Multiple sequence alignment - TraesCS1A01G374100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G374100 chr1A 100.000 3180 0 0 2980 6159 549605967 549609146 0.000000e+00 5873.0
1 TraesCS1A01G374100 chr1A 100.000 2510 0 0 1 2510 549602988 549605497 0.000000e+00 4636.0
2 TraesCS1A01G374100 chr1A 87.653 1061 104 16 1403 2441 549589265 549588210 0.000000e+00 1208.0
3 TraesCS1A01G374100 chr1A 80.330 971 149 24 1563 2508 549621246 549620293 0.000000e+00 697.0
4 TraesCS1A01G374100 chr1A 99.208 379 3 0 1020 1398 549622263 549621885 0.000000e+00 684.0
5 TraesCS1A01G374100 chr1A 82.579 729 79 28 3353 4045 549585033 549584317 3.180000e-167 599.0
6 TraesCS1A01G374100 chr1A 91.494 435 36 1 3225 3659 549619573 549619140 1.140000e-166 597.0
7 TraesCS1A01G374100 chr1A 91.858 393 28 3 3657 4046 549619101 549618710 4.200000e-151 545.0
8 TraesCS1A01G374100 chr1A 83.532 419 25 13 1020 1407 549589820 549589415 9.820000e-93 351.0
9 TraesCS1A01G374100 chr1A 90.837 251 23 0 2980 3230 549619851 549619601 2.750000e-88 337.0
10 TraesCS1A01G374100 chr1A 82.429 387 50 15 1983 2354 549583507 549583124 7.700000e-84 322.0
11 TraesCS1A01G374100 chr1A 94.828 116 5 1 5962 6076 489400819 489400704 4.910000e-41 180.0
12 TraesCS1A01G374100 chr1A 93.333 120 7 1 5970 6089 387511355 387511473 6.350000e-40 176.0
13 TraesCS1A01G374100 chr1A 92.157 102 8 0 3115 3216 549605967 549606068 1.790000e-30 145.0
14 TraesCS1A01G374100 chr1A 92.157 102 8 0 2980 3081 549606102 549606203 1.790000e-30 145.0
15 TraesCS1A01G374100 chr1A 81.132 159 17 12 2294 2445 505284694 505284542 1.400000e-21 115.0
16 TraesCS1A01G374100 chr1A 86.364 88 12 0 3331 3418 549605982 549606069 5.080000e-16 97.1
17 TraesCS1A01G374100 chr1D 94.586 1847 89 6 3225 5070 456062620 456064456 0.000000e+00 2846.0
18 TraesCS1A01G374100 chr1D 96.754 1109 31 3 1403 2507 456060787 456061894 0.000000e+00 1844.0
19 TraesCS1A01G374100 chr1D 83.019 1113 132 29 1400 2484 456034502 456033419 0.000000e+00 955.0
20 TraesCS1A01G374100 chr1D 86.667 615 56 12 408 1007 456059445 456060048 0.000000e+00 658.0
21 TraesCS1A01G374100 chr1D 91.437 327 20 6 5109 5431 456064452 456064774 5.670000e-120 442.0
22 TraesCS1A01G374100 chr1D 87.500 400 17 3 1020 1398 456035030 456034643 1.230000e-116 431.0
23 TraesCS1A01G374100 chr1D 86.893 412 18 9 1020 1407 456060234 456060633 4.410000e-116 429.0
24 TraesCS1A01G374100 chr1D 91.968 249 15 3 2980 3227 456062462 456062706 1.640000e-90 344.0
25 TraesCS1A01G374100 chr1D 92.405 237 18 0 2980 3216 456062327 456062563 7.650000e-89 339.0
26 TraesCS1A01G374100 chr1D 91.284 218 18 1 3225 3441 456032819 456032602 4.670000e-76 296.0
27 TraesCS1A01G374100 chr1D 85.052 194 29 0 3225 3418 456032936 456032743 1.350000e-46 198.0
28 TraesCS1A01G374100 chr1D 82.083 240 25 5 2980 3219 456032962 456032741 8.150000e-44 189.0
29 TraesCS1A01G374100 chr1D 92.000 125 9 1 5963 6086 443424619 443424743 2.280000e-39 174.0
30 TraesCS1A01G374100 chr1D 85.207 169 24 1 2276 2444 456032145 456031978 8.210000e-39 172.0
31 TraesCS1A01G374100 chr1D 87.500 136 17 0 3081 3216 456062293 456062428 2.300000e-34 158.0
32 TraesCS1A01G374100 chr1D 79.325 237 31 5 2980 3216 456062594 456062812 3.850000e-32 150.0
33 TraesCS1A01G374100 chr1D 88.034 117 14 0 2994 3110 456032831 456032715 8.320000e-29 139.0
34 TraesCS1A01G374100 chr1D 78.829 222 33 14 2294 2508 409069217 409069003 2.990000e-28 137.0
35 TraesCS1A01G374100 chr1D 88.571 70 8 0 298 367 456059397 456059466 1.100000e-12 86.1
36 TraesCS1A01G374100 chr1D 100.000 28 0 0 145 172 451047680 451047707 1.100000e-02 52.8
37 TraesCS1A01G374100 chr1B 91.615 1598 94 13 3225 4805 626513226 626514800 0.000000e+00 2172.0
38 TraesCS1A01G374100 chr1B 92.681 1134 48 4 1403 2510 626511260 626512384 0.000000e+00 1602.0
39 TraesCS1A01G374100 chr1B 89.139 1022 79 22 1 1007 626509513 626510517 0.000000e+00 1243.0
40 TraesCS1A01G374100 chr1B 82.147 857 98 27 3225 4045 626497978 626497141 0.000000e+00 684.0
41 TraesCS1A01G374100 chr1B 89.890 455 26 9 5482 5916 626515050 626515504 8.960000e-158 568.0
42 TraesCS1A01G374100 chr1B 95.977 348 14 0 1441 1788 626499773 626499426 3.220000e-157 566.0
43 TraesCS1A01G374100 chr1B 88.725 408 15 5 1020 1398 626500421 626500016 2.600000e-128 470.0
44 TraesCS1A01G374100 chr1B 88.148 405 24 2 1023 1406 626510707 626511108 1.560000e-125 460.0
45 TraesCS1A01G374100 chr1B 92.339 248 19 0 2980 3227 626512948 626513195 2.730000e-93 353.0
46 TraesCS1A01G374100 chr1B 92.827 237 17 0 2980 3216 626512813 626513049 1.640000e-90 344.0
47 TraesCS1A01G374100 chr1B 91.441 222 12 4 5159 5379 626514808 626515023 1.300000e-76 298.0
48 TraesCS1A01G374100 chr1B 87.500 136 17 0 3081 3216 626512779 626512914 2.300000e-34 158.0
49 TraesCS1A01G374100 chr1B 81.863 204 19 7 2980 3183 626513083 626513268 8.270000e-34 156.0
50 TraesCS1A01G374100 chr1B 79.186 221 29 15 2294 2508 551034194 551033985 2.990000e-28 137.0
51 TraesCS1A01G374100 chr1B 94.444 54 1 1 5427 5480 135912173 135912122 1.420000e-11 82.4
52 TraesCS1A01G374100 chr3B 83.082 331 53 3 3331 3659 43046092 43045763 1.300000e-76 298.0
53 TraesCS1A01G374100 chr6B 94.118 119 6 1 5970 6088 591265596 591265479 4.910000e-41 180.0
54 TraesCS1A01G374100 chr6B 97.826 46 1 0 5423 5468 135131127 135131172 5.120000e-11 80.5
55 TraesCS1A01G374100 chr7D 94.737 114 6 0 5966 6079 227507117 227507230 1.760000e-40 178.0
56 TraesCS1A01G374100 chr7D 94.017 117 7 0 5970 6086 555213441 555213325 1.760000e-40 178.0
57 TraesCS1A01G374100 chr7D 98.039 51 1 0 5418 5468 613325676 613325626 8.500000e-14 89.8
58 TraesCS1A01G374100 chr7D 97.872 47 1 0 5422 5468 479724764 479724718 1.420000e-11 82.4
59 TraesCS1A01G374100 chr7B 92.683 123 8 1 5970 6092 523682081 523681960 6.350000e-40 176.0
60 TraesCS1A01G374100 chr7B 77.707 157 25 6 809 964 415525583 415525730 3.060000e-13 87.9
61 TraesCS1A01G374100 chr5B 92.126 127 7 3 5954 6079 566504184 566504308 6.350000e-40 176.0
62 TraesCS1A01G374100 chr5B 77.914 163 21 10 820 979 96754690 96754840 3.060000e-13 87.9
63 TraesCS1A01G374100 chr6D 91.935 124 9 1 5963 6086 126448679 126448557 8.210000e-39 172.0
64 TraesCS1A01G374100 chrUn 74.929 351 50 18 1079 1399 334868835 334869177 6.480000e-25 126.0
65 TraesCS1A01G374100 chr2B 77.717 184 25 13 807 985 718353018 718352846 1.410000e-16 99.0
66 TraesCS1A01G374100 chr4B 85.106 94 8 5 824 913 248571523 248571432 2.360000e-14 91.6
67 TraesCS1A01G374100 chr4B 77.576 165 19 12 824 982 588066927 588067079 3.960000e-12 84.2
68 TraesCS1A01G374100 chr5D 77.987 159 24 7 824 981 482597209 482597061 8.500000e-14 89.8
69 TraesCS1A01G374100 chr2D 81.651 109 14 4 806 910 219278942 219279048 1.100000e-12 86.1
70 TraesCS1A01G374100 chr2D 84.810 79 10 2 1120 1197 5085916 5085839 1.840000e-10 78.7
71 TraesCS1A01G374100 chr2D 94.231 52 2 1 5422 5473 87598719 87598669 1.840000e-10 78.7
72 TraesCS1A01G374100 chr2A 97.959 49 1 0 5421 5469 166627630 166627582 1.100000e-12 86.1
73 TraesCS1A01G374100 chr2A 84.810 79 10 2 1120 1197 3102637 3102714 1.840000e-10 78.7
74 TraesCS1A01G374100 chr4D 97.872 47 1 0 5427 5473 329021263 329021309 1.420000e-11 82.4
75 TraesCS1A01G374100 chr7A 97.826 46 1 0 5423 5468 423539909 423539954 5.120000e-11 80.5
76 TraesCS1A01G374100 chr7A 100.000 31 0 0 119 149 102483136 102483166 2.400000e-04 58.4
77 TraesCS1A01G374100 chr3A 92.727 55 4 0 5417 5471 570498962 570498908 5.120000e-11 80.5
78 TraesCS1A01G374100 chr3D 75.581 172 31 7 809 979 472315289 472315450 2.380000e-09 75.0
