTTA 59.825 55.000 21.45 5.36 0.00 2.85
109 110 0.390603 TTCATCGGCGGTGGTTACTG 60.391 55.000 21.45 0.00 36.22 2.74
123 124 0.033366 TTACTGTTCTGCTGCGCTGA 59.967 50.000 19.32 3.68 34.87 4.26
128 129 0.179100 GTTCTGCTGCGCTGATCCTA 60.179 55.000 19.32 0.00 36.48 2.94
131 132 0.033090 CTGCTGCGCTGATCCTATGA 59.967 55.000 19.32 0.00 0.00 2.15
134 135 1.934399 GCTGCGCTGATCCTATGAGAC 60.934 57.143 19.32 0.00 0.00 3.36
139 140 3.194542 GCGCTGATCCTATGAGACCTTAT 59.805 47.826 0.00 0.00 0.00 1.73
145 146 7.147689 GCTGATCCTATGAGACCTTATCATGAT 60.148 40.741 13.81 13.81 37.91 2.45
151 152 7.818446 CCTATGAGACCTTATCATGATGACTTG 59.182 40.741 18.72 4.95 37.91 3.16
174 175 4.326548 GCCGACTGTCTAATACAACAAGTC 59.673 45.833 6.21 0.00 37.74 3.01
177 178 6.089551 CCGACTGTCTAATACAACAAGTCTTG 59.910 42.308 11.17 11.17 37.74 3.02
185 187 1.600916 AACAAGTCTTGCCCGGCTC 60.601 57.895 12.66 0.00 0.00 4.70
207 209 1.815421 CGAGGGAAGGGCAATGACG 60.815 63.158 0.00 0.00 0.00 4.35
234 236 1.332178 GTCTTCGTCTCGCTTCAGTG 58.668 55.000 0.00 0.00 0.00 3.66
235 237 0.952280 TCTTCGTCTCGCTTCAGTGT 59.048 50.000 0.00 0.00 0.00 3.55
239 241 1.202371 TCGTCTCGCTTCAGTGTTTGT 60.202 47.619 0.00 0.00 0.00 2.83
242 244 3.381949 GTCTCGCTTCAGTGTTTGTAGT 58.618 45.455 0.00 0.00 0.00 2.73
246 248 2.153247 CGCTTCAGTGTTTGTAGTCGTC 59.847 50.000 0.00 0.00 0.00 4.20
248 250 1.762419 TCAGTGTTTGTAGTCGTCGC 58.238 50.000 0.00 0.00 0.00 5.19
251 253 3.189910 TCAGTGTTTGTAGTCGTCGCTAT 59.810 43.478 0.00 0.00 0.00 2.97
274 276 7.849804 ATGTGGTCTACAGATTTGAATGTAC 57.150 36.000 0.00 0.00 43.80 2.90
275 277 7.004555 TGTGGTCTACAGATTTGAATGTACT 57.995 36.000 0.00 0.00 33.42 2.73
277 279 8.590204 TGTGGTCTACAGATTTGAATGTACTAA 58.410 33.333 0.00 0.00 33.42 2.24
315 319 6.403049 TGATGTTCGTTGTACTACCATGATT 58.597 36.000 0.00 0.00 0.00 2.57
316 320 7.548967 TGATGTTCGTTGTACTACCATGATTA 58.451 34.615 0.00 0.00 0.00 1.75
359 363 9.565090 AAGTTTTCTAAGAAAAAGTATACGGGT 57.435 29.630 0.00 0.00 32.75 5.28
363 367 9.558396 TTTCTAAGAAAAAGTATACGGGTTTGA 57.442 29.630 0.00 0.00 0.00 2.69
364 368 8.538409 TCTAAGAAAAAGTATACGGGTTTGAC 57.462 34.615 0.00 0.03 0.00 3.18
365 369 8.370182 TCTAAGAAAAAGTATACGGGTTTGACT 58.630 33.333 0.00 1.97 0.00 3.41
366 370 7.430992 AAGAAAAAGTATACGGGTTTGACTC 57.569 36.000 0.00 0.00 0.00 3.36
367 371 6.527423 AGAAAAAGTATACGGGTTTGACTCA 58.473 36.000 0.00 0.00 0.00 3.41
368 372 7.166167 AGAAAAAGTATACGGGTTTGACTCAT 58.834 34.615 0.00 0.00 0.00 2.90
369 373 6.980051 AAAAGTATACGGGTTTGACTCATC 57.020 37.500 0.00 0.00 0.00 2.92
370 374 5.670792 AAGTATACGGGTTTGACTCATCA 57.329 39.130 0.00 0.00 0.00 3.07
371 375 5.670792 AGTATACGGGTTTGACTCATCAA 57.329 39.130 0.00 0.00 43.28 2.57
384 388 4.627035 TGACTCATCAAAGATACAAGTGCG 59.373 41.667 0.00 0.00 0.00 5.34
432 436 2.733593 GGCAGACGACACGACCAC 60.734 66.667 0.00 0.00 0.00 4.16
433 437 2.733593 GCAGACGACACGACCACC 60.734 66.667 0.00 0.00 0.00 4.61
480 500 1.095807 AGAAAAATCTAGCCCGCGCC 61.096 55.000 0.00 0.00 34.57 6.53
804 838 5.955355 CCCTCATTTCTTTACCCACCATTTA 59.045 40.000 0.00 0.00 0.00 1.40
891 944 4.982701 AGCAGGGCTGGTTGGTGC 62.983 66.667 0.00 0.00 38.24 5.01
954 1007 1.482593 TCTTTCTTCTCGGGCCTGATC 59.517 52.381 16.52 0.00 0.00 2.92
962 1015 2.822399 GGGCCTGATCCGATTCGT 59.178 61.111 0.84 0.00 0.00 3.85
963 1016 1.595382 GGGCCTGATCCGATTCGTG 60.595 63.158 0.84 0.00 0.00 4.35
964 1017 2.247437 GGCCTGATCCGATTCGTGC 61.247 63.158 5.20 0.00 0.00 5.34
965 1018 1.227380 GCCTGATCCGATTCGTGCT 60.227 57.895 5.20 0.00 0.00 4.40
966 1019 1.218230 GCCTGATCCGATTCGTGCTC 61.218 60.000 5.20 0.00 0.00 4.26
1336 1395 3.257393 CAGCTCAACACCTATGTGAGTC 58.743 50.000 5.05 0.00 45.76 3.36
1337 1396 2.899900 AGCTCAACACCTATGTGAGTCA 59.100 45.455 5.05 0.00 45.76 3.41
1338 1397 3.056250 AGCTCAACACCTATGTGAGTCAG 60.056 47.826 5.05 0.00 45.76 3.51
1339 1398 3.056536 GCTCAACACCTATGTGAGTCAGA 60.057 47.826 5.05 0.00 45.76 3.27
1340 1399 4.742417 CTCAACACCTATGTGAGTCAGAG 58.258 47.826 5.05 0.00 45.76 3.35
1341 1400 4.152647 TCAACACCTATGTGAGTCAGAGT 58.847 43.478 5.05 0.00 45.76 3.24
1343 1402 4.040936 ACACCTATGTGAGTCAGAGTCT 57.959 45.455 5.05 0.00 45.76 3.24
1350 1421 0.333312 TGAGTCAGAGTCTCCCTCCC 59.667 60.000 6.81 0.00 41.47 4.30
1356 1427 1.000646 GAGTCTCCCTCCCGTGTCT 60.001 63.158 0.00 0.00 33.79 3.41
1367 1438 1.300971 CCCGTGTCTTGGTGCTGATG 61.301 60.000 0.00 0.00 0.00 3.07
1368 1439 1.499056 CGTGTCTTGGTGCTGATGC 59.501 57.895 0.00 0.00 40.20 3.91
1405 1485 7.377766 TCTTAGTCATGGTGCTAATTTGTTC 57.622 36.000 0.00 0.00 0.00 3.18
1415 1495 8.050778 TGGTGCTAATTTGTTCTGGTAATAAG 57.949 34.615 0.00 0.00 0.00 1.73
1423 1503 3.461831 TGTTCTGGTAATAAGGGGATGGG 59.538 47.826 0.00 0.00 0.00 4.00
1426 1506 3.060611 CTGGTAATAAGGGGATGGGGAA 58.939 50.000 0.00 0.00 0.00 3.97
1433 1513 2.198334 AGGGGATGGGGAAGTAGAAG 57.802 55.000 0.00 0.00 0.00 2.85
1441 1521 5.163509 GGATGGGGAAGTAGAAGCATTTTTC 60.164 44.000 0.00 0.00 0.00 2.29
1442 1522 4.998051 TGGGGAAGTAGAAGCATTTTTCT 58.002 39.130 0.00 0.00 40.39 2.52
1443 1523 4.766891 TGGGGAAGTAGAAGCATTTTTCTG 59.233 41.667 0.00 0.00 37.91 3.02
1444 1524 4.380973 GGGGAAGTAGAAGCATTTTTCTGC 60.381 45.833 0.00 0.00 42.62 4.26
1467 1555 8.076714 TGCTAGTTAATTATTCGATCTTGCTG 57.923 34.615 0.00 0.00 0.00 4.41
1473 1561 8.737648 GTTAATTATTCGATCTTGCTGCTTTTC 58.262 33.333 0.00 0.00 0.00 2.29
1478 1567 2.159599 CGATCTTGCTGCTTTTCTGTCC 60.160 50.000 0.00 0.00 0.00 4.02
1486 1575 3.405831 CTGCTTTTCTGTCCTGTCATGA 58.594 45.455 0.00 0.00 0.00 3.07
1505 1594 5.299782 TCATGACTGCAATTAAGCATATGCA 59.700 36.000 28.62 9.60 44.68 3.96
1507 1596 5.765176 TGACTGCAATTAAGCATATGCATC 58.235 37.500 28.62 6.08 46.59 3.91
1513 1602 6.477360 TGCAATTAAGCATATGCATCTTTGTG 59.523 34.615 28.62 17.07 43.32 3.33
1518 1607 9.740239 ATTAAGCATATGCATCTTTGTGTTAAG 57.260 29.630 28.62 0.00 45.16 1.85
1522 1611 7.337689 AGCATATGCATCTTTGTGTTAAGAAGA 59.662 33.333 28.62 0.00 45.16 2.87
1528 1617 3.807622 TCTTTGTGTTAAGAAGACGGCAG 59.192 43.478 0.00 0.00 31.45 4.85
1534 1623 4.332819 GTGTTAAGAAGACGGCAGCATATT 59.667 41.667 0.00 0.00 0.00 1.28
1535 1624 4.570772 TGTTAAGAAGACGGCAGCATATTC 59.429 41.667 0.00 0.00 0.00 1.75
1536 1625 1.858091 AGAAGACGGCAGCATATTCG 58.142 50.000 0.00 0.00 0.00 3.34
1537 1626 1.137086 AGAAGACGGCAGCATATTCGT 59.863 47.619 0.00 0.00 38.62 3.85
1538 1627 1.258982 GAAGACGGCAGCATATTCGTG 59.741 52.381 0.00 0.00 35.91 4.35
1546 1648 3.848846 CAGCATATTCGTGTGTAGCTG 57.151 47.619 0.00 0.00 41.45 4.24
1551 1653 4.499188 GCATATTCGTGTGTAGCTGGTCTA 60.499 45.833 0.00 0.00 0.00 2.59
1560 1662 5.020795 TGTGTAGCTGGTCTAGGTAAATCA 58.979 41.667 0.00 0.00 40.78 2.57
1574 1676 5.198965 AGGTAAATCAGCAGCATTTCAGAT 58.801 37.500 0.00 0.00 0.00 2.90
1577 1679 6.914757 GGTAAATCAGCAGCATTTCAGATAAC 59.085 38.462 0.00 0.00 0.00 1.89
1651 1753 6.611642 AGGGTAATGCTCTGATAACTGAACTA 59.388 38.462 0.00 0.00 0.00 2.24
1811 1918 3.604875 TTAAGCCAGCCACTAGTGTAC 57.395 47.619 21.18 12.87 0.00 2.90
1821 1928 3.751518 CCACTAGTGTACAAGGGCTTTT 58.248 45.455 21.18 0.00 0.00 2.27
1833 1940 4.248058 CAAGGGCTTTTCAGCTTTAATGG 58.752 43.478 0.00 0.00 46.44 3.16
1883 1992 8.896320 TTAACATTGTACTGTACTGATTGTGT 57.104 30.769 17.98 10.58 0.00 3.72
1884 1993 6.785488 ACATTGTACTGTACTGATTGTGTG 57.215 37.500 17.98 8.13 0.00 3.82
1885 1994 6.288294 ACATTGTACTGTACTGATTGTGTGT 58.712 36.000 17.98 8.62 0.00 3.72
1886 1995 6.202762 ACATTGTACTGTACTGATTGTGTGTG 59.797 38.462 17.98 4.44 0.00 3.82
2070 2183 5.958380 AGATACTGGATGAAGTACAGGAACA 59.042 40.000 0.00 0.00 43.63 3.18
2170 2297 1.267806 CCATGTTGCCTTGTGACTGTC 59.732 52.381 0.00 0.00 0.00 3.51
2171 2298 2.224606 CATGTTGCCTTGTGACTGTCT 58.775 47.619 9.51 0.00 0.00 3.41
2172 2299 1.953559 TGTTGCCTTGTGACTGTCTC 58.046 50.000 9.51 6.13 0.00 3.36
2173 2300 1.486310 TGTTGCCTTGTGACTGTCTCT 59.514 47.619 9.51 0.00 0.00 3.10
2174 2301 1.869767 GTTGCCTTGTGACTGTCTCTG 59.130 52.381 9.51 3.47 0.00 3.35
2175 2302 1.123077 TGCCTTGTGACTGTCTCTGT 58.877 50.000 9.51 0.00 0.00 3.41
