Multiple sequence alignment - TraesCS1A01G370100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G370100 chr1A 100.000 6002 0 0 1 6002 547396833 547390832 0.000000e+00 11084.0
1 TraesCS1A01G370100 chr1A 93.327 1124 47 13 3534 4641 547414010 547412899 0.000000e+00 1635.0
2 TraesCS1A01G370100 chr1A 83.904 789 74 26 500 1273 547417887 547417137 0.000000e+00 704.0
3 TraesCS1A01G370100 chr1A 91.211 512 33 3 4666 5177 547411124 547410625 0.000000e+00 686.0
4 TraesCS1A01G370100 chr1A 89.655 203 16 3 3229 3427 558465600 558465801 2.780000e-63 254.0
5 TraesCS1A01G370100 chr1A 84.034 119 17 2 5597 5715 155857822 155857706 4.920000e-21 113.0
6 TraesCS1A01G370100 chr1A 86.667 75 10 0 5878 5952 532629254 532629180 3.850000e-12 84.2
7 TraesCS1A01G370100 chr1D 93.906 1805 76 9 3525 5302 452626902 452625105 0.000000e+00 2693.0
8 TraesCS1A01G370100 chr1D 89.095 1348 72 37 328 1641 452628228 452626922 0.000000e+00 1605.0
9 TraesCS1A01G370100 chr1D 95.266 845 23 1 2584 3428 366230131 366230958 0.000000e+00 1323.0
10 TraesCS1A01G370100 chr1D 90.311 289 16 3 54 332 452636865 452636579 9.500000e-98 368.0
11 TraesCS1A01G370100 chr1D 84.768 302 13 5 5352 5624 452625105 452624808 7.670000e-69 272.0
12 TraesCS1A01G370100 chr1D 95.620 137 3 2 5654 5789 452624411 452624277 3.640000e-52 217.0
13 TraesCS1A01G370100 chr1D 92.000 150 4 3 1627 1775 366229892 366230034 2.840000e-48 204.0
14 TraesCS1A01G370100 chr1D 97.222 108 3 0 1746 1853 366230038 366230145 3.690000e-42 183.0
15 TraesCS1A01G370100 chr1D 97.436 78 2 0 5788 5865 452624152 452624075 3.770000e-27 134.0
16 TraesCS1A01G370100 chr1D 82.353 102 16 2 5871 5971 13368761 13368661 2.980000e-13 87.9
17 TraesCS1A01G370100 chr1D 100.000 36 0 0 2919 2954 134631429 134631464 3.880000e-07 67.6
18 TraesCS1A01G370100 chr1B 89.552 1340 69 25 4311 5610 622707335 622706027 0.000000e+00 1633.0
19 TraesCS1A01G370100 chr1B 93.018 931 43 8 3428 4357 622708244 622707335 0.000000e+00 1339.0
20 TraesCS1A01G370100 chr1B 83.954 1047 72 46 643 1643 622709231 622708235 0.000000e+00 915.0
21 TraesCS1A01G370100 chr1B 93.939 198 9 2 5593 5789 622706002 622705807 4.550000e-76 296.0
22 TraesCS1A01G370100 chr1B 92.746 193 13 1 5805 5997 622705668 622705477 1.650000e-70 278.0
23 TraesCS1A01G370100 chr1B 88.000 75 9 0 5878 5952 588327351 588327277 8.290000e-14 89.8
24 TraesCS1A01G370100 chr1B 87.324 71 9 0 5872 5942 588296725 588296795 1.390000e-11 82.4
25 TraesCS1A01G370100 chr4B 83.555 1733 172 55 3526 5216 115847029 115845368 0.000000e+00 1517.0
26 TraesCS1A01G370100 chr4B 80.617 908 124 30 3561 4443 115880795 115879915 0.000000e+00 654.0
27 TraesCS1A01G370100 chr4B 82.700 474 50 19 827 1279 115848189 115847727 5.640000e-105 392.0
28 TraesCS1A01G370100 chr4B 98.611 144 2 0 1125 1268 115881536 115881393 7.720000e-64 255.0
29 TraesCS1A01G370100 chr4B 84.727 275 14 5 2272 2546 22225367 22225613 3.590000e-62 250.0
30 TraesCS1A01G370100 chr4B 87.330 221 23 3 3218 3434 630087658 630087439 1.290000e-61 248.0
31 TraesCS1A01G370100 chr4B 83.708 178 19 4 1668 1836 637984304 637984128 6.230000e-35 159.0
32 TraesCS1A01G370100 chr4B 83.444 151 11 8 1668 1805 630088762 630088613 1.760000e-25 128.0
33 TraesCS1A01G370100 chr4B 79.688 192 17 9 1446 1633 115847569 115847396 1.060000e-22 119.0
34 TraesCS1A01G370100 chr4B 100.000 36 0 0 2919 2954 16529137 16529172 3.880000e-07 67.6
35 TraesCS1A01G370100 chr5B 83.599 1317 134 33 3778 5063 608202829 608204094 0.000000e+00 1160.0
36 TraesCS1A01G370100 chr5B 94.490 726 38 1 1855 2580 443267799 443268522 0.000000e+00 1118.0
37 TraesCS1A01G370100 chr5B 94.353 726 39 1 1855 2580 666200998 666201721 0.000000e+00 1112.0
38 TraesCS1A01G370100 chr5B 94.102 729 40 2 1855 2583 377631099 377630374 0.000000e+00 1105.0
39 TraesCS1A01G370100 chr5B 84.666 763 90 16 3526 4287 608343329 608344065 0.000000e+00 736.0
40 TraesCS1A01G370100 chr5B 84.909 497 46 13 4568 5063 608344126 608344594 5.440000e-130 475.0
41 TraesCS1A01G370100 chr5B 89.785 186 13 4 1093 1272 608088749 608088934 3.620000e-57 233.0
42 TraesCS1A01G370100 chr5B 78.345 411 38 24 994 1372 608340649 608341040 1.010000e-52 219.0
43 TraesCS1A01G370100 chr5B 83.607 122 17 3 5597 5718 403708694 403708576 1.770000e-20 111.0
44 TraesCS1A01G370100 chr4A 85.069 1152 117 33 3526 4666 491916595 491915488 0.000000e+00 1123.0
45 TraesCS1A01G370100 chr4A 84.463 708 86 15 3587 4288 492031608 492030919 0.000000e+00 676.0
46 TraesCS1A01G370100 chr4A 92.138 318 25 0 4687 5004 491915428 491915111 3.300000e-122 449.0
47 TraesCS1A01G370100 chr4A 83.678 484 38 23 827 1277 491917814 491917339 9.300000e-113 418.0
48 TraesCS1A01G370100 chr4A 92.388 289 22 0 4718 5006 492030485 492030197 4.330000e-111 412.0
49 TraesCS1A01G370100 chr4A 87.907 215 22 3 3218 3429 718481218 718481431 3.590000e-62 250.0
50 TraesCS1A01G370100 chr4A 82.812 192 19 9 1446 1633 491917177 491916996 6.230000e-35 159.0
51 TraesCS1A01G370100 chr4A 91.071 56 4 1 5162 5216 491915064 491915009 2.320000e-09 75.0
52 TraesCS1A01G370100 chr4A 100.000 37 0 0 2918 2954 736950907 736950943 1.080000e-07 69.4
53 TraesCS1A01G370100 chr7B 94.490 726 38 1 1855 2580 637862892 637862169 0.000000e+00 1118.0
54 TraesCS1A01G370100 chr7B 94.490 726 38 1 1855 2580 698235489 698234766 0.000000e+00 1118.0
55 TraesCS1A01G370100 chr6A 94.077 726 41 1 1855 2580 522270008 522269285 0.000000e+00 1101.0
56 TraesCS1A01G370100 chr6A 87.850 214 23 1 3218 3428 172348470 172348257 1.290000e-61 248.0
57 TraesCS1A01G370100 chr2A 93.802 726 43 1 1855 2580 24905975 24906698 0.000000e+00 1090.0
58 TraesCS1A01G370100 chr2A 88.263 213 21 2 3218 3427 335688308 335688519 9.990000e-63 252.0
59 TraesCS1A01G370100 chr2A 89.394 66 4 3 1667 1730 753742122 753742186 4.990000e-11 80.5
60 TraesCS1A01G370100 chr2B 94.004 567 31 2 2014 2580 10620025 10619462 0.000000e+00 856.0
