Multiple sequence alignment - TraesCS1A01G374700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G374700 chr1A 100.000 6900 0 0 1 6900 549707416 549714315 0.000000e+00 12743.0
1 TraesCS1A01G374700 chr1A 83.333 126 18 2 3841 3964 13489089 13489213 5.660000e-21 113.0
2 TraesCS1A01G374700 chr1A 85.075 67 8 2 5999 6063 534840408 534840474 4.470000e-07 67.6
3 TraesCS1A01G374700 chr1B 88.880 2455 176 34 860 3288 626684194 626686577 0.000000e+00 2931.0
4 TraesCS1A01G374700 chr1B 94.385 1407 69 6 3979 5380 626687233 626688634 0.000000e+00 2152.0
5 TraesCS1A01G374700 chr1B 89.540 870 57 13 1 848 626679798 626680655 0.000000e+00 1072.0
6 TraesCS1A01G374700 chr1B 89.371 461 24 7 5682 6117 626688630 626689090 2.170000e-154 556.0
7 TraesCS1A01G374700 chr1B 83.448 290 32 3 1137 1410 626668128 626668417 8.880000e-64 255.0
8 TraesCS1A01G374700 chr1B 85.646 209 18 6 3786 3982 626686746 626686954 7.010000e-50 209.0
9 TraesCS1A01G374700 chr1B 90.741 54 5 0 6010 6063 594137287 594137234 9.600000e-09 73.1
10 TraesCS1A01G374700 chr1B 100.000 28 0 0 6186 6213 626689132 626689159 1.300000e-02 52.8
11 TraesCS1A01G374700 chr1D 96.867 1596 47 2 3786 5380 457073159 457074752 0.000000e+00 2667.0
12 TraesCS1A01G374700 chr1D 88.041 1455 126 16 2104 3526 457071727 457073165 0.000000e+00 1679.0
13 TraesCS1A01G374700 chr1D 92.800 1125 64 6 848 1958 457069356 457070477 0.000000e+00 1613.0
14 TraesCS1A01G374700 chr1D 80.368 489 45 28 399 846 457068765 457069243 2.400000e-84 324.0
15 TraesCS1A01G374700 chr1D 81.704 399 58 7 1 393 457066954 457067343 1.120000e-82 318.0
16 TraesCS1A01G374700 chr1D 77.444 399 36 35 899 1294 457063924 457064271 9.140000e-44 189.0
17 TraesCS1A01G374700 chr1D 84.545 110 7 4 5682 5781 457074748 457074857 4.400000e-17 100.0
18 TraesCS1A01G374700 chr3D 87.611 452 49 5 4548 4997 363867478 363867924 1.030000e-142 518.0
19 TraesCS1A01G374700 chr3D 83.030 330 53 3 4992 5320 363868027 363868354 5.230000e-76 296.0
20 TraesCS1A01G374700 chr3D 72.520 746 186 13 4562 5302 17376849 17377580 2.500000e-54 224.0
21 TraesCS1A01G374700 chr3D 88.050 159 14 5 3538 3692 303900580 303900737 4.250000e-42 183.0
22 TraesCS1A01G374700 chr3D 91.071 112 10 0 3581 3692 567163011 567163122 1.200000e-32 152.0
23 TraesCS1A01G374700 chr3D 78.333 180 30 6 4363 4539 363867187 363867360 2.630000e-19 108.0
24 TraesCS1A01G374700 chr3A 87.389 452 50 5 4548 4997 485010570 485011016 4.770000e-141 512.0
25 TraesCS1A01G374700 chr3A 83.030 330 53 3 4992 5320 485011100 485011427 5.230000e-76 296.0
26 TraesCS1A01G374700 chr3A 82.812 128 19 2 3841 3966 639632616 639632490 2.030000e-20 111.0
27 TraesCS1A01G374700 chr3A 77.778 180 31 6 4363 4539 485010302 485010475 1.220000e-17 102.0
28 TraesCS1A01G374700 chr3A 86.667 60 6 2 6005 6063 694091103 694091045 1.610000e-06 65.8
29 TraesCS1A01G374700 chr3B 86.957 460 51 7 4548 5005 474027353 474027805 6.170000e-140 508.0
30 TraesCS1A01G374700 chr3B 82.727 330 54 3 4992 5320 474027905 474028232 2.430000e-74 291.0
31 TraesCS1A01G374700 chr7B 97.890 237 5 0 5445 5681 707738821 707739057 1.790000e-110 411.0
32 TraesCS1A01G374700 chr7B 97.479 238 6 0 5445 5682 468052408 468052171 2.320000e-109 407.0
33 TraesCS1A01G374700 chr7B 97.468 237 6 0 5445 5681 112002633 112002869 8.330000e-109 405.0
34 TraesCS1A01G374700 chr7B 97.468 237 6 0 5445 5681 112008358 112008594 8.330000e-109 405.0
35 TraesCS1A01G374700 chr7B 97.468 237 6 0 5445 5681 468058123 468057887 8.330000e-109 405.0
36 TraesCS1A01G374700 chr7B 97.183 142 4 0 5445 5586 707743807 707743948 2.490000e-59 241.0
37 TraesCS1A01G374700 chr7B 96.939 98 3 0 5586 5683 707749783 707749880 1.540000e-36 165.0
38 TraesCS1A01G374700 chr7B 98.507 67 1 0 5381 5447 112002324 112002390 1.220000e-22 119.0
39 TraesCS1A01G374700 chr7B 98.507 67 1 0 5381 5447 468052717 468052651 1.220000e-22 119.0
40 TraesCS1A01G374700 chr7B 98.507 67 1 0 5381 5447 468058432 468058366 1.220000e-22 119.0
41 TraesCS1A01G374700 chr7B 98.507 67 1 0 5381 5447 707743499 707743565 1.220000e-22 119.0
42 TraesCS1A01G374700 chr7B 97.059 68 2 0 5380 5447 707738512 707738579 1.570000e-21 115.0
43 TraesCS1A01G374700 chr7B 82.812 128 19 2 3841 3966 572508821 572508947 2.030000e-20 111.0
44 TraesCS1A01G374700 chr6D 81.282 390 33 18 6206 6559 417508748 417509133 5.270000e-71 279.0
45 TraesCS1A01G374700 chr6D 92.500 80 4 1 6130 6207 417508645 417508724 5.660000e-21 113.0
46 TraesCS1A01G374700 chr7D 78.067 538 51 16 6130 6616 41403459 41403980 1.900000e-70 278.0
47 TraesCS1A01G374700 chr7D 76.415 212 44 6 4859 5067 25522706 25522498 7.320000e-20 110.0
48 TraesCS1A01G374700 chr7D 90.385 52 5 0 6006 6057 32530041 32529990 1.240000e-07 69.4
49 TraesCS1A01G374700 chr5A 77.362 508 85 25 4644 5133 67471571 67471076 2.450000e-69 274.0
50 TraesCS1A01G374700 chr5A 90.385 104 10 0 3589 3692 454709391 454709288 3.360000e-28 137.0
51 TraesCS1A01G374700 chr5B 77.941 544 43 22 6135 6616 629405529 629405001 1.140000e-67 268.0
52 TraesCS1A01G374700 chr5B 77.210 509 78 32 4644 5133 79805241 79804752 5.310000e-66 263.0
53 TraesCS1A01G374700 chr5B 98.529 68 1 0 5380 5447 218218592 218218659 3.380000e-23 121.0
54 TraesCS1A01G374700 chr5B 81.111 180 9 6 6130 6284 427648548 427648727 3.380000e-23 121.0
55 TraesCS1A01G374700 chr5B 98.507 67 1 0 5381 5447 673118837 673118903 1.220000e-22 119.0
56 TraesCS1A01G374700 chr5B 96.774 62 2 0 5445 5506 673119145 673119206 3.400000e-18 104.0
57 TraesCS1A01G374700 chr5B 81.250 128 21 2 3841 3966 141161358 141161484 4.400000e-17 100.0
58 TraesCS1A01G374700 chr4D 85.200 250 29 6 3538 3784 180028384 180028628 4.130000e-62 250.0
59 TraesCS1A01G374700 chr4D 94.444 36 0 2 4695 4729 35165489 35165523 3.000000e-03 54.7
60 TraesCS1A01G374700 chr5D 76.575 508 83 30 4644 5133 72902752 72902263 5.350000e-61 246.0
61 TraesCS1A01G374700 chr5D 97.500 40 1 0 6006 6045 487537533 487537572 1.240000e-07 69.4
62 TraesCS1A01G374700 chr2D 83.133 249 35 7 3538 3780 581803729 581803482 3.240000e-53 220.0
63 TraesCS1A01G374700 chr2B 82.213 253 33 11 3538 3780 699475192 699475442 2.520000e-49 207.0
64 TraesCS1A01G374700 chr2B 76.959 217 28 13 3557 3759 150117292 150117084 3.400000e-18 104.0
65 TraesCS1A01G374700 chr2B 87.719 57 7 0 6000 6056 263852898 263852954 4.470000e-07 67.6
66 TraesCS1A01G374700 chr4B 79.747 316 34 17 6315 6616 167169261 167168962 1.170000e-47 202.0
67 TraesCS1A01G374700 chr4B 81.250 128 21 2 3841 3966 167385246 167385372 4.400000e-17 100.0
68 TraesCS1A01G374700 chr4B 100.000 28 0 0 4701 4728 50836630 50836603 1.300000e-02 52.8
69 TraesCS1A01G374700 chr6B 83.537 164 24 3 3581 3742 62155559 62155397 4.310000e-32 150.0
70 TraesCS1A01G374700 chr6B 96.154 78 3 0 6130 6207 206830644 206830567 2.020000e-25 128.0
71 TraesCS1A01G374700 chr6B 81.250 128 21 2 3841 3966 45731640 45731766 4.400000e-17 100.0
72 TraesCS1A01G374700 chr4A 83.217 143 20 3 3616 3754 551121141 551121283 2.020000e-25 128.0
73 TraesCS1A01G374700 chr4A 75.701 214 42 9 4859 5067 709977558 709977350 1.580000e-16 99.0
74 TraesCS1A01G374700 chr4A 100.000 29 0 0 4701 4729 567480354 567480326 3.000000e-03 54.7
75 TraesCS1A01G374700 chr6A 98.507 67 1 0 5381 5447 599635016 599635082 1.220000e-22 119.0
76 TraesCS1A01G374700 chr6A 98.507 67 1 0 5381 5447 599641373 599641439 1.220000e-22 119.0
77 TraesCS1A01G374700 chr6A 96.774 62 2 0 5445 5506 599635324 599635385 3.400000e-18 104.0
78 TraesCS1A01G374700 chr6A 98.276 58 1 0 5445 5502 599641681 599641738 1.220000e-17 102.0
79 TraesCS1A01G374700 chr6A 97.872 47 1 0 5999 6045 19868078 19868124 1.600000e-11 82.4
80 TraesCS1A01G374700 chr7A 83.594 128 18 2 3841 3966 42737254 42737380 4.370000e-22 117.0
81 TraesCS1A01G374700 chr7A 75.701 214 42 9 4859 5067 26449003 26448795 1.580000e-16 99.0
82 TraesCS1A01G374700 chr7A 90.909 55 5 0 6002 6056 473032673 473032619 2.670000e-09 75.0
83 TraesCS1A01G374700 chr7A 89.130 46 5 0 3745 3790 677618198 677618243 2.690000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G374700 chr1A 549707416 549714315 6899 False 12743.000000 12743 100.000000 1 6900 1 chr1A.!!$F3 6899
1 TraesCS1A01G374700 chr1B 626679798 626689159 9361 False 1162.133333 2931 91.303667 1 6213 6 chr1B.!!$F2 6212
2 TraesCS1A01G374700 chr1D 457063924 457074857 10933 False 984.285714 2667 85.967000 1 5781 7 chr1D.!!$F1 5780