79 TraesCS1A01G374100 chr5A 80.000 105 11 8 877 979 370602062 370601966 1.110000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G374100 chr1A 549602988 549609146 6158 False 2179.220000 5873 94.135600 1 6159 5 chr1A.!!$F2 6158
1 TraesCS1A01G374100 chr1A 549583124 549589820 6696 True 620.000000 1208 84.048250 1020 4045 4 chr1A.!!$R3 3025
2 TraesCS1A01G374100 chr1A 549618710 549622263 3553 True 572.000000 697 90.745400 1020 4046 5 chr1A.!!$R4 3026
3 TraesCS1A01G374100 chr1D 456059397 456064774 5377 False 729.610000 2846 89.610600 298 5431 10 chr1D.!!$F3 5133
4 TraesCS1A01G374100 chr1D 456031978 456035030 3052 True 340.000000 955 86.025571 1020 3441 7 chr1D.!!$R2 2421
5 TraesCS1A01G374100 chr1B 626509513 626515504 5991 False 735.400000 2172 89.744300 1 5916 10 chr1B.!!$F1 5915
6 TraesCS1A01G374100 chr1B 626497141 626500421 3280 True 573.333333 684 88.949667 1020 4045 3 chr1B.!!$R3 3025

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
477 479 0.935898 CATGCTCTGCGGAATCAGTC 59.064 55.000 0.00 0.00 35.63 3.51 F
1008 1029 0.538118 TATCGGGGCGCAAAAGTAGT 59.462 50.000 10.83 0.00 0.00 2.73 F
1009 1030 1.024579 ATCGGGGCGCAAAAGTAGTG 61.025 55.000 10.83 0.00 0.00 2.74 F
2093 3028 1.286260 GCCGGCTCATACTAGACCG 59.714 63.158 22.15 0.00 43.44 4.79 F
3082 6870 1.642037 GCAGATTGCGAGCAGAAGCA 61.642 55.000 0.00 0.00 42.15 3.91 F
3097 6885 0.259938 AAGCAGGGCCCCTAAAGATG 59.740 55.000 21.43 9.71 29.64 2.90 F
3221 7144 0.322975 ATTGCGAGCAGAAGTGGAGT 59.677 50.000 0.00 0.00 0.00 3.85 F
4555 8625 0.827507 GGCAAGCCAAGACCAAAGGA 60.828 55.000 6.14 0.00 35.81 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1681 2615 2.501723 TCTACACAAGCTCCATCTTCCC 59.498 50.0 0.00 0.00 0.00 3.97 R
2093 3028 7.755582 AACAAATACTGCAGAAAGAAAACAC 57.244 32.0 23.35 0.00 0.00 3.32 R
3082 6870 1.226311 CCTTCATCTTTAGGGGCCCT 58.774 55.0 31.38 31.38 37.71 5.19 R
3097 6885 0.606673 GTGCCACCTCCACTTCCTTC 60.607 60.0 0.00 0.00 0.00 3.46 R
4951 9021 0.034089 ATGCCAGCACCCTTTCCTAC 60.034 55.0 0.00 0.00 0.00 3.18 R
4952 9022 0.255890 GATGCCAGCACCCTTTCCTA 59.744 55.0 0.00 0.00 0.00 2.94 R
5080 9150 0.394488 TTGGGTTCGCCAGACACAAA 60.394 50.0 0.00 0.00 39.65 2.83 R
5518 9590 0.035056 AGCGTTCCCTCCCATTTGAG 60.035 55.0 0.00 0.00 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.894126 GAGGAGTGAACAGAGAGTGGAA 59.106 50.000 0.00 0.00 0.00 3.53
26 27 3.906846 AGGAGTGAACAGAGAGTGGAATT 59.093 43.478 0.00 0.00 0.00 2.17
40 41 1.338105 TGGAATTGACTGAGCGGACTG 60.338 52.381 0.00 0.00 0.00 3.51
68 69 2.514160 AGGGTTCATCAAAGGGGGTATC 59.486 50.000 0.00 0.00 0.00 2.24
79 80 1.525442 GGGGTATCTGTGGGTTCGG 59.475 63.158 0.00 0.00 0.00 4.30
100 101 3.411114 ATGAGCCGGGCTGACATGG 62.411 63.158 29.31 0.00 39.88 3.66
139 140 2.048127 GGGCCGTCTCATATCCGC 60.048 66.667 0.00 0.00 0.00 5.54
149 150 4.082408 CGTCTCATATCCGCCCTACATTTA 60.082 45.833 0.00 0.00 0.00 1.40
150 151 5.566032 CGTCTCATATCCGCCCTACATTTAA 60.566 44.000 0.00 0.00 0.00 1.52
152 153 4.575885 TCATATCCGCCCTACATTTAAGC 58.424 43.478 0.00 0.00 0.00 3.09
168 169 1.898863 AAGCTGGATATGAGGGGTGT 58.101 50.000 0.00 0.00 0.00 4.16
214 215 1.852157 TTGAGGCACCTGGATGGGTC 61.852 60.000 0.00 0.00 41.11 4.46
255 257 2.995574 CCGGTCGGTTCACCTCCT 60.996 66.667 0.55 0.00 33.77 3.69
256 258 2.261671 CGGTCGGTTCACCTCCTG 59.738 66.667 0.00 0.00 33.77 3.86
257 259 2.663196 GGTCGGTTCACCTCCTGG 59.337 66.667 0.00 0.00 39.83 4.45
258 260 1.911766 GGTCGGTTCACCTCCTGGA 60.912 63.158 0.00 0.00 37.04 3.86
259 261 1.292541 GTCGGTTCACCTCCTGGAC 59.707 63.158 0.00 0.00 37.04 4.02
260 262 2.261671 CGGTTCACCTCCTGGACG 59.738 66.667 0.00 0.00 37.04 4.79
278 280 1.512156 CGTTTGGGGACGGTTTGAGG 61.512 60.000 0.00 0.00 39.27 3.86
307 309 8.637986 CCTGACTATAGATGCTTTTAGTCTCTT 58.362 37.037 6.78 0.00 40.64 2.85
316 318 4.821805 TGCTTTTAGTCTCTTTTGTGAGGG 59.178 41.667 0.00 0.00 34.98 4.30
350 352 5.301555 TGTCTCGTAGGACTGAGATATGAG 58.698 45.833 0.00 0.00 42.73 2.90
363 365 4.660303 TGAGATATGAGTGTTGGGCCTTAT 59.340 41.667 4.53 0.00 0.00 1.73
364 366 5.132648 TGAGATATGAGTGTTGGGCCTTATT 59.867 40.000 4.53 0.00 0.00 1.40
365 367 6.018433 AGATATGAGTGTTGGGCCTTATTT 57.982 37.500 4.53 0.00 0.00 1.40
366 368 6.435164 AGATATGAGTGTTGGGCCTTATTTT 58.565 36.000 4.53 0.00 0.00 1.82
367 369 7.582719 AGATATGAGTGTTGGGCCTTATTTTA 58.417 34.615 4.53 0.00 0.00 1.52
368 370 8.227507 AGATATGAGTGTTGGGCCTTATTTTAT 58.772 33.333 4.53 0.00 0.00 1.40
474 476 3.817787 GCATGCTCTGCGGAATCA 58.182 55.556 11.37 0.00 41.97 2.57
476 478 1.094073 GCATGCTCTGCGGAATCAGT 61.094 55.000 11.37 0.00 41.97 3.41
477 479 0.935898 CATGCTCTGCGGAATCAGTC 59.064 55.000 0.00 0.00 35.63 3.51
621 633 6.708054 AGTGAGTCAGGAGAACAAGTTTATTG 59.292 38.462 0.00 0.00 0.00 1.90
635 647 6.127366 ACAAGTTTATTGGAATGCACCATAGG 60.127 38.462 0.00 0.00 39.82 2.57
679 692 8.306313 AGAGTTTTGAGTGGGAACTAAATTTT 57.694 30.769 0.00 0.00 34.02 1.82
686 699 6.015772 TGAGTGGGAACTAAATTTTGTAAGGC 60.016 38.462 5.70 0.00 0.00 4.35
699 713 6.588719 TTTTGTAAGGCATGCAGTAAGATT 57.411 33.333 21.36 4.68 0.00 2.40
700 714 6.588719 TTTGTAAGGCATGCAGTAAGATTT 57.411 33.333 21.36 3.03 0.00 2.17
709 723 7.445402 AGGCATGCAGTAAGATTTAATTCGTAT 59.555 33.333 21.36 0.00 0.00 3.06
767 783 8.691661 AATGGCCAATATAAGAGAAATTACGT 57.308 30.769 10.96 0.00 0.00 3.57
768 784 9.787435 AATGGCCAATATAAGAGAAATTACGTA 57.213 29.630 10.96 0.00 0.00 3.57
811 828 9.425577 GAGGCATACTAATCAGTATTTTCTACC 57.574 37.037 0.00 0.00 44.05 3.18
819 836 6.786843 ATCAGTATTTTCTACCCCATCCAT 57.213 37.500 0.00 0.00 0.00 3.41
860 877 6.903883 TTTAGAGATTTCTATGCGAACCAC 57.096 37.500 0.00 0.00 35.88 4.16
865 882 3.300852 TTTCTATGCGAACCACGTACA 57.699 42.857 0.00 0.00 44.60 2.90
874 891 7.949903 ATGCGAACCACGTACAAATATATAA 57.050 32.000 0.00 0.00 44.60 0.98
914 932 6.072286 TGGAGATTCACTCATTTTGCTTCTTC 60.072 38.462 0.00 0.00 46.54 2.87
915 933 5.936054 AGATTCACTCATTTTGCTTCTTCG 58.064 37.500 0.00 0.00 0.00 3.79
916 934 5.471456 AGATTCACTCATTTTGCTTCTTCGT 59.529 36.000 0.00 0.00 0.00 3.85
917 935 6.650807 AGATTCACTCATTTTGCTTCTTCGTA 59.349 34.615 0.00 0.00 0.00 3.43
920 938 5.700832 TCACTCATTTTGCTTCTTCGTACAT 59.299 36.000 0.00 0.00 0.00 2.29
921 939 6.871492 TCACTCATTTTGCTTCTTCGTACATA 59.129 34.615 0.00 0.00 0.00 2.29
922 940 7.063426 TCACTCATTTTGCTTCTTCGTACATAG 59.937 37.037 0.00 0.00 0.00 2.23
923 941 6.313905 ACTCATTTTGCTTCTTCGTACATAGG 59.686 38.462 0.00 0.00 0.00 2.57
938 956 8.913487 TCGTACATAGGAGTAGTTCATATTGA 57.087 34.615 0.00 0.00 30.70 2.57
969 990 8.325787 TGTAGAAAGCCTTACATTTAGGAATGA 58.674 33.333 6.17 0.00 44.37 2.57
970 991 9.174166 GTAGAAAGCCTTACATTTAGGAATGAA 57.826 33.333 6.17 0.00 44.37 2.57
993 1014 6.651975 AAGGGAGTATACTTTCAGGTATCG 57.348 41.667 6.88 0.00 34.65 2.92
1007 1028 0.935196 GTATCGGGGCGCAAAAGTAG 59.065 55.000 10.83 0.00 0.00 2.57
1008 1029 0.538118 TATCGGGGCGCAAAAGTAGT 59.462 50.000 10.83 0.00 0.00 2.73
1009 1030 1.024579 ATCGGGGCGCAAAAGTAGTG 61.025 55.000 10.83 0.00 0.00 2.74
1010 1031 2.686816 CGGGGCGCAAAAGTAGTGG 61.687 63.158 10.83 0.00 0.00 4.00
1011 1032 2.340328 GGGGCGCAAAAGTAGTGGG 61.340 63.158 10.83 0.00 0.00 4.61
1015 1036 1.305930 GCGCAAAAGTAGTGGGGAGG 61.306 60.000 0.30 0.00 0.00 4.30
1031 1247 2.678336 GGGAGGTGTAGAAAAATCAGCG 59.322 50.000 0.00 0.00 35.21 5.18
1409 2283 2.500229 TGTGCCCCTCTTTCGTTTTAG 58.500 47.619 0.00 0.00 0.00 1.85
1423 2344 7.829211 TCTTTCGTTTTAGATCTTTGGGATGAT 59.171 33.333 0.00 0.00 34.33 2.45
1610 2543 3.270027 CATTCGGTCCAGCTTGTGAATA 58.730 45.455 0.00 0.00 0.00 1.75
1692 2626 3.118592 GGTACAACTGAGGGAAGATGGAG 60.119 52.174 0.00 0.00 0.00 3.86
1758 2692 8.428063 ACACTTCTGGAGATTTAATATCAGAGG 58.572 37.037 1.96 6.96 35.43 3.69