2311 2438 3.520569 GTCAGAGGCATCTTCTCAAGAC 58.479 50.000 0.00 0.00 41.01 3.01
2591 2718 2.413837 CGTAACCCACACTTCTTCCAG 58.586 52.381 0.00 0.00 0.00 3.86
2630 2757 5.738909 CAAGATAAGAGGAAGGAGCTTGAA 58.261 41.667 0.00 0.00 34.89 2.69
2693 2820 1.479709 CATTTTATGGTTCGGGGGCA 58.520 50.000 0.00 0.00 0.00 5.36
2768 2895 3.077359 CCTCAGTGAACCTGGAATGAAC 58.923 50.000 0.00 0.00 41.83 3.18
2858 2986 3.833304 GCTAATGGGCAGCTGGAC 58.167 61.111 17.12 0.00 36.07 4.02
2866 2994 1.310933 GGGCAGCTGGACATCAACAG 61.311 60.000 17.12 0.00 37.76 3.16
2908 3037 7.201644 GCTATTTTCTGATGATTTTGGAGACGA 60.202 37.037 0.00 0.00 0.00 4.20
2968 3097 4.039730 ACCTGAAGATATCGATGAACTGGG 59.960 45.833 8.54 9.80 0.00 4.45
3108 3237 9.607988 ACAATCTGGTATATTTCGTGTTCAATA 57.392 29.630 0.00 0.00 0.00 1.90
3257 3386 6.152379 GGATCTTTGAGAACATGGTTGAAAC 58.848 40.000 0.00 0.00 0.00 2.78
3279 3408 5.079643 ACCTACATGCCTGTTTTCATTCTT 58.920 37.500 0.00 0.00 36.79 2.52
3290 3419 5.531634 TGTTTTCATTCTTGATTGGTCTGC 58.468 37.500 0.00 0.00 0.00 4.26
3401 5351 0.178068 CTGAGGTGTTCCATACCGGG 59.822 60.000 6.32 0.00 43.06 5.73
3423 5386 1.358152 TTGGAACACCTCTGGGTAGG 58.642 55.000 0.00 0.00 45.41 3.18
3480 5443 0.035881 CTGCCTCTCTCCACTTGCAA 59.964 55.000 0.00 0.00 0.00 4.08
3496 5459 6.144402 CCACTTGCAAAAGTCATGTCATTTAC 59.856 38.462 0.00 0.00 0.00 2.01
3515 5478 8.889717 TCATTTACGAATTGTTCTAGAATTCCC 58.110 33.333 8.75 0.00 36.75 3.97
3620 5588 7.332678 GTGTATTGAATGGTTACCTAAACTCGT 59.667 37.037 2.07 0.00 38.23 4.18
3645 5616 4.026744 CTCTGAAGAAGATGGTCCAGGTA 58.973 47.826 0.00 0.00 33.29 3.08
3662 5634 2.298163 AGGTAGTCGACATTCGGTTGTT 59.702 45.455 19.50 0.00 40.88 2.83
3727 5699 4.940463 TGTATATACTCGTTGGGTGAAGC 58.060 43.478 13.89 0.00 0.00 3.86
3780 5782 1.678970 GGCATCTGGGTGTGGGTTC 60.679 63.158 0.00 0.00 0.00 3.62
3794 5796 3.138283 TGTGGGTTCAGTCATTTCTCCTT 59.862 43.478 0.00 0.00 0.00 3.36
3799 5801 3.340814 TCAGTCATTTCTCCTTCTGCC 57.659 47.619 0.00 0.00 0.00 4.85
3866 5872 4.024556 GTGATGATTGGTAGTGTATGCTGC 60.025 45.833 0.00 0.00 0.00 5.25
3928 6053 7.201732 CCTTTGCAAGGTACTATTGATTAGTGG 60.202 40.741 7.87 5.46 43.95 4.00
4011 6138 6.971184 GGCAGTTCTTCATCAATCATGTTTAG 59.029 38.462 0.00 0.00 33.66 1.85
4012 6139 7.362401 GGCAGTTCTTCATCAATCATGTTTAGT 60.362 37.037 0.00 0.00 33.66 2.24
4016 6143 9.346725 GTTCTTCATCAATCATGTTTAGTTTCC 57.653 33.333 0.00 0.00 33.66 3.13
4017 6144 8.868522 TCTTCATCAATCATGTTTAGTTTCCT 57.131 30.769 0.00 0.00 33.66 3.36
4018 6145 8.950210 TCTTCATCAATCATGTTTAGTTTCCTC 58.050 33.333 0.00 0.00 33.66 3.71
4019 6146 7.307493 TCATCAATCATGTTTAGTTTCCTCG 57.693 36.000 0.00 0.00 33.66 4.63
4020 6147 5.545658 TCAATCATGTTTAGTTTCCTCGC 57.454 39.130 0.00 0.00 0.00 5.03
4021 6148 5.000591 TCAATCATGTTTAGTTTCCTCGCA 58.999 37.500 0.00 0.00 0.00 5.10
4022 6149 4.946784 ATCATGTTTAGTTTCCTCGCAC 57.053 40.909 0.00 0.00 0.00 5.34
4023 6150 3.071479 TCATGTTTAGTTTCCTCGCACC 58.929 45.455 0.00 0.00 0.00 5.01
4024 6151 1.886886 TGTTTAGTTTCCTCGCACCC 58.113 50.000 0.00 0.00 0.00 4.61
4025 6152 1.418637 TGTTTAGTTTCCTCGCACCCT 59.581 47.619 0.00 0.00 0.00 4.34
4026 6153 1.804748 GTTTAGTTTCCTCGCACCCTG 59.195 52.381 0.00 0.00 0.00 4.45
4027 6154 0.321298 TTAGTTTCCTCGCACCCTGC 60.321 55.000 0.00 0.00 40.69 4.85
4028 6155 1.476845 TAGTTTCCTCGCACCCTGCA 61.477 55.000 0.00 0.00 45.36 4.41
4029 6156 2.281484 TTTCCTCGCACCCTGCAC 60.281 61.111 0.00 0.00 45.36 4.57
4030 6157 3.113514 TTTCCTCGCACCCTGCACA 62.114 57.895 0.00 0.00 45.36 4.57
4031 6158 2.616797 TTTCCTCGCACCCTGCACAA 62.617 55.000 0.00 0.00 45.36 3.33
4032 6159 3.052082 CCTCGCACCCTGCACAAG 61.052 66.667 0.00 0.00 45.36 3.16
4033 6160 3.052082 CTCGCACCCTGCACAAGG 61.052 66.667 0.00 0.00 45.36 3.61
4036 6163 2.034066 GCACCCTGCACAAGGCTA 59.966 61.111 0.00 0.00 45.89 3.93
4037 6164 2.042831 GCACCCTGCACAAGGCTAG 61.043 63.158 0.00 0.00 45.89 3.42
4038 6165 1.376466 CACCCTGCACAAGGCTAGT 59.624 57.895 0.00 0.00 45.89 2.57
4039 6166 0.250901 CACCCTGCACAAGGCTAGTT 60.251 55.000 0.00 0.00 45.89 2.24
4040 6167 0.478507 ACCCTGCACAAGGCTAGTTT 59.521 50.000 0.00 0.00 45.89 2.66
4041 6168 1.702957 ACCCTGCACAAGGCTAGTTTA 59.297 47.619 0.00 0.00 45.89 2.01
4042 6169 2.107552 ACCCTGCACAAGGCTAGTTTAA 59.892 45.455 0.00 0.00 45.89 1.52
4043 6170 2.749621 CCCTGCACAAGGCTAGTTTAAG 59.250 50.000 0.00 0.00 45.89 1.85
4044 6171 3.412386 CCTGCACAAGGCTAGTTTAAGT 58.588 45.455 0.00 0.00 45.15 2.24
4045 6172 3.821033 CCTGCACAAGGCTAGTTTAAGTT 59.179 43.478 0.00 0.00 45.15 2.66
4046 6173 4.278419 CCTGCACAAGGCTAGTTTAAGTTT 59.722 41.667 0.00 0.00 45.15 2.66
4047 6174 5.472137 CCTGCACAAGGCTAGTTTAAGTTTA 59.528 40.000 0.00 0.00 45.15 2.01
4048 6175 6.151144 CCTGCACAAGGCTAGTTTAAGTTTAT 59.849 38.462 0.00 0.00 45.15 1.40
4049 6176 7.141100 TGCACAAGGCTAGTTTAAGTTTATC 57.859 36.000 0.00 0.00 45.15 1.75
4050 6177 6.128391 TGCACAAGGCTAGTTTAAGTTTATCG 60.128 38.462 0.00 0.00 45.15 2.92
4051 6178 6.091713 GCACAAGGCTAGTTTAAGTTTATCGA 59.908 38.462 0.00 0.00 40.25 3.59
4052 6179 7.360607 GCACAAGGCTAGTTTAAGTTTATCGAA 60.361 37.037 0.00 0.00 40.25 3.71
4053 6180 8.500773 CACAAGGCTAGTTTAAGTTTATCGAAA 58.499 33.333 0.00 0.00 0.00 3.46
4054 6181 8.501580 ACAAGGCTAGTTTAAGTTTATCGAAAC 58.498 33.333 0.00 0.00 44.56 2.78
4062 6189 0.098200 GTTTATCGAAACTGCGGGGC 59.902 55.000 0.00 0.00 41.55 5.80
4063 6190 0.321741 TTTATCGAAACTGCGGGGCA 60.322 50.000 0.00 0.00 36.92 5.36
4064 6191 1.022451 TTATCGAAACTGCGGGGCAC 61.022 55.000 0.00 0.00 33.79 5.01
4065 6192 2.173758 TATCGAAACTGCGGGGCACA 62.174 55.000 0.00 0.00 33.79 4.57
4066 6193 4.025401 CGAAACTGCGGGGCACAC 62.025 66.667 0.00 0.00 33.79 3.82
4067 6194 2.904866 GAAACTGCGGGGCACACA 60.905 61.111 0.00 0.00 33.79 3.72
4068 6195 2.441164 AAACTGCGGGGCACACAA 60.441 55.556 0.00 0.00 33.79 3.33
4069 6196 2.677573 GAAACTGCGGGGCACACAAC 62.678 60.000 0.00 0.00 33.79 3.32
4070 6197 4.497984 ACTGCGGGGCACACAACA 62.498 61.111 0.00 0.00 33.79 3.33
4071 6198 3.663176 CTGCGGGGCACACAACAG 61.663 66.667 0.00 0.00 33.79 3.16
4072 6199 4.497984 TGCGGGGCACACAACAGT 62.498 61.111 0.00 0.00 31.71 3.55
4073 6200 3.216292 GCGGGGCACACAACAGTT 61.216 61.111 0.00 0.00 0.00 3.16
4074 6201 3.030652 CGGGGCACACAACAGTTC 58.969 61.111 0.00 0.00 0.00 3.01
4075 6202 2.551912 CGGGGCACACAACAGTTCC 61.552 63.158 0.00 0.00 0.00 3.62
4076 6203 2.200337 GGGGCACACAACAGTTCCC 61.200 63.158 0.00 0.00 0.00 3.97
4077 6204 2.551912 GGGCACACAACAGTTCCCG 61.552 63.158 0.00 0.00 0.00 5.14
4078 6205 2.551912 GGCACACAACAGTTCCCGG 61.552 63.158 0.00 0.00 0.00 5.73
4079 6206 3.030652 CACACAACAGTTCCCGGC 58.969 61.111 0.00 0.00 0.00 6.13
4080 6207 2.203294 ACACAACAGTTCCCGGCC 60.203 61.111 0.00 0.00 0.00 6.13
4081 6208 3.353836 CACAACAGTTCCCGGCCG 61.354 66.667 21.04 21.04 0.00 6.13
4082 6209 4.636435 ACAACAGTTCCCGGCCGG 62.636 66.667 37.99 37.99 0.00 6.13
4083 6210 4.636435 CAACAGTTCCCGGCCGGT 62.636 66.667 40.52 21.85 0.00 5.28
4084 6211 2.924101 AACAGTTCCCGGCCGGTA 60.924 61.111 40.52 26.58 0.00 4.02
4085 6212 2.295602 AACAGTTCCCGGCCGGTAT 61.296 57.895 40.52 21.50 0.00 2.73
4086 6213 2.203015 CAGTTCCCGGCCGGTATG 60.203 66.667 40.52 27.76 0.00 2.39
4087 6214 4.171103 AGTTCCCGGCCGGTATGC 62.171 66.667 40.52 26.51 0.00 3.14
4088 6215 4.476752 GTTCCCGGCCGGTATGCA 62.477 66.667 40.52 15.57 0.00 3.96
4089 6216 4.169696 TTCCCGGCCGGTATGCAG 62.170 66.667 40.52 25.11 0.00 4.41
4092 6219 4.467084 CCGGCCGGTATGCAGTGT 62.467 66.667 36.64 0.00 0.00 3.55
4093 6220 2.435938 CGGCCGGTATGCAGTGTT 60.436 61.111 20.10 0.00 0.00 3.32
4094 6221 2.749865 CGGCCGGTATGCAGTGTTG 61.750 63.158 20.10 0.00 0.00 3.33
4095 6222 2.406616 GGCCGGTATGCAGTGTTGG 61.407 63.158 1.90 0.00 0.00 3.77
4096 6223 1.376683 GCCGGTATGCAGTGTTGGA 60.377 57.895 1.90 0.00 0.00 3.53
4097 6224 0.958382 GCCGGTATGCAGTGTTGGAA 60.958 55.000 1.90 0.00 0.00 3.53
4098 6225 1.750193 CCGGTATGCAGTGTTGGAAT 58.250 50.000 0.00 0.00 0.00 3.01
4099 6226 2.912771 CCGGTATGCAGTGTTGGAATA 58.087 47.619 0.00 0.00 0.00 1.75
4100 6227 3.476552 CCGGTATGCAGTGTTGGAATAT 58.523 45.455 0.00 0.00 0.00 1.28