3 TraesCS1A01G374700 chr3D 363867187 363868354 1167 False 307.333333 518 82.991333 4363 5320 3 chr3D.!!$F4 957
4 TraesCS1A01G374700 chr3D 17376849 17377580 731 False 224.000000 224 72.520000 4562 5302 1 chr3D.!!$F1 740
5 TraesCS1A01G374700 chr3A 485010302 485011427 1125 False 303.333333 512 82.732333 4363 5320 3 chr3A.!!$F1 957
6 TraesCS1A01G374700 chr3B 474027353 474028232 879 False 399.500000 508 84.842000 4548 5320 2 chr3B.!!$F1 772
7 TraesCS1A01G374700 chr7B 468052171 468052717 546 True 263.000000 407 97.993000 5381 5682 2 chr7B.!!$R1 301
8 TraesCS1A01G374700 chr7B 707738512 707739057 545 False 263.000000 411 97.474500 5380 5681 2 chr7B.!!$F5 301
9 TraesCS1A01G374700 chr7B 112002324 112002869 545 False 262.000000 405 97.987500 5381 5681 2 chr7B.!!$F4 300
10 TraesCS1A01G374700 chr7B 468057887 468058432 545 True 262.000000 405 97.987500 5381 5681 2 chr7B.!!$R2 300
11 TraesCS1A01G374700 chr7D 41403459 41403980 521 False 278.000000 278 78.067000 6130 6616 1 chr7D.!!$F1 486
12 TraesCS1A01G374700 chr5B 629405001 629405529 528 True 268.000000 268 77.941000 6135 6616 1 chr5B.!!$R2 481

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
560 5033 0.391597 GGACTCTCGTGGTTGTGGAA 59.608 55.0 0.00 0.0 0.00 3.53 F
2501 11709 0.247736 ACACATTGCTCGTCCTCTCC 59.752 55.0 0.00 0.0 0.00 3.71 F
2871 12082 0.179161 CTCACCGTGATCGACCAGAC 60.179 60.0 0.62 0.0 39.71 3.51 F
3539 12773 0.035152 CACTGGTCAGCTGCCCATAA 60.035 55.0 18.38 0.0 0.00 1.90 F
3542 12776 0.106569 TGGTCAGCTGCCCATAATGG 60.107 55.0 13.62 0.0 37.25 3.16 F
5485 15492 0.257039 CCCTGCTCCTGCCATACTTT 59.743 55.0 0.00 0.0 38.71 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2503 11711 0.023732 CTAGACGCAACATCGCAACG 59.976 55.000 0.00 0.00 0.00 4.10 R
3513 12747 0.107456 CAGCTGACCAGTGACCAGTT 59.893 55.000 8.42 4.95 0.00 3.16 R
4305 13833 0.242825 TCTTGCGGACGTACAGGAAG 59.757 55.000 14.49 14.49 41.55 3.46 R
5485 15492 1.000019 AACAGGGAGATCGTCGGGA 60.000 57.895 0.00 0.00 0.00 5.14 R
5511 15518 1.371183 CTTGCGGTCTCCACTCCAA 59.629 57.895 0.00 0.00 0.00 3.53 R
6375 16475 0.107066 ATCGCCTCCATGTCATGCAA 60.107 50.000 7.35 0.00 0.00 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 3145 2.892373 TTAAAGAATTGCGAGCACCG 57.108 45.000 0.00 0.00 42.21 4.94
157 3193 1.070786 GGCTCGTTCCACCACAAGA 59.929 57.895 0.00 0.00 0.00 3.02
177 3213 5.899631 AGAAACCTAACCACCTCAACTAA 57.100 39.130 0.00 0.00 0.00 2.24
351 3389 1.503818 CGTTTCTTCCACCCCGTGTG 61.504 60.000 0.00 0.00 45.01 3.82
367 3405 2.167281 CGTGTGGATCAGAGAGGTGAAT 59.833 50.000 0.00 0.00 0.00 2.57
368 3406 3.529533 GTGTGGATCAGAGAGGTGAATG 58.470 50.000 0.00 0.00 0.00 2.67
369 3407 3.196469 GTGTGGATCAGAGAGGTGAATGA 59.804 47.826 0.00 0.00 0.00 2.57
370 3408 3.840078 TGTGGATCAGAGAGGTGAATGAA 59.160 43.478 0.00 0.00 0.00 2.57
374 3412 4.442753 GGATCAGAGAGGTGAATGAACTCC 60.443 50.000 0.00 0.00 31.70 3.85
402 4856 4.797275 GCAAGTTTTCAGAAATGAGGGTGG 60.797 45.833 0.00 0.00 0.00 4.61
454 4912 1.167851 TTCATTTGGCGCTTCTCCAG 58.832 50.000 7.64 0.00 34.66 3.86
529 5000 0.901124 AGCTAGGAGCACAACCTGAG 59.099 55.000 0.64 0.00 45.56 3.35
532 5003 1.205893 CTAGGAGCACAACCTGAGACC 59.794 57.143 0.00 0.00 38.31 3.85
537 5010 1.348036 AGCACAACCTGAGACCCTAAC 59.652 52.381 0.00 0.00 0.00 2.34
554 5027 2.930826 AACAATGGACTCTCGTGGTT 57.069 45.000 0.00 0.00 0.00 3.67
560 5033 0.391597 GGACTCTCGTGGTTGTGGAA 59.608 55.000 0.00 0.00 0.00 3.53
683 5190 2.287909 TGTGCAAGGAAATGGCGTTAAC 60.288 45.455 0.00 0.00 0.00 2.01
689 5196 4.929819 AGGAAATGGCGTTAACTTTTGT 57.070 36.364 3.71 0.00 0.00 2.83
698 5205 5.694910 TGGCGTTAACTTTTGTTTGTTTTCA 59.305 32.000 3.71 0.00 43.32 2.69
708 5215 4.545823 TGTTTGTTTTCACTGACGATCC 57.454 40.909 0.00 0.00 0.00 3.36
738 5247 6.379703 TGTTCATTTTTGTTTCTCTCCCTGAA 59.620 34.615 0.00 0.00 0.00 3.02
786 5298 5.353123 TGATTATTAGACAGGGAAAACGTGC 59.647 40.000 0.00 0.00 38.50 5.34
849 5361 4.704965 ACAACTTTAGACGAGAAAAGGCT 58.295 39.130 11.00 0.00 37.09 4.58
851 5363 5.695363 ACAACTTTAGACGAGAAAAGGCTAC 59.305 40.000 11.00 0.00 37.09 3.58
852 5364 4.818642 ACTTTAGACGAGAAAAGGCTACC 58.181 43.478 11.00 0.00 37.09 3.18
853 5365 3.498927 TTAGACGAGAAAAGGCTACCG 57.501 47.619 0.00 0.00 0.00 4.02
864 8910 3.468140 GCTACCGGAGACCCACCC 61.468 72.222 9.46 0.00 0.00 4.61
1132 9191 1.152567 CCGCTCCTCATCCTCCTCT 60.153 63.158 0.00 0.00 0.00 3.69
1143 9202 0.704664 TCCTCCTCTGTGTCCTGCTA 59.295 55.000 0.00 0.00 0.00 3.49
1228 9287 1.376424 AACTCGAGCATGTGCCAGG 60.376 57.895 13.61 0.00 43.38 4.45
1229 9288 2.513204 CTCGAGCATGTGCCAGGG 60.513 66.667 0.00 0.00 43.38 4.45
1269 9328 3.340928 GCTTAACATCCACTACCCGTTT 58.659 45.455 0.00 0.00 0.00 3.60
1289 9348 2.526888 TACCTCTCCAACGAGTCCAT 57.473 50.000 0.00 0.00 37.40 3.41
1302 9361 4.124351 TCCATGGTCGTCGACGGC 62.124 66.667 35.05 34.10 44.28 5.68
1320 9379 1.533469 GCGTGTCCCAGTCCTACTGT 61.533 60.000 6.33 0.00 44.50 3.55
1582 9641 0.952497 CGACTGCAGCTTCACCACAT 60.952 55.000 15.27 0.00 0.00 3.21
1602 9661 2.753043 GTCACCGTCGCCCCTCTA 60.753 66.667 0.00 0.00 0.00 2.43
1988 10050 2.684881 CTCTGTGTTTTTGTCCTGCACT 59.315 45.455 0.00 0.00 0.00 4.40
2022 10084 2.427232 TCAGCAGCAGAACAATTTGC 57.573 45.000 0.00 0.00 40.57 3.68
2041 10103 4.137116 TGCTTGCATTTCGGTACTATCT 57.863 40.909 0.00 0.00 0.00 1.98
2044 10106 4.442706 CTTGCATTTCGGTACTATCTGGT 58.557 43.478 0.00 0.00 0.00 4.00
2045 10107 3.792401 TGCATTTCGGTACTATCTGGTG 58.208 45.455 0.00 0.00 0.00 4.17
2046 10108 3.131396 GCATTTCGGTACTATCTGGTGG 58.869 50.000 0.00 0.00 0.00 4.61
2047 10109 3.181469 GCATTTCGGTACTATCTGGTGGA 60.181 47.826 0.00 0.00 0.00 4.02
2048 10110 4.682320 GCATTTCGGTACTATCTGGTGGAA 60.682 45.833 0.00 0.00 0.00 3.53
2144 11334 2.382305 TCCCTTCTAGACCCAGTCTTGA 59.618 50.000 2.05 3.74 40.28 3.02
2167 11365 1.826054 TGCCACGGGACCAAAACTG 60.826 57.895 0.00 0.00 0.00 3.16
2171 11369 1.003812 CCACGGGACCAAAACTGGATA 59.996 52.381 0.00 0.00 0.00 2.59
2172 11370 2.553466 CCACGGGACCAAAACTGGATAA 60.553 50.000 0.00 0.00 0.00 1.75
2175 11373 2.786777 GGGACCAAAACTGGATAACGT 58.213 47.619 0.00 0.00 0.00 3.99
2237 11435 0.656205 CGCCCGAAACGTTTGACTTG 60.656 55.000 20.10 1.47 0.00 3.16
2256 11454 2.876368 GAACCTCGGCTCCACCATGG 62.876 65.000 11.19 11.19 39.03 3.66
2279 11477 2.636412 CCTCTGGTCGAGCCGTCAA 61.636 63.158 12.85 0.00 41.21 3.18
2303 11511 4.374399 GCGGGAGGAAGACGATAAAATAA 58.626 43.478 0.00 0.00 0.00 1.40
2305 11513 5.598769 CGGGAGGAAGACGATAAAATAACT 58.401 41.667 0.00 0.00 0.00 2.24
2364 11572 2.350522 CAGAACACCAGTCACTATGCC 58.649 52.381 0.00 0.00 0.00 4.40
2370 11578 2.687200 AGTCACTATGCCCGGCCA 60.687 61.111 7.03 0.00 0.00 5.36
2394 11602 0.962356 CCCTTGACCTGTCACCATGC 60.962 60.000 0.00 0.00 39.66 4.06
2413 11621 1.003355 ACCATGACCGTTGCAGAGG 60.003 57.895 7.85 7.85 0.00 3.69
2439 11647 0.476338 TGCCCTGTCTTAAGCACCAA 59.524 50.000 0.00 0.00 0.00 3.67
2476 11684 2.680841 GCTGGCACATACATTCCGTTTA 59.319 45.455 0.00 0.00 38.20 2.01
2496 11704 1.207593 GCACACACATTGCTCGTCC 59.792 57.895 0.00 0.00 37.00 4.79
2497 11705 1.230635 GCACACACATTGCTCGTCCT 61.231 55.000 0.00 0.00 37.00 3.85
2498 11706 0.792640 CACACACATTGCTCGTCCTC 59.207 55.000 0.00 0.00 0.00 3.71
2499 11707 0.681733 ACACACATTGCTCGTCCTCT 59.318 50.000 0.00 0.00 0.00 3.69
2500 11708 1.337260 ACACACATTGCTCGTCCTCTC 60.337 52.381 0.00 0.00 0.00 3.20
2501 11709 0.247736 ACACATTGCTCGTCCTCTCC 59.752 55.000 0.00 0.00 0.00 3.71
2502 11710 0.247460 CACATTGCTCGTCCTCTCCA 59.753 55.000 0.00 0.00 0.00 3.86
2503 11711 0.247736 ACATTGCTCGTCCTCTCCAC 59.752 55.000 0.00 0.00 0.00 4.02
2504 11712 0.803768 CATTGCTCGTCCTCTCCACG 60.804 60.000 0.00 0.00 38.67 4.94
2505 11713 1.251527 ATTGCTCGTCCTCTCCACGT 61.252 55.000 0.00 0.00 38.45 4.49
2506 11714 1.461091 TTGCTCGTCCTCTCCACGTT 61.461 55.000 0.00 0.00 38.45 3.99
2507 11715 1.444553 GCTCGTCCTCTCCACGTTG 60.445 63.158 0.00 0.00 38.45 4.10
2508 11716 1.444553 CTCGTCCTCTCCACGTTGC 60.445 63.158 0.00 0.00 38.45 4.17
2509 11717 2.805353 CGTCCTCTCCACGTTGCG 60.805 66.667 0.00 0.00 32.41 4.85
2510 11718 2.649034 GTCCTCTCCACGTTGCGA 59.351 61.111 0.00 0.00 0.00 5.10
2584 11792 2.584418 CTCCTCGTCGCCATGCTG 60.584 66.667 0.00 0.00 0.00 4.41
2592 11800 2.270205 CGCCATGCTGGTCCTCTT 59.730 61.111 4.45 0.00 40.46 2.85
2665 11873 1.149627 GTACACCAACTGCACCCCA 59.850 57.895 0.00 0.00 0.00 4.96
2698 11906 1.282930 GCGGGACACTCAAGTTCGAC 61.283 60.000 0.00 0.00 0.00 4.20