1783 2717 5.547181 AGAAAGTTAAAGCGAACCTATGC 57.453 39.130 0.00 0.00 0.00 3.14
2025 2959 3.149196 GGGCAACATGAGACTCTTGAAA 58.851 45.455 21.63 0.00 39.74 2.69
2093 3028 1.286260 GCCGGCTCATACTAGACCG 59.714 63.158 22.15 0.00 43.44 4.79
2485 6273 7.875327 TCTTGGATTTATTTGTTAGGTAGCC 57.125 36.000 0.00 0.00 0.00 3.93
3082 6870 1.642037 GCAGATTGCGAGCAGAAGCA 61.642 55.000 0.00 0.00 42.15 3.91
3097 6885 0.259938 AAGCAGGGCCCCTAAAGATG 59.740 55.000 21.43 9.71 29.64 2.90
3111 6899 4.226168 CCTAAAGATGAAGGAAGTGGAGGT 59.774 45.833 0.00 0.00 34.58 3.85
3112 6900 3.710209 AAGATGAAGGAAGTGGAGGTG 57.290 47.619 0.00 0.00 0.00 4.00
3199 7122 5.050091 CCGAAATAAAGATGACGAGATTGGG 60.050 44.000 0.00 0.00 0.00 4.12
3219 7142 1.806542 GAAATTGCGAGCAGAAGTGGA 59.193 47.619 0.00 0.00 0.00 4.02
3221 7144 0.322975 ATTGCGAGCAGAAGTGGAGT 59.677 50.000 0.00 0.00 0.00 3.85
3242 7198 3.902881 ACCTTCAGCAGAATGTAGAGG 57.097 47.619 0.00 0.00 39.31 3.69
3267 7223 3.552604 GCAAGTGGCAGTTCGAAATAA 57.447 42.857 4.17 0.00 43.97 1.40
3271 7227 4.222124 AGTGGCAGTTCGAAATAAGGAT 57.778 40.909 0.00 0.00 0.00 3.24
3273 7229 5.741011 AGTGGCAGTTCGAAATAAGGATAA 58.259 37.500 0.00 0.00 0.00 1.75
3274 7230 6.357367 AGTGGCAGTTCGAAATAAGGATAAT 58.643 36.000 0.00 0.00 0.00 1.28
3275 7231 7.506114 AGTGGCAGTTCGAAATAAGGATAATA 58.494 34.615 0.00 0.00 0.00 0.98
3276 7232 7.990886 AGTGGCAGTTCGAAATAAGGATAATAA 59.009 33.333 0.00 0.00 0.00 1.40
3277 7233 8.283291 GTGGCAGTTCGAAATAAGGATAATAAG 58.717 37.037 0.00 0.00 0.00 1.73
3278 7234 8.208224 TGGCAGTTCGAAATAAGGATAATAAGA 58.792 33.333 0.00 0.00 0.00 2.10
3279 7235 9.220767 GGCAGTTCGAAATAAGGATAATAAGAT 57.779 33.333 0.00 0.00 0.00 2.40
3302 7258 1.538512 GCAGATTGCAAGCAGAAGTGA 59.461 47.619 18.24 0.00 44.26 3.41
3306 7262 2.574006 TTGCAAGCAGAAGTGAGGAT 57.426 45.000 0.00 0.00 0.00 3.24
3311 7267 3.369892 GCAAGCAGAAGTGAGGATCCTTA 60.370 47.826 17.42 9.39 0.00 2.69
3376 7332 4.959596 AGATGTGCTGCAAATAGAAGTG 57.040 40.909 5.05 0.00 0.00 3.16
3870 7903 4.434545 AGCATCATGATTCTTGCTAGGT 57.565 40.909 17.77 2.48 43.28 3.08
4047 8102 3.441572 GTCATCCAAGTGAATCCAACTGG 59.558 47.826 0.00 0.00 0.00 4.00
4070 8133 5.712917 GGTGAATAACCCAAGAATTGTGGTA 59.287 40.000 4.46 0.00 46.99 3.25
4105 8175 7.255139 CCGATTATTACACCTGAAAATCTTCCC 60.255 40.741 0.00 0.00 0.00 3.97
4169 8239 2.932614 GCCAGTAACACATAGCACTGAG 59.067 50.000 2.27 0.00 40.67 3.35
4245 8315 1.191489 TTCAGCATCTCCACCCGTCA 61.191 55.000 0.00 0.00 0.00 4.35
4488 8558 1.074775 GACATTGACACTGCCCCCA 59.925 57.895 0.00 0.00 0.00 4.96
4555 8625 0.827507 GGCAAGCCAAGACCAAAGGA 60.828 55.000 6.14 0.00 35.81 3.36
4592 8662 1.562783 AGGAAGGTACAGAGCTGGAC 58.437 55.000 4.22 4.22 43.64 4.02
4649 8719 5.697067 CCAGAGTCTAATGTAGGTCTAGGT 58.303 45.833 0.00 0.00 0.00 3.08
4656 8726 8.478877 AGTCTAATGTAGGTCTAGGTGAAAATG 58.521 37.037 0.00 0.00 0.00 2.32
4736 8806 3.583086 AGAGCAACATAGGTGTGTTAGGT 59.417 43.478 0.00 0.00 40.17 3.08
4766 8836 1.272369 GCTACCGGTATAGGGGCTACT 60.272 57.143 16.25 0.00 35.02 2.57
4767 8837 2.444421 CTACCGGTATAGGGGCTACTG 58.556 57.143 16.25 0.00 35.02 2.74
4777 8847 0.988678 GGGGCTACTGGGGAACTGAT 60.989 60.000 0.00 0.00 0.00 2.90
4797 8867 4.179579 GCGCAAAGGATGACGCCC 62.180 66.667 0.30 0.00 43.78 6.13
4798 8868 2.745884 CGCAAAGGATGACGCCCA 60.746 61.111 0.00 0.00 0.00 5.36
4817 8887 3.306364 CCCATCAGGAGGAATGACGATAC 60.306 52.174 0.00 0.00 38.24 2.24
4889 8959 3.538379 TGCCTAGTGTGCACTCATG 57.462 52.632 19.41 10.77 42.54 3.07
4922 8992 1.776975 ATGGCAGATGGAGGCTAGGC 61.777 60.000 8.55 8.55 0.00 3.93
4948 9018 3.493334 AGCAATGTATCACCCATGATGG 58.507 45.455 3.98 3.98 45.54 3.51
4987 9057 2.622977 GGCATCCCCCTATTTTGTGACA 60.623 50.000 0.00 0.00 0.00 3.58
4993 9063 4.017958 TCCCCCTATTTTGTGACAATAGCA 60.018 41.667 0.00 0.00 34.19 3.49
4995 9065 5.363580 CCCCCTATTTTGTGACAATAGCATT 59.636 40.000 0.00 0.00 34.19 3.56
4999 9069 6.688385 CCTATTTTGTGACAATAGCATTGACG 59.312 38.462 13.53 0.00 34.19 4.35
5065 9135 3.482232 GACGATCCCCATGGCCCTG 62.482 68.421 6.09 0.00 0.00 4.45
5070 9140 4.229073 CCCCATGGCCCTGGATGG 62.229 72.222 27.26 19.36 38.69 3.51
5091 9161 3.042560 GGCACCTTTGTGTCTGGC 58.957 61.111 0.00 0.00 43.86 4.85
5092 9162 2.639286 GCACCTTTGTGTCTGGCG 59.361 61.111 0.00 0.00 44.65 5.69
5093 9163 1.891919 GCACCTTTGTGTCTGGCGA 60.892 57.895 0.00 0.00 44.65 5.54
5094 9164 1.444119 GCACCTTTGTGTCTGGCGAA 61.444 55.000 0.00 0.00 44.65 4.70
5095 9165 0.307760 CACCTTTGTGTCTGGCGAAC 59.692 55.000 0.00 0.00 37.72 3.95
5096 9166 0.818040 ACCTTTGTGTCTGGCGAACC 60.818 55.000 0.00 0.00 0.00 3.62
5097 9167 1.515521 CCTTTGTGTCTGGCGAACCC 61.516 60.000 0.00 0.00 33.59 4.11
5098 9168 0.817634 CTTTGTGTCTGGCGAACCCA 60.818 55.000 0.00 0.00 42.79 4.51
5099 9169 0.394488 TTTGTGTCTGGCGAACCCAA 60.394 50.000 0.00 0.00 44.81 4.12
5100 9170 0.817634 TTGTGTCTGGCGAACCCAAG 60.818 55.000 0.00 0.00 44.81 3.61
5101 9171 1.227853 GTGTCTGGCGAACCCAAGT 60.228 57.895 0.00 0.00 44.81 3.16
5102 9172 1.070786 TGTCTGGCGAACCCAAGTC 59.929 57.895 0.00 0.00 44.81 3.01
5103 9173 1.070786 GTCTGGCGAACCCAAGTCA 59.929 57.895 0.00 0.00 44.81 3.41
5104 9174 1.070786 TCTGGCGAACCCAAGTCAC 59.929 57.895 0.00 0.00 44.81 3.67
5105 9175 1.227823 CTGGCGAACCCAAGTCACA 60.228 57.895 0.00 0.00 44.81 3.58
5106 9176 0.606401 CTGGCGAACCCAAGTCACAT 60.606 55.000 0.00 0.00 44.81 3.21
5107 9177 0.888736 TGGCGAACCCAAGTCACATG 60.889 55.000 0.00 0.00 41.82 3.21
5108 9178 0.605319 GGCGAACCCAAGTCACATGA 60.605 55.000 0.00 0.00 0.00 3.07
5109 9179 0.798776 GCGAACCCAAGTCACATGAG 59.201 55.000 0.00 0.00 0.00 2.90
5110 9180 1.608025 GCGAACCCAAGTCACATGAGA 60.608 52.381 0.00 0.00 0.00 3.27
5111 9181 2.341257 CGAACCCAAGTCACATGAGAG 58.659 52.381 0.00 0.00 0.00 3.20
5147 9217 6.092670 TGGATTCTGCTCAAGAGAATTAAACG 59.907 38.462 0.32 0.00 39.72 3.60
5155 9225 7.870954 TGCTCAAGAGAATTAAACGAAACTCTA 59.129 33.333 0.32 0.00 35.34 2.43
5206 9276 0.537188 CGAGACTATGTGGCAAGGGT 59.463 55.000 0.00 0.00 0.00 4.34
5207 9277 1.066143 CGAGACTATGTGGCAAGGGTT 60.066 52.381 0.00 0.00 0.00 4.11
5258 9329 9.527157 TGAAACATATAACAGGGAATTTCAGAA 57.473 29.630 0.00 0.00 32.59 3.02
5320 9392 1.078988 GCCGGGTTGGACGTATGAA 60.079 57.895 2.18 0.00 42.00 2.57
5375 9447 1.339055 GGCTTGACAGATGTGTGGCTA 60.339 52.381 0.00 0.00 36.88 3.93
5400 9472 2.742053 CGGAATGGAATGACGTGTTTCT 59.258 45.455 0.00 0.00 0.00 2.52
5402 9474 3.119849 GGAATGGAATGACGTGTTTCTGG 60.120 47.826 0.00 0.00 0.00 3.86
5405 9477 1.459592 GGAATGACGTGTTTCTGGACG 59.540 52.381 0.00 0.00 41.41 4.79
5451 9523 7.489574 TTTTGAATTGTTTGGATTGCTTACC 57.510 32.000 0.00 0.00 0.00 2.85
5453 9525 5.537188 TGAATTGTTTGGATTGCTTACCAC 58.463 37.500 0.00 0.00 35.81 4.16
5454 9526 5.069648 TGAATTGTTTGGATTGCTTACCACA 59.930 36.000 0.00 0.00 35.81 4.17
5455 9527 5.743636 ATTGTTTGGATTGCTTACCACAT 57.256 34.783 0.00 0.00 35.81 3.21
5456 9528 4.517952 TGTTTGGATTGCTTACCACATG 57.482 40.909 0.00 0.00 35.81 3.21
5457 9529 3.894427 TGTTTGGATTGCTTACCACATGT 59.106 39.130 0.00 0.00 35.81 3.21
5460 9532 4.782019 TGGATTGCTTACCACATGTTTC 57.218 40.909 0.00 0.00 0.00 2.78
5461 9533 4.148079 TGGATTGCTTACCACATGTTTCA 58.852 39.130 0.00 0.00 0.00 2.69
5462 9534 4.771577 TGGATTGCTTACCACATGTTTCAT 59.228 37.500 0.00 0.00 0.00 2.57
5464 9536 6.606796 TGGATTGCTTACCACATGTTTCATAT 59.393 34.615 0.00 0.00 0.00 1.78
5465 9537 6.919662 GGATTGCTTACCACATGTTTCATATG 59.080 38.462 0.00 0.00 0.00 1.78
5466 9538 5.833406 TGCTTACCACATGTTTCATATGG 57.167 39.130 2.13 5.63 36.46 2.74
5467 9539 5.260424 TGCTTACCACATGTTTCATATGGT 58.740 37.500 15.39 15.39 45.56 3.55