4101 6228 3.882888 CCGGTATGCAGTGTTGGAATATT 59.117 43.478 0.00 0.00 0.00 1.28
4102 6229 4.338118 CCGGTATGCAGTGTTGGAATATTT 59.662 41.667 0.00 0.00 0.00 1.40
4103 6230 5.273170 CGGTATGCAGTGTTGGAATATTTG 58.727 41.667 0.00 0.00 0.00 2.32
4104 6231 5.163663 CGGTATGCAGTGTTGGAATATTTGT 60.164 40.000 0.00 0.00 0.00 2.83
4105 6232 6.037720 CGGTATGCAGTGTTGGAATATTTGTA 59.962 38.462 0.00 0.00 0.00 2.41
4106 6233 7.255104 CGGTATGCAGTGTTGGAATATTTGTAT 60.255 37.037 0.00 0.00 0.00 2.29
4107 6234 9.062524 GGTATGCAGTGTTGGAATATTTGTATA 57.937 33.333 0.00 0.00 0.00 1.47
4109 6236 7.566760 TGCAGTGTTGGAATATTTGTATAGG 57.433 36.000 0.00 0.00 0.00 2.57
4110 6237 6.545666 TGCAGTGTTGGAATATTTGTATAGGG 59.454 38.462 0.00 0.00 0.00 3.53
4111 6238 6.770785 GCAGTGTTGGAATATTTGTATAGGGA 59.229 38.462 0.00 0.00 0.00 4.20
4112 6239 7.448469 GCAGTGTTGGAATATTTGTATAGGGAT 59.552 37.037 0.00 0.00 0.00 3.85
4131 6258 7.881912 AGGGATAGAGTTGTATAGAGAGAGA 57.118 40.000 0.00 0.00 0.00 3.10
4132 6259 8.282801 AGGGATAGAGTTGTATAGAGAGAGAA 57.717 38.462 0.00 0.00 0.00 2.87
4133 6260 8.161425 AGGGATAGAGTTGTATAGAGAGAGAAC 58.839 40.741 0.00 0.00 0.00 3.01
4134 6261 8.161425 GGGATAGAGTTGTATAGAGAGAGAACT 58.839 40.741 0.00 0.00 33.41 3.01
4135 6262 9.569122 GGATAGAGTTGTATAGAGAGAGAACTT 57.431 37.037 0.00 0.00 31.07 2.66
4149 6276 6.788684 GAGAGAACTTCTCCAGTTTAAACC 57.211 41.667 14.72 0.00 46.53 3.27
4150 6277 6.502074 AGAGAACTTCTCCAGTTTAAACCT 57.498 37.500 14.72 0.76 46.53 3.50
4151 6278 6.292150 AGAGAACTTCTCCAGTTTAAACCTG 58.708 40.000 14.72 11.63 46.53 4.00
4152 6279 6.002653 AGAACTTCTCCAGTTTAAACCTGT 57.997 37.500 14.72 0.00 46.53 4.00
4153 6280 7.070821 AGAGAACTTCTCCAGTTTAAACCTGTA 59.929 37.037 14.72 0.00 46.53 2.74
4154 6281 7.746703 AGAACTTCTCCAGTTTAAACCTGTAT 58.253 34.615 14.72 0.00 46.53 2.29
4155 6282 7.878644 AGAACTTCTCCAGTTTAAACCTGTATC 59.121 37.037 14.72 3.09 46.53 2.24
4156 6283 7.317722 ACTTCTCCAGTTTAAACCTGTATCT 57.682 36.000 14.72 0.00 27.32 1.98
4157 6284 7.387643 ACTTCTCCAGTTTAAACCTGTATCTC 58.612 38.462 14.72 0.00 27.32 2.75
4158 6285 6.295719 TCTCCAGTTTAAACCTGTATCTCC 57.704 41.667 14.72 0.00 0.00 3.71
4159 6286 6.023603 TCTCCAGTTTAAACCTGTATCTCCT 58.976 40.000 14.72 0.00 0.00 3.69
4160 6287 6.154706 TCTCCAGTTTAAACCTGTATCTCCTC 59.845 42.308 14.72 0.00 0.00 3.71
4161 6288 6.023603 TCCAGTTTAAACCTGTATCTCCTCT 58.976 40.000 14.72 0.00 0.00 3.69
4162 6289 7.186972 TCCAGTTTAAACCTGTATCTCCTCTA 58.813 38.462 14.72 0.00 0.00 2.43
4163 6290 7.844779 TCCAGTTTAAACCTGTATCTCCTCTAT 59.155 37.037 14.72 0.00 0.00 1.98
4164 6291 8.145122 CCAGTTTAAACCTGTATCTCCTCTATC 58.855 40.741 14.72 0.00 0.00 2.08
4165 6292 8.919145 CAGTTTAAACCTGTATCTCCTCTATCT 58.081 37.037 14.72 0.00 0.00 1.98
4166 6293 9.138596 AGTTTAAACCTGTATCTCCTCTATCTC 57.861 37.037 14.72 0.00 0.00 2.75
4167 6294 9.138596 GTTTAAACCTGTATCTCCTCTATCTCT 57.861 37.037 7.12 0.00 0.00 3.10
4168 6295 9.716556 TTTAAACCTGTATCTCCTCTATCTCTT 57.283 33.333 0.00 0.00 0.00 2.85
4169 6296 7.833285 AAACCTGTATCTCCTCTATCTCTTC 57.167 40.000 0.00 0.00 0.00 2.87
4170 6297 6.780198 ACCTGTATCTCCTCTATCTCTTCT 57.220 41.667 0.00 0.00 0.00 2.85
4171 6298 7.161715 ACCTGTATCTCCTCTATCTCTTCTT 57.838 40.000 0.00 0.00 0.00 2.52
4172 6299 7.231467 ACCTGTATCTCCTCTATCTCTTCTTC 58.769 42.308 0.00 0.00 0.00 2.87
4173 6300 7.073725 ACCTGTATCTCCTCTATCTCTTCTTCT 59.926 40.741 0.00 0.00 0.00 2.85
4174 6301 7.391554 CCTGTATCTCCTCTATCTCTTCTTCTG 59.608 44.444 0.00 0.00 0.00 3.02
4175 6302 7.811282 TGTATCTCCTCTATCTCTTCTTCTGT 58.189 38.462 0.00 0.00 0.00 3.41
4176 6303 8.278639 TGTATCTCCTCTATCTCTTCTTCTGTT 58.721 37.037 0.00 0.00 0.00 3.16
4177 6304 7.823745 ATCTCCTCTATCTCTTCTTCTGTTC 57.176 40.000 0.00 0.00 0.00 3.18
4178 6305 6.126409 TCTCCTCTATCTCTTCTTCTGTTCC 58.874 44.000 0.00 0.00 0.00 3.62
4179 6306 5.832221 TCCTCTATCTCTTCTTCTGTTCCA 58.168 41.667 0.00 0.00 0.00 3.53
4180 6307 6.256819 TCCTCTATCTCTTCTTCTGTTCCAA 58.743 40.000 0.00 0.00 0.00 3.53
4181 6308 6.726299 TCCTCTATCTCTTCTTCTGTTCCAAA 59.274 38.462 0.00 0.00 0.00 3.28
4182 6309 6.816140 CCTCTATCTCTTCTTCTGTTCCAAAC 59.184 42.308 0.00 0.00 0.00 2.93
4183 6310 7.310361 CCTCTATCTCTTCTTCTGTTCCAAACT 60.310 40.741 0.00 0.00 0.00 2.66
4184 6311 7.607250 TCTATCTCTTCTTCTGTTCCAAACTC 58.393 38.462 0.00 0.00 0.00 3.01
4185 6312 5.878406 TCTCTTCTTCTGTTCCAAACTCT 57.122 39.130 0.00 0.00 0.00 3.24
4186 6313 6.978674 TCTCTTCTTCTGTTCCAAACTCTA 57.021 37.500 0.00 0.00 0.00 2.43
4187 6314 6.750148 TCTCTTCTTCTGTTCCAAACTCTAC 58.250 40.000 0.00 0.00 0.00 2.59
4188 6315 5.855045 TCTTCTTCTGTTCCAAACTCTACC 58.145 41.667 0.00 0.00 0.00 3.18
4189 6316 4.252971 TCTTCTGTTCCAAACTCTACCG 57.747 45.455 0.00 0.00 0.00 4.02
4190 6317 3.893200 TCTTCTGTTCCAAACTCTACCGA 59.107 43.478 0.00 0.00 0.00 4.69
4191 6318 4.527038 TCTTCTGTTCCAAACTCTACCGAT 59.473 41.667 0.00 0.00 0.00 4.18
4192 6319 4.451629 TCTGTTCCAAACTCTACCGATC 57.548 45.455 0.00 0.00 0.00 3.69
4193 6320 3.830178 TCTGTTCCAAACTCTACCGATCA 59.170 43.478 0.00 0.00 0.00 2.92
4194 6321 4.282449 TCTGTTCCAAACTCTACCGATCAA 59.718 41.667 0.00 0.00 0.00 2.57
4195 6322 5.046591 TCTGTTCCAAACTCTACCGATCAAT 60.047 40.000 0.00 0.00 0.00 2.57
4196 6323 5.175859 TGTTCCAAACTCTACCGATCAATC 58.824 41.667 0.00 0.00 0.00 2.67
4197 6324 5.046591 TGTTCCAAACTCTACCGATCAATCT 60.047 40.000 0.00 0.00 0.00 2.40
4198 6325 5.011090 TCCAAACTCTACCGATCAATCTG 57.989 43.478 0.00 0.00 0.00 2.90
4199 6326 4.466370 TCCAAACTCTACCGATCAATCTGT 59.534 41.667 0.00 0.00 0.00 3.41
4200 6327 4.806247 CCAAACTCTACCGATCAATCTGTC 59.194 45.833 0.00 0.00 0.00 3.51
4201 6328 3.972950 ACTCTACCGATCAATCTGTCG 57.027 47.619 0.00 0.00 37.58 4.35
4202 6329 3.542648 ACTCTACCGATCAATCTGTCGA 58.457 45.455 0.00 0.00 40.11 4.20
4203 6330 4.138290 ACTCTACCGATCAATCTGTCGAT 58.862 43.478 0.00 0.00 40.11 3.59
4204 6331 4.214545 ACTCTACCGATCAATCTGTCGATC 59.785 45.833 0.00 0.00 40.11 3.69
4211 6338 5.957910 GATCAATCTGTCGATCGTTTTCT 57.042 39.130 15.94 0.00 0.00 2.52
4212 6339 6.337853 GATCAATCTGTCGATCGTTTTCTT 57.662 37.500 15.94 2.31 0.00 2.52
4213 6340 5.763444 TCAATCTGTCGATCGTTTTCTTC 57.237 39.130 15.94 0.00 0.00 2.87
4214 6341 5.470368 TCAATCTGTCGATCGTTTTCTTCT 58.530 37.500 15.94 0.00 0.00 2.85
4215 6342 5.926542 TCAATCTGTCGATCGTTTTCTTCTT 59.073 36.000 15.94 0.00 0.00 2.52
4216 6343 5.769967 ATCTGTCGATCGTTTTCTTCTTG 57.230 39.130 15.94 0.00 0.00 3.02
4217 6344 4.617959 TCTGTCGATCGTTTTCTTCTTGT 58.382 39.130 15.94 0.00 0.00 3.16
4218 6345 5.765176 TCTGTCGATCGTTTTCTTCTTGTA 58.235 37.500 15.94 0.00 0.00 2.41
4219 6346 5.628193 TCTGTCGATCGTTTTCTTCTTGTAC 59.372 40.000 15.94 1.34 0.00 2.90
4220 6347 5.283294 TGTCGATCGTTTTCTTCTTGTACA 58.717 37.500 15.94 4.17 0.00 2.90
4221 6348 5.174398 TGTCGATCGTTTTCTTCTTGTACAC 59.826 40.000 15.94 0.21 0.00 2.90
4222 6349 4.682860 TCGATCGTTTTCTTCTTGTACACC 59.317 41.667 15.94 0.00 0.00 4.16
4223 6350 4.446385 CGATCGTTTTCTTCTTGTACACCA 59.554 41.667 7.03 0.00 0.00 4.17
4224 6351 5.611844 CGATCGTTTTCTTCTTGTACACCAC 60.612 44.000 7.03 0.00 0.00 4.16
4225 6352 3.552699 TCGTTTTCTTCTTGTACACCACG 59.447 43.478 0.00 0.00 0.00 4.94
4226 6353 3.302870 CGTTTTCTTCTTGTACACCACGG 60.303 47.826 0.00 0.00 0.00 4.94
4227 6354 1.873698 TTCTTCTTGTACACCACGGC 58.126 50.000 0.00 0.00 0.00 5.68
4228 6355 0.753867 TCTTCTTGTACACCACGGCA 59.246 50.000 0.00 0.00 0.00 5.69
4229 6356 1.139256 TCTTCTTGTACACCACGGCAA 59.861 47.619 0.00 0.00 0.00 4.52
4230 6357 2.151202 CTTCTTGTACACCACGGCAAT 58.849 47.619 0.00 0.00 0.00 3.56
4231 6358 1.518325 TCTTGTACACCACGGCAATG 58.482 50.000 0.00 0.00 0.00 2.82
4232 6359 0.109781 CTTGTACACCACGGCAATGC 60.110 55.000 0.00 0.00 0.00 3.56
4233 6360 1.519751 TTGTACACCACGGCAATGCC 61.520 55.000 15.52 15.52 46.75 4.40
4248 6375 6.345096 GGCAATGCCCATATAAATACAAGT 57.655 37.500 14.47 0.00 44.06 3.16
4249 6376 6.158598 GGCAATGCCCATATAAATACAAGTG 58.841 40.000 14.47 0.00 44.06 3.16
4250 6377 5.634859 GCAATGCCCATATAAATACAAGTGC 59.365 40.000 0.00 0.00 0.00 4.40