2701 11909 1.129326 GGACACTCAAGTTCGACGTG 58.871 55.000 0.00 0.00 0.00 4.49
2702 11910 1.129326 GACACTCAAGTTCGACGTGG 58.871 55.000 0.00 0.00 0.00 4.94
2710 11918 1.213799 GTTCGACGTGGACTACCCC 59.786 63.158 0.00 0.00 34.81 4.95
2713 11921 1.214589 CGACGTGGACTACCCCTTG 59.785 63.158 0.00 0.00 34.81 3.61
2716 11924 2.589157 CGTGGACTACCCCTTGGCA 61.589 63.158 0.00 0.00 34.81 4.92
2722 11930 0.617820 ACTACCCCTTGGCAGTCGAT 60.618 55.000 0.00 0.00 32.37 3.59
2725 11933 2.671070 CCCTTGGCAGTCGATGGT 59.329 61.111 0.00 0.00 0.00 3.55
2781 11989 1.279840 GCCTCTTGTGCGTGAACAC 59.720 57.895 0.00 0.00 41.10 3.32
2783 11991 0.532862 CCTCTTGTGCGTGAACACCT 60.533 55.000 0.00 0.00 39.93 4.00
2786 11997 1.151777 CTTGTGCGTGAACACCTCGT 61.152 55.000 0.00 0.00 39.93 4.18
2836 12047 2.501128 CAGGTCACGGGCATCGAT 59.499 61.111 5.71 0.00 42.43 3.59
2871 12082 0.179161 CTCACCGTGATCGACCAGAC 60.179 60.000 0.62 0.00 39.71 3.51
2873 12084 1.605451 ACCGTGATCGACCAGACCA 60.605 57.895 0.00 0.00 39.71 4.02
2875 12086 1.029681 CCGTGATCGACCAGACCATA 58.970 55.000 0.00 0.00 39.71 2.74
2890 12101 1.227380 CATAGCCCACGAGTCAGCC 60.227 63.158 0.00 0.00 0.00 4.85
2899 12110 4.479993 GAGTCAGCCTGCCCGCAT 62.480 66.667 0.00 0.00 0.00 4.73
2953 12164 2.117156 CGAGTACACGGACCGGGAT 61.117 63.158 26.07 9.91 32.98 3.85
2982 12193 0.319900 ACAGCCTACGTGAACTGCAG 60.320 55.000 13.48 13.48 33.35 4.41
3004 12215 4.819761 GCCAGATCGTCGCTGCCA 62.820 66.667 0.00 0.00 32.06 4.92
3058 12269 1.097547 GGCGGTCGTACTACAGGCTA 61.098 60.000 14.90 0.00 37.20 3.93
3065 12276 3.438087 GTCGTACTACAGGCTAGACAACA 59.562 47.826 0.00 0.00 0.00 3.33
3073 12284 1.014564 GGCTAGACAACAGCACGTCC 61.015 60.000 0.00 0.00 40.95 4.79
3111 12322 4.974721 CCTGGGGGTGGTGTGCAC 62.975 72.222 10.75 10.75 0.00 4.57
3132 12343 3.946907 GACTTTGGTCGTCCCGTG 58.053 61.111 0.00 0.00 35.15 4.94
3220 12431 2.203788 TCGGTGAGGTGGAAGGCT 60.204 61.111 0.00 0.00 0.00 4.58
3221 12432 2.046892 CGGTGAGGTGGAAGGCTG 60.047 66.667 0.00 0.00 0.00 4.85
3222 12433 2.352805 GGTGAGGTGGAAGGCTGG 59.647 66.667 0.00 0.00 0.00 4.85
3223 12434 2.360475 GTGAGGTGGAAGGCTGGC 60.360 66.667 0.00 0.00 0.00 4.85
3224 12435 4.020617 TGAGGTGGAAGGCTGGCG 62.021 66.667 0.00 0.00 0.00 5.69
3345 12562 1.080705 GGTCGTGTCCTTCGTCAGG 60.081 63.158 0.00 0.00 45.64 3.86
3362 12579 1.190178 AGGTTCAGGTACCCCGTGTC 61.190 60.000 8.74 0.00 39.08 3.67
3363 12580 1.294459 GTTCAGGTACCCCGTGTCC 59.706 63.158 8.74 0.00 35.12 4.02
3367 12597 1.911766 AGGTACCCCGTGTCCACTG 60.912 63.158 8.74 0.00 35.12 3.66
3403 12633 5.708948 TGTTCGATTCATCCAAAATGTTCC 58.291 37.500 0.00 0.00 0.00 3.62
3415 12648 0.958822 AATGTTCCGGTCAGCCAAAC 59.041 50.000 0.00 0.00 33.25 2.93
3432 12665 3.243839 CCAAACTCAGGGACATGGTTTTG 60.244 47.826 0.00 3.80 0.00 2.44
3470 12703 3.250280 TGGTTTACGATTACTTGCGCAAA 59.750 39.130 25.01 10.16 0.00 3.68
3522 12756 8.008513 TCCTGACTAATCTATTAACTGGTCAC 57.991 38.462 0.00 0.00 0.00 3.67
3523 12757 7.839705 TCCTGACTAATCTATTAACTGGTCACT 59.160 37.037 0.00 0.00 0.00 3.41
3524 12758 7.923344 CCTGACTAATCTATTAACTGGTCACTG 59.077 40.741 0.00 0.00 0.00 3.66
3525 12759 7.782049 TGACTAATCTATTAACTGGTCACTGG 58.218 38.462 0.00 0.00 0.00 4.00
3526 12760 7.399191 TGACTAATCTATTAACTGGTCACTGGT 59.601 37.037 0.00 0.00 0.00 4.00
3527 12761 7.783042 ACTAATCTATTAACTGGTCACTGGTC 58.217 38.462 0.00 0.00 0.00 4.02
3528 12762 6.620877 AATCTATTAACTGGTCACTGGTCA 57.379 37.500 0.00 0.00 0.00 4.02
3529 12763 5.661056 TCTATTAACTGGTCACTGGTCAG 57.339 43.478 0.00 0.00 34.91 3.51
3530 12764 2.543777 TTAACTGGTCACTGGTCAGC 57.456 50.000 0.00 0.00 32.19 4.26
3531 12765 1.717032 TAACTGGTCACTGGTCAGCT 58.283 50.000 0.00 0.00 32.19 4.24
3532 12766 0.107456 AACTGGTCACTGGTCAGCTG 59.893 55.000 7.63 7.63 32.19 4.24
3533 12767 1.670406 CTGGTCACTGGTCAGCTGC 60.670 63.158 9.47 4.04 0.00 5.25
3534 12768 2.359230 GGTCACTGGTCAGCTGCC 60.359 66.667 9.47 14.32 0.00 4.85
3535 12769 2.359230 GTCACTGGTCAGCTGCCC 60.359 66.667 20.12 15.17 0.00 5.36
3536 12770 2.848679 TCACTGGTCAGCTGCCCA 60.849 61.111 16.99 16.99 0.00 5.36
3537 12771 2.226315 TCACTGGTCAGCTGCCCAT 61.226 57.895 18.38 4.91 0.00 4.00
3538 12772 0.909133 TCACTGGTCAGCTGCCCATA 60.909 55.000 18.38 3.11 0.00 2.74
3539 12773 0.035152 CACTGGTCAGCTGCCCATAA 60.035 55.000 18.38 0.00 0.00 1.90
3540 12774 0.921896 ACTGGTCAGCTGCCCATAAT 59.078 50.000 18.38 3.07 0.00 1.28
3541 12775 1.315690 CTGGTCAGCTGCCCATAATG 58.684 55.000 18.38 1.09 0.00 1.90
3542 12776 0.106569 TGGTCAGCTGCCCATAATGG 60.107 55.000 13.62 0.00 37.25 3.16
3665 12899 8.965819 ACCTTATTAATTGACATGCATAACACA 58.034 29.630 0.00 0.00 0.00 3.72
3666 12900 9.800433 CCTTATTAATTGACATGCATAACACAA 57.200 29.630 0.00 4.29 0.00 3.33
3674 12908 9.787532 ATTGACATGCATAACACAAAATAGTAC 57.212 29.630 0.00 0.00 0.00 2.73
3675 12909 8.329203 TGACATGCATAACACAAAATAGTACA 57.671 30.769 0.00 0.00 0.00 2.90
3676 12910 8.787852 TGACATGCATAACACAAAATAGTACAA 58.212 29.630 0.00 0.00 0.00 2.41
3677 12911 8.964420 ACATGCATAACACAAAATAGTACAAC 57.036 30.769 0.00 0.00 0.00 3.32
3678 12912 8.572185 ACATGCATAACACAAAATAGTACAACA 58.428 29.630 0.00 0.00 0.00 3.33
3679 12913 9.571810 CATGCATAACACAAAATAGTACAACAT 57.428 29.630 0.00 0.00 0.00 2.71
3681 12915 9.973450 TGCATAACACAAAATAGTACAACATTT 57.027 25.926 0.00 0.00 0.00 2.32
3699 12933 9.866655 ACAACATTTAATATGATACCACATCCT 57.133 29.630 0.00 0.00 0.00 3.24
3702 12936 9.950496 ACATTTAATATGATACCACATCCTCTC 57.050 33.333 0.00 0.00 0.00 3.20
3761 12995 9.520204 AAGTTTAAATGTCATGCATAATACTGC 57.480 29.630 0.00 0.00 42.62 4.40
3762 12996 8.906867 AGTTTAAATGTCATGCATAATACTGCT 58.093 29.630 0.00 0.00 42.75 4.24
3763 12997 9.520204 GTTTAAATGTCATGCATAATACTGCTT 57.480 29.630 0.00 0.00 42.75 3.91
3767 13001 8.625786 AATGTCATGCATAATACTGCTTATGA 57.374 30.769 0.00 0.00 42.75 2.15
3768 13002 8.803397 ATGTCATGCATAATACTGCTTATGAT 57.197 30.769 0.00 3.82 42.75 2.45
3769 13003 9.895138 ATGTCATGCATAATACTGCTTATGATA 57.105 29.630 0.00 2.02 42.75 2.15
3770 13004 9.154847 TGTCATGCATAATACTGCTTATGATAC 57.845 33.333 0.00 6.49 42.75 2.24
3771 13005 9.376075 GTCATGCATAATACTGCTTATGATACT 57.624 33.333 0.00 0.00 42.75 2.12
3774 13008 9.823647 ATGCATAATACTGCTTATGATACTACC 57.176 33.333 0.00 0.00 42.75 3.18
3775 13009 8.811994 TGCATAATACTGCTTATGATACTACCA 58.188 33.333 12.28 0.00 42.75 3.25
3776 13010 9.823647 GCATAATACTGCTTATGATACTACCAT 57.176 33.333 12.28 0.00 40.15 3.55
3780 13014 9.856488 AATACTGCTTATGATACTACCATTACG 57.144 33.333 0.00 0.00 0.00 3.18
3781 13015 7.520451 ACTGCTTATGATACTACCATTACGA 57.480 36.000 0.00 0.00 0.00 3.43
3782 13016 7.368833 ACTGCTTATGATACTACCATTACGAC 58.631 38.462 0.00 0.00 0.00 4.34
3783 13017 6.684686 TGCTTATGATACTACCATTACGACC 58.315 40.000 0.00 0.00 0.00 4.79
3784 13018 6.265876 TGCTTATGATACTACCATTACGACCA 59.734 38.462 0.00 0.00 0.00 4.02
3785 13019 6.807230 GCTTATGATACTACCATTACGACCAG 59.193 42.308 0.00 0.00 0.00 4.00
3786 13020 7.523380 GCTTATGATACTACCATTACGACCAGT 60.523 40.741 0.00 0.00 0.00 4.00
3787 13021 5.762825 TGATACTACCATTACGACCAGTC 57.237 43.478 0.00 0.00 0.00 3.51
3822 13064 0.778815 CTTCGACGCTGACACTTCAC 59.221 55.000 0.00 0.00 0.00 3.18
3824 13066 2.365068 CGACGCTGACACTTCACCG 61.365 63.158 0.00 0.00 36.95 4.94
3826 13068 0.388649 GACGCTGACACTTCACCGAT 60.389 55.000 0.00 0.00 34.89 4.18
3835 13077 5.407502 TGACACTTCACCGATAAGTATGTG 58.592 41.667 0.00 0.00 35.44 3.21
3917 13162 8.838365 CAAACGAGGTAGTACTATGAACTAGAT 58.162 37.037 5.75 0.00 30.26 1.98
4076 13602 8.424274 ACATTTCCTTTTGTCATTGAAAGAAC 57.576 30.769 0.00 0.00 35.41 3.01
4305 13833 1.079750 GCTTCTCCTCGTGGTGTCC 60.080 63.158 2.99 0.00 34.23 4.02
4315 13843 0.388134 CGTGGTGTCCTTCCTGTACG 60.388 60.000 0.00 0.00 0.00 3.67
4347 13875 1.834263 AGGCAGTACAAGATGACCTCC 59.166 52.381 0.00 0.00 0.00 4.30
5134 14893 1.901085 GACGAGATCAACCTGGCCT 59.099 57.895 3.32 0.00 0.00 5.19
5316 15075 2.333417 GGTGCTCGACGGTCTCAGA 61.333 63.158 6.57 0.00 0.00 3.27
5485 15492 0.257039 CCCTGCTCCTGCCATACTTT 59.743 55.000 0.00 0.00 38.71 2.66
5511 15518 1.202533 CGATCTCCCTGTTGCCGTTAT 60.203 52.381 0.00 0.00 0.00 1.89
5597 15604 6.811665 CGATTTCATACCTGTAAGTTCTCACA 59.188 38.462 0.00 0.00 0.00 3.58
5637 15644 4.951715 TCGTTTAGGTGGTCTAATGCTAGA 59.048 41.667 0.00 0.00 37.74 2.43
5721 15728 0.322277 CTTGGGACAGCATGAGCACT 60.322 55.000 0.00 0.00 45.49 4.40
5724 15731 0.807667 GGGACAGCATGAGCACTACG 60.808 60.000 0.00 0.00 45.49 3.51