5468 9540 5.356751 TGCTTACCACATGTTTCATATGGTC 59.643 40.000 14.65 3.86 42.69 4.02
5471 9543 5.840243 ACCACATGTTTCATATGGTCATG 57.160 39.130 21.87 21.87 39.51 3.07
5472 9544 5.263599 ACCACATGTTTCATATGGTCATGT 58.736 37.500 22.70 22.70 46.20 3.21
5473 9545 5.716228 ACCACATGTTTCATATGGTCATGTT 59.284 36.000 24.32 15.73 43.97 2.71
5474 9546 6.127647 ACCACATGTTTCATATGGTCATGTTC 60.128 38.462 24.32 4.64 43.97 3.18
5475 9547 6.127675 CCACATGTTTCATATGGTCATGTTCA 60.128 38.462 24.32 8.53 43.97 3.18
5476 9548 6.970613 CACATGTTTCATATGGTCATGTTCAG 59.029 38.462 24.32 16.26 43.97 3.02
5477 9549 5.565592 TGTTTCATATGGTCATGTTCAGC 57.434 39.130 2.13 0.00 0.00 4.26
5478 9550 5.008980 TGTTTCATATGGTCATGTTCAGCA 58.991 37.500 2.13 0.00 0.00 4.41
5479 9551 5.653330 TGTTTCATATGGTCATGTTCAGCAT 59.347 36.000 2.13 3.45 38.60 3.79
5517 9589 2.498078 CAGACCACTTTCCTCTCCTACC 59.502 54.545 0.00 0.00 0.00 3.18
5518 9590 1.832366 GACCACTTTCCTCTCCTACCC 59.168 57.143 0.00 0.00 0.00 3.69
5552 9631 0.663568 ACGCTCTCGAAAGAACACGG 60.664 55.000 0.00 0.00 41.32 4.94
5626 9705 2.131183 GCAGTTCAGGCGATATGAGAC 58.869 52.381 0.00 0.00 0.00 3.36
5638 9717 1.162181 TATGAGACGGCGAGGGTACG 61.162 60.000 16.62 0.00 0.00 3.67
5654 9733 0.180642 TACGGCACAAAACCTGTCCA 59.819 50.000 0.00 0.00 35.47 4.02
5672 9751 3.630312 GTCCAAGGTTGCACTAAAGTTGA 59.370 43.478 0.00 0.00 0.00 3.18
5684 9764 7.598278 TGCACTAAAGTTGAAAAAGTTCAGAA 58.402 30.769 0.00 0.00 44.49 3.02
5700 9780 0.886490 AGAAGTCGTTGGCAGCTTGG 60.886 55.000 0.00 0.00 0.00 3.61
5762 9849 8.738645 AAAAAGAAGAGACAGAAGCTTAGAAA 57.261 30.769 0.00 0.00 0.00 2.52
5800 9887 1.281899 GTCCAGTGCTAACGATGAGC 58.718 55.000 0.00 0.00 40.53 4.26
5819 9906 2.560981 AGCAAATTAAAAGGGTGTCCGG 59.439 45.455 0.00 0.00 38.33 5.14
5843 9930 4.931601 TGAGTTGGATGAACTTCTGATTCG 59.068 41.667 0.00 0.00 45.48 3.34
5862 9953 1.138859 CGGGAGATGATGTGGCTACAA 59.861 52.381 7.10 0.00 40.84 2.41
5917 10009 5.101628 CCAAAACATGAAATATGTCCACCG 58.898 41.667 0.00 0.00 0.00 4.94
5918 10010 5.336372 CCAAAACATGAAATATGTCCACCGT 60.336 40.000 0.00 0.00 0.00 4.83
5920 10012 5.975693 AACATGAAATATGTCCACCGTTT 57.024 34.783 0.00 0.00 0.00 3.60
5921 10013 5.309323 ACATGAAATATGTCCACCGTTTG 57.691 39.130 0.00 0.00 0.00 2.93
5922 10014 3.840890 TGAAATATGTCCACCGTTTGC 57.159 42.857 0.00 0.00 0.00 3.68
5924 10016 2.208132 AATATGTCCACCGTTTGCCA 57.792 45.000 0.00 0.00 0.00 4.92
5925 10017 2.208132 ATATGTCCACCGTTTGCCAA 57.792 45.000 0.00 0.00 0.00 4.52
5926 10018 2.208132 TATGTCCACCGTTTGCCAAT 57.792 45.000 0.00 0.00 0.00 3.16
5927 10019 0.602562 ATGTCCACCGTTTGCCAATG 59.397 50.000 0.00 0.00 0.00 2.82
5930 10022 0.671251 TCCACCGTTTGCCAATGAAC 59.329 50.000 0.00 0.00 0.00 3.18
5931 10023 0.662970 CCACCGTTTGCCAATGAACG 60.663 55.000 1.98 1.98 45.89 3.95
5932 10024 1.007849 ACCGTTTGCCAATGAACGC 60.008 52.632 3.34 0.00 45.20 4.84
5935 10027 1.135546 CCGTTTGCCAATGAACGCATA 60.136 47.619 3.34 0.00 45.20 3.14
5937 10029 2.531103 CGTTTGCCAATGAACGCATATG 59.469 45.455 0.00 0.00 41.54 1.78
5938 10030 3.510719 GTTTGCCAATGAACGCATATGT 58.489 40.909 4.29 0.00 34.35 2.29
5939 10031 3.865011 TTGCCAATGAACGCATATGTT 57.135 38.095 4.29 0.00 34.35 2.71
5941 10033 4.285807 TGCCAATGAACGCATATGTTAC 57.714 40.909 4.29 0.00 33.44 2.50
5942 10034 3.066064 TGCCAATGAACGCATATGTTACC 59.934 43.478 4.29 0.00 33.44 2.85
5943 10035 3.066064 GCCAATGAACGCATATGTTACCA 59.934 43.478 4.29 0.00 33.44 3.25
5945 10037 5.034152 CCAATGAACGCATATGTTACCAAC 58.966 41.667 4.29 0.00 33.44 3.77
5959 10051 6.907853 TGTTACCAACATTTCAATCCATCA 57.092 33.333 0.00 0.00 36.25 3.07
5961 10053 6.266330 TGTTACCAACATTTCAATCCATCACA 59.734 34.615 0.00 0.00 36.25 3.58
5963 10055 6.172136 ACCAACATTTCAATCCATCACAAA 57.828 33.333 0.00 0.00 0.00 2.83
5964 10056 5.990996 ACCAACATTTCAATCCATCACAAAC 59.009 36.000 0.00 0.00 0.00 2.93
5965 10057 5.990386 CCAACATTTCAATCCATCACAAACA 59.010 36.000 0.00 0.00 0.00 2.83
5966 10058 6.482641 CCAACATTTCAATCCATCACAAACAA 59.517 34.615 0.00 0.00 0.00 2.83
5967 10059 7.173562 CCAACATTTCAATCCATCACAAACAAT 59.826 33.333 0.00 0.00 0.00 2.71
5970 10062 9.775854 ACATTTCAATCCATCACAAACAATTTA 57.224 25.926 0.00 0.00 0.00 1.40
5973 10065 9.474920 TTTCAATCCATCACAAACAATTTACTC 57.525 29.630 0.00 0.00 0.00 2.59
5974 10066 7.601856 TCAATCCATCACAAACAATTTACTCC 58.398 34.615 0.00 0.00 0.00 3.85
5975 10067 5.975693 TCCATCACAAACAATTTACTCCC 57.024 39.130 0.00 0.00 0.00 4.30
5977 10069 5.710099 TCCATCACAAACAATTTACTCCCTC 59.290 40.000 0.00 0.00 0.00 4.30
5979 10071 4.069304 TCACAAACAATTTACTCCCTCCG 58.931 43.478 0.00 0.00 0.00 4.63
5981 10073 4.277423 CACAAACAATTTACTCCCTCCGTT 59.723 41.667 0.00 0.00 0.00 4.44
5982 10074 4.517832 ACAAACAATTTACTCCCTCCGTTC 59.482 41.667 0.00 0.00 0.00 3.95
5984 10076 2.277084 CAATTTACTCCCTCCGTTCGG 58.723 52.381 4.74 4.74 0.00 4.30
5986 10078 1.631405 TTTACTCCCTCCGTTCGGAA 58.369 50.000 14.79 0.04 33.41 4.30
5988 10080 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
5989 10081 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5990 10082 2.395619 ACTCCCTCCGTTCGGAATTAT 58.604 47.619 14.79 0.00 33.41 1.28
5991 10083 2.770232 ACTCCCTCCGTTCGGAATTATT 59.230 45.455 14.79 0.00 33.41 1.40
5993 10085 3.537580 TCCCTCCGTTCGGAATTATTTG 58.462 45.455 14.79 1.97 33.41 2.32
5994 10086 3.054948 TCCCTCCGTTCGGAATTATTTGT 60.055 43.478 14.79 0.00 33.41 2.83
5995 10087 3.311596 CCCTCCGTTCGGAATTATTTGTC 59.688 47.826 14.79 0.00 33.41 3.18
5996 10088 4.189231 CCTCCGTTCGGAATTATTTGTCT 58.811 43.478 14.79 0.00 33.41 3.41
5997 10089 4.270325 CCTCCGTTCGGAATTATTTGTCTC 59.730 45.833 14.79 0.00 33.41 3.36
5998 10090 3.861113 TCCGTTCGGAATTATTTGTCTCG 59.139 43.478 11.66 0.00 0.00 4.04
5999 10091 3.861113 CCGTTCGGAATTATTTGTCTCGA 59.139 43.478 5.19 0.00 0.00 4.04
6002 10094 6.301108 CGTTCGGAATTATTTGTCTCGAAAA 58.699 36.000 0.00 0.00 37.00 2.29
6003 10095 6.959311 CGTTCGGAATTATTTGTCTCGAAAAT 59.041 34.615 0.00 0.00 37.00 1.82
6004 10096 7.045612 CGTTCGGAATTATTTGTCTCGAAAATG 60.046 37.037 4.22 0.00 37.00 2.32
6005 10097 7.603963 TCGGAATTATTTGTCTCGAAAATGA 57.396 32.000 4.22 0.00 0.00 2.57
6006 10098 8.035165 TCGGAATTATTTGTCTCGAAAATGAA 57.965 30.769 4.22 0.00 0.00 2.57
6008 10100 8.736742 CGGAATTATTTGTCTCGAAAATGAATG 58.263 33.333 4.22 0.00 0.00 2.67
6047 10139 9.698309 AAATACGTCTAGATACATCCATTTCTG 57.302 33.333 0.00 0.00 0.00 3.02
6048 10140 6.716934 ACGTCTAGATACATCCATTTCTGT 57.283 37.500 0.00 0.00 0.00 3.41
6049 10141 6.507900 ACGTCTAGATACATCCATTTCTGTG 58.492 40.000 0.00 0.00 0.00 3.66
6050 10142 6.321435 ACGTCTAGATACATCCATTTCTGTGA 59.679 38.462 0.00 0.00 0.00 3.58
6051 10143 6.638873 CGTCTAGATACATCCATTTCTGTGAC 59.361 42.308 0.00 0.00 0.00 3.67
6052 10144 7.492524 GTCTAGATACATCCATTTCTGTGACA 58.507 38.462 0.00 0.00 0.00 3.58
6053 10145 7.981789 GTCTAGATACATCCATTTCTGTGACAA 59.018 37.037 0.00 0.00 0.00 3.18
6054 10146 8.200120 TCTAGATACATCCATTTCTGTGACAAG 58.800 37.037 0.00 0.00 0.00 3.16
6056 10148 7.851228 AGATACATCCATTTCTGTGACAAGTA 58.149 34.615 0.00 0.00 0.00 2.24
6057 10149 8.321353 AGATACATCCATTTCTGTGACAAGTAA 58.679 33.333 0.00 0.00 0.00 2.24
6058 10150 9.113838 GATACATCCATTTCTGTGACAAGTAAT 57.886 33.333 0.00 0.00 0.00 1.89
6059 10151 7.765695 ACATCCATTTCTGTGACAAGTAATT 57.234 32.000 0.00 0.00 0.00 1.40
6060 10152 7.820648 ACATCCATTTCTGTGACAAGTAATTC 58.179 34.615 0.00 0.00 0.00 2.17
6062 10154 5.411361 TCCATTTCTGTGACAAGTAATTCCG 59.589 40.000 0.00 0.00 0.00 4.30
6064 10156 6.072728 CCATTTCTGTGACAAGTAATTCCGAA 60.073 38.462 0.00 0.00 0.00 4.30
6065 10157 5.917541 TTCTGTGACAAGTAATTCCGAAC 57.082 39.130 0.00 0.00 0.00 3.95
6066 10158 3.985279 TCTGTGACAAGTAATTCCGAACG 59.015 43.478 0.00 0.00 0.00 3.95