4251 6378 5.627499 ATGCCCATATAAATACAAGTGCG 57.373 39.130 0.00 0.00 0.00 5.34
4252 6379 3.818210 TGCCCATATAAATACAAGTGCGG 59.182 43.478 0.00 0.00 0.00 5.69
4253 6380 3.365969 GCCCATATAAATACAAGTGCGGC 60.366 47.826 0.00 0.00 0.00 6.53
4254 6381 3.190535 CCCATATAAATACAAGTGCGGCC 59.809 47.826 0.00 0.00 0.00 6.13
4255 6382 3.190535 CCATATAAATACAAGTGCGGCCC 59.809 47.826 0.00 0.00 0.00 5.80
4256 6383 1.305201 ATAAATACAAGTGCGGCCCG 58.695 50.000 0.00 0.00 0.00 6.13
4257 6384 0.249676 TAAATACAAGTGCGGCCCGA 59.750 50.000 7.68 0.00 0.00 5.14
4258 6385 1.024579 AAATACAAGTGCGGCCCGAG 61.025 55.000 7.68 0.00 0.00 4.63
4259 6386 4.752879 TACAAGTGCGGCCCGAGC 62.753 66.667 7.68 0.00 38.76 5.03
4262 6389 4.947147 AAGTGCGGCCCGAGCAAA 62.947 61.111 7.68 0.00 46.97 3.68
4272 6399 0.519961 CCCGAGCAAAGGGTTTAACG 59.480 55.000 3.29 0.00 43.89 3.18
4273 6400 0.109919 CCGAGCAAAGGGTTTAACGC 60.110 55.000 3.87 3.87 0.00 4.84
4274 6401 0.872388 CGAGCAAAGGGTTTAACGCT 59.128 50.000 8.90 8.90 43.70 5.07
4280 6407 2.368311 AAGGGTTTAACGCTTCCCAA 57.632 45.000 19.41 0.00 46.59 4.12
4281 6408 2.597578 AGGGTTTAACGCTTCCCAAT 57.402 45.000 8.90 0.00 38.28 3.16
4282 6409 3.724732 AGGGTTTAACGCTTCCCAATA 57.275 42.857 8.90 0.00 38.28 1.90
4283 6410 4.036941 AGGGTTTAACGCTTCCCAATAA 57.963 40.909 8.90 0.00 38.28 1.40
4284 6411 4.606210 AGGGTTTAACGCTTCCCAATAAT 58.394 39.130 8.90 0.00 38.28 1.28
4285 6412 4.643334 AGGGTTTAACGCTTCCCAATAATC 59.357 41.667 8.90 0.00 38.28 1.75
4286 6413 4.643334 GGGTTTAACGCTTCCCAATAATCT 59.357 41.667 4.87 0.00 39.68 2.40
4287 6414 5.126545 GGGTTTAACGCTTCCCAATAATCTT 59.873 40.000 4.87 0.00 39.68 2.40
4288 6415 6.319405 GGGTTTAACGCTTCCCAATAATCTTA 59.681 38.462 4.87 0.00 39.68 2.10
4289 6416 7.191551 GGTTTAACGCTTCCCAATAATCTTAC 58.808 38.462 0.00 0.00 0.00 2.34
4290 6417 7.148205 GGTTTAACGCTTCCCAATAATCTTACA 60.148 37.037 0.00 0.00 0.00 2.41
4291 6418 8.403236 GTTTAACGCTTCCCAATAATCTTACAT 58.597 33.333 0.00 0.00 0.00 2.29
4292 6419 6.377327 AACGCTTCCCAATAATCTTACATG 57.623 37.500 0.00 0.00 0.00 3.21
4293 6420 4.821805 ACGCTTCCCAATAATCTTACATGG 59.178 41.667 0.00 0.00 0.00 3.66
4294 6421 4.821805 CGCTTCCCAATAATCTTACATGGT 59.178 41.667 0.00 0.00 0.00 3.55
4295 6422 5.995282 CGCTTCCCAATAATCTTACATGGTA 59.005 40.000 0.00 0.00 0.00 3.25
4296 6423 6.485313 CGCTTCCCAATAATCTTACATGGTAA 59.515 38.462 0.00 0.00 0.00 2.85
4297 6424 7.174946 CGCTTCCCAATAATCTTACATGGTAAT 59.825 37.037 0.00 0.00 0.00 1.89
4298 6425 8.515414 GCTTCCCAATAATCTTACATGGTAATC 58.485 37.037 0.00 0.00 0.00 1.75
4299 6426 9.573166 CTTCCCAATAATCTTACATGGTAATCA 57.427 33.333 0.00 0.00 0.00 2.57
4300 6427 9.573166 TTCCCAATAATCTTACATGGTAATCAG 57.427 33.333 0.00 0.00 0.00 2.90
4301 6428 8.944138 TCCCAATAATCTTACATGGTAATCAGA 58.056 33.333 0.00 0.00 0.00 3.27
4302 6429 9.224267 CCCAATAATCTTACATGGTAATCAGAG 57.776 37.037 0.00 0.00 0.00 3.35
4303 6430 8.725148 CCAATAATCTTACATGGTAATCAGAGC 58.275 37.037 0.00 0.00 0.00 4.09
4304 6431 8.438513 CAATAATCTTACATGGTAATCAGAGCG 58.561 37.037 0.00 0.00 0.00 5.03
4305 6432 5.791336 ATCTTACATGGTAATCAGAGCGA 57.209 39.130 0.00 0.00 0.00 4.93
4306 6433 4.933330 TCTTACATGGTAATCAGAGCGAC 58.067 43.478 0.00 0.00 0.00 5.19
4307 6434 4.645136 TCTTACATGGTAATCAGAGCGACT 59.355 41.667 0.00 0.00 0.00 4.18
4308 6435 3.895232 ACATGGTAATCAGAGCGACTT 57.105 42.857 0.00 0.00 0.00 3.01
4309 6436 3.786635 ACATGGTAATCAGAGCGACTTC 58.213 45.455 0.00 0.00 0.00 3.01
4310 6437 3.449018 ACATGGTAATCAGAGCGACTTCT 59.551 43.478 0.00 0.00 0.00 2.85
4311 6438 4.081420 ACATGGTAATCAGAGCGACTTCTT 60.081 41.667 0.00 0.00 0.00 2.52
4312 6439 4.111375 TGGTAATCAGAGCGACTTCTTC 57.889 45.455 0.00 0.00 0.00 2.87
4313 6440 3.119101 TGGTAATCAGAGCGACTTCTTCC 60.119 47.826 0.00 0.00 0.00 3.46
4314 6441 3.131400 GGTAATCAGAGCGACTTCTTCCT 59.869 47.826 0.00 0.00 0.00 3.36
4315 6442 4.338682 GGTAATCAGAGCGACTTCTTCCTA 59.661 45.833 0.00 0.00 0.00 2.94
4316 6443 5.163540 GGTAATCAGAGCGACTTCTTCCTAA 60.164 44.000 0.00 0.00 0.00 2.69
4317 6444 4.647424 ATCAGAGCGACTTCTTCCTAAG 57.353 45.455 0.00 0.00 0.00 2.18
4318 6445 3.687125 TCAGAGCGACTTCTTCCTAAGA 58.313 45.455 0.00 0.00 35.26 2.10
4319 6446 4.274147 TCAGAGCGACTTCTTCCTAAGAT 58.726 43.478 0.00 0.00 37.38 2.40
4320 6447 4.336993 TCAGAGCGACTTCTTCCTAAGATC 59.663 45.833 0.00 0.00 37.38 2.75
4321 6448 4.097135 CAGAGCGACTTCTTCCTAAGATCA 59.903 45.833 0.00 0.00 37.38 2.92
4322 6449 4.707448 AGAGCGACTTCTTCCTAAGATCAA 59.293 41.667 0.00 0.00 37.38 2.57
4323 6450 5.186021 AGAGCGACTTCTTCCTAAGATCAAA 59.814 40.000 0.00 0.00 37.38 2.69
4324 6451 5.794894 AGCGACTTCTTCCTAAGATCAAAA 58.205 37.500 0.00 0.00 37.38 2.44
4325 6452 5.872070 AGCGACTTCTTCCTAAGATCAAAAG 59.128 40.000 0.00 0.00 37.38 2.27
4326 6453 5.064071 GCGACTTCTTCCTAAGATCAAAAGG 59.936 44.000 0.00 0.00 37.38 3.11
4327 6454 6.398918 CGACTTCTTCCTAAGATCAAAAGGA 58.601 40.000 6.62 6.62 37.38 3.36
4328 6455 6.533367 CGACTTCTTCCTAAGATCAAAAGGAG 59.467 42.308 9.76 5.50 40.43 3.69
4329 6456 7.560796 ACTTCTTCCTAAGATCAAAAGGAGA 57.439 36.000 9.76 7.81 40.43 3.71
4330 6457 8.156822 ACTTCTTCCTAAGATCAAAAGGAGAT 57.843 34.615 9.76 0.00 40.43 2.75
4331 6458 8.264347 ACTTCTTCCTAAGATCAAAAGGAGATC 58.736 37.037 9.76 0.00 40.43 2.75
4332 6459 6.810911 TCTTCCTAAGATCAAAAGGAGATCG 58.189 40.000 9.76 3.27 45.05 3.69
4333 6460 4.950050 TCCTAAGATCAAAAGGAGATCGC 58.050 43.478 6.62 0.00 45.05 4.58
4334 6461 4.405680 TCCTAAGATCAAAAGGAGATCGCA 59.594 41.667 6.62 0.00 45.05 5.10
4335 6462 5.070981 TCCTAAGATCAAAAGGAGATCGCAT 59.929 40.000 6.62 0.00 45.05 4.73
4336 6463 5.407995 CCTAAGATCAAAAGGAGATCGCATC 59.592 44.000 0.00 0.00 45.05 3.91
4337 6464 4.686191 AGATCAAAAGGAGATCGCATCT 57.314 40.909 0.00 0.00 45.05 2.90
4338 6465 5.798125 AGATCAAAAGGAGATCGCATCTA 57.202 39.130 0.00 0.00 45.05 1.98
4339 6466 5.782047 AGATCAAAAGGAGATCGCATCTAG 58.218 41.667 0.00 0.00 45.05 2.43
4340 6467 5.538053 AGATCAAAAGGAGATCGCATCTAGA 59.462 40.000 0.00 0.00 45.05 2.43
4341 6468 4.938080 TCAAAAGGAGATCGCATCTAGAC 58.062 43.478 0.00 0.00 40.38 2.59
4342 6469 4.402474 TCAAAAGGAGATCGCATCTAGACA 59.598 41.667 0.00 0.00 40.38 3.41
4343 6470 5.105351 TCAAAAGGAGATCGCATCTAGACAA 60.105 40.000 0.00 0.00 40.38 3.18
4344 6471 4.582701 AAGGAGATCGCATCTAGACAAG 57.417 45.455 0.00 0.00 40.38 3.16
4345 6472 2.295909 AGGAGATCGCATCTAGACAAGC 59.704 50.000 0.00 0.00 40.38 4.01
4346 6473 2.609244 GGAGATCGCATCTAGACAAGCC 60.609 54.545 0.00 0.00 40.38 4.35
4347 6474 1.000827 AGATCGCATCTAGACAAGCCG 60.001 52.381 0.00 0.00 38.00 5.52
4348 6475 0.747255 ATCGCATCTAGACAAGCCGT 59.253 50.000 0.00 0.00 0.00 5.68
4349 6476 0.530744 TCGCATCTAGACAAGCCGTT 59.469 50.000 0.00 0.00 0.00 4.44
4350 6477 0.924090 CGCATCTAGACAAGCCGTTC 59.076 55.000 0.00 0.00 0.00 3.95
4351 6478 1.469940 CGCATCTAGACAAGCCGTTCT 60.470 52.381 0.00 0.00 0.00 3.01
4352 6479 2.622436 GCATCTAGACAAGCCGTTCTT 58.378 47.619 0.00 0.00 34.78 2.52
4353 6480 2.605366 GCATCTAGACAAGCCGTTCTTC 59.395 50.000 0.00 0.00 31.27 2.87
4354 6481 3.849911 CATCTAGACAAGCCGTTCTTCA 58.150 45.455 0.00 0.00 31.27 3.02
4355 6482 4.245660 CATCTAGACAAGCCGTTCTTCAA 58.754 43.478 0.00 0.00 31.27 2.69
4356 6483 3.650139 TCTAGACAAGCCGTTCTTCAAC 58.350 45.455 0.00 0.00 31.27 3.18
4357 6484 1.594331 AGACAAGCCGTTCTTCAACC 58.406 50.000 0.00 0.00 31.27 3.77
4358 6485 1.141053 AGACAAGCCGTTCTTCAACCT 59.859 47.619 0.00 0.00 31.27 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 5.072055 TCTGAGCAAATCCATCAGAAACAA 58.928 37.500 1.80 0.00 44.80 2.83
9 10 4.401519 ACCAAATCTGAGCAAATCCATCAG 59.598 41.667 0.00 0.00 41.47 2.90
12 13 3.379372 CGACCAAATCTGAGCAAATCCAT 59.621 43.478 0.00 0.00 0.00 3.41
24 25 4.979388 GTAGACGAACTACGACCAAATCT 58.021 43.478 0.00 0.00 45.77 2.40
46 47 7.802738 TGATCTAACCTAAAAACACATGAACG 58.197 34.615 0.00 0.00 0.00 3.95
71 72 4.135306 TGAAGAGTAGCGTAGATCGGAAT 58.865 43.478 0.00 0.00 40.26 3.01
83 84 0.872021 CACCGCCGATGAAGAGTAGC 60.872 60.000 0.00 0.00 0.00 3.58
93 94 0.390735 GAACAGTAACCACCGCCGAT 60.391 55.000 0.00 0.00 0.00 4.18