5786 15806 2.284921 CACCTCCCCTCCTCAGCA 60.285 66.667 0.00 0.00 0.00 4.41
5854 15874 5.116680 CGAAAACTTGTAACTCGTCCTAGTG 59.883 44.000 0.00 0.00 0.00 2.74
5863 15883 3.714391 ACTCGTCCTAGTGTGTTGTTTC 58.286 45.455 0.00 0.00 0.00 2.78
5932 15953 3.679980 CACCTGAACCGTCTGATTACAAG 59.320 47.826 0.00 0.00 0.00 3.16
5944 15965 7.222999 CCGTCTGATTACAAGATCTAAAGGTTC 59.777 40.741 0.00 0.00 0.00 3.62
5945 15966 7.759886 CGTCTGATTACAAGATCTAAAGGTTCA 59.240 37.037 0.00 0.00 0.00 3.18
5994 16026 1.387084 GTTGAGTTCGCTAAGCACTCG 59.613 52.381 0.00 0.00 0.00 4.18
5996 16028 0.802607 GAGTTCGCTAAGCACTCGGG 60.803 60.000 0.00 0.00 0.00 5.14
6020 16052 5.811100 GTCCAACACTAACTAGTAGAATGCC 59.189 44.000 3.59 0.00 34.13 4.40
6031 16063 4.776647 GAATGCCCGTGCGTTGCC 62.777 66.667 0.86 0.00 46.55 4.52
6097 16129 0.613260 TCATCTTGGGACCCTTGTCG 59.387 55.000 13.00 0.00 42.73 4.35
6100 16132 0.613260 TCTTGGGACCCTTGTCGATG 59.387 55.000 13.00 0.00 42.73 3.84
6112 16144 4.095483 CCCTTGTCGATGGATCTTTTTGAG 59.905 45.833 0.00 0.00 0.00 3.02
6132 16183 8.948631 TTTGAGCGTCTCTCTCATAATTAAAT 57.051 30.769 8.07 0.00 42.38 1.40
6224 16300 3.435186 GCACAGGAGCCCGCTTTC 61.435 66.667 0.00 0.00 0.00 2.62
6259 16335 1.293498 CTGGCCGCAGAACAGTAGT 59.707 57.895 0.00 0.00 0.00 2.73
6271 16347 1.005037 CAGTAGTGAGCCGGCAACA 60.005 57.895 31.54 24.72 0.00 3.33
6272 16348 0.391661 CAGTAGTGAGCCGGCAACAT 60.392 55.000 31.54 14.43 0.00 2.71
6287 16363 2.266070 ACATTGGGCATGTTCCACG 58.734 52.632 9.02 6.79 44.40 4.94
6288 16364 1.250154 ACATTGGGCATGTTCCACGG 61.250 55.000 9.02 7.33 44.40 4.94
6303 16379 2.158652 TCCACGGGAACAATTTGTACCA 60.159 45.455 18.01 2.16 30.63 3.25
6308 16384 3.566322 CGGGAACAATTTGTACCAGAACA 59.434 43.478 18.01 0.00 30.63 3.18
6311 16387 4.261867 GGAACAATTTGTACCAGAACACCC 60.262 45.833 1.76 0.00 0.00 4.61
6313 16389 4.542697 ACAATTTGTACCAGAACACCCTT 58.457 39.130 0.00 0.00 0.00 3.95
6314 16390 4.583073 ACAATTTGTACCAGAACACCCTTC 59.417 41.667 0.00 0.00 0.00 3.46
6327 16427 1.371183 CCCTTCGAGAGGCACAACA 59.629 57.895 7.82 0.00 44.85 3.33
6330 16430 0.249868 CTTCGAGAGGCACAACACCA 60.250 55.000 0.00 0.00 0.00 4.17
6338 16438 2.633657 CACAACACCACAGCTCGC 59.366 61.111 0.00 0.00 0.00 5.03
6340 16440 2.661537 CAACACCACAGCTCGCGA 60.662 61.111 9.26 9.26 0.00 5.87
6362 16462 3.641906 ACACTAGCTAGAACACCAACTGT 59.358 43.478 27.45 13.99 32.89 3.55
6375 16475 1.668919 CCAACTGTAGCGACACGATGT 60.669 52.381 0.00 0.00 0.00 3.06
6393 16493 1.026182 GTTGCATGACATGGAGGCGA 61.026 55.000 17.03 0.00 0.00 5.54
6394 16494 0.107066 TTGCATGACATGGAGGCGAT 60.107 50.000 17.03 0.00 0.00 4.58
6397 16497 1.596203 ATGACATGGAGGCGATGCG 60.596 57.895 0.00 0.00 0.00 4.73
6416 16528 2.681778 AGCGCCCTACACTGAGCT 60.682 61.111 2.29 0.00 0.00 4.09
6430 16542 1.078848 GAGCTTGACCACGGCAGAT 60.079 57.895 0.00 0.00 0.00 2.90
6440 16552 1.138859 CCACGGCAGATAGAACCATGA 59.861 52.381 0.00 0.00 0.00 3.07
6443 16555 1.221414 GGCAGATAGAACCATGACGC 58.779 55.000 0.00 0.00 0.00 5.19
6453 16565 2.246739 CCATGACGCTGCCCATACG 61.247 63.158 0.00 0.00 0.00 3.06
6456 16568 2.511600 GACGCTGCCCATACGCTT 60.512 61.111 0.00 0.00 0.00 4.68
6460 16572 1.450312 GCTGCCCATACGCTTGAGT 60.450 57.895 0.00 0.00 0.00 3.41
6465 16577 0.824109 CCCATACGCTTGAGTGAGGA 59.176 55.000 0.00 0.00 0.00 3.71
6527 16639 8.755028 ACTTAACCCAAACAGAGTTTTGTAAAT 58.245 29.630 0.00 0.00 35.09 1.40
6547 16659 6.484364 AAATGTGGTTTCTTGATCCAAACT 57.516 33.333 10.28 0.00 33.70 2.66
6551 16663 6.126409 TGTGGTTTCTTGATCCAAACTAAGT 58.874 36.000 10.28 0.00 33.70 2.24
6559 16671 7.988737 TCTTGATCCAAACTAAGTATTGCATG 58.011 34.615 0.00 0.00 0.00 4.06
6560 16672 7.828717 TCTTGATCCAAACTAAGTATTGCATGA 59.171 33.333 0.00 0.00 0.00 3.07
6561 16673 7.936496 TGATCCAAACTAAGTATTGCATGAA 57.064 32.000 0.00 0.00 0.00 2.57
6562 16674 8.523915 TGATCCAAACTAAGTATTGCATGAAT 57.476 30.769 0.00 0.00 0.00 2.57
6563 16675 8.407832 TGATCCAAACTAAGTATTGCATGAATG 58.592 33.333 0.00 0.00 0.00 2.67
6564 16676 7.701539 TCCAAACTAAGTATTGCATGAATGT 57.298 32.000 0.00 0.00 0.00 2.71
6565 16677 8.800370 TCCAAACTAAGTATTGCATGAATGTA 57.200 30.769 0.00 0.00 0.00 2.29
6566 16678 9.407380 TCCAAACTAAGTATTGCATGAATGTAT 57.593 29.630 0.00 0.00 0.00 2.29
6567 16679 9.454585 CCAAACTAAGTATTGCATGAATGTATG 57.545 33.333 0.00 0.00 0.00 2.39
6612 16724 6.200878 ACTAGTTTCCTCAAATTTCTCCCA 57.799 37.500 0.00 0.00 0.00 4.37
6617 16729 7.805163 AGTTTCCTCAAATTTCTCCCAAAAAT 58.195 30.769 0.00 0.00 0.00 1.82
6618 16730 8.274322 AGTTTCCTCAAATTTCTCCCAAAAATT 58.726 29.630 0.00 0.00 37.80 1.82
6619 16731 8.559536 GTTTCCTCAAATTTCTCCCAAAAATTC 58.440 33.333 0.00 0.00 35.75 2.17
6620 16732 7.616528 TCCTCAAATTTCTCCCAAAAATTCT 57.383 32.000 0.00 0.00 35.75 2.40
6621 16733 8.719645 TCCTCAAATTTCTCCCAAAAATTCTA 57.280 30.769 0.00 0.00 35.75 2.10
6622 16734 9.153479 TCCTCAAATTTCTCCCAAAAATTCTAA 57.847 29.630 0.00 0.00 35.75 2.10
6623 16735 9.777297 CCTCAAATTTCTCCCAAAAATTCTAAA 57.223 29.630 0.00 0.00 35.75 1.85
6643 16755 9.959721 TTCTAAATCTATGAAAAGTTGCTAGGT 57.040 29.630 0.00 0.00 0.00 3.08
6646 16758 8.507524 AAATCTATGAAAAGTTGCTAGGTACC 57.492 34.615 2.73 2.73 0.00 3.34
6647 16759 5.657474 TCTATGAAAAGTTGCTAGGTACCG 58.343 41.667 6.18 0.00 0.00 4.02
6648 16760 2.419667 TGAAAAGTTGCTAGGTACCGC 58.580 47.619 6.18 5.47 0.00 5.68
6649 16761 2.224329 TGAAAAGTTGCTAGGTACCGCA 60.224 45.455 10.11 10.11 33.54 5.69
6650 16762 2.781681 AAAGTTGCTAGGTACCGCAT 57.218 45.000 14.29 0.00 35.32 4.73
6651 16763 2.311124 AAGTTGCTAGGTACCGCATC 57.689 50.000 14.29 13.28 35.32 3.91
6652 16764 1.191535 AGTTGCTAGGTACCGCATCA 58.808 50.000 19.05 9.39 35.32 3.07
6653 16765 1.762957 AGTTGCTAGGTACCGCATCAT 59.237 47.619 19.05 6.78 35.32 2.45
6654 16766 2.963101 AGTTGCTAGGTACCGCATCATA 59.037 45.455 19.05 3.58 35.32 2.15
6655 16767 3.386726 AGTTGCTAGGTACCGCATCATAA 59.613 43.478 19.05 3.28 35.32 1.90
6656 16768 4.040461 AGTTGCTAGGTACCGCATCATAAT 59.960 41.667 19.05 3.08 35.32 1.28
6657 16769 4.617253 TGCTAGGTACCGCATCATAATT 57.383 40.909 10.11 0.00 30.46 1.40
6658 16770 5.731957 TGCTAGGTACCGCATCATAATTA 57.268 39.130 10.11 0.00 30.46 1.40
6659 16771 6.104146 TGCTAGGTACCGCATCATAATTAA 57.896 37.500 10.11 0.00 30.46 1.40
6660 16772 6.707290 TGCTAGGTACCGCATCATAATTAAT 58.293 36.000 10.11 0.00 30.46 1.40
6661 16773 6.816640 TGCTAGGTACCGCATCATAATTAATC 59.183 38.462 10.11 0.00 30.46 1.75
6662 16774 7.042335 GCTAGGTACCGCATCATAATTAATCT 58.958 38.462 6.18 0.00 0.00 2.40
6663 16775 8.195436 GCTAGGTACCGCATCATAATTAATCTA 58.805 37.037 6.18 0.00 0.00 1.98
6665 16777 8.773404 AGGTACCGCATCATAATTAATCTAAC 57.227 34.615 6.18 0.00 0.00 2.34
6666 16778 8.594550 AGGTACCGCATCATAATTAATCTAACT 58.405 33.333 6.18 0.00 0.00 2.24
6667 16779 9.865321 GGTACCGCATCATAATTAATCTAACTA 57.135 33.333 0.00 0.00 0.00 2.24
6708 16820 6.701432 AAAAATGCTAGTGTGTCGTAGTAC 57.299 37.500 0.00 0.00 0.00 2.73
6709 16821 5.640189 AAATGCTAGTGTGTCGTAGTACT 57.360 39.130 0.00 0.00 0.00 2.73
6710 16822 5.640189 AATGCTAGTGTGTCGTAGTACTT 57.360 39.130 0.00 0.00 0.00 2.24
6711 16823 6.748333 AATGCTAGTGTGTCGTAGTACTTA 57.252 37.500 0.00 0.00 0.00 2.24
6712 16824 5.536554 TGCTAGTGTGTCGTAGTACTTAC 57.463 43.478 0.00 0.00 0.00 2.34
6713 16825 4.996758 TGCTAGTGTGTCGTAGTACTTACA 59.003 41.667 0.00 0.72 32.27 2.41
6714 16826 5.469760 TGCTAGTGTGTCGTAGTACTTACAA 59.530 40.000 0.00 0.00 32.27 2.41
6715 16827 5.792468 GCTAGTGTGTCGTAGTACTTACAAC 59.208 44.000 0.00 5.59 32.27 3.32
6716 16828 5.756195 AGTGTGTCGTAGTACTTACAACA 57.244 39.130 0.00 0.00 32.27 3.33
6717 16829 6.323203 AGTGTGTCGTAGTACTTACAACAT 57.677 37.500 0.00 0.00 32.27 2.71
6718 16830 6.742109 AGTGTGTCGTAGTACTTACAACATT 58.258 36.000 0.00 0.00 32.27 2.71
6719 16831 7.874940 AGTGTGTCGTAGTACTTACAACATTA 58.125 34.615 0.00 0.00 32.27 1.90
6720 16832 8.517878 AGTGTGTCGTAGTACTTACAACATTAT 58.482 33.333 0.00 0.00 32.27 1.28
6721 16833 8.792538 GTGTGTCGTAGTACTTACAACATTATC 58.207 37.037 0.00 0.00 32.27 1.75
6722 16834 8.733458 TGTGTCGTAGTACTTACAACATTATCT 58.267 33.333 0.00 0.00 32.27 1.98
6723 16835 9.219497 GTGTCGTAGTACTTACAACATTATCTC 57.781 37.037 0.00 0.00 32.27 2.75
6724 16836 8.949177 TGTCGTAGTACTTACAACATTATCTCA 58.051 33.333 0.00 0.00 32.27 3.27
6725 16837 9.219497 GTCGTAGTACTTACAACATTATCTCAC 57.781 37.037 0.00 0.00 32.27 3.51
6726 16838 8.949177 TCGTAGTACTTACAACATTATCTCACA 58.051 33.333 0.00 0.00 32.27 3.58