61 TraesCS1A01G370100 chr2B 84.916 179 16 6 1670 1838 678565895 678565718 2.880000e-38 171.0
62 TraesCS1A01G370100 chr2B 84.874 119 15 1 5597 5715 175630196 175630311 3.800000e-22 117.0
63 TraesCS1A01G370100 chr2B 84.553 123 13 4 5597 5718 306886174 306886057 3.800000e-22 117.0
64 TraesCS1A01G370100 chr4D 85.069 864 68 28 4175 5005 81972568 81971733 0.000000e+00 824.0
65 TraesCS1A01G370100 chr4D 84.082 735 89 17 3561 4288 81986417 81985704 0.000000e+00 684.0
66 TraesCS1A01G370100 chr4D 87.291 598 55 8 3526 4121 81973313 81972735 0.000000e+00 664.0
67 TraesCS1A01G370100 chr4D 84.490 490 29 25 827 1279 81974484 81974005 1.990000e-119 440.0
68 TraesCS1A01G370100 chr4D 98.611 144 2 0 1125 1268 81987316 81987173 7.720000e-64 255.0
69 TraesCS1A01G370100 chr4D 85.870 184 12 8 1668 1838 490421040 490420858 3.690000e-42 183.0
70 TraesCS1A01G370100 chr4D 100.000 37 0 0 1000 1036 81921721 81921685 1.080000e-07 69.4
71 TraesCS1A01G370100 chr4D 91.837 49 4 0 1001 1049 81987448 81987400 1.080000e-07 69.4
72 TraesCS1A01G370100 chr4D 100.000 36 0 0 2919 2954 444891518 444891483 3.880000e-07 67.6
73 TraesCS1A01G370100 chr5D 81.873 993 94 36 4112 5063 493121964 493122911 0.000000e+00 758.0
74 TraesCS1A01G370100 chr5D 87.782 532 51 6 3526 4057 493121440 493121957 1.430000e-170 610.0
75 TraesCS1A01G370100 chr5D 88.732 213 20 2 3218 3427 106986871 106986660 2.150000e-64 257.0
76 TraesCS1A01G370100 chr5D 84.874 119 15 1 5597 5715 164604884 164604999 3.800000e-22 117.0
77 TraesCS1A01G370100 chr5A 86.654 532 56 9 3526 4057 616070088 616070604 5.220000e-160 575.0
78 TraesCS1A01G370100 chr5A 81.343 402 46 16 4111 4499 616070610 616070995 3.520000e-77 300.0
79 TraesCS1A01G370100 chr5A 95.862 145 6 0 1124 1268 397249879 397250023 1.010000e-57 235.0
80 TraesCS1A01G370100 chr5A 94.595 74 4 0 4498 4571 616071021 616071094 1.370000e-21 115.0
81 TraesCS1A01G370100 chr3A 90.798 326 28 2 2596 2921 125481799 125481476 9.240000e-118 435.0
82 TraesCS1A01G370100 chr3A 91.632 239 19 1 2676 2914 652576917 652576680 4.480000e-86 329.0
83 TraesCS1A01G370100 chr3A 91.632 239 19 1 2676 2914 652665099 652664862 4.480000e-86 329.0
84 TraesCS1A01G370100 chr3A 91.632 239 18 1 2676 2914 652711462 652711226 4.480000e-86 329.0
85 TraesCS1A01G370100 chr3A 93.204 103 7 0 1751 1853 125483147 125483045 1.040000e-32 152.0
86 TraesCS1A01G370100 chr3A 89.076 119 3 5 1668 1778 125483300 125483184 8.110000e-29 139.0
87 TraesCS1A01G370100 chr2D 88.043 276 29 4 2647 2921 190097140 190096868 2.090000e-84 324.0
88 TraesCS1A01G370100 chr2D 86.331 278 36 2 2645 2921 593213126 593212850 9.780000e-78 302.0
89 TraesCS1A01G370100 chr2D 87.097 124 13 1 5597 5720 122864148 122864268 2.920000e-28 137.0
90 TraesCS1A01G370100 chr2D 85.915 71 7 1 1668 1738 343099579 343099646 8.340000e-09 73.1
91 TraesCS1A01G370100 chr2D 100.000 37 0 0 2919 2955 190097105 190097141 1.080000e-07 69.4
92 TraesCS1A01G370100 chr2D 100.000 36 0 0 2919 2954 513966132 513966167 3.880000e-07 67.6
93 TraesCS1A01G370100 chrUn 87.273 275 34 1 2647 2921 241691384 241691657 4.520000e-81 313.0
94 TraesCS1A01G370100 chr6B 87.226 274 31 4 2650 2921 48490837 48490566 5.840000e-80 309.0
95 TraesCS1A01G370100 chr6B 83.333 204 14 14 1668 1853 553419756 553419957 2.880000e-38 171.0
96 TraesCS1A01G370100 chr3B 88.073 218 21 3 3218 3432 747750593 747750808 2.780000e-63 254.0
97 TraesCS1A01G370100 chr3B 100.000 36 0 0 2545 2580 547129087 547129052 3.880000e-07 67.6
98 TraesCS1A01G370100 chr7A 88.208 212 21 2 3220 3428 519102565 519102775 3.590000e-62 250.0
99 TraesCS1A01G370100 chr7A 79.592 196 18 11 1641 1824 461018710 461018895 2.940000e-23 121.0
100 TraesCS1A01G370100 chr6D 85.950 121 15 2 5597 5717 408903138 408903020 1.760000e-25 128.0
101 TraesCS1A01G370100 chr6D 100.000 36 0 0 2919 2954 39069964 39069929 3.880000e-07 67.6
102 TraesCS1A01G370100 chr3D 91.139 79 6 1 5512 5589 49039984 49039906 8.230000e-19 106.0
103 TraesCS1A01G370100 chr3D 85.915 71 5 4 1668 1735 67013013 67012945 3.000000e-08 71.3
104 TraesCS1A01G370100 chr7D 97.436 39 0 1 2919 2957 396445624 396445661 1.400000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G370100 chr1A 547390832 547396833 6001 True 11084.000000 11084 100.000000 1 6002 1 chr1A.!!$R3 6001
1 TraesCS1A01G370100 chr1A 547410625 547417887 7262 True 1008.333333 1635 89.480667 500 5177 3 chr1A.!!$R4 4677
2 TraesCS1A01G370100 chr1D 452624075 452628228 4153 True 984.200000 2693 92.165000 328 5865 5 chr1D.!!$R3 5537
3 TraesCS1A01G370100 chr1D 366229892 366230958 1066 False 570.000000 1323 94.829333 1627 3428 3 chr1D.!!$F2 1801
4 TraesCS1A01G370100 chr1B 622705477 622709231 3754 True 892.200000 1633 90.641800 643 5997 5 chr1B.!!$R2 5354
5 TraesCS1A01G370100 chr4B 115845368 115848189 2821 True 676.000000 1517 81.981000 827 5216 3 chr4B.!!$R2 4389
6 TraesCS1A01G370100 chr4B 115879915 115881536 1621 True 454.500000 654 89.614000 1125 4443 2 chr4B.!!$R3 3318
7 TraesCS1A01G370100 chr5B 608202829 608204094 1265 False 1160.000000 1160 83.599000 3778 5063 1 chr5B.!!$F3 1285
8 TraesCS1A01G370100 chr5B 443267799 443268522 723 False 1118.000000 1118 94.490000 1855 2580 1 chr5B.!!$F1 725
9 TraesCS1A01G370100 chr5B 666200998 666201721 723 False 1112.000000 1112 94.353000 1855 2580 1 chr5B.!!$F4 725
10 TraesCS1A01G370100 chr5B 377630374 377631099 725 True 1105.000000 1105 94.102000 1855 2583 1 chr5B.!!$R1 728
11 TraesCS1A01G370100 chr5B 608340649 608344594 3945 False 476.666667 736 82.640000 994 5063 3 chr5B.!!$F5 4069
12 TraesCS1A01G370100 chr4A 492030197 492031608 1411 True 544.000000 676 88.425500 3587 5006 2 chr4A.!!$R2 1419
13 TraesCS1A01G370100 chr4A 491915009 491917814 2805 True 444.800000 1123 86.953600 827 5216 5 chr4A.!!$R1 4389