6067 10159 3.061322 TGTGACAAGTAATTCCGAACGG 58.939 45.455 6.94 6.94 0.00 4.44
6068 10160 3.243805 TGTGACAAGTAATTCCGAACGGA 60.244 43.478 12.04 12.04 43.52 4.69
6069 10161 3.367025 GTGACAAGTAATTCCGAACGGAG 59.633 47.826 15.34 5.60 46.06 4.63
6070 10162 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
6072 10164 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
6073 10165 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
6075 10167 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
6076 10168 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
6077 10169 0.038744 TTCCGAACGGAGGGAGTAGT 59.961 55.000 15.34 0.00 46.06 2.73
6078 10170 0.038744 TCCGAACGGAGGGAGTAGTT 59.961 55.000 12.04 0.00 39.76 2.24
6079 10171 0.893447 CCGAACGGAGGGAGTAGTTT 59.107 55.000 7.53 0.00 37.50 2.66
6080 10172 1.274447 CCGAACGGAGGGAGTAGTTTT 59.726 52.381 7.53 0.00 37.50 2.43
6081 10173 2.334838 CGAACGGAGGGAGTAGTTTTG 58.665 52.381 0.00 0.00 0.00 2.44
6082 10174 2.288640 CGAACGGAGGGAGTAGTTTTGT 60.289 50.000 0.00 0.00 0.00 2.83
6083 10175 3.057315 CGAACGGAGGGAGTAGTTTTGTA 60.057 47.826 0.00 0.00 0.00 2.41
6084 10176 4.559300 CGAACGGAGGGAGTAGTTTTGTAA 60.559 45.833 0.00 0.00 0.00 2.41
6087 10179 3.683340 CGGAGGGAGTAGTTTTGTAAAGC 59.317 47.826 0.00 0.00 0.00 3.51
6088 10180 3.683340 GGAGGGAGTAGTTTTGTAAAGCG 59.317 47.826 0.00 0.00 0.00 4.68
6089 10181 4.313282 GAGGGAGTAGTTTTGTAAAGCGT 58.687 43.478 0.00 0.00 0.00 5.07
6091 10183 5.128205 AGGGAGTAGTTTTGTAAAGCGTTT 58.872 37.500 0.00 0.00 0.00 3.60
6092 10184 5.008316 AGGGAGTAGTTTTGTAAAGCGTTTG 59.992 40.000 0.00 0.00 0.00 2.93
6093 10185 4.673761 GGAGTAGTTTTGTAAAGCGTTTGC 59.326 41.667 0.00 0.00 43.24 3.68
6094 10186 4.603985 AGTAGTTTTGTAAAGCGTTTGCC 58.396 39.130 0.00 0.00 44.31 4.52
6095 10187 3.512033 AGTTTTGTAAAGCGTTTGCCA 57.488 38.095 0.00 0.00 44.31 4.92
6096 10188 3.851098 AGTTTTGTAAAGCGTTTGCCAA 58.149 36.364 0.00 0.00 44.31 4.52
6098 10190 4.269844 AGTTTTGTAAAGCGTTTGCCAATG 59.730 37.500 0.00 0.00 44.31 2.82
6099 10191 3.717400 TTGTAAAGCGTTTGCCAATGA 57.283 38.095 0.00 0.00 44.31 2.57
6101 10193 3.376540 TGTAAAGCGTTTGCCAATGAAC 58.623 40.909 0.00 0.00 44.31 3.18
6103 10195 1.851658 AAGCGTTTGCCAATGAACAC 58.148 45.000 0.00 0.00 44.31 3.32
6104 10196 0.743688 AGCGTTTGCCAATGAACACA 59.256 45.000 0.00 0.00 44.31 3.72
6105 10197 1.340889 AGCGTTTGCCAATGAACACAT 59.659 42.857 0.00 0.00 44.31 3.21
6106 10198 1.456544 GCGTTTGCCAATGAACACATG 59.543 47.619 0.00 0.00 33.98 3.21
6107 10199 2.741612 CGTTTGCCAATGAACACATGT 58.258 42.857 0.00 0.00 0.00 3.21
6108 10200 2.472115 CGTTTGCCAATGAACACATGTG 59.528 45.455 24.25 24.25 0.00 3.21
6122 10214 5.843673 ACACATGTGTTACCAACATTTCA 57.156 34.783 25.76 0.00 44.35 2.69
6123 10215 6.214191 ACACATGTGTTACCAACATTTCAA 57.786 33.333 25.76 0.00 44.35 2.69
6124 10216 6.815089 ACACATGTGTTACCAACATTTCAAT 58.185 32.000 25.76 0.00 44.35 2.57
6125 10217 6.922957 ACACATGTGTTACCAACATTTCAATC 59.077 34.615 25.76 0.00 44.35 2.67
6126 10218 6.087952 CACATGTGTTACCAACATTTCAATCG 59.912 38.462 18.03 0.00 44.35 3.34
6127 10219 5.759506 TGTGTTACCAACATTTCAATCGT 57.240 34.783 0.00 0.00 44.35 3.73
6128 10220 5.515184 TGTGTTACCAACATTTCAATCGTG 58.485 37.500 0.00 0.00 44.35 4.35
6129 10221 4.381566 GTGTTACCAACATTTCAATCGTGC 59.618 41.667 0.00 0.00 44.35 5.34
6130 10222 2.330231 ACCAACATTTCAATCGTGCG 57.670 45.000 0.00 0.00 0.00 5.34
6131 10223 0.984109 CCAACATTTCAATCGTGCGC 59.016 50.000 0.00 0.00 0.00 6.09
6132 10224 0.629767 CAACATTTCAATCGTGCGCG 59.370 50.000 14.79 14.79 39.92 6.86
6133 10225 0.237235 AACATTTCAATCGTGCGCGT 59.763 45.000 20.50 4.13 39.49 6.01
6134 10226 0.237235 ACATTTCAATCGTGCGCGTT 59.763 45.000 20.50 8.73 39.49 4.84
6135 10227 1.461512 ACATTTCAATCGTGCGCGTTA 59.538 42.857 20.50 0.62 39.49 3.18
6136 10228 1.831812 CATTTCAATCGTGCGCGTTAC 59.168 47.619 20.50 6.78 39.49 2.50
6137 10229 0.859882 TTTCAATCGTGCGCGTTACA 59.140 45.000 20.50 0.00 39.49 2.41
6138 10230 0.859882 TTCAATCGTGCGCGTTACAA 59.140 45.000 20.50 6.19 39.49 2.41
6139 10231 0.162082 TCAATCGTGCGCGTTACAAC 59.838 50.000 20.50 0.00 39.49 3.32
6140 10232 0.111045 CAATCGTGCGCGTTACAACA 60.111 50.000 20.50 0.00 39.49 3.33
6141 10233 0.582482 AATCGTGCGCGTTACAACAA 59.418 45.000 20.50 0.00 39.49 2.83
6142 10234 0.111001 ATCGTGCGCGTTACAACAAC 60.111 50.000 20.50 0.00 39.49 3.32
6143 10235 1.012124 CGTGCGCGTTACAACAACA 60.012 52.632 12.43 0.00 0.00 3.33
6144 10236 0.586748 CGTGCGCGTTACAACAACAA 60.587 50.000 12.43 0.00 0.00 2.83
6145 10237 1.536149 GTGCGCGTTACAACAACAAA 58.464 45.000 8.43 0.00 0.00 2.83
6146 10238 2.113289 GTGCGCGTTACAACAACAAAT 58.887 42.857 8.43 0.00 0.00 2.32
6147 10239 2.150424 GTGCGCGTTACAACAACAAATC 59.850 45.455 8.43 0.00 0.00 2.17
6148 10240 1.377505 GCGCGTTACAACAACAAATCG 59.622 47.619 8.43 0.00 0.00 3.34
6149 10241 1.377505 CGCGTTACAACAACAAATCGC 59.622 47.619 0.00 0.00 39.21 4.58
6150 10242 2.376956 GCGTTACAACAACAAATCGCA 58.623 42.857 0.00 0.00 41.59 5.10
6151 10243 2.150424 GCGTTACAACAACAAATCGCAC 59.850 45.455 0.00 0.00 41.59 5.34
6152 10244 3.355270 CGTTACAACAACAAATCGCACA 58.645 40.909 0.00 0.00 0.00 4.57
6153 10245 3.176867 CGTTACAACAACAAATCGCACAC 59.823 43.478 0.00 0.00 0.00 3.82
6154 10246 2.929531 ACAACAACAAATCGCACACA 57.070 40.000 0.00 0.00 0.00 3.72
6155 10247 2.525055 ACAACAACAAATCGCACACAC 58.475 42.857 0.00 0.00 0.00 3.82
6156 10248 2.095008 ACAACAACAAATCGCACACACA 60.095 40.909 0.00 0.00 0.00 3.72
6157 10249 2.473530 ACAACAAATCGCACACACAG 57.526 45.000 0.00 0.00 0.00 3.66
6158 10250 1.122849 CAACAAATCGCACACACAGC 58.877 50.000 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.346418 AGTCAATTCCACTCTCTGTTCACT 59.654 41.667 0.00 0.00 0.00 3.41
24 25 0.390866 CTGCAGTCCGCTCAGTCAAT 60.391 55.000 5.25 0.00 43.06 2.57
26 27 1.748329 AACTGCAGTCCGCTCAGTCA 61.748 55.000 21.95 0.00 39.86 3.41
40 41 3.193479 CCCTTTGATGAACCCTAAACTGC 59.807 47.826 0.00 0.00 0.00 4.40
45 46 2.364190 ACCCCCTTTGATGAACCCTAA 58.636 47.619 0.00 0.00 0.00 2.69
68 69 1.021390 GCTCATCACCGAACCCACAG 61.021 60.000 0.00 0.00 0.00 3.66
79 80 2.512515 GTCAGCCCGGCTCATCAC 60.513 66.667 9.68 0.04 36.40 3.06
93 94 2.032634 GGACGCTTTCGCCATGTCA 61.033 57.895 0.00 0.00 39.84 3.58
100 101 2.813908 ATGTCCGGACGCTTTCGC 60.814 61.111 28.70 3.65 39.84 4.70
103 104 2.746277 GGCATGTCCGGACGCTTT 60.746 61.111 28.70 11.40 0.00 3.51
128 129 5.568825 GCTTAAATGTAGGGCGGATATGAGA 60.569 44.000 0.00 0.00 0.00 3.27
139 140 6.176183 CCTCATATCCAGCTTAAATGTAGGG 58.824 44.000 0.00 0.00 0.00 3.53
149 150 1.771255 GACACCCCTCATATCCAGCTT 59.229 52.381 0.00 0.00 0.00 3.74
150 151 1.428869 GACACCCCTCATATCCAGCT 58.571 55.000 0.00 0.00 0.00 4.24
152 153 0.681733 CCGACACCCCTCATATCCAG 59.318 60.000 0.00 0.00 0.00 3.86
180 181 4.656117 CAAACCGGCCCCAAACGC 62.656 66.667 0.00 0.00 0.00 4.84
181 182 2.907917 TCAAACCGGCCCCAAACG 60.908 61.111 0.00 0.00 0.00 3.60
182 183 2.570284 CCTCAAACCGGCCCCAAAC 61.570 63.158 0.00 0.00 0.00 2.93
193 194 0.967380 CCCATCCAGGTGCCTCAAAC 60.967 60.000 0.00 0.00 34.66 2.93
202 203 1.064825 AAAGAACGACCCATCCAGGT 58.935 50.000 0.00 0.00 45.12 4.00
253 255 2.358247 CGTCCCCAAACGTCCAGG 60.358 66.667 0.00 0.00 37.86 4.45
254 256 2.358247 CCGTCCCCAAACGTCCAG 60.358 66.667 0.00 0.00 41.01 3.86
255 257 2.268167 AAACCGTCCCCAAACGTCCA 62.268 55.000 0.00 0.00 41.01 4.02
256 258 1.526686 AAACCGTCCCCAAACGTCC 60.527 57.895 0.00 0.00 41.01 4.79
257 259 0.814812 TCAAACCGTCCCCAAACGTC 60.815 55.000 0.00 0.00 41.01 4.34
258 260 0.816421 CTCAAACCGTCCCCAAACGT 60.816 55.000 0.00 0.00 41.01 3.99
259 261 1.512156 CCTCAAACCGTCCCCAAACG 61.512 60.000 0.00 0.00 42.24 3.60