6727 16839 9.563898 CGTAGTACTTACAACATTATCTCACAA 57.436 33.333 0.00 0.00 32.27 3.33
6730 16842 9.424319 AGTACTTACAACATTATCTCACAACTG 57.576 33.333 0.00 0.00 0.00 3.16
6731 16843 9.419297 GTACTTACAACATTATCTCACAACTGA 57.581 33.333 0.00 0.00 0.00 3.41
6732 16844 8.902540 ACTTACAACATTATCTCACAACTGAA 57.097 30.769 0.00 0.00 0.00 3.02
6733 16845 8.993121 ACTTACAACATTATCTCACAACTGAAG 58.007 33.333 0.00 0.00 0.00 3.02
6734 16846 8.902540 TTACAACATTATCTCACAACTGAAGT 57.097 30.769 0.00 0.00 0.00 3.01
6735 16847 9.990360 TTACAACATTATCTCACAACTGAAGTA 57.010 29.630 0.00 0.00 0.00 2.24
6736 16848 8.539770 ACAACATTATCTCACAACTGAAGTAG 57.460 34.615 0.00 0.00 0.00 2.57
6737 16849 7.604164 ACAACATTATCTCACAACTGAAGTAGG 59.396 37.037 0.00 0.00 0.00 3.18
6738 16850 7.482169 ACATTATCTCACAACTGAAGTAGGA 57.518 36.000 0.00 0.00 0.00 2.94
6739 16851 7.551585 ACATTATCTCACAACTGAAGTAGGAG 58.448 38.462 0.00 0.00 0.00 3.69
6740 16852 7.397476 ACATTATCTCACAACTGAAGTAGGAGA 59.603 37.037 9.62 9.62 35.01 3.71
6741 16853 5.913137 ATCTCACAACTGAAGTAGGAGAG 57.087 43.478 11.71 8.14 34.46 3.20
6742 16854 4.986783 TCTCACAACTGAAGTAGGAGAGA 58.013 43.478 7.58 7.58 31.85 3.10
6743 16855 5.386060 TCTCACAACTGAAGTAGGAGAGAA 58.614 41.667 8.63 0.00 31.60 2.87
6744 16856 5.833667 TCTCACAACTGAAGTAGGAGAGAAA 59.166 40.000 8.63 0.00 31.60 2.52
6745 16857 5.844004 TCACAACTGAAGTAGGAGAGAAAC 58.156 41.667 0.00 0.00 0.00 2.78
6746 16858 5.362717 TCACAACTGAAGTAGGAGAGAAACA 59.637 40.000 0.00 0.00 0.00 2.83
6747 16859 5.694006 CACAACTGAAGTAGGAGAGAAACAG 59.306 44.000 0.00 0.00 0.00 3.16
6748 16860 5.598830 ACAACTGAAGTAGGAGAGAAACAGA 59.401 40.000 0.00 0.00 0.00 3.41
6749 16861 6.098409 ACAACTGAAGTAGGAGAGAAACAGAA 59.902 38.462 0.00 0.00 0.00 3.02
6750 16862 6.732896 ACTGAAGTAGGAGAGAAACAGAAA 57.267 37.500 0.00 0.00 0.00 2.52
6751 16863 7.125792 ACTGAAGTAGGAGAGAAACAGAAAA 57.874 36.000 0.00 0.00 0.00 2.29
6752 16864 7.565680 ACTGAAGTAGGAGAGAAACAGAAAAA 58.434 34.615 0.00 0.00 0.00 1.94
6784 16896 7.241663 CAAATGATTTTGGCATAGGTCAATG 57.758 36.000 0.00 0.00 38.64 2.82
6785 16897 5.540400 ATGATTTTGGCATAGGTCAATGG 57.460 39.130 0.00 0.00 38.64 3.16
6786 16898 4.352009 TGATTTTGGCATAGGTCAATGGT 58.648 39.130 0.00 0.00 38.64 3.55
6787 16899 5.514169 TGATTTTGGCATAGGTCAATGGTA 58.486 37.500 0.00 0.00 38.64 3.25
6788 16900 5.954752 TGATTTTGGCATAGGTCAATGGTAA 59.045 36.000 0.00 0.00 38.64 2.85
6789 16901 6.438741 TGATTTTGGCATAGGTCAATGGTAAA 59.561 34.615 0.00 0.00 38.64 2.01
6790 16902 5.913137 TTTGGCATAGGTCAATGGTAAAG 57.087 39.130 0.00 0.00 38.64 1.85
6791 16903 3.897239 TGGCATAGGTCAATGGTAAAGG 58.103 45.455 0.00 0.00 0.00 3.11
6792 16904 2.623416 GGCATAGGTCAATGGTAAAGGC 59.377 50.000 0.00 0.00 0.00 4.35
6793 16905 3.287222 GCATAGGTCAATGGTAAAGGCA 58.713 45.455 0.00 0.00 0.00 4.75
6794 16906 3.891366 GCATAGGTCAATGGTAAAGGCAT 59.109 43.478 0.00 0.00 0.00 4.40
6795 16907 4.342092 GCATAGGTCAATGGTAAAGGCATT 59.658 41.667 0.00 0.00 0.00 3.56
6796 16908 5.163416 GCATAGGTCAATGGTAAAGGCATTT 60.163 40.000 0.53 0.53 0.00 2.32
6797 16909 6.630188 GCATAGGTCAATGGTAAAGGCATTTT 60.630 38.462 0.00 0.00 0.00 1.82
6798 16910 5.151297 AGGTCAATGGTAAAGGCATTTTG 57.849 39.130 0.00 0.00 0.00 2.44
6799 16911 4.020307 AGGTCAATGGTAAAGGCATTTTGG 60.020 41.667 0.00 0.00 0.00 3.28
6800 16912 4.262851 GGTCAATGGTAAAGGCATTTTGGT 60.263 41.667 0.00 0.00 0.00 3.67
6801 16913 5.046950 GGTCAATGGTAAAGGCATTTTGGTA 60.047 40.000 0.00 0.00 0.00 3.25
6802 16914 6.351796 GGTCAATGGTAAAGGCATTTTGGTAT 60.352 38.462 0.00 0.00 0.00 2.73
6803 16915 7.147811 GGTCAATGGTAAAGGCATTTTGGTATA 60.148 37.037 0.00 0.00 0.00 1.47
6804 16916 7.920682 GTCAATGGTAAAGGCATTTTGGTATAG 59.079 37.037 0.00 0.00 0.00 1.31
6805 16917 5.845391 TGGTAAAGGCATTTTGGTATAGC 57.155 39.130 0.00 0.00 0.00 2.97
6806 16918 5.265191 TGGTAAAGGCATTTTGGTATAGCA 58.735 37.500 0.00 0.00 0.00 3.49
6807 16919 5.717178 TGGTAAAGGCATTTTGGTATAGCAA 59.283 36.000 13.22 13.22 0.00 3.91
6808 16920 6.211584 TGGTAAAGGCATTTTGGTATAGCAAA 59.788 34.615 22.77 22.77 0.00 3.68
6809 16921 6.756542 GGTAAAGGCATTTTGGTATAGCAAAG 59.243 38.462 24.55 17.37 0.00 2.77
6810 16922 6.358974 AAAGGCATTTTGGTATAGCAAAGT 57.641 33.333 24.55 20.77 0.00 2.66
6811 16923 6.358974 AAGGCATTTTGGTATAGCAAAGTT 57.641 33.333 24.55 16.11 0.00 2.66
6812 16924 5.723295 AGGCATTTTGGTATAGCAAAGTTG 58.277 37.500 24.55 24.25 0.00 3.16
6813 16925 5.245977 AGGCATTTTGGTATAGCAAAGTTGT 59.754 36.000 24.55 12.96 0.00 3.32
6814 16926 6.435904 AGGCATTTTGGTATAGCAAAGTTGTA 59.564 34.615 24.55 13.71 0.00 2.41
6815 16927 7.039363 AGGCATTTTGGTATAGCAAAGTTGTAA 60.039 33.333 24.55 13.10 0.00 2.41
6816 16928 7.763985 GGCATTTTGGTATAGCAAAGTTGTAAT 59.236 33.333 24.55 14.51 0.00 1.89
6817 16929 9.796120 GCATTTTGGTATAGCAAAGTTGTAATA 57.204 29.630 24.55 11.89 0.00 0.98
6823 16935 9.727859 TGGTATAGCAAAGTTGTAATAACTTCA 57.272 29.630 1.19 0.00 39.36 3.02
6868 16980 9.799106 AAGTTCAAATTCTAATCTTTGAGAGGA 57.201 29.630 0.00 0.00 41.10 3.71
6869 16981 9.799106 AGTTCAAATTCTAATCTTTGAGAGGAA 57.201 29.630 0.00 0.00 41.10 3.36
6877 16989 8.651589 TCTAATCTTTGAGAGGAAGAACTACA 57.348 34.615 0.00 0.00 36.77 2.74
6878 16990 9.090103 TCTAATCTTTGAGAGGAAGAACTACAA 57.910 33.333 0.00 0.00 36.77 2.41
6879 16991 7.971183 AATCTTTGAGAGGAAGAACTACAAC 57.029 36.000 0.00 0.00 36.77 3.32
6880 16992 6.732896 TCTTTGAGAGGAAGAACTACAACT 57.267 37.500 0.00 0.00 30.60 3.16
6881 16993 7.125792 TCTTTGAGAGGAAGAACTACAACTT 57.874 36.000 0.00 0.00 30.60 2.66
6882 16994 6.986817 TCTTTGAGAGGAAGAACTACAACTTG 59.013 38.462 0.00 0.00 30.60 3.16
6883 16995 6.479972 TTGAGAGGAAGAACTACAACTTGA 57.520 37.500 0.00 0.00 0.00 3.02
6884 16996 6.479972 TGAGAGGAAGAACTACAACTTGAA 57.520 37.500 0.00 0.00 0.00 2.69
6885 16997 6.516718 TGAGAGGAAGAACTACAACTTGAAG 58.483 40.000 0.00 0.00 0.00 3.02
6886 16998 6.098409 TGAGAGGAAGAACTACAACTTGAAGT 59.902 38.462 0.00 0.00 0.00 3.01
6887 16999 6.517605 AGAGGAAGAACTACAACTTGAAGTC 58.482 40.000 0.00 0.00 0.00 3.01
6888 17000 6.098409 AGAGGAAGAACTACAACTTGAAGTCA 59.902 38.462 0.00 0.00 0.00 3.41
6889 17001 6.650120 AGGAAGAACTACAACTTGAAGTCAA 58.350 36.000 0.00 0.00 0.00 3.18
6890 17002 7.110155 AGGAAGAACTACAACTTGAAGTCAAA 58.890 34.615 0.00 0.00 35.15 2.69
6891 17003 7.775561 AGGAAGAACTACAACTTGAAGTCAAAT 59.224 33.333 0.00 0.00 35.15 2.32
6892 17004 8.070769 GGAAGAACTACAACTTGAAGTCAAATC 58.929 37.037 0.00 0.00 35.15 2.17
6893 17005 8.738645 AAGAACTACAACTTGAAGTCAAATCT 57.261 30.769 0.00 0.00 35.15 2.40
6894 17006 8.147642 AGAACTACAACTTGAAGTCAAATCTG 57.852 34.615 0.00 0.00 35.15 2.90
6895 17007 6.305693 ACTACAACTTGAAGTCAAATCTGC 57.694 37.500 0.00 0.00 35.15 4.26
6896 17008 5.822519 ACTACAACTTGAAGTCAAATCTGCA 59.177 36.000 0.00 0.00 35.15 4.41
6897 17009 5.581126 ACAACTTGAAGTCAAATCTGCAA 57.419 34.783 0.00 0.00 35.15 4.08
6898 17010 5.343249 ACAACTTGAAGTCAAATCTGCAAC 58.657 37.500 0.00 0.00 35.15 4.17
6899 17011 5.126061 ACAACTTGAAGTCAAATCTGCAACT 59.874 36.000 0.00 0.00 35.15 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.567159 GTCTATGGTGGTTTCGTCAATCTC 59.433 45.833 0.00 0.00 0.00 2.75
58 3089 6.384224 GTTTTCAGTGATGCTCATTCATTGA 58.616 36.000 0.00 0.00 0.00 2.57
98 3129 1.302511 ACCGGTGCTCGCAATTCTT 60.303 52.632 6.12 0.00 37.59 2.52
114 3145 2.031870 AGGGTTCAAGTCTTTTGCACC 58.968 47.619 0.90 0.90 35.44 5.01
157 3193 4.104261 AGCTTAGTTGAGGTGGTTAGGTTT 59.896 41.667 0.00 0.00 0.00 3.27
177 3213 6.319658 TGAAAATCAAGTGAAAGAACTGAGCT 59.680 34.615 0.00 0.00 0.00 4.09
271 3309 2.069273 ACGCTCGTTGGAGAAAGAATG 58.931 47.619 0.00 0.00 43.27 2.67
351 3389 4.442753 GGAGTTCATTCACCTCTCTGATCC 60.443 50.000 0.00 0.00 0.00 3.36
367 3405 2.435372 AAACTTGCAGGTGGAGTTCA 57.565 45.000 0.65 0.00 32.79 3.18
368 3406 2.687935 TGAAAACTTGCAGGTGGAGTTC 59.312 45.455 0.65 5.26 32.79 3.01
369 3407 2.689983 CTGAAAACTTGCAGGTGGAGTT 59.310 45.455 0.65 0.00 35.27 3.01
370 3408 2.092429 TCTGAAAACTTGCAGGTGGAGT 60.092 45.455 0.65 0.00 33.05 3.85
374 3412 4.935702 TCATTTCTGAAAACTTGCAGGTG 58.064 39.130 0.65 0.00 33.05 4.00
402 4856 7.553044 ACAAAGTAGGAAATAACCTGCATACTC 59.447 37.037 0.00 0.00 43.39 2.59
454 4912 1.473278 CAAGTCCTAGAGTCCACGTCC 59.527 57.143 0.00 0.00 0.00 4.79
529 5000 2.496470 ACGAGAGTCCATTGTTAGGGTC 59.504 50.000 0.00 0.00 44.19 4.46
554 5027 8.609176 GTTAATTATTAAGCTGTCGATTCCACA 58.391 33.333 0.00 0.00 0.00 4.17
587 5060 1.719780 CGACGTGAACTTTGGAGTAGC 59.280 52.381 0.00 0.00 34.21 3.58