14 TraesCS1A01G370100 chr7B 637862169 637862892 723 True 1118.000000 1118 94.490000 1855 2580 1 chr7B.!!$R1 725
15 TraesCS1A01G370100 chr7B 698234766 698235489 723 True 1118.000000 1118 94.490000 1855 2580 1 chr7B.!!$R2 725
16 TraesCS1A01G370100 chr6A 522269285 522270008 723 True 1101.000000 1101 94.077000 1855 2580 1 chr6A.!!$R2 725
17 TraesCS1A01G370100 chr2A 24905975 24906698 723 False 1090.000000 1090 93.802000 1855 2580 1 chr2A.!!$F1 725
18 TraesCS1A01G370100 chr2B 10619462 10620025 563 True 856.000000 856 94.004000 2014 2580 1 chr2B.!!$R1 566
19 TraesCS1A01G370100 chr4D 81971733 81974484 2751 True 642.666667 824 85.616667 827 5005 3 chr4D.!!$R4 4178
20 TraesCS1A01G370100 chr4D 81985704 81987448 1744 True 336.133333 684 91.510000 1001 4288 3 chr4D.!!$R5 3287
21 TraesCS1A01G370100 chr5D 493121440 493122911 1471 False 684.000000 758 84.827500 3526 5063 2 chr5D.!!$F2 1537
22 TraesCS1A01G370100 chr5A 616070088 616071094 1006 False 330.000000 575 87.530667 3526 4571 3 chr5A.!!$F2 1045
23 TraesCS1A01G370100 chr3A 125481476 125483300 1824 True 242.000000 435 91.026000 1668 2921 3 chr3A.!!$R4 1253

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
977 1001 0.033228 CCAGCGACAGAGATCCATCC 59.967 60.0 0.00 0.0 0.00 3.51 F
2085 5394 0.817634 TTTGTTGGACACCTCCTGCG 60.818 55.0 0.00 0.0 37.48 5.18 F
2463 5772 0.809385 ACGCTCACGCTCTAGCTAAA 59.191 50.0 0.00 0.0 45.53 1.85 F
3178 7421 0.037326 CTAGAGGGCAGCGACAACAA 60.037 55.0 0.00 0.0 0.00 2.83 F
3248 7491 0.255890 GCCATTGCCTGGGTCTTCTA 59.744 55.0 4.72 0.0 46.06 2.10 F
3422 7665 0.392595 ATTTCTTTCCGTCCTCCGCC 60.393 55.0 0.00 0.0 34.38 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2224 5533 0.040067 GCTTGTGCTTCGAGGGTTTG 60.040 55.000 0.00 0.0 36.03 2.93 R
3159 7402 0.037326 TTGTTGTCGCTGCCCTCTAG 60.037 55.000 0.00 0.0 0.00 2.43 R
3931 10512 0.098200 CAATGGCATGTGACGAGCTG 59.902 55.000 0.00 0.0 0.00 4.24 R
4577 11426 0.532862 ATTCGAAGGCGGCGATCATT 60.533 50.000 12.98 0.0 37.64 2.57 R
4673 13274 6.811170 CAGTCTAAACTCTTCTAAAGCAGAGG 59.189 42.308 10.70 0.0 39.28 3.69 R
5325 13996 0.110373 GCCGTCGAAAGCAAATCGTT 60.110 50.000 3.17 0.0 40.99 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.888093 GCGGAAGGCGATACATACT 57.112 52.632 0.00 0.00 0.00 2.12
20 21 2.593257 GCGGAAGGCGATACATACTAC 58.407 52.381 0.00 0.00 0.00 2.73
21 22 2.228343 GCGGAAGGCGATACATACTACT 59.772 50.000 0.00 0.00 0.00 2.57
22 23 3.670091 GCGGAAGGCGATACATACTACTC 60.670 52.174 0.00 0.00 0.00 2.59
23 24 3.119919 CGGAAGGCGATACATACTACTCC 60.120 52.174 0.00 0.00 0.00 3.85
24 25 3.825014 GGAAGGCGATACATACTACTCCA 59.175 47.826 0.00 0.00 0.00 3.86
25 26 4.463186 GGAAGGCGATACATACTACTCCAT 59.537 45.833 0.00 0.00 0.00 3.41
26 27 5.047235 GGAAGGCGATACATACTACTCCATT 60.047 44.000 0.00 0.00 0.00 3.16
27 28 6.420913 AAGGCGATACATACTACTCCATTT 57.579 37.500 0.00 0.00 0.00 2.32
28 29 6.026947 AGGCGATACATACTACTCCATTTC 57.973 41.667 0.00 0.00 0.00 2.17
29 30 4.857588 GGCGATACATACTACTCCATTTCG 59.142 45.833 0.00 0.00 0.00 3.46
30 31 5.335426 GGCGATACATACTACTCCATTTCGA 60.335 44.000 0.00 0.00 0.00 3.71
31 32 6.323266 GCGATACATACTACTCCATTTCGAT 58.677 40.000 0.00 0.00 0.00 3.59
32 33 6.807230 GCGATACATACTACTCCATTTCGATT 59.193 38.462 0.00 0.00 0.00 3.34
33 34 7.008447 GCGATACATACTACTCCATTTCGATTC 59.992 40.741 0.00 0.00 0.00 2.52
34 35 7.485277 CGATACATACTACTCCATTTCGATTCC 59.515 40.741 0.00 0.00 0.00 3.01
35 36 5.855045 ACATACTACTCCATTTCGATTCCC 58.145 41.667 0.00 0.00 0.00 3.97
36 37 5.602978 ACATACTACTCCATTTCGATTCCCT 59.397 40.000 0.00 0.00 0.00 4.20
37 38 6.781014 ACATACTACTCCATTTCGATTCCCTA 59.219 38.462 0.00 0.00 0.00 3.53
38 39 7.289317 ACATACTACTCCATTTCGATTCCCTAA 59.711 37.037 0.00 0.00 0.00 2.69
39 40 6.555463 ACTACTCCATTTCGATTCCCTAAA 57.445 37.500 0.00 0.00 0.00 1.85
40 41 6.954232 ACTACTCCATTTCGATTCCCTAAAA 58.046 36.000 0.00 0.00 0.00 1.52
41 42 7.399634 ACTACTCCATTTCGATTCCCTAAAAA 58.600 34.615 0.00 0.00 0.00 1.94
64 65 6.575162 AAAAACTAGTCCATTTCGCTGAAT 57.425 33.333 0.00 0.00 0.00 2.57
65 66 6.575162 AAAACTAGTCCATTTCGCTGAATT 57.425 33.333 0.00 0.00 0.00 2.17
66 67 6.575162 AAACTAGTCCATTTCGCTGAATTT 57.425 33.333 0.00 0.00 0.00 1.82
67 68 6.575162 AACTAGTCCATTTCGCTGAATTTT 57.425 33.333 0.00 0.00 0.00 1.82
68 69 5.942872 ACTAGTCCATTTCGCTGAATTTTG 58.057 37.500 0.00 0.00 0.00 2.44
69 70 4.853924 AGTCCATTTCGCTGAATTTTGT 57.146 36.364 0.00 0.00 0.00 2.83
70 71 5.957842 AGTCCATTTCGCTGAATTTTGTA 57.042 34.783 0.00 0.00 0.00 2.41
71 72 5.699839 AGTCCATTTCGCTGAATTTTGTAC 58.300 37.500 0.00 0.00 0.00 2.90
72 73 5.473504 AGTCCATTTCGCTGAATTTTGTACT 59.526 36.000 0.00 0.00 0.00 2.73
73 74 6.016276 AGTCCATTTCGCTGAATTTTGTACTT 60.016 34.615 0.00 0.00 0.00 2.24
74 75 6.088085 GTCCATTTCGCTGAATTTTGTACTTG 59.912 38.462 0.00 0.00 0.00 3.16
75 76 5.920273 CCATTTCGCTGAATTTTGTACTTGT 59.080 36.000 0.00 0.00 0.00 3.16
76 77 6.129115 CCATTTCGCTGAATTTTGTACTTGTG 60.129 38.462 0.00 0.00 0.00 3.33
77 78 3.884169 TCGCTGAATTTTGTACTTGTGC 58.116 40.909 0.00 0.00 0.00 4.57
78 79 2.979813 CGCTGAATTTTGTACTTGTGCC 59.020 45.455 0.00 0.00 0.00 5.01
79 80 2.979813 GCTGAATTTTGTACTTGTGCCG 59.020 45.455 0.00 0.00 0.00 5.69
80 81 2.979813 CTGAATTTTGTACTTGTGCCGC 59.020 45.455 0.00 0.00 0.00 6.53
81 82 2.621055 TGAATTTTGTACTTGTGCCGCT 59.379 40.909 0.00 0.00 0.00 5.52
82 83 2.704725 ATTTTGTACTTGTGCCGCTG 57.295 45.000 0.00 0.00 0.00 5.18
83 84 0.665835 TTTTGTACTTGTGCCGCTGG 59.334 50.000 0.00 0.00 0.00 4.85
84 85 1.169661 TTTGTACTTGTGCCGCTGGG 61.170 55.000 0.00 0.00 0.00 4.45
94 95 3.699894 CCGCTGGGCTGAGACAGT 61.700 66.667 6.49 0.00 37.07 3.55
95 96 2.125753 CGCTGGGCTGAGACAGTC 60.126 66.667 6.49 0.00 37.07 3.51
96 97 2.935740 CGCTGGGCTGAGACAGTCA 61.936 63.158 2.66 2.31 37.90 3.41
97 98 1.372683 GCTGGGCTGAGACAGTCAA 59.627 57.895 2.66 0.00 37.90 3.18
98 99 0.952984 GCTGGGCTGAGACAGTCAAC 60.953 60.000 2.66 0.00 37.90 3.18