101 102 2.912986 CGCAGCAGAACAGTAACCA 58.087 52.632 0.00 0.00 0.00 3.67
123 124 7.900246 AGTCATCATGATAAGGTCTCATAGGAT 59.100 37.037 8.15 0.00 32.18 3.24
128 129 5.996513 GCAAGTCATCATGATAAGGTCTCAT 59.003 40.000 8.15 0.00 33.65 2.90
131 132 4.712476 GGCAAGTCATCATGATAAGGTCT 58.288 43.478 8.15 0.00 0.00 3.85
134 135 3.496130 GTCGGCAAGTCATCATGATAAGG 59.504 47.826 8.15 0.00 0.00 2.69
139 140 1.276138 ACAGTCGGCAAGTCATCATGA 59.724 47.619 0.00 0.00 0.00 3.07
145 146 3.508402 TGTATTAGACAGTCGGCAAGTCA 59.492 43.478 13.85 0.00 34.80 3.41
151 152 4.243270 ACTTGTTGTATTAGACAGTCGGC 58.757 43.478 0.00 0.00 39.88 5.54
188 190 2.115291 GTCATTGCCCTTCCCTCGC 61.115 63.158 0.00 0.00 0.00 5.03
193 195 3.508840 CGCCGTCATTGCCCTTCC 61.509 66.667 0.00 0.00 0.00 3.46
215 217 1.332178 CACTGAAGCGAGACGAAGAC 58.668 55.000 0.00 0.00 0.00 3.01
216 218 0.952280 ACACTGAAGCGAGACGAAGA 59.048 50.000 0.00 0.00 0.00 2.87
220 222 1.209128 ACAAACACTGAAGCGAGACG 58.791 50.000 0.00 0.00 0.00 4.18
222 224 3.639538 GACTACAAACACTGAAGCGAGA 58.360 45.455 0.00 0.00 0.00 4.04
225 227 2.124903 ACGACTACAAACACTGAAGCG 58.875 47.619 0.00 0.00 0.00 4.68
234 236 2.597305 CCACATAGCGACGACTACAAAC 59.403 50.000 0.00 0.00 0.00 2.93
235 237 2.229543 ACCACATAGCGACGACTACAAA 59.770 45.455 0.00 0.00 0.00 2.83
239 241 2.034104 AGACCACATAGCGACGACTA 57.966 50.000 0.00 0.00 0.00 2.59
242 244 1.669265 CTGTAGACCACATAGCGACGA 59.331 52.381 0.00 0.00 36.29 4.20
246 248 4.682787 TCAAATCTGTAGACCACATAGCG 58.317 43.478 0.00 0.00 36.29 4.26
248 250 9.035607 GTACATTCAAATCTGTAGACCACATAG 57.964 37.037 0.00 0.00 36.29 2.23
251 253 7.004555 AGTACATTCAAATCTGTAGACCACA 57.995 36.000 0.00 0.00 35.30 4.17
284 286 9.053840 TGGTAGTACAACGAACATCAAAAATAA 57.946 29.630 2.06 0.00 0.00 1.40
289 291 6.224584 TCATGGTAGTACAACGAACATCAAA 58.775 36.000 2.06 0.00 28.43 2.69
292 294 6.903883 AATCATGGTAGTACAACGAACATC 57.096 37.500 2.06 0.00 28.43 3.06
344 348 6.790285 TGAGTCAAACCCGTATACTTTTTC 57.210 37.500 0.56 0.00 0.00 2.29
345 349 6.938030 TGATGAGTCAAACCCGTATACTTTTT 59.062 34.615 0.00 0.00 0.00 1.94
354 358 3.485463 TCTTTGATGAGTCAAACCCGT 57.515 42.857 0.00 0.00 46.49 5.28
355 359 4.935205 TGTATCTTTGATGAGTCAAACCCG 59.065 41.667 0.00 0.00 46.49 5.28
357 361 7.301054 CACTTGTATCTTTGATGAGTCAAACC 58.699 38.462 0.00 0.00 46.49 3.27
362 366 4.864806 TCGCACTTGTATCTTTGATGAGTC 59.135 41.667 0.00 0.00 0.00 3.36
363 367 4.627467 GTCGCACTTGTATCTTTGATGAGT 59.373 41.667 0.00 0.00 0.00 3.41
364 368 4.627035 TGTCGCACTTGTATCTTTGATGAG 59.373 41.667 0.00 0.00 0.00 2.90
365 369 4.565022 TGTCGCACTTGTATCTTTGATGA 58.435 39.130 0.00 0.00 0.00 2.92
366 370 4.926860 TGTCGCACTTGTATCTTTGATG 57.073 40.909 0.00 0.00 0.00 3.07
367 371 4.997395 AGTTGTCGCACTTGTATCTTTGAT 59.003 37.500 0.00 0.00 0.00 2.57
368 372 4.211164 CAGTTGTCGCACTTGTATCTTTGA 59.789 41.667 0.00 0.00 0.00 2.69
369 373 4.024893 ACAGTTGTCGCACTTGTATCTTTG 60.025 41.667 0.00 0.00 0.00 2.77
370 374 4.024893 CACAGTTGTCGCACTTGTATCTTT 60.025 41.667 0.00 0.00 0.00 2.52
371 375 3.494626 CACAGTTGTCGCACTTGTATCTT 59.505 43.478 0.00 0.00 0.00 2.40
372 376 3.059884 CACAGTTGTCGCACTTGTATCT 58.940 45.455 0.00 0.00 0.00 1.98
373 377 2.411547 GCACAGTTGTCGCACTTGTATC 60.412 50.000 0.00 0.00 0.00 2.24
374 378 1.531149 GCACAGTTGTCGCACTTGTAT 59.469 47.619 0.00 0.00 0.00 2.29
384 388 1.762419 CACATGCTTGCACAGTTGTC 58.238 50.000 0.00 0.00 0.00 3.18
407 411 2.807045 GTCGTCTGCCAGTCAGCG 60.807 66.667 0.00 0.00 42.56 5.18
639 672 3.506096 CTAGAGCACGCGTCGGGA 61.506 66.667 9.86 0.00 28.17 5.14
644 677 0.109226 GAAGGTTCTAGAGCACGCGT 60.109 55.000 5.58 5.58 0.00 6.01
651 684 2.183679 AGGCTGTGGAAGGTTCTAGAG 58.816 52.381 0.00 0.00 33.15 2.43
804 838 5.099042 AGATCTTTGTGCGGTAATAAGGT 57.901 39.130 0.00 0.00 0.00 3.50
891 944 0.461961 AAGAAGAAGCTCGGATCGGG 59.538 55.000 0.00 0.00 0.00 5.14
927 980 2.351455 CCCGAGAAGAAAGAAAGCTCC 58.649 52.381 0.00 0.00 0.00 4.70
932 985 1.697432 TCAGGCCCGAGAAGAAAGAAA 59.303 47.619 0.00 0.00 0.00 2.52
934 987 1.482593 GATCAGGCCCGAGAAGAAAGA 59.517 52.381 0.00 0.00 0.00 2.52
935 988 1.474143 GGATCAGGCCCGAGAAGAAAG 60.474 57.143 0.00 0.00 0.00 2.62
936 989 0.541863 GGATCAGGCCCGAGAAGAAA 59.458 55.000 0.00 0.00 0.00 2.52
937 990 2.212327 GGATCAGGCCCGAGAAGAA 58.788 57.895 0.00 0.00 0.00 2.52
938 991 3.956377 GGATCAGGCCCGAGAAGA 58.044 61.111 0.00 0.00 0.00 2.87
954 1007 0.371645 GCAAGAAGAGCACGAATCGG 59.628 55.000 7.80 0.00 0.00 4.18
959 1012 0.667487 CCGAAGCAAGAAGAGCACGA 60.667 55.000 0.00 0.00 36.64 4.35
960 1013 0.946221 ACCGAAGCAAGAAGAGCACG 60.946 55.000 0.00 0.00 35.23 5.34
961 1014 1.996191 CTACCGAAGCAAGAAGAGCAC 59.004 52.381 0.00 0.00 0.00 4.40
962 1015 1.066858 CCTACCGAAGCAAGAAGAGCA 60.067 52.381 0.00 0.00 0.00 4.26
963 1016 1.066787 ACCTACCGAAGCAAGAAGAGC 60.067 52.381 0.00 0.00 0.00 4.09
964 1017 2.611518 CACCTACCGAAGCAAGAAGAG 58.388 52.381 0.00 0.00 0.00 2.85
965 1018 1.275291 CCACCTACCGAAGCAAGAAGA 59.725 52.381 0.00 0.00 0.00 2.87
966 1019 1.676014 CCCACCTACCGAAGCAAGAAG 60.676 57.143 0.00 0.00 0.00 2.85
1336 1395 1.304547 ACACGGGAGGGAGACTCTG 60.305 63.158 1.74 0.00 45.83 3.35
1337 1396 1.000646 GACACGGGAGGGAGACTCT 60.001 63.158 1.74 0.00 45.83 3.24
1338 1397 0.612453 AAGACACGGGAGGGAGACTC 60.612 60.000 0.00 0.00 45.84 3.36
1339 1398 0.900647 CAAGACACGGGAGGGAGACT 60.901 60.000 0.00 0.00 36.77 3.24
1340 1399 1.592223 CAAGACACGGGAGGGAGAC 59.408 63.158 0.00 0.00 36.77 3.36
1341 1400 1.609501 CCAAGACACGGGAGGGAGA 60.610 63.158 0.00 0.00 36.77 3.71
1343 1402 2.203182 ACCAAGACACGGGAGGGA 59.797 61.111 0.00 0.00 36.77 4.20
1350 1421 1.499056 GCATCAGCACCAAGACACG 59.501 57.895 0.00 0.00 41.58 4.49
1367 1438 7.137426 CCATGACTAAGAAATTAGCAAGATGC 58.863 38.462 0.00 0.00 45.46 3.91
1368 1439 8.127327 CACCATGACTAAGAAATTAGCAAGATG 58.873 37.037 0.00 0.00 0.00 2.90
1405 1485 2.713595 TCCCCATCCCCTTATTACCAG 58.286 52.381 0.00 0.00 0.00 4.00
1415 1495 0.474614 GCTTCTACTTCCCCATCCCC 59.525 60.000 0.00 0.00 0.00 4.81
1433 1513 9.716507 TCGAATAATTAACTAGCAGAAAAATGC 57.283 29.630 0.00 0.00 46.88 3.56
1441 1521 8.219769 CAGCAAGATCGAATAATTAACTAGCAG 58.780 37.037 0.00 0.00 0.00 4.24
1442 1522 7.307396 GCAGCAAGATCGAATAATTAACTAGCA 60.307 37.037 0.00 0.00 0.00 3.49
1443 1523 7.012358 GCAGCAAGATCGAATAATTAACTAGC 58.988 38.462 0.00 0.00 0.00 3.42
1444 1524 8.304202 AGCAGCAAGATCGAATAATTAACTAG 57.696 34.615 0.00 0.00 0.00 2.57
1447 1535 8.620533 AAAAGCAGCAAGATCGAATAATTAAC 57.379 30.769 0.00 0.00 0.00 2.01
1453 1541 4.937620 ACAGAAAAGCAGCAAGATCGAATA 59.062 37.500 0.00 0.00 0.00 1.75
1455 1543 3.141398 ACAGAAAAGCAGCAAGATCGAA 58.859 40.909 0.00 0.00 0.00 3.71
1467 1555 3.188048 CAGTCATGACAGGACAGAAAAGC 59.812 47.826 27.02 0.00 37.74 3.51
1473 1561 2.174363 TTGCAGTCATGACAGGACAG 57.826 50.000 27.02 14.79 37.74 3.51
1478 1567 4.690184 TGCTTAATTGCAGTCATGACAG 57.310 40.909 27.02 20.37 38.12 3.51
1505 1594 4.385825 TGCCGTCTTCTTAACACAAAGAT 58.614 39.130 0.00 0.00 35.48 2.40
1507 1596 3.607078 GCTGCCGTCTTCTTAACACAAAG 60.607 47.826 0.00 0.00 0.00 2.77
1513 1602 4.318121 CGAATATGCTGCCGTCTTCTTAAC 60.318 45.833 0.00 0.00 0.00 2.01
1518 1607 1.258982 CACGAATATGCTGCCGTCTTC 59.741 52.381 0.00 0.00 32.50 2.87
1522 1611 0.391130 ACACACGAATATGCTGCCGT 60.391 50.000 0.00 0.00 35.46 5.68
1528 1617 2.540101 GACCAGCTACACACGAATATGC 59.460 50.000 0.00 0.00 0.00 3.14
1534 1623 1.271762 ACCTAGACCAGCTACACACGA 60.272 52.381 0.00 0.00 0.00 4.35
1535 1624 1.174783 ACCTAGACCAGCTACACACG 58.825 55.000 0.00 0.00 0.00 4.49
1536 1625 4.796038 TTTACCTAGACCAGCTACACAC 57.204 45.455 0.00 0.00 0.00 3.82
1537 1626 5.020795 TGATTTACCTAGACCAGCTACACA 58.979 41.667 0.00 0.00 0.00 3.72
1538 1627 5.593010 CTGATTTACCTAGACCAGCTACAC 58.407 45.833 0.00 0.00 0.00 2.90
1546 1648 3.543680 TGCTGCTGATTTACCTAGACC 57.456 47.619 0.00 0.00 0.00 3.85
1551 1653 4.592942 TCTGAAATGCTGCTGATTTACCT 58.407 39.130 0.00 0.00 0.00 3.08
1560 1662 3.693085 CAGTGGTTATCTGAAATGCTGCT 59.307 43.478 0.00 0.00 35.20 4.24