260 262 0.466739 ACCTCAAACCGTCCCCAAAC 60.467 55.000 0.00 0.00 0.00 2.93
278 280 6.284459 ACTAAAAGCATCTATAGTCAGGCAC 58.716 40.000 0.00 0.00 0.00 5.01
474 476 3.311486 GCTCAGAGCAGTTTACAGACT 57.689 47.619 18.17 0.00 41.89 3.24
501 503 8.530311 TGCTCAAAGATTGGATTTAAGCAATTA 58.470 29.630 0.00 0.00 34.57 1.40
538 545 8.942338 AAATCGACACTAACATTCATAAGCTA 57.058 30.769 0.00 0.00 0.00 3.32
621 633 4.799564 TGTTTTTCCTATGGTGCATTCC 57.200 40.909 0.00 0.00 0.00 3.01
679 692 7.880160 ATTAAATCTTACTGCATGCCTTACA 57.120 32.000 16.68 0.00 0.00 2.41
735 751 8.765488 TTCTCTTATATTGGCCATTTGATTCA 57.235 30.769 6.09 0.00 0.00 2.57
768 784 9.686683 AGTATGCCTCTTCAAATTTTAGTACAT 57.313 29.630 0.00 0.00 0.00 2.29
849 866 9.473640 TTTATATATTTGTACGTGGTTCGCATA 57.526 29.630 0.00 0.00 44.19 3.14
852 869 8.115520 TGTTTTATATATTTGTACGTGGTTCGC 58.884 33.333 0.00 0.00 44.19 4.70
874 891 9.965902 AGTGAATCTCCACTCTAAAATATGTTT 57.034 29.630 0.00 0.00 43.34 2.83
891 909 6.020372 CGAAGAAGCAAAATGAGTGAATCTC 58.980 40.000 0.00 0.00 43.03 2.75
914 932 9.961265 TTTCAATATGAACTACTCCTATGTACG 57.039 33.333 0.00 0.00 35.89 3.67
942 963 8.956426 CATTCCTAAATGTAAGGCTTTCTACAA 58.044 33.333 4.45 0.00 37.97 2.41
947 968 8.917415 CTTTCATTCCTAAATGTAAGGCTTTC 57.083 34.615 4.45 0.00 42.24 2.62
957 978 9.853177 AAGTATACTCCCTTTCATTCCTAAATG 57.147 33.333 5.70 0.00 43.10 2.32
969 990 6.041751 CCGATACCTGAAAGTATACTCCCTTT 59.958 42.308 5.70 0.00 33.05 3.11
970 991 5.539193 CCGATACCTGAAAGTATACTCCCTT 59.461 44.000 5.70 0.00 33.05 3.95
985 1006 1.714899 CTTTTGCGCCCCGATACCTG 61.715 60.000 4.18 0.00 0.00 4.00
993 1014 2.340328 CCCACTACTTTTGCGCCCC 61.340 63.158 4.18 0.00 0.00 5.80
1007 1028 4.010349 CTGATTTTTCTACACCTCCCCAC 58.990 47.826 0.00 0.00 0.00 4.61
1008 1029 3.561313 GCTGATTTTTCTACACCTCCCCA 60.561 47.826 0.00 0.00 0.00 4.96
1009 1030 3.017442 GCTGATTTTTCTACACCTCCCC 58.983 50.000 0.00 0.00 0.00 4.81
1010 1031 2.678336 CGCTGATTTTTCTACACCTCCC 59.322 50.000 0.00 0.00 0.00 4.30
1011 1032 2.096013 GCGCTGATTTTTCTACACCTCC 59.904 50.000 0.00 0.00 0.00 4.30
1015 1036 1.810151 TGGGCGCTGATTTTTCTACAC 59.190 47.619 7.64 0.00 0.00 2.90
1409 2283 6.302269 ACAGGTTATCATCATCCCAAAGATC 58.698 40.000 0.00 0.00 30.59 2.75
1423 2344 4.081087 GGTGCCTTCTTCTACAGGTTATCA 60.081 45.833 0.00 0.00 32.06 2.15
1681 2615 2.501723 TCTACACAAGCTCCATCTTCCC 59.498 50.000 0.00 0.00 0.00 3.97
1692 2626 6.578919 GTGTTTTCATTAAGCTCTACACAAGC 59.421 38.462 0.00 0.00 40.14 4.01
1758 2692 6.959871 GCATAGGTTCGCTTTAACTTTCTTAC 59.040 38.462 0.00 0.00 0.00 2.34
2093 3028 7.755582 AACAAATACTGCAGAAAGAAAACAC 57.244 32.000 23.35 0.00 0.00 3.32
3082 6870 1.226311 CCTTCATCTTTAGGGGCCCT 58.774 55.000 31.38 31.38 37.71 5.19
3097 6885 0.606673 GTGCCACCTCCACTTCCTTC 60.607 60.000 0.00 0.00 0.00 3.46
3199 7122 1.806542 TCCACTTCTGCTCGCAATTTC 59.193 47.619 0.00 0.00 0.00 2.17
3219 7142 4.404073 CCTCTACATTCTGCTGAAGGTACT 59.596 45.833 21.96 5.94 44.09 2.73
3221 7144 4.610333 TCCTCTACATTCTGCTGAAGGTA 58.390 43.478 23.53 23.53 44.09 3.08
3267 7223 6.309357 TGCAATCTGCCAATCTTATTATCCT 58.691 36.000 0.00 0.00 44.23 3.24
3271 7227 5.360429 TGCTTGCAATCTGCCAATCTTATTA 59.640 36.000 0.00 0.00 44.23 0.98
3273 7229 3.702548 TGCTTGCAATCTGCCAATCTTAT 59.297 39.130 0.00 0.00 44.23 1.73
3274 7230 3.090790 TGCTTGCAATCTGCCAATCTTA 58.909 40.909 0.00 0.00 44.23 2.10
3275 7231 1.897133 TGCTTGCAATCTGCCAATCTT 59.103 42.857 0.00 0.00 44.23 2.40
3276 7232 1.476891 CTGCTTGCAATCTGCCAATCT 59.523 47.619 0.00 0.00 44.23 2.40
3277 7233 1.475280 TCTGCTTGCAATCTGCCAATC 59.525 47.619 0.00 0.00 44.23 2.67
3278 7234 1.552578 TCTGCTTGCAATCTGCCAAT 58.447 45.000 0.00 0.00 44.23 3.16
3279 7235 1.271379 CTTCTGCTTGCAATCTGCCAA 59.729 47.619 0.00 0.00 44.23 4.52
3280 7236 0.885879 CTTCTGCTTGCAATCTGCCA 59.114 50.000 0.00 0.00 44.23 4.92
3300 7256 7.393234 CCACTTGTTTTATGTTAAGGATCCTCA 59.607 37.037 16.52 9.60 0.00 3.86
3302 7258 7.466804 TCCACTTGTTTTATGTTAAGGATCCT 58.533 34.615 9.02 9.02 0.00 3.24
3306 7262 5.475564 GGCTCCACTTGTTTTATGTTAAGGA 59.524 40.000 0.00 0.00 0.00 3.36
3311 7267 3.005791 GCTGGCTCCACTTGTTTTATGTT 59.994 43.478 0.00 0.00 0.00 2.71
3376 7332 5.006746 ACAATTCTCGTCATCCTTATTTCGC 59.993 40.000 0.00 0.00 0.00 4.70
3632 7603 4.098914 TGGCAAGACAAGGTCACTAAAT 57.901 40.909 0.00 0.00 34.60 1.40
3717 7738 6.439675 TCACACATCAACATATGGTCAATG 57.560 37.500 7.80 9.10 0.00 2.82
3983 8021 8.840321 CGGACATCTTATTTTAAGGAACATGAT 58.160 33.333 0.00 0.00 0.00 2.45
3996 8034 7.168905 AGGAGAAAGAAACGGACATCTTATTT 58.831 34.615 0.00 0.00 34.90 1.40
4047 8102 5.722021 ACCACAATTCTTGGGTTATTCAC 57.278 39.130 7.41 0.00 38.59 3.18
4070 8133 5.997746 CAGGTGTAATAATCGGATGATTGGT 59.002 40.000 10.34 0.00 44.46 3.67
4105 8175 2.408271 TATGTGCCAAAGAGGAGCAG 57.592 50.000 0.00 0.00 41.22 4.24
4169 8239 2.049156 GCCTCGGCTGTTTTTGGC 60.049 61.111 0.00 0.00 38.26 4.52
4245 8315 2.437897 CCCTGGCTTGGAGCTTGT 59.562 61.111 0.00 0.00 41.99 3.16
4493 8563 1.067916 GGTTGTTGTTGCTGCAGGG 59.932 57.895 17.12 0.00 0.00 4.45
4555 8625 1.134159 CCTTATCAGCCTTGCTCTGCT 60.134 52.381 0.00 0.00 36.40 4.24
4592 8662 2.961531 TCCTCTTCCCTAGGATCGAG 57.038 55.000 11.48 11.72 38.24 4.04
4649 8719 6.169094 GTCTCTGTTCATCTCCTCATTTTCA 58.831 40.000 0.00 0.00 0.00 2.69
4656 8726 4.734398 ACATGTCTCTGTTCATCTCCTC 57.266 45.455 0.00 0.00 0.00 3.71
4736 8806 2.530460 TACCGGTAGCTTCCTTACCA 57.470 50.000 11.16 0.00 33.63 3.25
4766 8836 4.424711 GCGCCCATCAGTTCCCCA 62.425 66.667 0.00 0.00 0.00 4.96
4767 8837 3.936772 TTGCGCCCATCAGTTCCCC 62.937 63.158 4.18 0.00 0.00 4.81
4777 8847 2.745884 CGTCATCCTTTGCGCCCA 60.746 61.111 4.18 0.00 0.00 5.36
4797 8867 4.862902 AGTATCGTCATTCCTCCTGATG 57.137 45.455 0.00 0.00 0.00 3.07
4798 8868 5.047660 GCTAAGTATCGTCATTCCTCCTGAT 60.048 44.000 0.00 0.00 0.00 2.90
4817 8887 2.456119 CGCGGCAGTTCCAGCTAAG 61.456 63.158 0.00 0.00 33.97 2.18
4846 8916 3.524648 TTCACGAACTGTCCCGGGC 62.525 63.158 18.49 12.24 0.00 6.13
4889 8959 2.054453 GCCATGTTTCAGAGGGGCC 61.054 63.158 0.00 0.00 35.42 5.80
4922 8992 3.003394 TGGGTGATACATTGCTTGAGG 57.997 47.619 0.00 0.00 0.00 3.86
4948 9018 1.303282 CAGCACCCTTTCCTACCCC 59.697 63.158 0.00 0.00 0.00 4.95
4949 9019 1.303282 CCAGCACCCTTTCCTACCC 59.697 63.158 0.00 0.00 0.00 3.69
4951 9021 0.034089 ATGCCAGCACCCTTTCCTAC 60.034 55.000 0.00 0.00 0.00 3.18
4952 9022 0.255890 GATGCCAGCACCCTTTCCTA 59.744 55.000 0.00 0.00 0.00 2.94
4953 9023 1.000396 GATGCCAGCACCCTTTCCT 60.000 57.895 0.00 0.00 0.00 3.36
4972 9042 6.096705 TCAATGCTATTGTCACAAAATAGGGG 59.903 38.462 0.00 0.00 37.84 4.79
4987 9057 5.643777 AGAGCAACTTTACGTCAATGCTATT 59.356 36.000 9.84 1.29 43.59 1.73
4993 9063 6.258727 CCATATGAGAGCAACTTTACGTCAAT 59.741 38.462 3.65 0.00 0.00 2.57
4995 9065 5.109210 CCATATGAGAGCAACTTTACGTCA 58.891 41.667 3.65 0.00 0.00 4.35
4999 9069 5.810587 TCGAACCATATGAGAGCAACTTTAC 59.189 40.000 3.65 0.00 0.00 2.01
5065 9135 4.759205 AAAGGTGCCCCGCCATCC 62.759 66.667 0.00 0.00 36.32 3.51
5076 9146 3.003056 GGTTCGCCAGACACAAAGGTG 62.003 57.143 0.00 0.00 43.26 4.00
5077 9147 0.818040 GGTTCGCCAGACACAAAGGT 60.818 55.000 0.00 0.00 37.19 3.50
5078 9148 1.515521 GGGTTCGCCAGACACAAAGG 61.516 60.000 0.00 0.00 39.65 3.11
5079 9149 0.817634 TGGGTTCGCCAGACACAAAG 60.818 55.000 0.00 0.00 39.65 2.77
5080 9150 0.394488 TTGGGTTCGCCAGACACAAA 60.394 50.000 0.00 0.00 39.65 2.83
5081 9151 0.817634 CTTGGGTTCGCCAGACACAA 60.818 55.000 0.00 0.00 39.65 3.33
5082 9152 1.227823 CTTGGGTTCGCCAGACACA 60.228 57.895 0.00 0.00 39.65 3.72
5083 9153 1.227853 ACTTGGGTTCGCCAGACAC 60.228 57.895 0.00 0.00 39.65 3.67