99 100 0.683973 CTGGGCTGAGACAGTCAACT 59.316 55.000 2.66 0.00 37.90 3.16
100 101 1.071385 CTGGGCTGAGACAGTCAACTT 59.929 52.381 2.66 0.00 37.90 2.66
101 102 1.490490 TGGGCTGAGACAGTCAACTTT 59.510 47.619 2.66 0.00 37.90 2.66
102 103 2.703536 TGGGCTGAGACAGTCAACTTTA 59.296 45.455 2.66 0.00 37.90 1.85
103 104 3.327757 TGGGCTGAGACAGTCAACTTTAT 59.672 43.478 2.66 0.00 37.90 1.40
104 105 3.686726 GGGCTGAGACAGTCAACTTTATG 59.313 47.826 2.66 0.00 37.90 1.90
105 106 4.319177 GGCTGAGACAGTCAACTTTATGT 58.681 43.478 2.66 0.00 35.96 2.29
106 107 4.153117 GGCTGAGACAGTCAACTTTATGTG 59.847 45.833 2.66 0.00 35.96 3.21
107 108 4.377841 GCTGAGACAGTCAACTTTATGTGC 60.378 45.833 2.66 0.00 33.60 4.57
108 109 4.960938 TGAGACAGTCAACTTTATGTGCT 58.039 39.130 2.66 0.00 29.64 4.40
109 110 4.751600 TGAGACAGTCAACTTTATGTGCTG 59.248 41.667 2.66 0.00 33.77 4.41
110 111 4.960938 AGACAGTCAACTTTATGTGCTGA 58.039 39.130 2.66 0.00 32.76 4.26
111 112 4.993584 AGACAGTCAACTTTATGTGCTGAG 59.006 41.667 2.66 0.00 32.76 3.35
112 113 4.067896 ACAGTCAACTTTATGTGCTGAGG 58.932 43.478 0.00 0.00 32.76 3.86
113 114 4.067896 CAGTCAACTTTATGTGCTGAGGT 58.932 43.478 0.00 0.00 31.29 3.85
114 115 4.153117 CAGTCAACTTTATGTGCTGAGGTC 59.847 45.833 0.00 0.00 31.29 3.85
115 116 4.065088 GTCAACTTTATGTGCTGAGGTCA 58.935 43.478 0.00 0.00 0.00 4.02
116 117 4.515191 GTCAACTTTATGTGCTGAGGTCAA 59.485 41.667 0.00 0.00 0.00 3.18
117 118 5.008613 GTCAACTTTATGTGCTGAGGTCAAA 59.991 40.000 0.00 0.00 0.00 2.69
118 119 5.769662 TCAACTTTATGTGCTGAGGTCAAAT 59.230 36.000 0.00 0.00 0.00 2.32
119 120 6.939730 TCAACTTTATGTGCTGAGGTCAAATA 59.060 34.615 0.00 0.00 0.00 1.40
120 121 7.446931 TCAACTTTATGTGCTGAGGTCAAATAA 59.553 33.333 0.00 0.00 0.00 1.40
121 122 7.759489 ACTTTATGTGCTGAGGTCAAATAAA 57.241 32.000 0.00 0.00 34.34 1.40
122 123 8.353423 ACTTTATGTGCTGAGGTCAAATAAAT 57.647 30.769 0.00 0.00 34.75 1.40
123 124 8.806146 ACTTTATGTGCTGAGGTCAAATAAATT 58.194 29.630 0.00 0.00 34.75 1.82
124 125 9.643693 CTTTATGTGCTGAGGTCAAATAAATTT 57.356 29.630 0.00 0.00 34.75 1.82
125 126 9.995003 TTTATGTGCTGAGGTCAAATAAATTTT 57.005 25.926 0.00 0.00 31.93 1.82
126 127 9.995003 TTATGTGCTGAGGTCAAATAAATTTTT 57.005 25.926 0.00 0.00 0.00 1.94
152 153 9.715121 TTATTACTTCCTACCTAACAGTGTTTG 57.285 33.333 14.90 12.21 0.00 2.93
153 154 4.386711 ACTTCCTACCTAACAGTGTTTGC 58.613 43.478 14.90 0.00 0.00 3.68
154 155 4.102681 ACTTCCTACCTAACAGTGTTTGCT 59.897 41.667 14.90 2.05 0.00 3.91
155 156 4.002906 TCCTACCTAACAGTGTTTGCTG 57.997 45.455 14.90 3.17 41.92 4.41
156 157 3.644265 TCCTACCTAACAGTGTTTGCTGA 59.356 43.478 14.90 3.55 39.62 4.26
157 158 4.101898 TCCTACCTAACAGTGTTTGCTGAA 59.898 41.667 14.90 0.00 39.62 3.02
158 159 4.452455 CCTACCTAACAGTGTTTGCTGAAG 59.548 45.833 14.90 4.02 39.62 3.02
159 160 3.886123 ACCTAACAGTGTTTGCTGAAGT 58.114 40.909 14.90 2.37 39.62 3.01
160 161 4.270008 ACCTAACAGTGTTTGCTGAAGTT 58.730 39.130 14.90 0.00 39.62 2.66
161 162 5.433526 ACCTAACAGTGTTTGCTGAAGTTA 58.566 37.500 14.90 0.00 39.62 2.24
162 163 5.296035 ACCTAACAGTGTTTGCTGAAGTTAC 59.704 40.000 14.90 0.00 39.62 2.50
163 164 3.944422 ACAGTGTTTGCTGAAGTTACG 57.056 42.857 0.00 0.00 39.62 3.18
164 165 3.527533 ACAGTGTTTGCTGAAGTTACGA 58.472 40.909 0.00 0.00 39.62 3.43
165 166 3.936453 ACAGTGTTTGCTGAAGTTACGAA 59.064 39.130 0.00 0.00 39.62 3.85
166 167 4.574828 ACAGTGTTTGCTGAAGTTACGAAT 59.425 37.500 0.00 0.00 39.62 3.34
167 168 5.065988 ACAGTGTTTGCTGAAGTTACGAATT 59.934 36.000 0.00 0.00 39.62 2.17
168 169 6.259167 ACAGTGTTTGCTGAAGTTACGAATTA 59.741 34.615 0.00 0.00 39.62 1.40
169 170 6.573725 CAGTGTTTGCTGAAGTTACGAATTAC 59.426 38.462 0.00 0.00 38.70 1.89
170 171 8.494589 CAGTGTTTGCTGAAGTTACGAATTACG 61.495 40.741 0.00 0.00 42.18 3.18
171 172 5.462729 TGTTTGCTGAAGTTACGAATTACGA 59.537 36.000 0.00 0.00 45.77 3.43
172 173 6.146510 TGTTTGCTGAAGTTACGAATTACGAT 59.853 34.615 0.00 0.00 45.77 3.73
173 174 5.944049 TGCTGAAGTTACGAATTACGATC 57.056 39.130 0.00 0.00 45.77 3.69
174 175 4.497966 TGCTGAAGTTACGAATTACGATCG 59.502 41.667 14.88 14.88 45.77 3.69
175 176 4.085721 GCTGAAGTTACGAATTACGATCGG 60.086 45.833 20.98 2.40 44.32 4.18
176 177 3.792956 TGAAGTTACGAATTACGATCGGC 59.207 43.478 20.98 2.27 44.32 5.54
177 178 2.735823 AGTTACGAATTACGATCGGCC 58.264 47.619 20.98 0.00 44.32 6.13
178 179 2.360165 AGTTACGAATTACGATCGGCCT 59.640 45.455 20.98 0.30 44.32 5.19
179 180 3.118542 GTTACGAATTACGATCGGCCTT 58.881 45.455 20.98 8.97 44.32 4.35
180 181 2.304751 ACGAATTACGATCGGCCTTT 57.695 45.000 20.98 7.29 44.32 3.11
181 182 2.624636 ACGAATTACGATCGGCCTTTT 58.375 42.857 20.98 5.46 44.32 2.27
182 183 2.606272 ACGAATTACGATCGGCCTTTTC 59.394 45.455 20.98 12.92 44.32 2.29
183 184 2.605818 CGAATTACGATCGGCCTTTTCA 59.394 45.455 20.98 0.00 45.77 2.69
184 185 3.062909 CGAATTACGATCGGCCTTTTCAA 59.937 43.478 20.98 0.62 45.77 2.69
185 186 4.340263 GAATTACGATCGGCCTTTTCAAC 58.660 43.478 20.98 0.00 0.00 3.18
186 187 2.754946 TACGATCGGCCTTTTCAACT 57.245 45.000 20.98 0.00 0.00 3.16
187 188 1.156736 ACGATCGGCCTTTTCAACTG 58.843 50.000 20.98 0.00 0.00 3.16
188 189 1.270625 ACGATCGGCCTTTTCAACTGA 60.271 47.619 20.98 0.00 0.00 3.41
189 190 1.394917 CGATCGGCCTTTTCAACTGAG 59.605 52.381 7.38 0.00 0.00 3.35
190 191 1.131315 GATCGGCCTTTTCAACTGAGC 59.869 52.381 0.00 0.00 0.00 4.26
191 192 0.108585 TCGGCCTTTTCAACTGAGCT 59.891 50.000 0.00 0.00 0.00 4.09
192 193 0.954452 CGGCCTTTTCAACTGAGCTT 59.046 50.000 0.00 0.00 0.00 3.74
193 194 1.068954 CGGCCTTTTCAACTGAGCTTC 60.069 52.381 0.00 0.00 0.00 3.86
194 195 1.068954 GGCCTTTTCAACTGAGCTTCG 60.069 52.381 0.00 0.00 0.00 3.79
195 196 1.604278 GCCTTTTCAACTGAGCTTCGT 59.396 47.619 0.00 0.00 0.00 3.85
196 197 2.349912 GCCTTTTCAACTGAGCTTCGTC 60.350 50.000 0.00 0.00 0.00 4.20
197 198 2.224314 CCTTTTCAACTGAGCTTCGTCC 59.776 50.000 0.00 0.00 0.00 4.79
198 199 1.497991 TTTCAACTGAGCTTCGTCCG 58.502 50.000 0.00 0.00 0.00 4.79