1574 1676 4.318332 CAATCTGAAGAGCACAGTGGTTA 58.682 43.478 6.72 0.00 36.81 2.85
1577 1679 1.467734 GCAATCTGAAGAGCACAGTGG 59.532 52.381 1.84 0.00 36.81 4.00
1791 1898 2.901192 TGTACACTAGTGGCTGGCTTAA 59.099 45.455 26.12 0.00 34.19 1.85
1799 1906 0.613777 AGCCCTTGTACACTAGTGGC 59.386 55.000 26.12 17.53 36.31 5.01
1811 1918 4.021192 TCCATTAAAGCTGAAAAGCCCTTG 60.021 41.667 0.00 0.00 34.90 3.61
1821 1928 6.313519 AGGATGTACTTCCATTAAAGCTGA 57.686 37.500 25.19 0.00 38.32 4.26
1872 1981 3.620821 CACACACACACACACAATCAGTA 59.379 43.478 0.00 0.00 0.00 2.74
1873 1982 2.419673 CACACACACACACACAATCAGT 59.580 45.455 0.00 0.00 0.00 3.41
1874 1983 2.419673 ACACACACACACACACAATCAG 59.580 45.455 0.00 0.00 0.00 2.90
1875 1984 2.161211 CACACACACACACACACAATCA 59.839 45.455 0.00 0.00 0.00 2.57
1876 1985 2.161410 ACACACACACACACACACAATC 59.839 45.455 0.00 0.00 0.00 2.67
1877 1986 2.095314 CACACACACACACACACACAAT 60.095 45.455 0.00 0.00 0.00 2.71
1878 1987 1.265365 CACACACACACACACACACAA 59.735 47.619 0.00 0.00 0.00 3.33
1879 1988 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1880 1989 0.167908 CCACACACACACACACACAC 59.832 55.000 0.00 0.00 0.00 3.82
1881 1990 0.035458 TCCACACACACACACACACA 59.965 50.000 0.00 0.00 0.00 3.72
1882 1991 1.160989 TTCCACACACACACACACAC 58.839 50.000 0.00 0.00 0.00 3.82
1883 1992 1.897560 TTTCCACACACACACACACA 58.102 45.000 0.00 0.00 0.00 3.72
1884 1993 2.682856 AGATTTCCACACACACACACAC 59.317 45.455 0.00 0.00 0.00 3.82
1885 1994 2.997980 AGATTTCCACACACACACACA 58.002 42.857 0.00 0.00 0.00 3.72
1886 1995 3.627577 AGAAGATTTCCACACACACACAC 59.372 43.478 0.00 0.00 0.00 3.82
2170 2297 3.459232 TGGACAGAACTCACAACAGAG 57.541 47.619 0.00 0.00 41.44 3.35
2171 2298 3.494924 CCATGGACAGAACTCACAACAGA 60.495 47.826 5.56 0.00 0.00 3.41
2172 2299 2.810274 CCATGGACAGAACTCACAACAG 59.190 50.000 5.56 0.00 0.00 3.16
2173 2300 2.849942 CCATGGACAGAACTCACAACA 58.150 47.619 5.56 0.00 0.00 3.33
2174 2301 1.537202 GCCATGGACAGAACTCACAAC 59.463 52.381 18.40 0.00 0.00 3.32
2175 2302 1.545428 GGCCATGGACAGAACTCACAA 60.545 52.381 18.40 0.00 0.00 3.33
2311 2438 1.565305 CGGCTTCCTTCTCTTGATCG 58.435 55.000 0.00 0.00 0.00 3.69
2492 2619 4.100479 CCTTCCATGGCTTGCACA 57.900 55.556 6.96 0.00 0.00 4.57
2591 2718 6.540189 TCTTATCTTGCTTCTGGACTAATTGC 59.460 38.462 0.00 0.00 0.00 3.56
2630 2757 4.478206 TCTTTTCTTCGAGATGGCATCT 57.522 40.909 29.19 29.19 43.70 2.90
2685 2812 1.527380 GACTTGTTGTTGCCCCCGA 60.527 57.895 0.00 0.00 0.00 5.14
2687 2814 0.467290 TCTGACTTGTTGTTGCCCCC 60.467 55.000 0.00 0.00 0.00 5.40
2693 2820 1.221414 GCTCGCTCTGACTTGTTGTT 58.779 50.000 0.00 0.00 0.00 2.83
2768 2895 0.868406 GCGCTAAATTCTCCATCCCG 59.132 55.000 0.00 0.00 0.00 5.14
2858 2986 1.202222 GCCCAGAAATCGCTGTTGATG 60.202 52.381 0.00 0.00 34.06 3.07
2866 2994 0.179073 TAGCTCTGCCCAGAAATCGC 60.179 55.000 0.00 0.00 36.94 4.58
2908 3037 2.526873 ACAGCCCAGACCCGTCTT 60.527 61.111 0.00 0.00 37.98 3.01
2968 3097 1.555075 TCAGATACCCCAACTGCTGAC 59.445 52.381 0.00 0.00 0.00 3.51
3156 3285 4.153296 TGTGTCACTGCGTTAATTACCATG 59.847 41.667 4.27 0.00 0.00 3.66
3257 3386 5.183713 TCAAGAATGAAAACAGGCATGTAGG 59.816 40.000 3.57 0.00 33.16 3.18
3279 3408 3.370840 AGCCATAAAGCAGACCAATCA 57.629 42.857 0.00 0.00 34.23 2.57
3290 3419 4.221482 AGCAAAAGAGGGAAAGCCATAAAG 59.779 41.667 0.00 0.00 35.15 1.85
3401 5351 3.577389 CCCAGAGGTGTTCCAATCC 57.423 57.895 0.00 0.00 35.89 3.01
3423 5386 5.522097 GCAATTAGTCTTCAGCTTCTACTCC 59.478 44.000 0.00 0.00 0.00 3.85
3480 5443 8.567948 AGAACAATTCGTAAATGACATGACTTT 58.432 29.630 0.00 0.00 34.02 2.66
3496 5459 3.621268 TGCGGGAATTCTAGAACAATTCG 59.379 43.478 7.48 9.54 40.00 3.34
3562 5529 1.746615 ATCAAGCGACGCCTGCATT 60.747 52.632 17.79 0.00 33.85 3.56
3620 5588 4.467795 CCTGGACCATCTTCTTCAGAGTTA 59.532 45.833 0.00 0.00 33.87 2.24
3645 5616 2.035449 TCAGAACAACCGAATGTCGACT 59.965 45.455 17.92 0.00 43.74 4.18
3727 5699 4.396166 ACAGACCAGACTTTCACAACAAAG 59.604 41.667 0.00 0.00 39.03 2.77
3780 5782 2.005451 CGGCAGAAGGAGAAATGACTG 58.995 52.381 0.00 0.00 0.00 3.51
3794 5796 0.611618 ATTGGCAAATGGACGGCAGA 60.612 50.000 3.01 0.00 39.06 4.26
3799 5801 3.866883 AGGTAAATTGGCAAATGGACG 57.133 42.857 3.01 0.00 0.00 4.79
3919 5944 9.529325 CGAGTTCAATAATAAGACCACTAATCA 57.471 33.333 0.00 0.00 0.00 2.57
3928 6053 8.756864 CCTTAGCTTCGAGTTCAATAATAAGAC 58.243 37.037 0.00 0.00 0.00 3.01
4022 6149 2.489938 TAAACTAGCCTTGTGCAGGG 57.510 50.000 0.00 0.00 44.16 4.45
4024 6151 5.438761 AAACTTAAACTAGCCTTGTGCAG 57.561 39.130 0.00 0.00 44.83 4.41
4025 6152 6.128391 CGATAAACTTAAACTAGCCTTGTGCA 60.128 38.462 0.00 0.00 44.83 4.57
4026 6153 6.091713 TCGATAAACTTAAACTAGCCTTGTGC 59.908 38.462 0.00 0.00 41.71 4.57
4027 6154 7.591006 TCGATAAACTTAAACTAGCCTTGTG 57.409 36.000 0.00 0.00 0.00 3.33
4028 6155 8.501580 GTTTCGATAAACTTAAACTAGCCTTGT 58.498 33.333 0.00 0.00 41.52 3.16
4029 6156 8.876248 GTTTCGATAAACTTAAACTAGCCTTG 57.124 34.615 0.00 0.00 41.52 3.61
4043 6170 0.098200 GCCCCGCAGTTTCGATAAAC 59.902 55.000 0.00 0.00 44.47 2.01
4044 6171 0.321741 TGCCCCGCAGTTTCGATAAA 60.322 50.000 0.00 0.00 33.32 1.40
4045 6172 1.022451 GTGCCCCGCAGTTTCGATAA 61.022 55.000 0.00 0.00 40.08 1.75
4046 6173 1.448893 GTGCCCCGCAGTTTCGATA 60.449 57.895 0.00 0.00 40.08 2.92
4047 6174 2.746277 GTGCCCCGCAGTTTCGAT 60.746 61.111 0.00 0.00 40.08 3.59
4048 6175 4.243008 TGTGCCCCGCAGTTTCGA 62.243 61.111 0.00 0.00 40.08 3.71
4049 6176 4.025401 GTGTGCCCCGCAGTTTCG 62.025 66.667 0.00 0.00 40.08 3.46
4050 6177 2.485795 TTGTGTGCCCCGCAGTTTC 61.486 57.895 0.00 0.00 40.08 2.78
4051 6178 2.441164 TTGTGTGCCCCGCAGTTT 60.441 55.556 0.00 0.00 40.08 2.66
4052 6179 3.216292 GTTGTGTGCCCCGCAGTT 61.216 61.111 0.00 0.00 40.08 3.16
4053 6180 4.497984 TGTTGTGTGCCCCGCAGT 62.498 61.111 0.00 0.00 40.08 4.40
4054 6181 3.663176 CTGTTGTGTGCCCCGCAG 61.663 66.667 0.00 0.00 40.08 5.18
4055 6182 4.497984 ACTGTTGTGTGCCCCGCA 62.498 61.111 0.00 0.00 35.60 5.69
4056 6183 3.194272 GAACTGTTGTGTGCCCCGC 62.194 63.158 0.00 0.00 0.00 6.13
4057 6184 2.551912 GGAACTGTTGTGTGCCCCG 61.552 63.158 0.00 0.00 29.17 5.73
4058 6185 3.443588 GGAACTGTTGTGTGCCCC 58.556 61.111 0.00 0.00 29.17 5.80
4060 6187 2.551912 CCGGGAACTGTTGTGTGCC 61.552 63.158 0.00 0.00 34.85 5.01
4061 6188 3.030652 CCGGGAACTGTTGTGTGC 58.969 61.111 0.00 0.00 0.00 4.57
4062 6189 2.551912 GGCCGGGAACTGTTGTGTG 61.552 63.158 2.18 0.00 0.00 3.82
4063 6190 2.203294 GGCCGGGAACTGTTGTGT 60.203 61.111 2.18 0.00 0.00 3.72
4064 6191 3.353836 CGGCCGGGAACTGTTGTG 61.354 66.667 20.10 0.00 0.00 3.33
4065 6192 4.636435 CCGGCCGGGAACTGTTGT 62.636 66.667 37.42 0.00 38.47 3.32
4066 6193 2.530958 ATACCGGCCGGGAACTGTTG 62.531 60.000 44.99 19.50 39.97 3.33
4067 6194 2.295602 ATACCGGCCGGGAACTGTT 61.296 57.895 44.99 26.44 39.97 3.16
4068 6195 2.686106 ATACCGGCCGGGAACTGT 60.686 61.111 44.99 27.21 39.97 3.55
4069 6196 2.203015 CATACCGGCCGGGAACTG 60.203 66.667 44.99 30.97 39.97 3.16
4070 6197 4.171103 GCATACCGGCCGGGAACT 62.171 66.667 44.99 28.37 39.97 3.01
4071 6198 4.476752 TGCATACCGGCCGGGAAC 62.477 66.667 44.99 33.54 39.97 3.62
4072 6199 4.169696 CTGCATACCGGCCGGGAA 62.170 66.667 44.99 33.42 39.97 3.97
4075 6202 3.969250 AACACTGCATACCGGCCGG 62.969 63.158 42.17 42.17 42.03 6.13
4076 6203 2.435938 AACACTGCATACCGGCCG 60.436 61.111 21.04 21.04 0.00 6.13
4077 6204 2.406616 CCAACACTGCATACCGGCC 61.407 63.158 0.00 0.00 0.00 6.13
4078 6205 0.958382 TTCCAACACTGCATACCGGC 60.958 55.000 0.00 0.00 0.00 6.13
4079 6206 1.750193 ATTCCAACACTGCATACCGG 58.250 50.000 0.00 0.00 0.00 5.28
4080 6207 5.163663 ACAAATATTCCAACACTGCATACCG 60.164 40.000 0.00 0.00 0.00 4.02
4081 6208 6.207691 ACAAATATTCCAACACTGCATACC 57.792 37.500 0.00 0.00 0.00 2.73
4083 6210 9.283768 CCTATACAAATATTCCAACACTGCATA 57.716 33.333 0.00 0.00 0.00 3.14
4084 6211 7.231317 CCCTATACAAATATTCCAACACTGCAT 59.769 37.037 0.00 0.00 0.00 3.96
4085 6212 6.545666 CCCTATACAAATATTCCAACACTGCA 59.454 38.462 0.00 0.00 0.00 4.41
4086 6213 6.770785 TCCCTATACAAATATTCCAACACTGC 59.229 38.462 0.00 0.00 0.00 4.40