652 5159 3.889196 TTCCTTGCACACGTTTACATC 57.111 42.857 0.00 0.00 0.00 3.06
683 5190 6.020678 GGATCGTCAGTGAAAACAAACAAAAG 60.021 38.462 0.00 0.00 0.00 2.27
689 5196 4.495019 CGTTGGATCGTCAGTGAAAACAAA 60.495 41.667 0.00 0.00 0.00 2.83
698 5205 1.067974 TGAACACGTTGGATCGTCAGT 59.932 47.619 0.00 0.00 42.27 3.41
708 5215 6.020678 GGAGAGAAACAAAAATGAACACGTTG 60.021 38.462 0.00 0.00 0.00 4.10
775 5284 5.158494 CACCTTTAATAAGCACGTTTTCCC 58.842 41.667 0.00 0.00 0.00 3.97
864 8910 1.405105 CTTGATTGGTTACATGGGGCG 59.595 52.381 0.00 0.00 0.00 6.13
873 8919 0.326595 TGGCGAGGCTTGATTGGTTA 59.673 50.000 5.76 0.00 0.00 2.85
943 8997 1.671379 GACTTTGACCTGCGGGGAC 60.671 63.158 18.00 10.29 38.76 4.46
1123 9179 0.042431 AGCAGGACACAGAGGAGGAT 59.958 55.000 0.00 0.00 0.00 3.24
1132 9191 2.942796 CGGCCAGTAGCAGGACACA 61.943 63.158 2.24 0.00 46.50 3.72
1199 9258 4.764336 TCGAGTTGTACGCGCGGG 62.764 66.667 35.22 22.69 41.15 6.13
1201 9260 3.887327 GCTCGAGTTGTACGCGCG 61.887 66.667 30.96 30.96 41.15 6.86
1204 9263 0.366871 CACATGCTCGAGTTGTACGC 59.633 55.000 18.62 3.56 0.00 4.42
1205 9264 0.366871 GCACATGCTCGAGTTGTACG 59.633 55.000 18.62 11.25 38.21 3.67
1269 9328 2.297698 TGGACTCGTTGGAGAGGTAA 57.702 50.000 0.00 0.00 43.27 2.85
1311 9370 1.673808 CGGGGTAGCCACAGTAGGAC 61.674 65.000 14.06 0.00 0.00 3.85
1713 9775 4.065281 GGCGCCACGTACACCTCT 62.065 66.667 24.80 0.00 0.00 3.69
1845 9907 3.300667 CTCGCACTTGAAGCACGGC 62.301 63.158 7.46 0.00 0.00 5.68
1988 10050 3.859627 GCTGCTGAAAGTAACCACGACTA 60.860 47.826 0.00 0.00 35.30 2.59
2022 10084 4.271049 CACCAGATAGTACCGAAATGCAAG 59.729 45.833 0.00 0.00 0.00 4.01
2041 10103 1.698506 GGTTGTGTTCCATTCCACCA 58.301 50.000 0.00 0.00 0.00 4.17
2044 10106 0.856982 AGGGGTTGTGTTCCATTCCA 59.143 50.000 0.00 0.00 0.00 3.53
2045 10107 1.545841 GAGGGGTTGTGTTCCATTCC 58.454 55.000 0.00 0.00 0.00 3.01
2046 10108 1.545841 GGAGGGGTTGTGTTCCATTC 58.454 55.000 0.00 0.00 0.00 2.67
2047 10109 0.251165 CGGAGGGGTTGTGTTCCATT 60.251 55.000 0.00 0.00 0.00 3.16
2048 10110 1.378762 CGGAGGGGTTGTGTTCCAT 59.621 57.895 0.00 0.00 0.00 3.41
2160 11358 2.158841 CACCCGACGTTATCCAGTTTTG 59.841 50.000 0.00 0.00 0.00 2.44
2195 11393 4.379243 CGTGGAGGCAGCGGACTT 62.379 66.667 0.00 0.00 26.47 3.01
2237 11435 1.450312 CATGGTGGAGCCGAGGTTC 60.450 63.158 0.00 0.00 41.21 3.62
2256 11454 0.528684 CGGCTCGACCAGAGGAAATC 60.529 60.000 5.15 0.00 46.91 2.17
2279 11477 0.396695 TTATCGTCTTCCTCCCGCCT 60.397 55.000 0.00 0.00 0.00 5.52
2313 11521 4.736896 GGCGGTGTCGGGAGTCAC 62.737 72.222 0.00 0.00 45.94 3.67
2364 11572 3.089874 TCAAGGGAGGATGGCCGG 61.090 66.667 0.00 0.00 39.96 6.13
2370 11578 1.280457 GTGACAGGTCAAGGGAGGAT 58.720 55.000 3.28 0.00 41.85 3.24
2394 11602 1.300971 CCTCTGCAACGGTCATGGTG 61.301 60.000 0.00 0.00 0.00 4.17
2413 11621 2.223665 GCTTAAGACAGGGCATGCATTC 60.224 50.000 21.36 9.36 0.00 2.67
2439 11647 2.618709 GCCAGCAGAGTTTGTAGTGTTT 59.381 45.455 0.00 0.00 0.00 2.83
2476 11684 0.518636 GACGAGCAATGTGTGTGCAT 59.481 50.000 0.00 0.00 44.74 3.96
2496 11704 0.439985 CAACATCGCAACGTGGAGAG 59.560 55.000 2.02 0.00 0.00 3.20
2497 11705 1.565156 GCAACATCGCAACGTGGAGA 61.565 55.000 0.00 0.00 0.00 3.71
2498 11706 1.154413 GCAACATCGCAACGTGGAG 60.154 57.895 0.00 0.00 0.00 3.86
2499 11707 2.942879 GCAACATCGCAACGTGGA 59.057 55.556 0.00 0.00 0.00 4.02
2500 11708 2.499520 CGCAACATCGCAACGTGG 60.500 61.111 0.00 0.00 0.00 4.94
2501 11709 1.788203 GACGCAACATCGCAACGTG 60.788 57.895 0.00 0.00 37.05 4.49
2502 11710 0.665068 TAGACGCAACATCGCAACGT 60.665 50.000 0.00 0.00 40.11 3.99
2503 11711 0.023732 CTAGACGCAACATCGCAACG 59.976 55.000 0.00 0.00 0.00 4.10
2504 11712 0.247301 GCTAGACGCAACATCGCAAC 60.247 55.000 0.00 0.00 38.92 4.17
2505 11713 1.682867 CGCTAGACGCAACATCGCAA 61.683 55.000 0.00 0.00 39.08 4.85
2506 11714 2.158330 CGCTAGACGCAACATCGCA 61.158 57.895 0.00 0.00 39.08 5.10
2507 11715 2.615618 CGCTAGACGCAACATCGC 59.384 61.111 0.00 0.00 39.08 4.58
2579 11787 1.599047 CCGACAAGAGGACCAGCAT 59.401 57.895 0.00 0.00 0.00 3.79
2684 11892 0.742505 TCCACGTCGAACTTGAGTGT 59.257 50.000 0.00 0.00 0.00 3.55
2690 11898 0.600057 GGGTAGTCCACGTCGAACTT 59.400 55.000 0.00 0.00 35.00 2.66
2691 11899 1.246737 GGGGTAGTCCACGTCGAACT 61.247 60.000 0.00 2.11 37.22 3.01
2698 11906 2.267961 GCCAAGGGGTAGTCCACG 59.732 66.667 0.00 0.00 43.05 4.94
2710 11918 1.300971 CCACACCATCGACTGCCAAG 61.301 60.000 0.00 0.00 0.00 3.61
2713 11921 3.127533 GCCACACCATCGACTGCC 61.128 66.667 0.00 0.00 0.00 4.85
2716 11924 4.082523 CGGGCCACACCATCGACT 62.083 66.667 4.39 0.00 42.05 4.18
2770 11978 1.149361 TCAACGAGGTGTTCACGCAC 61.149 55.000 0.00 0.00 39.29 5.34
2786 11997 3.181490 CCGGAGTTCATGTAGATCGTCAA 60.181 47.826 0.00 0.00 0.00 3.18
2836 12047 1.302192 GAGCACCTGGTTGCCGTAA 60.302 57.895 14.77 0.00 44.14 3.18
2871 12082 1.227380 GCTGACTCGTGGGCTATGG 60.227 63.158 0.00 0.00 0.00 2.74
2873 12084 1.381872 AGGCTGACTCGTGGGCTAT 60.382 57.895 0.00 0.00 34.14 2.97
2875 12086 3.699894 CAGGCTGACTCGTGGGCT 61.700 66.667 9.42 0.00 36.29 5.19
2890 12101 3.195002 CGGTACACATGCGGGCAG 61.195 66.667 0.00 0.00 0.00 4.85
2899 12110 2.280524 GTGGTGCTGCGGTACACA 60.281 61.111 16.02 8.29 38.57 3.72
2901 12112 2.796483 GATGGTGGTGCTGCGGTACA 62.796 60.000 16.02 0.00 0.00 2.90
2902 12113 2.046314 ATGGTGGTGCTGCGGTAC 60.046 61.111 5.00 5.00 0.00 3.34
2937 12148 2.117156 CGATCCCGGTCCGTGTACT 61.117 63.158 11.06 0.00 0.00 2.73
2953 12164 1.592400 CGTAGGCTGTCAGGAACCGA 61.592 60.000 1.14 0.00 0.00 4.69
2999 12210 1.733041 CGTCGTACACCAGTGGCAG 60.733 63.158 9.78 4.69 34.19 4.85
3004 12215 1.288127 GAAGGCGTCGTACACCAGT 59.712 57.895 0.00 0.00 0.00 4.00
3058 12269 2.661866 GCGGACGTGCTGTTGTCT 60.662 61.111 5.27 0.00 35.45 3.41
3196 12407 1.141881 CCACCTCACCGAGAATCCG 59.858 63.158 0.00 0.00 0.00 4.18
3199 12410 0.905357 CCTTCCACCTCACCGAGAAT 59.095 55.000 0.00 0.00 0.00 2.40
3363 12580 1.593196 ACATCGTTGACCAACCAGTG 58.407 50.000 7.24 6.36 38.03 3.66
3367 12597 1.504359 TCGAACATCGTTGACCAACC 58.496 50.000 7.24 0.00 41.35 3.77
3403 12633 1.672356 CCCTGAGTTTGGCTGACCG 60.672 63.158 0.00 0.00 39.70 4.79
3415 12648 2.584835 TCCAAAACCATGTCCCTGAG 57.415 50.000 0.00 0.00 0.00 3.35
3432 12665 5.220777 CGTAAACCAATACCACATGTGATCC 60.221 44.000 27.46 0.98 0.00 3.36
3470 12703 4.472833 AGGACATCTCAAGGTTGCTTAGAT 59.527 41.667 0.00 0.00 0.00 1.98
3513 12747 0.107456 CAGCTGACCAGTGACCAGTT 59.893 55.000 8.42 4.95 0.00 3.16
3524 12758 2.724520 CCATTATGGGCAGCTGACC 58.275 57.895 33.16 33.16 45.93 4.02
3639 12873 8.965819 TGTGTTATGCATGTCAATTAATAAGGT 58.034 29.630 10.16 0.00 0.00 3.50
3640 12874 9.800433 TTGTGTTATGCATGTCAATTAATAAGG 57.200 29.630 10.16 0.00 0.00 2.69
3648 12882 9.787532 GTACTATTTTGTGTTATGCATGTCAAT 57.212 29.630 10.16 1.96 0.00 2.57
3649 12883 8.787852 TGTACTATTTTGTGTTATGCATGTCAA 58.212 29.630 10.16 6.53 0.00 3.18
3650 12884 8.329203 TGTACTATTTTGTGTTATGCATGTCA 57.671 30.769 10.16 5.48 0.00 3.58
3651 12885 9.061610 GTTGTACTATTTTGTGTTATGCATGTC 57.938 33.333 10.16 2.63 0.00 3.06
3652 12886 8.572185 TGTTGTACTATTTTGTGTTATGCATGT 58.428 29.630 10.16 0.00 0.00 3.21
3653 12887 8.962857 TGTTGTACTATTTTGTGTTATGCATG 57.037 30.769 10.16 0.00 0.00 4.06
3655 12889 9.973450 AAATGTTGTACTATTTTGTGTTATGCA 57.027 25.926 0.00 0.00 0.00 3.96
3673 12907 9.866655 AGGATGTGGTATCATATTAAATGTTGT 57.133 29.630 0.00 0.00 0.00 3.32
3676 12910 9.950496 GAGAGGATGTGGTATCATATTAAATGT 57.050 33.333 0.00 0.00 0.00 2.71
3735 12969 9.520204 GCAGTATTATGCATGACATTTAAACTT 57.480 29.630 10.16 0.00 45.77 2.66
3750 12984 9.823647 ATGGTAGTATCATAAGCAGTATTATGC 57.176 33.333 0.00 0.00 46.88 3.14
3754 12988 9.856488 CGTAATGGTAGTATCATAAGCAGTATT 57.144 33.333 0.00 0.00 0.00 1.89
3755 12989 9.239551 TCGTAATGGTAGTATCATAAGCAGTAT 57.760 33.333 0.00 0.00 0.00 2.12
3756 12990 8.509690 GTCGTAATGGTAGTATCATAAGCAGTA 58.490 37.037 0.00 0.00 0.00 2.74
3757 12991 7.368833 GTCGTAATGGTAGTATCATAAGCAGT 58.631 38.462 0.00 0.00 0.00 4.40
3758 12992 6.807230 GGTCGTAATGGTAGTATCATAAGCAG 59.193 42.308 0.00 0.00 0.00 4.24
3759 12993 6.265876 TGGTCGTAATGGTAGTATCATAAGCA 59.734 38.462 0.00 0.00 0.00 3.91
3760 12994 6.684686 TGGTCGTAATGGTAGTATCATAAGC 58.315 40.000 0.00 0.00 0.00 3.09
3761 12995 7.883217 ACTGGTCGTAATGGTAGTATCATAAG 58.117 38.462 0.00 0.00 0.00 1.73
3762 12996 7.722728 AGACTGGTCGTAATGGTAGTATCATAA 59.277 37.037 0.00 0.00 34.09 1.90