199 200 0.319555 TTCAACTGAGCTTCGTCCGG 60.320 55.000 0.00 0.00 0.00 5.14
200 201 2.048127 AACTGAGCTTCGTCCGGC 60.048 61.111 0.00 0.00 0.00 6.13
201 202 2.867855 AACTGAGCTTCGTCCGGCA 61.868 57.895 0.00 0.00 0.00 5.69
202 203 2.507992 CTGAGCTTCGTCCGGCAG 60.508 66.667 0.00 0.00 0.00 4.85
203 204 3.288308 CTGAGCTTCGTCCGGCAGT 62.288 63.158 0.00 0.00 0.00 4.40
204 205 2.811317 GAGCTTCGTCCGGCAGTG 60.811 66.667 0.00 0.00 0.00 3.66
222 223 4.033894 CCTAATCGGCGCTTCAGG 57.966 61.111 7.64 3.45 0.00 3.86
223 224 2.247437 CCTAATCGGCGCTTCAGGC 61.247 63.158 7.64 0.00 37.64 4.85
232 233 4.225497 GCTTCAGGCGCCATTACT 57.775 55.556 31.54 3.61 0.00 2.24
233 234 3.379650 GCTTCAGGCGCCATTACTA 57.620 52.632 31.54 6.36 0.00 1.82
234 235 1.663695 GCTTCAGGCGCCATTACTAA 58.336 50.000 31.54 11.71 0.00 2.24
235 236 2.014128 GCTTCAGGCGCCATTACTAAA 58.986 47.619 31.54 10.27 0.00 1.85
236 237 2.223272 GCTTCAGGCGCCATTACTAAAC 60.223 50.000 31.54 4.54 0.00 2.01
237 238 2.032680 TCAGGCGCCATTACTAAACC 57.967 50.000 31.54 0.00 0.00 3.27
238 239 1.557832 TCAGGCGCCATTACTAAACCT 59.442 47.619 31.54 0.00 0.00 3.50
239 240 1.670811 CAGGCGCCATTACTAAACCTG 59.329 52.381 31.54 9.57 37.47 4.00
240 241 0.380733 GGCGCCATTACTAAACCTGC 59.619 55.000 24.80 0.00 0.00 4.85
241 242 0.380733 GCGCCATTACTAAACCTGCC 59.619 55.000 0.00 0.00 0.00 4.85
242 243 0.655733 CGCCATTACTAAACCTGCCG 59.344 55.000 0.00 0.00 0.00 5.69
243 244 0.380733 GCCATTACTAAACCTGCCGC 59.619 55.000 0.00 0.00 0.00 6.53
244 245 2.017113 GCCATTACTAAACCTGCCGCT 61.017 52.381 0.00 0.00 0.00 5.52
245 246 2.365582 CCATTACTAAACCTGCCGCTT 58.634 47.619 0.00 0.00 0.00 4.68
246 247 2.097466 CCATTACTAAACCTGCCGCTTG 59.903 50.000 0.00 0.00 0.00 4.01
247 248 1.161843 TTACTAAACCTGCCGCTTGC 58.838 50.000 0.00 0.00 41.77 4.01
248 249 1.017177 TACTAAACCTGCCGCTTGCG 61.017 55.000 8.14 8.14 45.60 4.85
249 250 2.281208 TAAACCTGCCGCTTGCGT 60.281 55.556 13.97 0.00 45.60 5.24
250 251 2.513065 CTAAACCTGCCGCTTGCGTG 62.513 60.000 13.97 6.68 45.60 5.34
266 267 3.854856 TGGACTGGCCAAACAAGC 58.145 55.556 7.01 0.00 45.87 4.01
267 268 2.192861 TGGACTGGCCAAACAAGCG 61.193 57.895 7.01 0.00 45.87 4.68
268 269 2.050077 GACTGGCCAAACAAGCGC 60.050 61.111 7.01 0.00 0.00 5.92
269 270 2.832661 ACTGGCCAAACAAGCGCA 60.833 55.556 11.47 0.00 0.00 6.09
270 271 2.355009 CTGGCCAAACAAGCGCAC 60.355 61.111 11.47 0.00 0.00 5.34
271 272 4.263209 TGGCCAAACAAGCGCACG 62.263 61.111 11.47 1.39 0.00 5.34
272 273 4.999939 GGCCAAACAAGCGCACGG 63.000 66.667 11.47 0.00 0.00 4.94
273 274 3.959975 GCCAAACAAGCGCACGGA 61.960 61.111 11.47 0.00 0.00 4.69
274 275 2.953821 CCAAACAAGCGCACGGAT 59.046 55.556 11.47 0.00 0.00 4.18
275 276 1.442520 CCAAACAAGCGCACGGATG 60.443 57.895 11.47 2.53 0.00 3.51
276 277 1.573932 CAAACAAGCGCACGGATGA 59.426 52.632 11.47 0.00 0.00 2.92
277 278 0.725784 CAAACAAGCGCACGGATGAC 60.726 55.000 11.47 0.00 0.00 3.06
278 279 0.884704 AAACAAGCGCACGGATGACT 60.885 50.000 11.47 0.00 0.00 3.41
279 280 1.291877 AACAAGCGCACGGATGACTC 61.292 55.000 11.47 0.00 0.00 3.36
280 281 2.507102 AAGCGCACGGATGACTCG 60.507 61.111 11.47 0.00 0.00 4.18
283 284 2.951745 CGCACGGATGACTCGCTC 60.952 66.667 0.00 0.00 0.00 5.03
284 285 2.181777 GCACGGATGACTCGCTCA 59.818 61.111 0.00 0.00 0.00 4.26
285 286 2.161486 GCACGGATGACTCGCTCAC 61.161 63.158 0.00 0.00 0.00 3.51
286 287 1.869574 CACGGATGACTCGCTCACG 60.870 63.158 0.00 0.00 42.01 4.35
287 288 2.951745 CGGATGACTCGCTCACGC 60.952 66.667 0.00 0.00 39.84 5.34
288 289 2.181777 GGATGACTCGCTCACGCA 59.818 61.111 0.00 0.00 39.84 5.24
289 290 1.227089 GGATGACTCGCTCACGCAT 60.227 57.895 0.00 0.00 39.84 4.73
290 291 1.485838 GGATGACTCGCTCACGCATG 61.486 60.000 0.00 0.00 39.84 4.06
291 292 2.087095 GATGACTCGCTCACGCATGC 62.087 60.000 7.91 7.91 39.84 4.06
292 293 2.810887 GACTCGCTCACGCATGCA 60.811 61.111 19.57 0.00 39.84 3.96
293 294 2.357396 ACTCGCTCACGCATGCAA 60.357 55.556 19.57 1.03 39.84 4.08
294 295 2.097160 CTCGCTCACGCATGCAAC 59.903 61.111 19.57 0.30 39.84 4.17
295 296 3.372676 CTCGCTCACGCATGCAACC 62.373 63.158 19.57 0.00 39.84 3.77
296 297 4.799473 CGCTCACGCATGCAACCG 62.799 66.667 19.57 8.54 35.30 4.44
297 298 3.422303 GCTCACGCATGCAACCGA 61.422 61.111 19.57 6.82 35.78 4.69
298 299 2.753966 GCTCACGCATGCAACCGAT 61.754 57.895 19.57 0.00 35.78 4.18
299 300 1.796151 CTCACGCATGCAACCGATT 59.204 52.632 19.57 0.00 0.00 3.34
300 301 0.168788 CTCACGCATGCAACCGATTT 59.831 50.000 19.57 0.00 0.00 2.17
301 302 0.167908 TCACGCATGCAACCGATTTC 59.832 50.000 19.57 0.00 0.00 2.17
302 303 1.127571 CACGCATGCAACCGATTTCG 61.128 55.000 19.57 0.00 39.44 3.46
303 304 1.134487 CGCATGCAACCGATTTCGT 59.866 52.632 19.57 0.00 37.74 3.85
304 305 0.454285 CGCATGCAACCGATTTCGTT 60.454 50.000 19.57 0.00 37.74 3.85
305 306 1.259316 GCATGCAACCGATTTCGTTC 58.741 50.000 14.21 0.00 37.74 3.95
306 307 1.400888 GCATGCAACCGATTTCGTTCA 60.401 47.619 14.21 0.00 37.74 3.18
307 308 2.731968 GCATGCAACCGATTTCGTTCAT 60.732 45.455 14.21 0.00 37.74 2.57
308 309 3.500982 CATGCAACCGATTTCGTTCATT 58.499 40.909 0.00 0.00 37.74 2.57
309 310 3.196007 TGCAACCGATTTCGTTCATTC 57.804 42.857 0.00 0.00 37.74 2.67
310 311 2.166007 GCAACCGATTTCGTTCATTCG 58.834 47.619 0.00 0.00 37.74 3.34
311 312 2.166007 CAACCGATTTCGTTCATTCGC 58.834 47.619 0.00 0.00 37.74 4.70
312 313 0.725117 ACCGATTTCGTTCATTCGCC 59.275 50.000 0.00 0.00 37.74 5.54
313 314 0.315059 CCGATTTCGTTCATTCGCCG 60.315 55.000 0.00 0.00 37.74 6.46
314 315 0.368907 CGATTTCGTTCATTCGCCGT 59.631 50.000 0.00 0.00 34.11 5.68
315 316 1.201877 CGATTTCGTTCATTCGCCGTT 60.202 47.619 0.00 0.00 34.11 4.44
316 317 2.723618 CGATTTCGTTCATTCGCCGTTT 60.724 45.455 0.00 0.00 34.11 3.60
317 318 2.759538 TTTCGTTCATTCGCCGTTTT 57.240 40.000 0.00 0.00 0.00 2.43
318 319 2.759538 TTCGTTCATTCGCCGTTTTT 57.240 40.000 0.00 0.00 0.00 1.94
369 370 7.176589 TCAACTTTTGACCAATTTAACCAGT 57.823 32.000 0.00 0.00 34.08 4.00