4087 6214 8.924511 ATCCCTATACAAATATTCCAACACTG 57.075 34.615 0.00 0.00 0.00 3.66
4105 6232 9.569074 TCTCTCTCTATACAACTCTATCCCTAT 57.431 37.037 0.00 0.00 0.00 2.57
4106 6233 8.975925 TCTCTCTCTATACAACTCTATCCCTA 57.024 38.462 0.00 0.00 0.00 3.53
4107 6234 7.881912 TCTCTCTCTATACAACTCTATCCCT 57.118 40.000 0.00 0.00 0.00 4.20
4108 6235 8.161425 AGTTCTCTCTCTATACAACTCTATCCC 58.839 40.741 0.00 0.00 0.00 3.85
4109 6236 9.569122 AAGTTCTCTCTCTATACAACTCTATCC 57.431 37.037 0.00 0.00 0.00 2.59
4112 6239 9.826574 GAGAAGTTCTCTCTCTATACAACTCTA 57.173 37.037 23.12 0.00 46.32 2.43
4113 6240 8.732746 GAGAAGTTCTCTCTCTATACAACTCT 57.267 38.462 23.12 0.00 46.32 3.24
4117 6244 7.891183 AACTGGAGAAGTTCTCTCTCTATACAA 59.109 37.037 27.68 4.06 46.60 2.41
4118 6245 7.406916 AACTGGAGAAGTTCTCTCTCTATACA 58.593 38.462 27.68 15.60 46.60 2.29
4119 6246 7.875327 AACTGGAGAAGTTCTCTCTCTATAC 57.125 40.000 27.68 12.28 46.60 1.47
4132 6259 7.317722 AGATACAGGTTTAAACTGGAGAAGT 57.682 36.000 14.91 8.54 42.60 3.01
4133 6260 6.819146 GGAGATACAGGTTTAAACTGGAGAAG 59.181 42.308 14.91 3.69 40.23 2.85
4134 6261 6.500751 AGGAGATACAGGTTTAAACTGGAGAA 59.499 38.462 14.91 0.00 40.23 2.87
4135 6262 6.023603 AGGAGATACAGGTTTAAACTGGAGA 58.976 40.000 14.91 0.00 40.23 3.71
4136 6263 6.155393 AGAGGAGATACAGGTTTAAACTGGAG 59.845 42.308 14.91 7.99 40.23 3.86
4137 6264 6.023603 AGAGGAGATACAGGTTTAAACTGGA 58.976 40.000 14.91 6.11 40.23 3.86
4138 6265 6.301169 AGAGGAGATACAGGTTTAAACTGG 57.699 41.667 14.91 12.13 40.23 4.00
4139 6266 8.919145 AGATAGAGGAGATACAGGTTTAAACTG 58.081 37.037 17.50 8.64 41.64 3.16
4140 6267 9.138596 GAGATAGAGGAGATACAGGTTTAAACT 57.861 37.037 17.50 1.24 0.00 2.66
4141 6268 9.138596 AGAGATAGAGGAGATACAGGTTTAAAC 57.861 37.037 9.98 9.98 0.00 2.01
4142 6269 9.716556 AAGAGATAGAGGAGATACAGGTTTAAA 57.283 33.333 0.00 0.00 0.00 1.52
4143 6270 9.357161 GAAGAGATAGAGGAGATACAGGTTTAA 57.643 37.037 0.00 0.00 0.00 1.52
4144 6271 8.729047 AGAAGAGATAGAGGAGATACAGGTTTA 58.271 37.037 0.00 0.00 0.00 2.01
4145 6272 7.591821 AGAAGAGATAGAGGAGATACAGGTTT 58.408 38.462 0.00 0.00 0.00 3.27
4146 6273 7.161715 AGAAGAGATAGAGGAGATACAGGTT 57.838 40.000 0.00 0.00 0.00 3.50
4147 6274 6.780198 AGAAGAGATAGAGGAGATACAGGT 57.220 41.667 0.00 0.00 0.00 4.00
4148 6275 7.391554 CAGAAGAAGAGATAGAGGAGATACAGG 59.608 44.444 0.00 0.00 0.00 4.00
4149 6276 7.939039 ACAGAAGAAGAGATAGAGGAGATACAG 59.061 40.741 0.00 0.00 0.00 2.74
4150 6277 7.811282 ACAGAAGAAGAGATAGAGGAGATACA 58.189 38.462 0.00 0.00 0.00 2.29
4151 6278 8.691661 AACAGAAGAAGAGATAGAGGAGATAC 57.308 38.462 0.00 0.00 0.00 2.24
4152 6279 7.942341 GGAACAGAAGAAGAGATAGAGGAGATA 59.058 40.741 0.00 0.00 0.00 1.98
4153 6280 6.777580 GGAACAGAAGAAGAGATAGAGGAGAT 59.222 42.308 0.00 0.00 0.00 2.75
4154 6281 6.126409 GGAACAGAAGAAGAGATAGAGGAGA 58.874 44.000 0.00 0.00 0.00 3.71
4155 6282 5.890985 TGGAACAGAAGAAGAGATAGAGGAG 59.109 44.000 0.00 0.00 0.00 3.69
4156 6283 5.832221 TGGAACAGAAGAAGAGATAGAGGA 58.168 41.667 0.00 0.00 0.00 3.71
4157 6284 6.537453 TTGGAACAGAAGAAGAGATAGAGG 57.463 41.667 0.00 0.00 42.39 3.69
4158 6285 7.610865 AGTTTGGAACAGAAGAAGAGATAGAG 58.389 38.462 0.00 0.00 42.39 2.43
4159 6286 7.453126 AGAGTTTGGAACAGAAGAAGAGATAGA 59.547 37.037 0.00 0.00 42.39 1.98
4160 6287 7.610865 AGAGTTTGGAACAGAAGAAGAGATAG 58.389 38.462 0.00 0.00 42.39 2.08
4161 6288 7.546250 AGAGTTTGGAACAGAAGAAGAGATA 57.454 36.000 0.00 0.00 42.39 1.98
4162 6289 6.432403 AGAGTTTGGAACAGAAGAAGAGAT 57.568 37.500 0.00 0.00 42.39 2.75
4163 6290 5.878406 AGAGTTTGGAACAGAAGAAGAGA 57.122 39.130 0.00 0.00 42.39 3.10
4164 6291 5.929415 GGTAGAGTTTGGAACAGAAGAAGAG 59.071 44.000 0.00 0.00 42.39 2.85
4165 6292 5.509163 CGGTAGAGTTTGGAACAGAAGAAGA 60.509 44.000 0.00 0.00 42.39 2.87
4166 6293 4.686554 CGGTAGAGTTTGGAACAGAAGAAG 59.313 45.833 0.00 0.00 42.39 2.85
4167 6294 4.342951 TCGGTAGAGTTTGGAACAGAAGAA 59.657 41.667 0.00 0.00 42.39 2.52
4168 6295 3.893200 TCGGTAGAGTTTGGAACAGAAGA 59.107 43.478 0.00 0.00 42.39 2.87
4169 6296 4.252971 TCGGTAGAGTTTGGAACAGAAG 57.747 45.455 0.00 0.00 42.39 2.85
4170 6297 4.282449 TGATCGGTAGAGTTTGGAACAGAA 59.718 41.667 0.00 0.00 42.39 3.02
4171 6298 3.830178 TGATCGGTAGAGTTTGGAACAGA 59.170 43.478 0.00 0.00 42.39 3.41
4172 6299 4.188247 TGATCGGTAGAGTTTGGAACAG 57.812 45.455 0.00 0.00 42.39 3.16
4173 6300 4.610605 TTGATCGGTAGAGTTTGGAACA 57.389 40.909 0.00 0.00 0.00 3.18
4174 6301 5.292101 CAGATTGATCGGTAGAGTTTGGAAC 59.708 44.000 0.00 0.00 0.00 3.62
4175 6302 5.046591 ACAGATTGATCGGTAGAGTTTGGAA 60.047 40.000 0.00 0.00 33.49 3.53
4176 6303 4.466370 ACAGATTGATCGGTAGAGTTTGGA 59.534 41.667 0.00 0.00 33.49 3.53
4177 6304 4.759782 ACAGATTGATCGGTAGAGTTTGG 58.240 43.478 0.00 0.00 33.49 3.28
4178 6305 4.500837 CGACAGATTGATCGGTAGAGTTTG 59.499 45.833 0.00 0.00 35.38 2.93
4179 6306 4.398358 TCGACAGATTGATCGGTAGAGTTT 59.602 41.667 3.74 0.00 38.86 2.66
4180 6307 3.945921 TCGACAGATTGATCGGTAGAGTT 59.054 43.478 3.74 0.00 38.86 3.01
4181 6308 3.542648 TCGACAGATTGATCGGTAGAGT 58.457 45.455 3.74 0.00 38.86 3.24
4182 6309 4.717991 GATCGACAGATTGATCGGTAGAG 58.282 47.826 11.21 2.22 39.12 2.43
4183 6310 4.750952 GATCGACAGATTGATCGGTAGA 57.249 45.455 8.81 8.81 39.75 2.59
4189 6316 5.957910 AGAAAACGATCGACAGATTGATC 57.042 39.130 24.34 7.59 40.04 2.92
4190 6317 6.102663 AGAAGAAAACGATCGACAGATTGAT 58.897 36.000 24.34 0.00 40.04 2.57
4191 6318 5.470368 AGAAGAAAACGATCGACAGATTGA 58.530 37.500 24.34 0.00 40.04 2.57
4192 6319 5.769967 AGAAGAAAACGATCGACAGATTG 57.230 39.130 24.34 0.00 42.66 2.67
4193 6320 5.696724 ACAAGAAGAAAACGATCGACAGATT 59.303 36.000 24.34 10.53 37.19 2.40
4194 6321 5.230942 ACAAGAAGAAAACGATCGACAGAT 58.769 37.500 24.34 2.82 40.38 2.90
4195 6322 4.617959 ACAAGAAGAAAACGATCGACAGA 58.382 39.130 24.34 0.00 0.00 3.41
4196 6323 4.974103 ACAAGAAGAAAACGATCGACAG 57.026 40.909 24.34 0.00 0.00 3.51
4197 6324 5.174398 GTGTACAAGAAGAAAACGATCGACA 59.826 40.000 24.34 7.74 0.00 4.35
4198 6325 5.388164 GGTGTACAAGAAGAAAACGATCGAC 60.388 44.000 24.34 9.90 0.00 4.20
4199 6326 4.682860 GGTGTACAAGAAGAAAACGATCGA 59.317 41.667 24.34 0.00 0.00 3.59
4200 6327 4.446385 TGGTGTACAAGAAGAAAACGATCG 59.554 41.667 14.88 14.88 0.00 3.69
4201 6328 5.611844 CGTGGTGTACAAGAAGAAAACGATC 60.612 44.000 0.00 0.00 0.00 3.69
4202 6329 4.210537 CGTGGTGTACAAGAAGAAAACGAT 59.789 41.667 0.00 0.00 0.00 3.73
4203 6330 3.552699 CGTGGTGTACAAGAAGAAAACGA 59.447 43.478 0.00 0.00 0.00 3.85
4204 6331 3.302870 CCGTGGTGTACAAGAAGAAAACG 60.303 47.826 0.00 0.00 0.00 3.60
4205 6332 3.547413 GCCGTGGTGTACAAGAAGAAAAC 60.547 47.826 0.00 0.00 0.00 2.43
4206 6333 2.614983 GCCGTGGTGTACAAGAAGAAAA 59.385 45.455 0.00 0.00 0.00 2.29
4207 6334 2.215196 GCCGTGGTGTACAAGAAGAAA 58.785 47.619 0.00 0.00 0.00 2.52
4208 6335 1.139256 TGCCGTGGTGTACAAGAAGAA 59.861 47.619 0.00 0.00 0.00 2.52
4209 6336 0.753867 TGCCGTGGTGTACAAGAAGA 59.246 50.000 0.00 0.00 0.00 2.87
4210 6337 1.588674 TTGCCGTGGTGTACAAGAAG 58.411 50.000 0.00 0.00 0.00 2.85
4211 6338 1.876799 CATTGCCGTGGTGTACAAGAA 59.123 47.619 0.00 0.00 0.00 2.52
4212 6339 1.518325 CATTGCCGTGGTGTACAAGA 58.482 50.000 0.00 0.00 0.00 3.02
4213 6340 0.109781 GCATTGCCGTGGTGTACAAG 60.110 55.000 0.00 0.00 0.00 3.16
4214 6341 1.519751 GGCATTGCCGTGGTGTACAA 61.520 55.000 12.82 0.00 39.62 2.41
4215 6342 1.969064 GGCATTGCCGTGGTGTACA 60.969 57.895 12.82 0.00 39.62 2.90
4216 6343 2.874751 GGCATTGCCGTGGTGTAC 59.125 61.111 12.82 0.00 39.62 2.90
4226 6353 5.634859 GCACTTGTATTTATATGGGCATTGC 59.365 40.000 0.00 0.00 0.00 3.56
4227 6354 5.858049 CGCACTTGTATTTATATGGGCATTG 59.142 40.000 0.00 0.00 0.00 2.82
4228 6355 5.048083 CCGCACTTGTATTTATATGGGCATT 60.048 40.000 0.00 0.00 0.00 3.56
4229 6356 4.458989 CCGCACTTGTATTTATATGGGCAT 59.541 41.667 0.00 0.00 0.00 4.40
4230 6357 3.818210 CCGCACTTGTATTTATATGGGCA 59.182 43.478 0.00 0.00 0.00 5.36
4231 6358 3.365969 GCCGCACTTGTATTTATATGGGC 60.366 47.826 0.00 0.00 0.00 5.36
4232 6359 3.190535 GGCCGCACTTGTATTTATATGGG 59.809 47.826 0.00 0.00 0.00 4.00