5084 9154 1.070786 GACTTGGGTTCGCCAGACA 59.929 57.895 0.00 0.00 39.65 3.41
5085 9155 1.070786 TGACTTGGGTTCGCCAGAC 59.929 57.895 0.00 0.00 39.65 3.51
5086 9156 1.070786 GTGACTTGGGTTCGCCAGA 59.929 57.895 0.00 0.00 39.65 3.86
5087 9157 0.606401 ATGTGACTTGGGTTCGCCAG 60.606 55.000 0.00 0.00 39.65 4.85
5088 9158 0.888736 CATGTGACTTGGGTTCGCCA 60.889 55.000 0.00 0.00 39.65 5.69
5089 9159 0.605319 TCATGTGACTTGGGTTCGCC 60.605 55.000 0.00 0.00 0.00 5.54
5090 9160 0.798776 CTCATGTGACTTGGGTTCGC 59.201 55.000 0.00 0.00 0.00 4.70
5091 9161 2.029020 TCTCTCATGTGACTTGGGTTCG 60.029 50.000 0.00 0.00 0.00 3.95
5092 9162 3.244215 TGTCTCTCATGTGACTTGGGTTC 60.244 47.826 13.88 0.00 37.52 3.62
5093 9163 2.705658 TGTCTCTCATGTGACTTGGGTT 59.294 45.455 13.88 0.00 37.52 4.11
5094 9164 2.329267 TGTCTCTCATGTGACTTGGGT 58.671 47.619 13.88 0.00 37.52 4.51
5095 9165 3.055602 TGATGTCTCTCATGTGACTTGGG 60.056 47.826 13.88 0.00 37.52 4.12
5096 9166 3.931468 GTGATGTCTCTCATGTGACTTGG 59.069 47.826 13.88 0.00 37.52 3.61
5097 9167 4.563061 TGTGATGTCTCTCATGTGACTTG 58.437 43.478 13.88 0.00 37.52 3.16
5098 9168 4.879197 TGTGATGTCTCTCATGTGACTT 57.121 40.909 13.88 9.57 37.52 3.01
5099 9169 4.756502 CATGTGATGTCTCTCATGTGACT 58.243 43.478 13.88 4.19 43.52 3.41
5105 9175 5.130643 AGAATCCACATGTGATGTCTCTCAT 59.869 40.000 27.46 2.14 42.70 2.90
5106 9176 4.468868 AGAATCCACATGTGATGTCTCTCA 59.531 41.667 27.46 0.00 42.70 3.27
5107 9177 4.809958 CAGAATCCACATGTGATGTCTCTC 59.190 45.833 27.46 12.36 42.70 3.20
5108 9178 4.767478 CAGAATCCACATGTGATGTCTCT 58.233 43.478 27.46 16.40 42.70 3.10
5109 9179 3.311871 GCAGAATCCACATGTGATGTCTC 59.688 47.826 27.46 14.59 42.70 3.36
5110 9180 3.054582 AGCAGAATCCACATGTGATGTCT 60.055 43.478 27.46 20.26 42.70 3.41
5111 9181 3.276857 AGCAGAATCCACATGTGATGTC 58.723 45.455 27.46 18.50 42.70 3.06
5147 9217 5.784177 TCATCCACAGTTCAGTAGAGTTTC 58.216 41.667 0.00 0.00 0.00 2.78
5176 9246 3.551890 CACATAGTCTCGTTGAAATCCCG 59.448 47.826 0.00 0.00 0.00 5.14
5257 9328 6.183361 ACAGGTTACACCAAGATAGACACTTT 60.183 38.462 0.00 0.00 41.95 2.66
5258 9329 5.307196 ACAGGTTACACCAAGATAGACACTT 59.693 40.000 0.00 0.00 41.95 3.16
5286 9357 2.666098 GGCCCTTGGTAGCCGAGAA 61.666 63.158 4.05 0.00 39.87 2.87
5320 9392 0.894835 CCCGCCCTGCTTGTTTATTT 59.105 50.000 0.00 0.00 0.00 1.40
5392 9464 0.439985 CATGAGCGTCCAGAAACACG 59.560 55.000 0.00 0.00 39.09 4.49
5393 9465 1.512926 ACATGAGCGTCCAGAAACAC 58.487 50.000 0.00 0.00 0.00 3.32
5400 9472 0.036105 ATGCTGAACATGAGCGTCCA 60.036 50.000 0.00 0.00 39.47 4.02
5434 9506 4.343526 ACATGTGGTAAGCAATCCAAACAA 59.656 37.500 0.00 0.00 35.38 2.83
5440 9512 4.782019 TGAAACATGTGGTAAGCAATCC 57.218 40.909 0.00 0.00 0.00 3.01
5442 9514 6.380846 ACCATATGAAACATGTGGTAAGCAAT 59.619 34.615 24.13 5.44 40.92 3.56
5445 9517 5.356751 TGACCATATGAAACATGTGGTAAGC 59.643 40.000 24.95 16.68 42.42 3.09
5446 9518 7.067372 ACATGACCATATGAAACATGTGGTAAG 59.933 37.037 24.95 20.16 45.95 2.34
5447 9519 6.889177 ACATGACCATATGAAACATGTGGTAA 59.111 34.615 24.95 20.65 45.95 2.85
5448 9520 6.422333 ACATGACCATATGAAACATGTGGTA 58.578 36.000 24.95 16.63 45.95 3.25
5450 9522 5.840243 ACATGACCATATGAAACATGTGG 57.160 39.130 25.83 20.29 45.95 4.17
5451 9523 6.854778 TGAACATGACCATATGAAACATGTG 58.145 36.000 26.48 14.12 46.64 3.21
5453 9525 5.975344 GCTGAACATGACCATATGAAACATG 59.025 40.000 22.51 22.51 42.37 3.21
5454 9526 5.653330 TGCTGAACATGACCATATGAAACAT 59.347 36.000 3.65 4.08 0.00 2.71
5455 9527 5.008980 TGCTGAACATGACCATATGAAACA 58.991 37.500 3.65 1.76 0.00 2.83
5456 9528 5.565592 TGCTGAACATGACCATATGAAAC 57.434 39.130 3.65 0.00 0.00 2.78
5471 9543 6.486253 TCTTGAGATAACAACATGCTGAAC 57.514 37.500 2.44 0.00 0.00 3.18
5472 9544 6.880529 TGATCTTGAGATAACAACATGCTGAA 59.119 34.615 2.44 0.00 34.37 3.02
5473 9545 6.408869 TGATCTTGAGATAACAACATGCTGA 58.591 36.000 2.44 0.00 34.37 4.26
5474 9546 6.537660 TCTGATCTTGAGATAACAACATGCTG 59.462 38.462 0.00 0.00 34.37 4.41
5475 9547 6.538021 GTCTGATCTTGAGATAACAACATGCT 59.462 38.462 0.00 0.00 34.37 3.79
5476 9548 6.238320 GGTCTGATCTTGAGATAACAACATGC 60.238 42.308 0.00 0.00 34.37 4.06
5477 9549 6.820152 TGGTCTGATCTTGAGATAACAACATG 59.180 38.462 0.00 0.00 34.37 3.21
5478 9550 6.820656 GTGGTCTGATCTTGAGATAACAACAT 59.179 38.462 0.00 0.00 34.37 2.71
5479 9551 6.014242 AGTGGTCTGATCTTGAGATAACAACA 60.014 38.462 0.00 0.00 34.37 3.33
5483 9555 6.536941 GGAAAGTGGTCTGATCTTGAGATAAC 59.463 42.308 0.00 0.00 34.37 1.89
5487 9559 4.163427 AGGAAAGTGGTCTGATCTTGAGA 58.837 43.478 0.00 0.00 0.00 3.27
5518 9590 0.035056 AGCGTTCCCTCCCATTTGAG 60.035 55.000 0.00 0.00 0.00 3.02
5533 9612 0.663568 CCGTGTTCTTTCGAGAGCGT 60.664 55.000 0.00 0.00 38.98 5.07
5566 9645 4.935808 ACTCTTTCCCACATCAATTCGTAC 59.064 41.667 0.00 0.00 0.00 3.67
5605 9684 1.756538 TCTCATATCGCCTGAACTGCA 59.243 47.619 0.00 0.00 0.00 4.41
5638 9717 0.389025 CCTTGGACAGGTTTTGTGCC 59.611 55.000 0.00 0.00 46.57 5.01
5654 9733 6.697395 ACTTTTTCAACTTTAGTGCAACCTT 58.303 32.000 0.00 0.00 37.80 3.50
5665 9744 6.909909 ACGACTTCTGAACTTTTTCAACTTT 58.090 32.000 0.00 0.00 41.34 2.66
5672 9751 3.442273 TGCCAACGACTTCTGAACTTTTT 59.558 39.130 0.00 0.00 0.00 1.94
5684 9764 2.980233 GCCAAGCTGCCAACGACT 60.980 61.111 0.00 0.00 0.00 4.18
5800 9887 3.570550 TCACCGGACACCCTTTTAATTTG 59.429 43.478 9.46 0.00 0.00 2.32
5819 9906 5.163913 CGAATCAGAAGTTCATCCAACTCAC 60.164 44.000 5.50 0.00 45.32 3.51
5843 9930 2.565841 GTTGTAGCCACATCATCTCCC 58.434 52.381 0.00 0.00 33.76 4.30
5910 10002 0.671251 TTCATTGGCAAACGGTGGAC 59.329 50.000 3.01 0.00 0.00 4.02
5917 10009 3.510719 ACATATGCGTTCATTGGCAAAC 58.489 40.909 3.01 0.00 43.26 2.93
5918 10010 3.865011 ACATATGCGTTCATTGGCAAA 57.135 38.095 3.01 0.00 43.26 3.68
5920 10012 3.066064 GGTAACATATGCGTTCATTGGCA 59.934 43.478 1.58 0.00 44.29 4.92
5921 10013 3.066064 TGGTAACATATGCGTTCATTGGC 59.934 43.478 1.58 0.00 46.17 4.52
5922 10014 4.891627 TGGTAACATATGCGTTCATTGG 57.108 40.909 1.58 0.00 46.17 3.16
5937 10029 6.686630 TGTGATGGATTGAAATGTTGGTAAC 58.313 36.000 0.00 0.00 0.00 2.50
5938 10030 6.907853 TGTGATGGATTGAAATGTTGGTAA 57.092 33.333 0.00 0.00 0.00 2.85
5939 10031 6.907853 TTGTGATGGATTGAAATGTTGGTA 57.092 33.333 0.00 0.00 0.00 3.25
5941 10033 5.990386 TGTTTGTGATGGATTGAAATGTTGG 59.010 36.000 0.00 0.00 0.00 3.77
5942 10034 7.479897 TTGTTTGTGATGGATTGAAATGTTG 57.520 32.000 0.00 0.00 0.00 3.33
5943 10035 8.680039 AATTGTTTGTGATGGATTGAAATGTT 57.320 26.923 0.00 0.00 0.00 2.71
5948 10040 8.087750 GGAGTAAATTGTTTGTGATGGATTGAA 58.912 33.333 0.00 0.00 0.00 2.69
5950 10042 6.813152 GGGAGTAAATTGTTTGTGATGGATTG 59.187 38.462 0.00 0.00 0.00 2.67
5951 10043 6.725834 AGGGAGTAAATTGTTTGTGATGGATT 59.274 34.615 0.00 0.00 0.00 3.01
5952 10044 6.256053 AGGGAGTAAATTGTTTGTGATGGAT 58.744 36.000 0.00 0.00 0.00 3.41
5953 10045 5.640147 AGGGAGTAAATTGTTTGTGATGGA 58.360 37.500 0.00 0.00 0.00 3.41
5954 10046 5.105756 GGAGGGAGTAAATTGTTTGTGATGG 60.106 44.000 0.00 0.00 0.00 3.51
5955 10047 5.391950 CGGAGGGAGTAAATTGTTTGTGATG 60.392 44.000 0.00 0.00 0.00 3.07
5956 10048 4.700213 CGGAGGGAGTAAATTGTTTGTGAT 59.300 41.667 0.00 0.00 0.00 3.06
5957 10049 4.069304 CGGAGGGAGTAAATTGTTTGTGA 58.931 43.478 0.00 0.00 0.00 3.58
5958 10050 3.818773 ACGGAGGGAGTAAATTGTTTGTG 59.181 43.478 0.00 0.00 0.00 3.33
5959 10051 4.094830 ACGGAGGGAGTAAATTGTTTGT 57.905 40.909 0.00 0.00 0.00 2.83
5961 10053 3.749609 CGAACGGAGGGAGTAAATTGTTT 59.250 43.478 0.00 0.00 0.00 2.83
5963 10055 2.354403 CCGAACGGAGGGAGTAAATTGT 60.354 50.000 7.53 0.00 37.50 2.71
5964 10056 2.093869 TCCGAACGGAGGGAGTAAATTG 60.094 50.000 12.04 0.00 39.76 2.32
5965 10057 2.181975 TCCGAACGGAGGGAGTAAATT 58.818 47.619 12.04 0.00 39.76 1.82