378 379 6.098982 TGACCAATTTAACCAGTTTGACCATT 59.901 34.615 0.00 0.00 0.00 3.16
388 389 6.569780 ACCAGTTTGACCATTGACTTAAAAC 58.430 36.000 0.00 0.00 0.00 2.43
483 485 6.084925 AGTTAACGAGTACGAAGAATGTCTG 58.915 40.000 0.00 0.00 42.66 3.51
496 498 7.591426 ACGAAGAATGTCTGCAGATTTTAAAAC 59.409 33.333 21.47 5.27 0.00 2.43
578 580 1.025113 TCGTGGACCGTTGCAAAACA 61.025 50.000 0.00 0.00 37.94 2.83
700 705 1.481871 TACTCTTTCCCAGCTACCGG 58.518 55.000 0.00 0.00 0.00 5.28
701 706 0.544595 ACTCTTTCCCAGCTACCGGT 60.545 55.000 13.98 13.98 0.00 5.28
702 707 0.613777 CTCTTTCCCAGCTACCGGTT 59.386 55.000 15.04 0.00 0.00 4.44
703 708 0.323629 TCTTTCCCAGCTACCGGTTG 59.676 55.000 15.04 13.30 0.00 3.77
704 709 0.323629 CTTTCCCAGCTACCGGTTGA 59.676 55.000 20.66 0.00 0.00 3.18
705 710 0.035739 TTTCCCAGCTACCGGTTGAC 59.964 55.000 20.66 10.88 0.00 3.18
706 711 1.833787 TTCCCAGCTACCGGTTGACC 61.834 60.000 20.66 2.80 0.00 4.02
707 712 2.291043 CCCAGCTACCGGTTGACCT 61.291 63.158 20.66 5.28 0.00 3.85
708 713 1.079127 CCAGCTACCGGTTGACCTG 60.079 63.158 20.66 16.65 0.00 4.00
709 714 1.671742 CAGCTACCGGTTGACCTGT 59.328 57.895 20.66 2.79 37.27 4.00
710 715 0.892755 CAGCTACCGGTTGACCTGTA 59.107 55.000 20.66 4.68 35.10 2.74
782 794 2.035832 CCAATTTTGAAACCAGCGGACT 59.964 45.455 1.50 0.00 0.00 3.85
837 857 1.378646 CCGCCTTCTTCTTTCCCCC 60.379 63.158 0.00 0.00 0.00 5.40
929 950 2.047179 GCCTTCGTCCCTCACCAC 60.047 66.667 0.00 0.00 0.00 4.16
951 975 4.036262 ACAATCTAGCAACGAACTGCAAAA 59.964 37.500 10.58 0.00 45.18 2.44
958 982 2.475200 ACGAACTGCAAAAGCAGAAC 57.525 45.000 22.73 14.17 39.96 3.01
977 1001 0.033228 CCAGCGACAGAGATCCATCC 59.967 60.000 0.00 0.00 0.00 3.51
1115 1207 2.352960 GGAGATCTGAATTGTGCGGTTC 59.647 50.000 0.00 0.00 0.00 3.62
1272 1368 0.919710 GGGAAGCCAAGGTATCCACT 59.080 55.000 12.35 0.00 33.48 4.00
1280 1379 6.018433 AGCCAAGGTATCCACTCAAATAAT 57.982 37.500 0.00 0.00 0.00 1.28
1328 1427 6.459923 TGTGTTTTCCTATTGGGTAAATTGC 58.540 36.000 0.00 0.00 36.87 3.56
1329 1428 6.042093 TGTGTTTTCCTATTGGGTAAATTGCA 59.958 34.615 0.00 0.00 36.87 4.08
1330 1429 6.589907 GTGTTTTCCTATTGGGTAAATTGCAG 59.410 38.462 0.00 0.00 36.87 4.41
1350 1462 3.211865 AGTGATGCATCAGTGGCTAATG 58.788 45.455 31.49 0.00 38.93 1.90
1359 1473 6.152492 TGCATCAGTGGCTAATGAAATTTGTA 59.848 34.615 3.81 0.00 37.87 2.41
1393 1511 2.392662 TGGATTTGTGCAGGGTCAAAA 58.607 42.857 4.54 0.00 37.16 2.44
1394 1512 2.102252 TGGATTTGTGCAGGGTCAAAAC 59.898 45.455 4.54 2.55 37.16 2.43
1395 1513 2.365293 GGATTTGTGCAGGGTCAAAACT 59.635 45.455 4.54 0.00 37.16 2.66
1396 1514 2.957491 TTTGTGCAGGGTCAAAACTG 57.043 45.000 0.00 0.00 37.76 3.16
1402 1520 1.691196 CAGGGTCAAAACTGCTTGGA 58.309 50.000 0.00 0.00 0.00 3.53
1404 1522 2.629617 CAGGGTCAAAACTGCTTGGATT 59.370 45.455 0.00 0.00 0.00 3.01
1405 1523 3.070015 CAGGGTCAAAACTGCTTGGATTT 59.930 43.478 0.00 0.00 0.00 2.17
1406 1524 3.070015 AGGGTCAAAACTGCTTGGATTTG 59.930 43.478 0.00 0.00 34.81 2.32
1407 1525 3.181466 GGGTCAAAACTGCTTGGATTTGT 60.181 43.478 0.00 0.00 35.01 2.83
1408 1526 4.038642 GGGTCAAAACTGCTTGGATTTGTA 59.961 41.667 0.00 0.00 35.01 2.41
1409 1527 5.452636 GGGTCAAAACTGCTTGGATTTGTAA 60.453 40.000 0.00 0.00 35.01 2.41
1410 1528 6.223120 GGTCAAAACTGCTTGGATTTGTAAT 58.777 36.000 0.00 0.00 35.01 1.89
1411 1529 6.146021 GGTCAAAACTGCTTGGATTTGTAATG 59.854 38.462 0.00 0.00 35.01 1.90
1412 1530 6.922957 GTCAAAACTGCTTGGATTTGTAATGA 59.077 34.615 0.00 0.00 35.01 2.57
1414 1532 7.599621 TCAAAACTGCTTGGATTTGTAATGATG 59.400 33.333 0.00 0.00 35.01 3.07
1428 4409 4.473196 TGTAATGATGAAGCTGGAGGGTAA 59.527 41.667 0.00 0.00 0.00 2.85
1454 4451 2.358898 GCATCCTCTCTGTCTCTGTCTC 59.641 54.545 0.00 0.00 0.00 3.36
1456 4453 3.348647 TCCTCTCTGTCTCTGTCTCTG 57.651 52.381 0.00 0.00 0.00 3.35
1457 4454 2.642311 TCCTCTCTGTCTCTGTCTCTGT 59.358 50.000 0.00 0.00 0.00 3.41
1458 4455 3.009723 CCTCTCTGTCTCTGTCTCTGTC 58.990 54.545 0.00 0.00 0.00 3.51
1459 4456 3.307691 CCTCTCTGTCTCTGTCTCTGTCT 60.308 52.174 0.00 0.00 0.00 3.41
1578 4794 8.927411 TGATCTCTGTCAATGGTATTAGATTCA 58.073 33.333 0.00 0.00 0.00 2.57
1579 4795 9.941325 GATCTCTGTCAATGGTATTAGATTCAT 57.059 33.333 0.00 0.00 0.00 2.57
1826 5114 1.373497 GAATCGATCGAGCGCCCAT 60.373 57.895 23.84 3.75 0.00 4.00
1853 5141 1.945354 GCAGATGAACCGGTCGAGGA 61.945 60.000 8.04 0.00 34.73 3.71
1876 5164 1.478105 GCAGAAATTTGGAGCCGGAAT 59.522 47.619 5.05 0.00 0.00 3.01
1923 5232 2.736531 GCAGTTTGGTGGGCAAGG 59.263 61.111 0.00 0.00 0.00 3.61
1936 5245 1.524482 GCAAGGAGAAGGGCGATCT 59.476 57.895 0.00 0.00 0.00 2.75
1965 5274 2.489722 GGAATTTCAAGCTCCACTGTCC 59.510 50.000 0.00 0.00 0.00 4.02
2022 5331 7.960793 ACGTAGTAGATGCACAAATAAGAAAC 58.039 34.615 0.00 0.00 41.94 2.78
2070 5379 1.499007 ACCCCTGTTCCATCAGTTTGT 59.501 47.619 0.00 0.00 34.02 2.83
2085 5394 0.817634 TTTGTTGGACACCTCCTGCG 60.818 55.000 0.00 0.00 37.48 5.18
2132 5441 6.575254 GCCGATGGTGGATTATCTAAAGATCT 60.575 42.308 0.00 0.00 36.05 2.75
2178 5487 2.625823 CCGCAACGACCAAGGCATT 61.626 57.895 0.00 0.00 0.00 3.56
2224 5533 3.204526 CAAGCTGGAATGACTGATCCTC 58.795 50.000 0.00 0.00 36.64 3.71
2227 5536 3.265221 AGCTGGAATGACTGATCCTCAAA 59.735 43.478 0.00 0.00 36.64 2.69
2242 5551 1.532868 CTCAAACCCTCGAAGCACAAG 59.467 52.381 0.00 0.00 0.00 3.16
2373 5682 4.063689 CAGCTTATGGTGCTATCCTGAAG 58.936 47.826 0.00 0.00 38.92 3.02
2441 5750 2.256174 CGAACGGCGAGAGTCAAATAA 58.744 47.619 16.62 0.00 44.57 1.40
2463 5772 0.809385 ACGCTCACGCTCTAGCTAAA 59.191 50.000 0.00 0.00 45.53 1.85
2464 5773 1.405821 ACGCTCACGCTCTAGCTAAAT 59.594 47.619 0.00 0.00 45.53 1.40
2472 5781 6.687604 TCACGCTCTAGCTAAATATATGCAA 58.312 36.000 0.00 0.00 39.32 4.08
2636 6879 1.623311 ACACATGACCCAATCGAGACA 59.377 47.619 0.00 0.00 0.00 3.41
2659 6902 3.254657 CACACACACGGGAAAATACCAAT 59.745 43.478 0.00 0.00 0.00 3.16
2662 6905 3.892588 ACACACGGGAAAATACCAATTGT 59.107 39.130 4.43 0.00 0.00 2.71