4233 6360 3.190535 GGGCCGCACTTGTATTTATATGG 59.809 47.826 0.00 0.00 0.00 2.74
4234 6361 3.120338 CGGGCCGCACTTGTATTTATATG 60.120 47.826 15.42 0.00 0.00 1.78
4235 6362 3.071479 CGGGCCGCACTTGTATTTATAT 58.929 45.455 15.42 0.00 0.00 0.86
4236 6363 2.102757 TCGGGCCGCACTTGTATTTATA 59.897 45.455 23.83 0.00 0.00 0.98
4237 6364 1.134340 TCGGGCCGCACTTGTATTTAT 60.134 47.619 23.83 0.00 0.00 1.40
4238 6365 0.249676 TCGGGCCGCACTTGTATTTA 59.750 50.000 23.83 0.00 0.00 1.40
4239 6366 1.003112 TCGGGCCGCACTTGTATTT 60.003 52.632 23.83 0.00 0.00 1.40
4240 6367 1.449601 CTCGGGCCGCACTTGTATT 60.450 57.895 23.83 0.00 0.00 1.89
4241 6368 2.186903 CTCGGGCCGCACTTGTAT 59.813 61.111 23.83 0.00 0.00 2.29
4242 6369 4.752879 GCTCGGGCCGCACTTGTA 62.753 66.667 23.83 0.00 0.00 2.41
4245 6372 4.947147 TTTGCTCGGGCCGCACTT 62.947 61.111 23.83 0.00 37.07 3.16
4251 6378 0.896479 TTAAACCCTTTGCTCGGGCC 60.896 55.000 3.94 0.00 46.04 5.80
4252 6379 0.242825 GTTAAACCCTTTGCTCGGGC 59.757 55.000 0.00 0.00 46.04 6.13
4254 6381 0.109919 GCGTTAAACCCTTTGCTCGG 60.110 55.000 0.00 0.00 0.00 4.63
4255 6382 0.872388 AGCGTTAAACCCTTTGCTCG 59.128 50.000 0.00 0.00 0.00 5.03
4256 6383 2.351447 GGAAGCGTTAAACCCTTTGCTC 60.351 50.000 0.00 0.00 0.00 4.26
4257 6384 1.611977 GGAAGCGTTAAACCCTTTGCT 59.388 47.619 0.00 0.00 0.00 3.91
4258 6385 1.336517 GGGAAGCGTTAAACCCTTTGC 60.337 52.381 0.00 0.00 39.28 3.68
4259 6386 1.957877 TGGGAAGCGTTAAACCCTTTG 59.042 47.619 0.00 0.00 42.49 2.77
4260 6387 2.368311 TGGGAAGCGTTAAACCCTTT 57.632 45.000 0.00 0.00 42.49 3.11
4261 6388 2.368311 TTGGGAAGCGTTAAACCCTT 57.632 45.000 0.00 0.00 42.49 3.95
4262 6389 2.597578 ATTGGGAAGCGTTAAACCCT 57.402 45.000 0.00 0.00 42.49 4.34
4263 6390 4.643334 AGATTATTGGGAAGCGTTAAACCC 59.357 41.667 0.00 0.00 42.37 4.11
4264 6391 5.830000 AGATTATTGGGAAGCGTTAAACC 57.170 39.130 0.00 0.00 0.00 3.27
4265 6392 7.754625 TGTAAGATTATTGGGAAGCGTTAAAC 58.245 34.615 0.00 0.00 0.00 2.01
4266 6393 7.925043 TGTAAGATTATTGGGAAGCGTTAAA 57.075 32.000 0.00 0.00 0.00 1.52
4267 6394 7.012894 CCATGTAAGATTATTGGGAAGCGTTAA 59.987 37.037 0.00 0.00 0.00 2.01
4268 6395 6.485313 CCATGTAAGATTATTGGGAAGCGTTA 59.515 38.462 0.00 0.00 0.00 3.18
4269 6396 5.299279 CCATGTAAGATTATTGGGAAGCGTT 59.701 40.000 0.00 0.00 0.00 4.84
4270 6397 4.821805 CCATGTAAGATTATTGGGAAGCGT 59.178 41.667 0.00 0.00 0.00 5.07
4271 6398 4.821805 ACCATGTAAGATTATTGGGAAGCG 59.178 41.667 0.00 0.00 0.00 4.68
4272 6399 7.817418 TTACCATGTAAGATTATTGGGAAGC 57.183 36.000 0.00 0.00 0.00 3.86
4273 6400 9.573166 TGATTACCATGTAAGATTATTGGGAAG 57.427 33.333 7.72 0.00 33.89 3.46
4274 6401 9.573166 CTGATTACCATGTAAGATTATTGGGAA 57.427 33.333 5.25 5.25 34.86 3.97
4275 6402 8.944138 TCTGATTACCATGTAAGATTATTGGGA 58.056 33.333 0.00 0.00 0.00 4.37
4276 6403 9.224267 CTCTGATTACCATGTAAGATTATTGGG 57.776 37.037 0.00 0.00 0.00 4.12
4277 6404 8.725148 GCTCTGATTACCATGTAAGATTATTGG 58.275 37.037 0.00 0.00 0.00 3.16
4278 6405 8.438513 CGCTCTGATTACCATGTAAGATTATTG 58.561 37.037 0.00 0.00 0.00 1.90
4279 6406 8.367911 TCGCTCTGATTACCATGTAAGATTATT 58.632 33.333 0.00 0.00 0.00 1.40
4280 6407 7.815068 GTCGCTCTGATTACCATGTAAGATTAT 59.185 37.037 0.00 0.00 0.00 1.28
4281 6408 7.014326 AGTCGCTCTGATTACCATGTAAGATTA 59.986 37.037 0.00 0.00 0.00 1.75
4282 6409 5.986135 GTCGCTCTGATTACCATGTAAGATT 59.014 40.000 0.00 0.00 0.00 2.40
4283 6410 5.303078 AGTCGCTCTGATTACCATGTAAGAT 59.697 40.000 0.00 0.00 0.00 2.40
4284 6411 4.645136 AGTCGCTCTGATTACCATGTAAGA 59.355 41.667 0.00 0.00 0.00 2.10
4285 6412 4.938080 AGTCGCTCTGATTACCATGTAAG 58.062 43.478 0.00 0.00 0.00 2.34
4286 6413 5.127194 AGAAGTCGCTCTGATTACCATGTAA 59.873 40.000 0.00 0.00 0.00 2.41
4287 6414 4.645136 AGAAGTCGCTCTGATTACCATGTA 59.355 41.667 0.00 0.00 0.00 2.29
4288 6415 3.449018 AGAAGTCGCTCTGATTACCATGT 59.551 43.478 0.00 0.00 0.00 3.21
4289 6416 4.052159 AGAAGTCGCTCTGATTACCATG 57.948 45.455 0.00 0.00 0.00 3.66
4290 6417 4.442192 GGAAGAAGTCGCTCTGATTACCAT 60.442 45.833 0.00 0.00 0.00 3.55
4291 6418 3.119101 GGAAGAAGTCGCTCTGATTACCA 60.119 47.826 0.00 0.00 0.00 3.25
4292 6419 3.131400 AGGAAGAAGTCGCTCTGATTACC 59.869 47.826 0.00 0.00 0.00 2.85
4293 6420 4.379339 AGGAAGAAGTCGCTCTGATTAC 57.621 45.455 0.00 0.00 0.00 1.89
4294 6421 5.886474 TCTTAGGAAGAAGTCGCTCTGATTA 59.114 40.000 0.00 0.00 33.83 1.75
4295 6422 4.707448 TCTTAGGAAGAAGTCGCTCTGATT 59.293 41.667 0.00 0.00 33.83 2.57
4296 6423 4.274147 TCTTAGGAAGAAGTCGCTCTGAT 58.726 43.478 0.00 0.00 33.83 2.90
4297 6424 3.687125 TCTTAGGAAGAAGTCGCTCTGA 58.313 45.455 0.00 0.00 33.83 3.27
4298 6425 4.097135 TGATCTTAGGAAGAAGTCGCTCTG 59.903 45.833 0.00 0.00 41.63 3.35
4299 6426 4.274147 TGATCTTAGGAAGAAGTCGCTCT 58.726 43.478 0.00 0.00 41.63 4.09
4300 6427 4.640789 TGATCTTAGGAAGAAGTCGCTC 57.359 45.455 0.00 0.00 41.63 5.03
4301 6428 5.407407 TTTGATCTTAGGAAGAAGTCGCT 57.593 39.130 0.00 0.00 41.63 4.93
4302 6429 5.064071 CCTTTTGATCTTAGGAAGAAGTCGC 59.936 44.000 0.00 0.00 41.63 5.19
4303 6430 6.398918 TCCTTTTGATCTTAGGAAGAAGTCG 58.601 40.000 8.11 0.00 41.63 4.18
4304 6431 7.616313 TCTCCTTTTGATCTTAGGAAGAAGTC 58.384 38.462 10.77 0.00 41.63 3.01
4305 6432 7.560796 TCTCCTTTTGATCTTAGGAAGAAGT 57.439 36.000 10.77 0.00 41.63 3.01
4306 6433 7.437862 CGATCTCCTTTTGATCTTAGGAAGAAG 59.562 40.741 10.77 2.55 41.63 2.85
4307 6434 7.268586 CGATCTCCTTTTGATCTTAGGAAGAA 58.731 38.462 10.77 3.08 41.63 2.52
4308 6435 6.684111 GCGATCTCCTTTTGATCTTAGGAAGA 60.684 42.308 10.77 10.36 42.69 2.87
4309 6436 5.465056 GCGATCTCCTTTTGATCTTAGGAAG 59.535 44.000 10.77 6.84 37.61 3.46
4310 6437 5.104941 TGCGATCTCCTTTTGATCTTAGGAA 60.105 40.000 10.77 4.97 37.61 3.36
4311 6438 4.405680 TGCGATCTCCTTTTGATCTTAGGA 59.594 41.667 9.64 9.64 38.43 2.94
4312 6439 4.697514 TGCGATCTCCTTTTGATCTTAGG 58.302 43.478 0.00 0.00 38.43 2.69
4313 6440 6.222389 AGATGCGATCTCCTTTTGATCTTAG 58.778 40.000 0.00 0.00 38.43 2.18
4314 6441 6.166984 AGATGCGATCTCCTTTTGATCTTA 57.833 37.500 0.00 0.00 38.43 2.10
4315 6442 5.033589 AGATGCGATCTCCTTTTGATCTT 57.966 39.130 0.00 0.00 38.43 2.40
4316 6443 4.686191 AGATGCGATCTCCTTTTGATCT 57.314 40.909 0.00 0.00 38.43 2.75
4317 6444 5.633182 GTCTAGATGCGATCTCCTTTTGATC 59.367 44.000 0.00 0.00 40.76 2.92
4318 6445 5.069648 TGTCTAGATGCGATCTCCTTTTGAT 59.930 40.000 0.00 0.00 40.76 2.57
4319 6446 4.402474 TGTCTAGATGCGATCTCCTTTTGA 59.598 41.667 0.00 0.00 40.76 2.69
4320 6447 4.686972 TGTCTAGATGCGATCTCCTTTTG 58.313 43.478 0.00 0.00 40.76 2.44
4321 6448 5.344743 TTGTCTAGATGCGATCTCCTTTT 57.655 39.130 0.00 0.00 40.76 2.27
4322 6449 4.739137 GCTTGTCTAGATGCGATCTCCTTT 60.739 45.833 0.00 0.00 40.76 3.11
4323 6450 3.243704 GCTTGTCTAGATGCGATCTCCTT 60.244 47.826 0.00 0.00 40.76 3.36
4324 6451 2.295909 GCTTGTCTAGATGCGATCTCCT 59.704 50.000 0.00 0.00 40.76 3.69
4325 6452 2.609244 GGCTTGTCTAGATGCGATCTCC 60.609 54.545 0.00 0.00 40.76 3.71
4326 6453 2.671596 GGCTTGTCTAGATGCGATCTC 58.328 52.381 0.00 0.00 40.76 2.75
4327 6454 1.000827 CGGCTTGTCTAGATGCGATCT 60.001 52.381 0.00 4.45 43.33 2.75
4328 6455 1.269309 ACGGCTTGTCTAGATGCGATC 60.269 52.381 0.00 0.00 0.00 3.69
4329 6456 0.747255 ACGGCTTGTCTAGATGCGAT 59.253 50.000 0.00 0.00 0.00 4.58
4330 6457 0.530744 AACGGCTTGTCTAGATGCGA 59.469 50.000 0.00 0.00 0.00 5.10
4331 6458 0.924090 GAACGGCTTGTCTAGATGCG 59.076 55.000 0.00 1.59 0.00 4.73
4332 6459 2.301577 AGAACGGCTTGTCTAGATGC 57.698 50.000 0.00 1.16 0.00 3.91
4333 6460 3.849911 TGAAGAACGGCTTGTCTAGATG 58.150 45.455 0.00 0.00 36.83 2.90
4334 6461 4.246458 GTTGAAGAACGGCTTGTCTAGAT 58.754 43.478 0.00 0.00 36.83 1.98
4335 6462 3.554337 GGTTGAAGAACGGCTTGTCTAGA 60.554 47.826 0.00 0.00 36.83 2.43
4336 6463 2.737252 GGTTGAAGAACGGCTTGTCTAG 59.263 50.000 0.00 0.00 36.83 2.43
4337 6464 2.367567 AGGTTGAAGAACGGCTTGTCTA 59.632 45.455 0.00 0.00 36.83 2.59
4338 6465 1.141053 AGGTTGAAGAACGGCTTGTCT 59.859 47.619 0.00 0.00 36.83 3.41
4339 6466 1.594331 AGGTTGAAGAACGGCTTGTC 58.406 50.000 0.00 0.00 36.83 3.18
4340 6467 3.800826 AGGTTGAAGAACGGCTTGT 57.199 47.368 0.00 0.00 36.83 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.