5966 10058 1.856629 TCCGAACGGAGGGAGTAAAT 58.143 50.000 12.04 0.00 39.76 1.40
5967 10059 1.631405 TTCCGAACGGAGGGAGTAAA 58.369 50.000 15.34 0.00 46.06 2.01
5970 10062 1.856629 TAATTCCGAACGGAGGGAGT 58.143 50.000 15.34 4.12 46.06 3.85
5971 10063 3.470645 AATAATTCCGAACGGAGGGAG 57.529 47.619 15.34 0.00 46.06 4.30
5972 10064 3.054948 ACAAATAATTCCGAACGGAGGGA 60.055 43.478 15.34 2.49 46.06 4.20
5973 10065 3.275999 ACAAATAATTCCGAACGGAGGG 58.724 45.455 15.34 5.11 46.06 4.30
5974 10066 4.189231 AGACAAATAATTCCGAACGGAGG 58.811 43.478 15.34 4.52 46.06 4.30
5975 10067 4.026804 CGAGACAAATAATTCCGAACGGAG 60.027 45.833 15.34 5.60 46.06 4.63
5977 10069 3.861113 TCGAGACAAATAATTCCGAACGG 59.139 43.478 6.94 6.94 0.00 4.44
5979 10071 7.960738 TCATTTTCGAGACAAATAATTCCGAAC 59.039 33.333 0.00 0.00 34.86 3.95
5981 10073 7.603963 TCATTTTCGAGACAAATAATTCCGA 57.396 32.000 0.00 0.00 0.00 4.55
5982 10074 8.736742 CATTCATTTTCGAGACAAATAATTCCG 58.263 33.333 0.00 0.00 0.00 4.30
6021 10113 9.698309 CAGAAATGGATGTATCTAGACGTATTT 57.302 33.333 0.00 0.00 0.00 1.40
6022 10114 8.861086 ACAGAAATGGATGTATCTAGACGTATT 58.139 33.333 0.00 0.00 0.00 1.89
6023 10115 8.300286 CACAGAAATGGATGTATCTAGACGTAT 58.700 37.037 0.00 0.00 0.00 3.06
6024 10116 7.501225 TCACAGAAATGGATGTATCTAGACGTA 59.499 37.037 0.00 0.00 0.00 3.57
6026 10118 6.638873 GTCACAGAAATGGATGTATCTAGACG 59.361 42.308 0.00 0.00 0.00 4.18
6027 10119 7.492524 TGTCACAGAAATGGATGTATCTAGAC 58.507 38.462 0.00 0.00 31.82 2.59
6031 10123 6.715280 ACTTGTCACAGAAATGGATGTATCT 58.285 36.000 0.00 0.00 0.00 1.98
6032 10124 6.992063 ACTTGTCACAGAAATGGATGTATC 57.008 37.500 0.00 0.00 0.00 2.24
6033 10125 9.466497 AATTACTTGTCACAGAAATGGATGTAT 57.534 29.630 0.00 0.00 0.00 2.29
6035 10127 7.094205 GGAATTACTTGTCACAGAAATGGATGT 60.094 37.037 0.00 0.00 0.00 3.06
6037 10129 6.094048 CGGAATTACTTGTCACAGAAATGGAT 59.906 38.462 0.00 0.00 0.00 3.41
6038 10130 5.411361 CGGAATTACTTGTCACAGAAATGGA 59.589 40.000 0.00 0.00 0.00 3.41
6040 10132 6.480524 TCGGAATTACTTGTCACAGAAATG 57.519 37.500 0.00 0.00 0.00 2.32
6044 10136 3.985279 CGTTCGGAATTACTTGTCACAGA 59.015 43.478 0.00 0.00 0.00 3.41
6045 10137 3.122948 CCGTTCGGAATTACTTGTCACAG 59.877 47.826 5.19 0.00 0.00 3.66
6046 10138 3.061322 CCGTTCGGAATTACTTGTCACA 58.939 45.455 5.19 0.00 0.00 3.58
6047 10139 3.319755 TCCGTTCGGAATTACTTGTCAC 58.680 45.455 11.66 0.00 0.00 3.67
6048 10140 3.581755 CTCCGTTCGGAATTACTTGTCA 58.418 45.455 14.79 0.00 33.41 3.58
6049 10141 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
6050 10142 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
6051 10143 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
6052 10144 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
6053 10145 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
6054 10146 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
6056 10148 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
6057 10149 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
6058 10150 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
6059 10151 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
6060 10152 0.893447 AAACTACTCCCTCCGTTCGG 59.107 55.000 4.74 4.74 0.00 4.30
6062 10154 3.397849 ACAAAACTACTCCCTCCGTTC 57.602 47.619 0.00 0.00 0.00 3.95
6064 10156 4.801914 GCTTTACAAAACTACTCCCTCCGT 60.802 45.833 0.00 0.00 0.00 4.69
6065 10157 3.683340 GCTTTACAAAACTACTCCCTCCG 59.317 47.826 0.00 0.00 0.00 4.63
6066 10158 3.683340 CGCTTTACAAAACTACTCCCTCC 59.317 47.826 0.00 0.00 0.00 4.30
6067 10159 4.313282 ACGCTTTACAAAACTACTCCCTC 58.687 43.478 0.00 0.00 0.00 4.30
6068 10160 4.347360 ACGCTTTACAAAACTACTCCCT 57.653 40.909 0.00 0.00 0.00 4.20
6069 10161 5.209977 CAAACGCTTTACAAAACTACTCCC 58.790 41.667 0.00 0.00 0.00 4.30
6070 10162 4.673761 GCAAACGCTTTACAAAACTACTCC 59.326 41.667 0.00 0.00 0.00 3.85
6072 10164 4.096682 TGGCAAACGCTTTACAAAACTACT 59.903 37.500 0.00 0.00 0.00 2.57
6073 10165 4.352887 TGGCAAACGCTTTACAAAACTAC 58.647 39.130 0.00 0.00 0.00 2.73
6075 10167 3.512033 TGGCAAACGCTTTACAAAACT 57.488 38.095 0.00 0.00 0.00 2.66
6076 10168 4.268884 TCATTGGCAAACGCTTTACAAAAC 59.731 37.500 3.01 0.00 0.00 2.43
6077 10169 4.433615 TCATTGGCAAACGCTTTACAAAA 58.566 34.783 3.01 0.00 0.00 2.44
6078 10170 4.046938 TCATTGGCAAACGCTTTACAAA 57.953 36.364 3.01 0.00 0.00 2.83
6079 10171 3.717400 TCATTGGCAAACGCTTTACAA 57.283 38.095 3.01 0.00 0.00 2.41
6080 10172 3.181486 TGTTCATTGGCAAACGCTTTACA 60.181 39.130 3.01 0.00 0.00 2.41
6081 10173 3.181575 GTGTTCATTGGCAAACGCTTTAC 59.818 43.478 3.01 0.00 34.02 2.01
6082 10174 3.181486 TGTGTTCATTGGCAAACGCTTTA 60.181 39.130 3.01 0.00 36.94 1.85
6083 10175 2.200899 GTGTTCATTGGCAAACGCTTT 58.799 42.857 3.01 0.00 34.02 3.51
6084 10176 1.135915 TGTGTTCATTGGCAAACGCTT 59.864 42.857 3.01 0.00 36.94 4.68
6087 10179 2.472115 CACATGTGTTCATTGGCAAACG 59.528 45.455 18.03 0.00 31.15 3.60
6088 10180 3.456280 ACACATGTGTTCATTGGCAAAC 58.544 40.909 25.76 0.00 41.83 2.93
6089 10181 3.815856 ACACATGTGTTCATTGGCAAA 57.184 38.095 25.76 0.00 41.83 3.68
6108 10200 3.602062 CGCACGATTGAAATGTTGGTAAC 59.398 43.478 0.00 0.00 0.00 2.50
6109 10201 3.816091 CGCACGATTGAAATGTTGGTAA 58.184 40.909 0.00 0.00 0.00 2.85
6110 10202 2.413502 GCGCACGATTGAAATGTTGGTA 60.414 45.455 0.30 0.00 0.00 3.25
6111 10203 1.665735 GCGCACGATTGAAATGTTGGT 60.666 47.619 0.30 0.00 0.00 3.67
6112 10204 0.984109 GCGCACGATTGAAATGTTGG 59.016 50.000 0.30 0.00 0.00 3.77
6113 10205 0.629767 CGCGCACGATTGAAATGTTG 59.370 50.000 8.75 0.00 43.93 3.33
6114 10206 0.237235 ACGCGCACGATTGAAATGTT 59.763 45.000 5.73 0.00 43.93 2.71
6115 10207 0.237235 AACGCGCACGATTGAAATGT 59.763 45.000 5.73 0.00 43.93 2.71
6116 10208 1.831812 GTAACGCGCACGATTGAAATG 59.168 47.619 5.73 0.00 43.93 2.32
6117 10209 1.461512 TGTAACGCGCACGATTGAAAT 59.538 42.857 5.73 0.00 43.93 2.17
6118 10210 0.859882 TGTAACGCGCACGATTGAAA 59.140 45.000 5.73 0.00 43.93 2.69
6119 10211 0.859882 TTGTAACGCGCACGATTGAA 59.140 45.000 5.73 0.00 43.93 2.69
6120 10212 0.162082 GTTGTAACGCGCACGATTGA 59.838 50.000 5.73 0.00 43.93 2.57
6121 10213 0.111045 TGTTGTAACGCGCACGATTG 60.111 50.000 5.73 0.00 43.93 2.67
6122 10214 0.582482 TTGTTGTAACGCGCACGATT 59.418 45.000 5.73 0.00 43.93 3.34
6123 10215 0.111001 GTTGTTGTAACGCGCACGAT 60.111 50.000 5.73 0.00 43.93 3.73
6124 10216 1.273300 GTTGTTGTAACGCGCACGA 59.727 52.632 5.73 0.72 43.93 4.35
6126 10218 1.536149 TTTGTTGTTGTAACGCGCAC 58.464 45.000 5.73 5.03 0.00 5.34
6127 10219 2.376956 GATTTGTTGTTGTAACGCGCA 58.623 42.857 5.73 0.00 0.00 6.09
6128 10220 1.377505 CGATTTGTTGTTGTAACGCGC 59.622 47.619 5.73 0.00 0.00 6.86
6129 10221 1.377505 GCGATTTGTTGTTGTAACGCG 59.622 47.619 3.53 3.53 35.98 6.01
6130 10222 2.150424 GTGCGATTTGTTGTTGTAACGC 59.850 45.455 0.00 0.00 43.98 4.84
6131 10223 3.176867 GTGTGCGATTTGTTGTTGTAACG 59.823 43.478 0.00 0.00 0.00 3.18
6132 10224 4.028026 GTGTGTGCGATTTGTTGTTGTAAC 60.028 41.667 0.00 0.00 0.00 2.50
6133 10225 4.099120 GTGTGTGCGATTTGTTGTTGTAA 58.901 39.130 0.00 0.00 0.00 2.41
6134 10226 3.127030 TGTGTGTGCGATTTGTTGTTGTA 59.873 39.130 0.00 0.00 0.00 2.41
6135 10227 2.095008 TGTGTGTGCGATTTGTTGTTGT 60.095 40.909 0.00 0.00 0.00 3.32
6136 10228 2.524034 TGTGTGTGCGATTTGTTGTTG 58.476 42.857 0.00 0.00 0.00 3.33
6137 10229 2.796304 CTGTGTGTGCGATTTGTTGTT 58.204 42.857 0.00 0.00 0.00 2.83
6138 10230 1.533756 GCTGTGTGTGCGATTTGTTGT 60.534 47.619 0.00 0.00 0.00 3.32
6139 10231 1.122849 GCTGTGTGTGCGATTTGTTG 58.877 50.000 0.00 0.00 0.00 3.33
6140 10232 3.549997 GCTGTGTGTGCGATTTGTT 57.450 47.368 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.