2922 7165 8.267620 TCGATTCTCAATTTTCATTTAGAGCA 57.732 30.769 0.00 0.00 0.00 4.26
2923 7166 8.177663 TCGATTCTCAATTTTCATTTAGAGCAC 58.822 33.333 0.00 0.00 0.00 4.40
2924 7167 7.430502 CGATTCTCAATTTTCATTTAGAGCACC 59.569 37.037 0.00 0.00 0.00 5.01
2925 7168 6.515272 TCTCAATTTTCATTTAGAGCACCC 57.485 37.500 0.00 0.00 0.00 4.61
2926 7169 5.418840 TCTCAATTTTCATTTAGAGCACCCC 59.581 40.000 0.00 0.00 0.00 4.95
2927 7170 5.083122 TCAATTTTCATTTAGAGCACCCCA 58.917 37.500 0.00 0.00 0.00 4.96
2928 7171 5.541868 TCAATTTTCATTTAGAGCACCCCAA 59.458 36.000 0.00 0.00 0.00 4.12
2929 7172 5.665916 ATTTTCATTTAGAGCACCCCAAG 57.334 39.130 0.00 0.00 0.00 3.61
2930 7173 2.806945 TCATTTAGAGCACCCCAAGG 57.193 50.000 0.00 0.00 40.04 3.61
2931 7174 2.274542 TCATTTAGAGCACCCCAAGGA 58.725 47.619 0.00 0.00 36.73 3.36
2932 7175 2.852449 TCATTTAGAGCACCCCAAGGAT 59.148 45.455 0.00 0.00 36.73 3.24
2933 7176 2.806945 TTTAGAGCACCCCAAGGATG 57.193 50.000 0.00 0.00 36.73 3.51
2997 7240 0.974383 ACCACTTCTTACTCCACCCG 59.026 55.000 0.00 0.00 0.00 5.28
3175 7418 3.298958 CCTAGAGGGCAGCGACAA 58.701 61.111 0.00 0.00 0.00 3.18
3176 7419 1.153549 CCTAGAGGGCAGCGACAAC 60.154 63.158 0.00 0.00 0.00 3.32
3177 7420 1.591703 CTAGAGGGCAGCGACAACA 59.408 57.895 0.00 0.00 0.00 3.33
3178 7421 0.037326 CTAGAGGGCAGCGACAACAA 60.037 55.000 0.00 0.00 0.00 2.83
3179 7422 0.320421 TAGAGGGCAGCGACAACAAC 60.320 55.000 0.00 0.00 0.00 3.32
3180 7423 2.954753 GAGGGCAGCGACAACAACG 61.955 63.158 0.00 0.00 0.00 4.10
3187 7430 4.531708 CGACAACAACGCCATTGG 57.468 55.556 0.00 0.00 43.20 3.16
3188 7431 1.729131 CGACAACAACGCCATTGGC 60.729 57.895 18.10 18.10 46.75 4.52
3204 7447 4.792804 GCAGCTCCAGCCAGGACC 62.793 72.222 0.00 0.00 43.07 4.46
3205 7448 3.007920 CAGCTCCAGCCAGGACCT 61.008 66.667 0.00 0.00 43.07 3.85
3206 7449 1.687146 CAGCTCCAGCCAGGACCTA 60.687 63.158 0.00 0.00 43.07 3.08
3207 7450 1.382420 AGCTCCAGCCAGGACCTAG 60.382 63.158 0.00 0.00 43.07 3.02
3208 7451 2.439104 GCTCCAGCCAGGACCTAGG 61.439 68.421 7.41 7.41 43.07 3.02
3214 7457 2.123425 CCAGGACCTAGGCGCCTA 60.123 66.667 33.24 33.24 0.00 3.93
3215 7458 2.203771 CCAGGACCTAGGCGCCTAG 61.204 68.421 43.78 43.78 44.07 3.02
3216 7459 2.522193 AGGACCTAGGCGCCTAGC 60.522 66.667 44.85 34.66 43.35 3.42
3228 7471 2.444140 CCTAGCGGGTAGGGCACT 60.444 66.667 22.66 0.00 44.54 4.40
3229 7472 2.797278 CCTAGCGGGTAGGGCACTG 61.797 68.421 22.66 0.00 44.54 3.66
3230 7473 3.447025 CTAGCGGGTAGGGCACTGC 62.447 68.421 0.00 0.00 0.00 4.40
3241 7484 3.766691 GCACTGCCATTGCCTGGG 61.767 66.667 0.00 0.00 46.06 4.45
3242 7485 2.283388 CACTGCCATTGCCTGGGT 60.283 61.111 4.72 0.00 46.06 4.51
3243 7486 2.036256 ACTGCCATTGCCTGGGTC 59.964 61.111 4.72 0.00 46.06 4.46
3244 7487 2.357836 CTGCCATTGCCTGGGTCT 59.642 61.111 4.72 0.00 46.06 3.85
3245 7488 1.304713 CTGCCATTGCCTGGGTCTT 60.305 57.895 4.72 0.00 46.06 3.01
3246 7489 1.304381 TGCCATTGCCTGGGTCTTC 60.304 57.895 4.72 0.00 46.06 2.87
3247 7490 1.000396 GCCATTGCCTGGGTCTTCT 60.000 57.895 4.72 0.00 46.06 2.85
3248 7491 0.255890 GCCATTGCCTGGGTCTTCTA 59.744 55.000 4.72 0.00 46.06 2.10
3249 7492 1.748591 GCCATTGCCTGGGTCTTCTAG 60.749 57.143 4.72 0.00 46.06 2.43
3250 7493 1.673168 CATTGCCTGGGTCTTCTAGC 58.327 55.000 0.00 0.00 0.00 3.42
3251 7494 0.548510 ATTGCCTGGGTCTTCTAGCC 59.451 55.000 0.00 0.00 46.67 3.93
3259 7502 2.924421 GGGTCTTCTAGCCATTGGAAG 58.076 52.381 6.95 2.95 45.71 3.46
3260 7503 2.505819 GGGTCTTCTAGCCATTGGAAGA 59.494 50.000 6.95 5.49 45.71 2.87
3261 7504 3.137360 GGGTCTTCTAGCCATTGGAAGAT 59.863 47.826 6.95 0.00 44.40 2.40
3262 7505 4.385754 GGGTCTTCTAGCCATTGGAAGATT 60.386 45.833 6.95 0.00 44.40 2.40
3263 7506 4.819088 GGTCTTCTAGCCATTGGAAGATTC 59.181 45.833 6.95 0.71 44.40 2.52
3264 7507 5.431765 GTCTTCTAGCCATTGGAAGATTCA 58.568 41.667 6.95 0.00 44.40 2.57
3265 7508 6.060788 GTCTTCTAGCCATTGGAAGATTCAT 58.939 40.000 6.95 0.00 44.40 2.57
3266 7509 6.545298 GTCTTCTAGCCATTGGAAGATTCATT 59.455 38.462 6.95 0.00 44.40 2.57
3267 7510 7.716998 GTCTTCTAGCCATTGGAAGATTCATTA 59.283 37.037 6.95 0.00 44.40 1.90
3268 7511 8.443176 TCTTCTAGCCATTGGAAGATTCATTAT 58.557 33.333 6.95 0.00 39.99 1.28
3269 7512 8.627208 TTCTAGCCATTGGAAGATTCATTATC 57.373 34.615 6.95 0.00 0.00 1.75
3270 7513 7.748677 TCTAGCCATTGGAAGATTCATTATCA 58.251 34.615 6.95 0.00 35.59 2.15
3271 7514 8.219868 TCTAGCCATTGGAAGATTCATTATCAA 58.780 33.333 6.95 0.00 35.59 2.57
3272 7515 7.850935 AGCCATTGGAAGATTCATTATCAAT 57.149 32.000 6.95 0.00 35.59 2.57
3273 7516 8.945195 AGCCATTGGAAGATTCATTATCAATA 57.055 30.769 6.95 0.00 35.59 1.90
3274 7517 9.543231 AGCCATTGGAAGATTCATTATCAATAT 57.457 29.630 6.95 0.00 35.59 1.28
3275 7518 9.582431 GCCATTGGAAGATTCATTATCAATATG 57.418 33.333 6.95 0.00 35.59 1.78
3300 7543 9.589111 TGTTTTAGGTTGTTTTCCTATTGAAAC 57.411 29.630 0.00 0.00 42.56 2.78
3301 7544 9.589111 GTTTTAGGTTGTTTTCCTATTGAAACA 57.411 29.630 10.37 0.00 42.56 2.83
3303 7546 9.757227 TTTAGGTTGTTTTCCTATTGAAACATG 57.243 29.630 2.92 0.00 42.56 3.21
3304 7547 6.223120 AGGTTGTTTTCCTATTGAAACATGC 58.777 36.000 0.00 0.80 42.56 4.06
3305 7548 5.408299 GGTTGTTTTCCTATTGAAACATGCC 59.592 40.000 0.00 5.35 42.56 4.40
3306 7549 6.223120 GTTGTTTTCCTATTGAAACATGCCT 58.777 36.000 0.00 0.00 42.56 4.75
3307 7550 7.375053 GTTGTTTTCCTATTGAAACATGCCTA 58.625 34.615 0.00 0.00 42.56 3.93
3308 7551 6.919721 TGTTTTCCTATTGAAACATGCCTAC 58.080 36.000 0.00 0.00 42.56 3.18
3309 7552 6.491745 TGTTTTCCTATTGAAACATGCCTACA 59.508 34.615 0.00 0.00 42.56 2.74
3310 7553 7.178274 TGTTTTCCTATTGAAACATGCCTACAT 59.822 33.333 0.00 0.00 42.56 2.29
3311 7554 7.716799 TTTCCTATTGAAACATGCCTACATT 57.283 32.000 0.00 0.00 38.04 2.71
3312 7555 7.716799 TTCCTATTGAAACATGCCTACATTT 57.283 32.000 0.00 0.00 32.87 2.32
3313 7556 7.716799 TCCTATTGAAACATGCCTACATTTT 57.283 32.000 0.00 0.00 32.87 1.82
3314 7557 8.133024 TCCTATTGAAACATGCCTACATTTTT 57.867 30.769 0.00 0.00 38.55 1.94