3763 12997 7.174426 CAGACTGGTCGTAATGGTAGTATCATA 59.826 40.741 0.00 0.00 34.09 2.15
3764 12998 6.016192 CAGACTGGTCGTAATGGTAGTATCAT 60.016 42.308 0.00 0.00 34.09 2.45
3765 12999 5.298527 CAGACTGGTCGTAATGGTAGTATCA 59.701 44.000 0.00 0.00 34.09 2.15
3766 13000 5.278364 CCAGACTGGTCGTAATGGTAGTATC 60.278 48.000 13.84 0.00 31.35 2.24
3767 13001 4.583489 CCAGACTGGTCGTAATGGTAGTAT 59.417 45.833 13.84 0.00 31.35 2.12
3768 13002 3.949754 CCAGACTGGTCGTAATGGTAGTA 59.050 47.826 13.84 0.00 31.35 1.82
3769 13003 2.758979 CCAGACTGGTCGTAATGGTAGT 59.241 50.000 13.84 0.00 31.35 2.73
3770 13004 3.021695 TCCAGACTGGTCGTAATGGTAG 58.978 50.000 21.06 0.00 39.03 3.18
3771 13005 3.090210 TCCAGACTGGTCGTAATGGTA 57.910 47.619 21.06 0.00 39.03 3.25
3772 13006 1.933021 TCCAGACTGGTCGTAATGGT 58.067 50.000 21.06 0.00 39.03 3.55
3773 13007 2.496070 TCTTCCAGACTGGTCGTAATGG 59.504 50.000 21.06 4.42 39.03 3.16
3774 13008 3.512680 GTCTTCCAGACTGGTCGTAATG 58.487 50.000 21.06 4.27 41.88 1.90
3775 13009 3.870633 GTCTTCCAGACTGGTCGTAAT 57.129 47.619 21.06 0.00 41.88 1.89
3822 13064 7.492669 AGTCAAAGATTCACACATACTTATCGG 59.507 37.037 0.00 0.00 0.00 4.18
3853 13095 5.759059 TCCTACCTACTTCGTCCTGATTTA 58.241 41.667 0.00 0.00 0.00 1.40
3917 13162 2.912295 TGTGGAGGATTTCAGGACATGA 59.088 45.455 0.00 0.00 35.62 3.07
3983 13228 5.046878 TCAGACACGGCTTAGATTTAAAGGA 60.047 40.000 0.00 0.00 0.00 3.36
3984 13229 5.063564 GTCAGACACGGCTTAGATTTAAAGG 59.936 44.000 0.00 0.00 0.00 3.11
4034 13560 6.216456 AGGAAATGTATCAAGGAAGAAGGAGT 59.784 38.462 0.00 0.00 0.00 3.85
4223 13751 2.823196 TGCAAATGCCGATTAGAACG 57.177 45.000 2.46 0.00 41.18 3.95
4305 13833 0.242825 TCTTGCGGACGTACAGGAAG 59.757 55.000 14.49 14.49 41.55 3.46
4315 13843 1.605058 TACTGCCTCCTCTTGCGGAC 61.605 60.000 0.00 0.00 37.31 4.79
4347 13875 1.254284 ACTTGAGGAGCCTGGACGAG 61.254 60.000 0.00 0.00 0.00 4.18
4824 14472 2.365635 ATGGCGTGGAGGTAGGCT 60.366 61.111 0.00 0.00 0.00 4.58
5316 15075 2.911143 CCGCCCTCTTGTATGCCT 59.089 61.111 0.00 0.00 0.00 4.75
5375 15137 2.017049 GAGATCAATTCCAACACGGGG 58.983 52.381 0.00 0.00 34.36 5.73
5376 15138 2.679837 CTGAGATCAATTCCAACACGGG 59.320 50.000 0.00 0.00 34.36 5.28
5377 15139 2.679837 CCTGAGATCAATTCCAACACGG 59.320 50.000 0.00 0.00 0.00 4.94
5378 15140 3.338249 ACCTGAGATCAATTCCAACACG 58.662 45.455 0.00 0.00 0.00 4.49
5485 15492 1.000019 AACAGGGAGATCGTCGGGA 60.000 57.895 0.00 0.00 0.00 5.14
5511 15518 1.371183 CTTGCGGTCTCCACTCCAA 59.629 57.895 0.00 0.00 0.00 3.53
5597 15604 7.560626 ACCTAAACGATTAACAGAGAGGAGTAT 59.439 37.037 0.00 0.00 0.00 2.12
5637 15644 6.766467 GGGATAAACGTGACAGGATCTTAATT 59.234 38.462 1.39 0.00 0.00 1.40
5724 15731 1.822250 GCTACACGCTAATGCTCGGC 61.822 60.000 0.00 0.00 36.97 5.54
5737 15744 3.597162 CGTCCATACGCGCTACAC 58.403 61.111 5.73 0.00 43.12 2.90
5746 15753 5.584649 TGACATTTTGAAGATCCGTCCATAC 59.415 40.000 0.00 0.00 0.00 2.39
5747 15754 5.584649 GTGACATTTTGAAGATCCGTCCATA 59.415 40.000 0.00 0.00 0.00 2.74
5752 15772 4.003648 GAGGTGACATTTTGAAGATCCGT 58.996 43.478 0.00 0.00 0.00 4.69
5757 15777 2.716424 AGGGGAGGTGACATTTTGAAGA 59.284 45.455 0.00 0.00 0.00 2.87
5854 15874 5.445806 GGACAAATGCAAACTGAAACAACAC 60.446 40.000 0.00 0.00 0.00 3.32
5863 15883 5.913137 TTATAGGGGACAAATGCAAACTG 57.087 39.130 0.00 0.00 0.00 3.16
5906 15926 0.037326 TCAGACGGTTCAGGTGATGC 60.037 55.000 0.00 0.00 0.00 3.91
5944 15965 7.602517 TGGTGTTTAACATTGAAAGGTTTTG 57.397 32.000 0.00 0.00 34.45 2.44
5945 15966 7.148557 CGTTGGTGTTTAACATTGAAAGGTTTT 60.149 33.333 0.00 0.00 34.45 2.43
5994 16026 5.990120 TTCTACTAGTTAGTGTTGGACCC 57.010 43.478 0.00 0.00 37.10 4.46
5996 16028 5.811100 GGCATTCTACTAGTTAGTGTTGGAC 59.189 44.000 0.00 0.00 37.10 4.02
6031 16063 1.219522 AACGAGTTCGAAAGCCCGTG 61.220 55.000 8.72 0.00 43.02 4.94
6037 16069 4.271687 CAACCAGAAAACGAGTTCGAAAG 58.728 43.478 8.72 0.00 43.02 2.62
6041 16073 1.329292 TGCAACCAGAAAACGAGTTCG 59.671 47.619 0.00 0.00 46.33 3.95
6097 16129 4.187694 AGAGACGCTCAAAAAGATCCATC 58.812 43.478 9.09 0.00 32.06 3.51
6100 16132 3.855858 AGAGAGACGCTCAAAAAGATCC 58.144 45.455 9.00 0.00 46.45 3.36
6224 16300 0.163788 CAGGCGCTGTCAAAACTACG 59.836 55.000 7.64 0.00 0.00 3.51
6259 16335 2.676121 CCCAATGTTGCCGGCTCA 60.676 61.111 29.70 25.45 0.00 4.26
6271 16347 1.682005 CCCGTGGAACATGCCCAAT 60.682 57.895 8.79 0.00 45.46 3.16
6272 16348 2.282816 CCCGTGGAACATGCCCAA 60.283 61.111 8.79 0.00 45.46 4.12
6284 16360 3.142951 TCTGGTACAAATTGTTCCCGTG 58.857 45.455 17.23 9.00 37.05 4.94
6287 16363 4.261867 GGTGTTCTGGTACAAATTGTTCCC 60.262 45.833 17.23 12.11 37.05 3.97
6288 16364 4.261867 GGGTGTTCTGGTACAAATTGTTCC 60.262 45.833 13.86 13.86 38.70 3.62
6303 16379 0.832135 TGCCTCTCGAAGGGTGTTCT 60.832 55.000 13.33 0.00 46.32 3.01
6308 16384 1.371558 GTTGTGCCTCTCGAAGGGT 59.628 57.895 13.33 0.00 46.32 4.34
6311 16387 0.249868 TGGTGTTGTGCCTCTCGAAG 60.250 55.000 0.00 0.00 0.00 3.79
6313 16389 1.069090 GTGGTGTTGTGCCTCTCGA 59.931 57.895 0.00 0.00 0.00 4.04
6314 16390 1.224069 CTGTGGTGTTGTGCCTCTCG 61.224 60.000 0.00 0.00 0.00 4.04
6327 16427 2.201436 CTAGTGTCGCGAGCTGTGGT 62.201 60.000 10.24 0.00 0.00 4.16
6330 16430 2.179517 GCTAGTGTCGCGAGCTGT 59.820 61.111 10.24 0.00 41.70 4.40
6338 16438 3.057456 AGTTGGTGTTCTAGCTAGTGTCG 60.057 47.826 20.10 0.00 0.00 4.35
6340 16440 3.641906 ACAGTTGGTGTTCTAGCTAGTGT 59.358 43.478 20.10 10.77 39.95 3.55
6362 16462 0.998669 CATGCAACATCGTGTCGCTA 59.001 50.000 0.00 0.00 0.00 4.26
6375 16475 0.107066 ATCGCCTCCATGTCATGCAA 60.107 50.000 7.35 0.00 0.00 4.08
6380 16480 2.202919 CGCATCGCCTCCATGTCA 60.203 61.111 0.00 0.00 0.00 3.58
6399 16499 2.286523 AAGCTCAGTGTAGGGCGCT 61.287 57.895 7.64 8.86 38.72 5.92
6400 16500 2.103042 CAAGCTCAGTGTAGGGCGC 61.103 63.158 0.00 0.00 0.00 6.53
6401 16501 0.737715 GTCAAGCTCAGTGTAGGGCG 60.738 60.000 0.00 0.00 0.00 6.13
6404 16504 1.670087 CGTGGTCAAGCTCAGTGTAGG 60.670 57.143 0.00 0.00 0.00 3.18
6405 16505 1.670087 CCGTGGTCAAGCTCAGTGTAG 60.670 57.143 0.00 0.00 0.00 2.74
6407 16507 1.069765 CCGTGGTCAAGCTCAGTGT 59.930 57.895 0.00 0.00 0.00 3.55
6416 16528 1.066430 GGTTCTATCTGCCGTGGTCAA 60.066 52.381 0.00 0.00 0.00 3.18
6430 16542 1.220749 GGGCAGCGTCATGGTTCTA 59.779 57.895 0.00 0.00 0.00 2.10
6440 16552 2.819595 CAAGCGTATGGGCAGCGT 60.820 61.111 0.00 0.00 35.78 5.07
6443 16555 0.108186 TCACTCAAGCGTATGGGCAG 60.108 55.000 0.00 0.00 34.64 4.85
6453 16565 0.251354 TGCCTGATCCTCACTCAAGC 59.749 55.000 0.00 0.00 31.99 4.01
6456 16568 2.171568 AGATGCCTGATCCTCACTCA 57.828 50.000 0.00 0.00 0.00 3.41
6460 16572 9.730705 CTTTAATTATTAGATGCCTGATCCTCA 57.269 33.333 0.00 0.00 0.00 3.86
6465 16577 9.646522 AACCACTTTAATTATTAGATGCCTGAT 57.353 29.630 2.99 0.00 0.00 2.90
6478 16590 8.990163 AGTCCTTTGAAGAACCACTTTAATTA 57.010 30.769 0.00 0.00 39.13 1.40
6479 16591 7.898014 AGTCCTTTGAAGAACCACTTTAATT 57.102 32.000 0.00 0.00 39.13 1.40
6480 16592 7.898014 AAGTCCTTTGAAGAACCACTTTAAT 57.102 32.000 0.00 0.00 39.13 1.40
6481 16593 8.680001 GTTAAGTCCTTTGAAGAACCACTTTAA 58.320 33.333 0.00 0.00 39.13 1.52
6502 16614 9.030301 CATTTACAAAACTCTGTTTGGGTTAAG 57.970 33.333 3.02 0.00 41.82 1.85
6527 16639 6.126409 ACTTAGTTTGGATCAAGAAACCACA 58.874 36.000 9.44 0.00 33.34 4.17
6617 16729 9.959721 ACCTAGCAACTTTTCATAGATTTAGAA 57.040 29.630 0.00 0.00 0.00 2.10
6620 16732 9.609346 GGTACCTAGCAACTTTTCATAGATTTA 57.391 33.333 4.06 0.00 0.00 1.40
6621 16733 7.280205 CGGTACCTAGCAACTTTTCATAGATTT 59.720 37.037 10.90 0.00 0.00 2.17
6622 16734 6.761714 CGGTACCTAGCAACTTTTCATAGATT 59.238 38.462 10.90 0.00 0.00 2.40
6623 16735 6.281405 CGGTACCTAGCAACTTTTCATAGAT 58.719 40.000 10.90 0.00 0.00 1.98
6624 16736 5.657474 CGGTACCTAGCAACTTTTCATAGA 58.343 41.667 10.90 0.00 0.00 1.98
6625 16737 4.270325 GCGGTACCTAGCAACTTTTCATAG 59.730 45.833 10.90 0.00 0.00 2.23
6626 16738 4.186159 GCGGTACCTAGCAACTTTTCATA 58.814 43.478 10.90 0.00 0.00 2.15
6627 16739 3.007635 GCGGTACCTAGCAACTTTTCAT 58.992 45.455 10.90 0.00 0.00 2.57
6628 16740 2.224329 TGCGGTACCTAGCAACTTTTCA 60.224 45.455 11.58 0.00 40.78 2.69
6629 16741 2.419667 TGCGGTACCTAGCAACTTTTC 58.580 47.619 11.58 0.00 40.78 2.29
6630 16742 2.554370 TGCGGTACCTAGCAACTTTT 57.446 45.000 11.58 0.00 40.78 2.27
6637 16749 7.042335 AGATTAATTATGATGCGGTACCTAGC 58.958 38.462 10.90 7.63 0.00 3.42
6639 16751 9.865321 GTTAGATTAATTATGATGCGGTACCTA 57.135 33.333 10.90 0.00 0.00 3.08
6640 16752 8.594550 AGTTAGATTAATTATGATGCGGTACCT 58.405 33.333 10.90 0.00 0.00 3.08
6641 16753 8.773404 AGTTAGATTAATTATGATGCGGTACC 57.227 34.615 0.16 0.16 0.00 3.34
6685 16797 6.453092 AGTACTACGACACACTAGCATTTTT 58.547 36.000 0.00 0.00 0.00 1.94
6686 16798 6.022163 AGTACTACGACACACTAGCATTTT 57.978 37.500 0.00 0.00 0.00 1.82
6687 16799 5.640189 AGTACTACGACACACTAGCATTT 57.360 39.130 0.00 0.00 0.00 2.32
6688 16800 5.640189 AAGTACTACGACACACTAGCATT 57.360 39.130 0.00 0.00 0.00 3.56
6689 16801 5.645067 TGTAAGTACTACGACACACTAGCAT 59.355 40.000 0.00 0.00 32.65 3.79
6690 16802 4.996758 TGTAAGTACTACGACACACTAGCA 59.003 41.667 0.00 0.00 32.65 3.49
6691 16803 5.536554 TGTAAGTACTACGACACACTAGC 57.463 43.478 0.00 0.00 32.65 3.42
6692 16804 6.891624 TGTTGTAAGTACTACGACACACTAG 58.108 40.000 15.75 0.00 46.01 2.57
6693 16805 6.859420 TGTTGTAAGTACTACGACACACTA 57.141 37.500 15.75 0.00 46.01 2.74
6694 16806 5.756195 TGTTGTAAGTACTACGACACACT 57.244 39.130 15.75 0.00 46.01 3.55
6699 16811 9.219497 GTGAGATAATGTTGTAAGTACTACGAC 57.781 37.037 0.00 5.94 43.05 4.34
6700 16812 8.949177 TGTGAGATAATGTTGTAAGTACTACGA 58.051 33.333 0.00 0.00 35.24 3.43
6701 16813 9.563898 TTGTGAGATAATGTTGTAAGTACTACG 57.436 33.333 0.00 0.00 35.24 3.51
6704 16816 9.424319 CAGTTGTGAGATAATGTTGTAAGTACT 57.576 33.333 0.00 0.00 0.00 2.73
6705 16817 9.419297 TCAGTTGTGAGATAATGTTGTAAGTAC 57.581 33.333 0.00 0.00 0.00 2.73
6706 16818 9.990360 TTCAGTTGTGAGATAATGTTGTAAGTA 57.010 29.630 0.00 0.00 32.98 2.24
6707 16819 8.902540 TTCAGTTGTGAGATAATGTTGTAAGT 57.097 30.769 0.00 0.00 32.98 2.24
6708 16820 8.993121 ACTTCAGTTGTGAGATAATGTTGTAAG 58.007 33.333 0.00 0.00 32.98 2.34
6709 16821 8.902540 ACTTCAGTTGTGAGATAATGTTGTAA 57.097 30.769 0.00 0.00 32.98 2.41
6710 16822 9.639601 CTACTTCAGTTGTGAGATAATGTTGTA 57.360 33.333 0.00 0.00 32.98 2.41
6711 16823 7.604164 CCTACTTCAGTTGTGAGATAATGTTGT 59.396 37.037 0.00 0.00 32.98 3.32
6712 16824 7.819415 TCCTACTTCAGTTGTGAGATAATGTTG 59.181 37.037 0.00 0.00 32.98 3.33
6713 16825 7.907389 TCCTACTTCAGTTGTGAGATAATGTT 58.093 34.615 0.00 0.00 32.98 2.71
6714 16826 7.397476 TCTCCTACTTCAGTTGTGAGATAATGT 59.603 37.037 0.00 0.00 32.98 2.71
6715 16827 7.776107 TCTCCTACTTCAGTTGTGAGATAATG 58.224 38.462 0.00 0.00 32.98 1.90
6716 16828 7.836685 TCTCTCCTACTTCAGTTGTGAGATAAT 59.163 37.037 8.73 0.00 32.98 1.28
6717 16829 7.175797 TCTCTCCTACTTCAGTTGTGAGATAA 58.824 38.462 8.73 2.16 32.98 1.75
6718 16830 6.722328 TCTCTCCTACTTCAGTTGTGAGATA 58.278 40.000 8.73 2.82 32.98 1.98
6719 16831 5.575157 TCTCTCCTACTTCAGTTGTGAGAT 58.425 41.667 8.73 0.00 32.98 2.75
6720 16832 4.986783 TCTCTCCTACTTCAGTTGTGAGA 58.013 43.478 0.00 0.00 32.98 3.27
6721 16833 5.713792 TTCTCTCCTACTTCAGTTGTGAG 57.286 43.478 0.00 0.00 32.98 3.51
6722 16834 5.362717 TGTTTCTCTCCTACTTCAGTTGTGA 59.637 40.000 0.00 0.00 0.00 3.58
6723 16835 5.601662 TGTTTCTCTCCTACTTCAGTTGTG 58.398 41.667 0.00 0.00 0.00 3.33
6724 16836 5.598830 TCTGTTTCTCTCCTACTTCAGTTGT 59.401 40.000 0.00 0.00 0.00 3.32
6725 16837 6.090483 TCTGTTTCTCTCCTACTTCAGTTG 57.910 41.667 0.00 0.00 0.00 3.16
6726 16838 6.732896 TTCTGTTTCTCTCCTACTTCAGTT 57.267 37.500 0.00 0.00 0.00 3.16
6727 16839 6.732896 TTTCTGTTTCTCTCCTACTTCAGT 57.267 37.500 0.00 0.00 0.00 3.41
6760 16872 6.259167 CCATTGACCTATGCCAAAATCATTTG 59.741 38.462 0.00 0.00 44.50 2.32
6761 16873 6.070078 ACCATTGACCTATGCCAAAATCATTT 60.070 34.615 0.00 0.00 0.00 2.32
6762 16874 5.426185 ACCATTGACCTATGCCAAAATCATT 59.574 36.000 0.00 0.00 0.00 2.57
6763 16875 4.964262 ACCATTGACCTATGCCAAAATCAT 59.036 37.500 0.00 0.00 0.00 2.45
6764 16876 4.352009 ACCATTGACCTATGCCAAAATCA 58.648 39.130 0.00 0.00 0.00 2.57
6765 16877 6.463995 TTACCATTGACCTATGCCAAAATC 57.536 37.500 0.00 0.00 0.00 2.17
6766 16878 6.127083 CCTTTACCATTGACCTATGCCAAAAT 60.127 38.462 0.00 0.00 0.00 1.82
6767 16879 5.186797 CCTTTACCATTGACCTATGCCAAAA 59.813 40.000 0.00 0.00 0.00 2.44
6768 16880 4.709397 CCTTTACCATTGACCTATGCCAAA 59.291 41.667 0.00 0.00 0.00 3.28
6769 16881 4.277476 CCTTTACCATTGACCTATGCCAA 58.723 43.478 0.00 0.00 0.00 4.52
6770 16882 3.897239 CCTTTACCATTGACCTATGCCA 58.103 45.455 0.00 0.00 0.00 4.92
6771 16883 2.623416 GCCTTTACCATTGACCTATGCC 59.377 50.000 0.00 0.00 0.00 4.40
6772 16884 3.287222 TGCCTTTACCATTGACCTATGC 58.713 45.455 0.00 0.00 0.00 3.14
6773 16885 6.469782 AAATGCCTTTACCATTGACCTATG 57.530 37.500 0.00 0.00 33.48 2.23
6774 16886 6.127083 CCAAAATGCCTTTACCATTGACCTAT 60.127 38.462 0.00 0.00 33.48 2.57
6775 16887 5.186797 CCAAAATGCCTTTACCATTGACCTA 59.813 40.000 0.00 0.00 33.48 3.08
6776 16888 4.020307 CCAAAATGCCTTTACCATTGACCT 60.020 41.667 0.00 0.00 33.48 3.85
6777 16889 4.252878 CCAAAATGCCTTTACCATTGACC 58.747 43.478 0.00 0.00 33.48 4.02
6778 16890 4.893608 ACCAAAATGCCTTTACCATTGAC 58.106 39.130 0.00 0.00 33.48 3.18
6779 16891 6.865834 ATACCAAAATGCCTTTACCATTGA 57.134 33.333 0.00 0.00 33.48 2.57
6780 16892 6.701400 GCTATACCAAAATGCCTTTACCATTG 59.299 38.462 0.00 0.00 33.48 2.82
6781 16893 6.382570 TGCTATACCAAAATGCCTTTACCATT 59.617 34.615 0.00 0.00 34.56 3.16
6782 16894 5.896678 TGCTATACCAAAATGCCTTTACCAT 59.103 36.000 0.00 0.00 0.00 3.55
6783 16895 5.265191 TGCTATACCAAAATGCCTTTACCA 58.735 37.500 0.00 0.00 0.00 3.25
6784 16896 5.845391 TGCTATACCAAAATGCCTTTACC 57.155 39.130 0.00 0.00 0.00 2.85
6785 16897 7.320399 ACTTTGCTATACCAAAATGCCTTTAC 58.680 34.615 0.00 0.00 34.59 2.01
6786 16898 7.475137 ACTTTGCTATACCAAAATGCCTTTA 57.525 32.000 0.00 0.00 34.59 1.85
6787 16899 6.358974 ACTTTGCTATACCAAAATGCCTTT 57.641 33.333 0.00 0.00 34.59 3.11
6788 16900 6.165577 CAACTTTGCTATACCAAAATGCCTT 58.834 36.000 0.00 0.00 34.59 4.35
6789 16901 5.245977 ACAACTTTGCTATACCAAAATGCCT 59.754 36.000 6.14 0.00 34.59 4.75
6790 16902 5.478407 ACAACTTTGCTATACCAAAATGCC 58.522 37.500 6.14 0.00 34.59 4.40
6791 16903 8.702163 ATTACAACTTTGCTATACCAAAATGC 57.298 30.769 6.14 0.00 34.59 3.56
6797 16909 9.727859 TGAAGTTATTACAACTTTGCTATACCA 57.272 29.630 4.06 0.00 40.27 3.25
6842 16954 9.799106 TCCTCTCAAAGATTAGAATTTGAACTT 57.201 29.630 2.43 0.00 42.96 2.66
6843 16955 9.799106 TTCCTCTCAAAGATTAGAATTTGAACT 57.201 29.630 2.43 0.00 42.96 3.01
6851 16963 9.090103 TGTAGTTCTTCCTCTCAAAGATTAGAA 57.910 33.333 0.00 0.00 33.01 2.10
6852 16964 8.651589 TGTAGTTCTTCCTCTCAAAGATTAGA 57.348 34.615 0.00 0.00 33.01 2.10
6853 16965 9.145865 GTTGTAGTTCTTCCTCTCAAAGATTAG 57.854 37.037 0.00 0.00 33.01 1.73
6854 16966 8.871125 AGTTGTAGTTCTTCCTCTCAAAGATTA 58.129 33.333 0.00 0.00 33.01 1.75
6855 16967 7.740805 AGTTGTAGTTCTTCCTCTCAAAGATT 58.259 34.615 0.00 0.00 33.01 2.40
6856 16968 7.309770 AGTTGTAGTTCTTCCTCTCAAAGAT 57.690 36.000 0.00 0.00 33.01 2.40
6857 16969 6.732896 AGTTGTAGTTCTTCCTCTCAAAGA 57.267 37.500 0.00 0.00 0.00 2.52
6858 16970 6.986817 TCAAGTTGTAGTTCTTCCTCTCAAAG 59.013 38.462 2.11 0.00 0.00 2.77
6859 16971 6.884832 TCAAGTTGTAGTTCTTCCTCTCAAA 58.115 36.000 2.11 0.00 0.00 2.69
6860 16972 6.479972 TCAAGTTGTAGTTCTTCCTCTCAA 57.520 37.500 2.11 0.00 0.00 3.02
6861 16973 6.098409 ACTTCAAGTTGTAGTTCTTCCTCTCA 59.902 38.462 9.16 0.00 0.00 3.27
6862 16974 6.517605 ACTTCAAGTTGTAGTTCTTCCTCTC 58.482 40.000 9.16 0.00 0.00 3.20
6863 16975 6.098409 TGACTTCAAGTTGTAGTTCTTCCTCT 59.902 38.462 15.33 0.00 27.84 3.69
6864 16976 6.281405 TGACTTCAAGTTGTAGTTCTTCCTC 58.719 40.000 15.33 3.19 27.84 3.71
6865 16977 6.235231 TGACTTCAAGTTGTAGTTCTTCCT 57.765 37.500 15.33 0.00 27.84 3.36
6866 16978 6.920569 TTGACTTCAAGTTGTAGTTCTTCC 57.079 37.500 15.33 4.42 27.84 3.46
6867 16979 8.831550 AGATTTGACTTCAAGTTGTAGTTCTTC 58.168 33.333 15.33 10.54 37.15 2.87
6868 16980 8.616076 CAGATTTGACTTCAAGTTGTAGTTCTT 58.384 33.333 15.33 3.17 37.15 2.52
6869 16981 7.254932 GCAGATTTGACTTCAAGTTGTAGTTCT 60.255 37.037 15.33 11.34 37.15 3.01
6870 16982 6.853362 GCAGATTTGACTTCAAGTTGTAGTTC 59.147 38.462 15.33 9.51 37.15 3.01
6871 16983 6.318648 TGCAGATTTGACTTCAAGTTGTAGTT 59.681 34.615 15.33 0.99 37.15 2.24
6872 16984 5.822519 TGCAGATTTGACTTCAAGTTGTAGT 59.177 36.000 14.27 14.27 37.15 2.73
6873 16985 6.304356 TGCAGATTTGACTTCAAGTTGTAG 57.696 37.500 7.87 7.87 37.15 2.74
6874 16986 6.318648 AGTTGCAGATTTGACTTCAAGTTGTA 59.681 34.615 2.11 0.00 37.15 2.41
6875 16987 5.126061 AGTTGCAGATTTGACTTCAAGTTGT 59.874 36.000 2.11 0.00 37.15 3.32
6876 16988 5.585390 AGTTGCAGATTTGACTTCAAGTTG 58.415 37.500 0.00 0.00 37.15 3.16
6877 16989 5.841957 AGTTGCAGATTTGACTTCAAGTT 57.158 34.783 0.00 0.00 37.15 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.