3315 7558 9.249053 TCCTATTGAAACATGCCTACATTTTTA 57.751 29.630 0.00 0.00 36.53 1.52
3319 7562 9.723601 ATTGAAACATGCCTACATTTTTATTGT 57.276 25.926 0.00 0.00 36.53 2.71
3349 7592 4.884458 TTTTTGCTGTAATGTGTGTCGA 57.116 36.364 0.00 0.00 0.00 4.20
3350 7593 3.870723 TTTGCTGTAATGTGTGTCGAC 57.129 42.857 9.11 9.11 0.00 4.20
3351 7594 2.812358 TGCTGTAATGTGTGTCGACT 57.188 45.000 17.92 0.00 0.00 4.18
3352 7595 2.672714 TGCTGTAATGTGTGTCGACTC 58.327 47.619 17.92 14.12 0.00 3.36
3353 7596 2.296190 TGCTGTAATGTGTGTCGACTCT 59.704 45.455 17.92 0.00 0.00 3.24
3354 7597 3.243737 TGCTGTAATGTGTGTCGACTCTT 60.244 43.478 17.92 6.48 0.00 2.85
3355 7598 3.741344 GCTGTAATGTGTGTCGACTCTTT 59.259 43.478 17.92 12.87 0.00 2.52
3356 7599 4.143305 GCTGTAATGTGTGTCGACTCTTTC 60.143 45.833 17.92 8.70 0.00 2.62
3371 7614 6.608435 GACTCTTTCGATTTGCATCAAAAG 57.392 37.500 0.00 0.00 35.49 2.27
3372 7615 6.317789 ACTCTTTCGATTTGCATCAAAAGA 57.682 33.333 3.96 3.96 39.26 2.52
3373 7616 6.738114 ACTCTTTCGATTTGCATCAAAAGAA 58.262 32.000 5.26 8.43 40.44 2.52
3374 7617 7.373493 ACTCTTTCGATTTGCATCAAAAGAAT 58.627 30.769 5.26 0.00 40.44 2.40
3375 7618 7.869429 ACTCTTTCGATTTGCATCAAAAGAATT 59.131 29.630 5.26 0.00 40.44 2.17
3376 7619 8.231304 TCTTTCGATTTGCATCAAAAGAATTC 57.769 30.769 1.75 0.00 38.82 2.17
3377 7620 8.084073 TCTTTCGATTTGCATCAAAAGAATTCT 58.916 29.630 0.88 0.88 38.82 2.40
3378 7621 8.592105 TTTCGATTTGCATCAAAAGAATTCTT 57.408 26.923 15.11 15.11 36.90 2.52
3380 7623 8.231304 TCGATTTGCATCAAAAGAATTCTTTC 57.769 30.769 28.87 18.24 44.69 2.62
3381 7624 7.329226 TCGATTTGCATCAAAAGAATTCTTTCC 59.671 33.333 28.87 16.77 44.69 3.13
3382 7625 7.330208 CGATTTGCATCAAAAGAATTCTTTCCT 59.670 33.333 28.87 15.08 44.69 3.36
3383 7626 8.913487 ATTTGCATCAAAAGAATTCTTTCCTT 57.087 26.923 28.87 14.42 44.69 3.36
3385 7628 9.829507 TTTGCATCAAAAGAATTCTTTCCTTAA 57.170 25.926 28.87 17.64 44.69 1.85
3386 7629 9.480053 TTGCATCAAAAGAATTCTTTCCTTAAG 57.520 29.630 28.87 18.56 44.69 1.85
3387 7630 8.859090 TGCATCAAAAGAATTCTTTCCTTAAGA 58.141 29.630 28.87 19.83 44.69 2.10
3388 7631 9.133627 GCATCAAAAGAATTCTTTCCTTAAGAC 57.866 33.333 28.87 13.18 44.69 3.01
3393 7636 9.534565 AAAAGAATTCTTTCCTTAAGACTTTGC 57.465 29.630 28.87 0.00 44.69 3.68
3394 7637 7.220741 AGAATTCTTTCCTTAAGACTTTGCC 57.779 36.000 0.88 0.00 42.50 4.52
3395 7638 6.777580 AGAATTCTTTCCTTAAGACTTTGCCA 59.222 34.615 0.88 0.00 42.50 4.92
3396 7639 6.581171 ATTCTTTCCTTAAGACTTTGCCAG 57.419 37.500 3.36 0.00 42.50 4.85
3397 7640 5.304686 TCTTTCCTTAAGACTTTGCCAGA 57.695 39.130 3.36 0.00 37.96 3.86
3398 7641 5.063880 TCTTTCCTTAAGACTTTGCCAGAC 58.936 41.667 3.36 0.00 37.96 3.51
3399 7642 3.418684 TCCTTAAGACTTTGCCAGACC 57.581 47.619 3.36 0.00 0.00 3.85
3400 7643 2.979678 TCCTTAAGACTTTGCCAGACCT 59.020 45.455 3.36 0.00 0.00 3.85
3401 7644 3.394606 TCCTTAAGACTTTGCCAGACCTT 59.605 43.478 3.36 0.00 0.00 3.50
3402 7645 4.595781 TCCTTAAGACTTTGCCAGACCTTA 59.404 41.667 3.36 0.00 0.00 2.69
3403 7646 5.072600 TCCTTAAGACTTTGCCAGACCTTAA 59.927 40.000 3.36 0.00 33.85 1.85
3404 7647 5.946377 CCTTAAGACTTTGCCAGACCTTAAT 59.054 40.000 3.36 0.00 34.16 1.40
3405 7648 6.434340 CCTTAAGACTTTGCCAGACCTTAATT 59.566 38.462 3.36 0.00 34.16 1.40
3406 7649 7.039714 CCTTAAGACTTTGCCAGACCTTAATTT 60.040 37.037 3.36 0.00 34.16 1.82
3407 7650 5.966742 AGACTTTGCCAGACCTTAATTTC 57.033 39.130 0.00 0.00 0.00 2.17
3408 7651 5.635120 AGACTTTGCCAGACCTTAATTTCT 58.365 37.500 0.00 0.00 0.00 2.52
3409 7652 6.071320 AGACTTTGCCAGACCTTAATTTCTT 58.929 36.000 0.00 0.00 0.00 2.52
3410 7653 6.551227 AGACTTTGCCAGACCTTAATTTCTTT 59.449 34.615 0.00 0.00 0.00 2.52
3411 7654 6.749139 ACTTTGCCAGACCTTAATTTCTTTC 58.251 36.000 0.00 0.00 0.00 2.62
3412 7655 5.722021 TTGCCAGACCTTAATTTCTTTCC 57.278 39.130 0.00 0.00 0.00 3.13
3413 7656 3.756434 TGCCAGACCTTAATTTCTTTCCG 59.244 43.478 0.00 0.00 0.00 4.30
3414 7657 3.756963 GCCAGACCTTAATTTCTTTCCGT 59.243 43.478 0.00 0.00 0.00 4.69
3415 7658 4.142665 GCCAGACCTTAATTTCTTTCCGTC 60.143 45.833 0.00 0.00 0.00 4.79
3416 7659 4.395231 CCAGACCTTAATTTCTTTCCGTCC 59.605 45.833 0.00 0.00 0.00 4.79
3417 7660 5.246307 CAGACCTTAATTTCTTTCCGTCCT 58.754 41.667 0.00 0.00 0.00 3.85
3418 7661 5.351740 CAGACCTTAATTTCTTTCCGTCCTC 59.648 44.000 0.00 0.00 0.00 3.71
3419 7662 4.586884 ACCTTAATTTCTTTCCGTCCTCC 58.413 43.478 0.00 0.00 0.00 4.30
3420 7663 3.621715 CCTTAATTTCTTTCCGTCCTCCG 59.378 47.826 0.00 0.00 0.00 4.63
3421 7664 1.450025 AATTTCTTTCCGTCCTCCGC 58.550 50.000 0.00 0.00 34.38 5.54
3422 7665 0.392595 ATTTCTTTCCGTCCTCCGCC 60.393 55.000 0.00 0.00 34.38 6.13
3423 7666 1.477685 TTTCTTTCCGTCCTCCGCCT 61.478 55.000 0.00 0.00 34.38 5.52
3424 7667 1.885163 TTCTTTCCGTCCTCCGCCTC 61.885 60.000 0.00 0.00 34.38 4.70
3425 7668 2.283676 TTTCCGTCCTCCGCCTCT 60.284 61.111 0.00 0.00 34.38 3.69
3426 7669 2.564553 CTTTCCGTCCTCCGCCTCTG 62.565 65.000 0.00 0.00 34.38 3.35
3475 7718 2.161012 CCATGACACAAGCTCACATCAC 59.839 50.000 0.00 0.00 0.00 3.06
3497 9562 6.368791 TCACAAACTGCTCTGTACAATCATAC 59.631 38.462 0.00 0.00 0.00 2.39
3931 10512 9.469807 CATCTCAACTGGTAAGACTGATATAAC 57.530 37.037 0.00 0.00 0.00 1.89
4291 11020 7.872881 TGCAAAATACGAACAAGGTACAATAA 58.127 30.769 0.00 0.00 0.00 1.40
4305 11042 9.855021 CAAGGTACAATAATCTTAAAACAAGGG 57.145 33.333 0.00 0.00 0.00 3.95
4351 11116 7.278868 GGATTGATAGAACACTGAACCTAACAG 59.721 40.741 0.00 0.00 40.68 3.16
4445 11258 0.861837 CGTGCAAGAGGTCTGTTGTC 59.138 55.000 9.15 3.54 36.37 3.18
4475 11289 6.014012 CCCTCAGTAAACATTTTCCCCTTTA 58.986 40.000 0.00 0.00 0.00 1.85
4494 11308 7.286087 CCCCTTTATTCAATCTTCATGACATGA 59.714 37.037 14.24 14.24 37.55 3.07
4577 11426 1.746239 CACTGGCCACATCGATGCA 60.746 57.895 25.11 13.53 0.00 3.96
4641 11492 9.500864 GCTCGCACTATACCTACTATAAATAAC 57.499 37.037 0.00 0.00 0.00 1.89
4673 13274 6.920569 ACTCCAACGATAATTAATCACACC 57.079 37.500 0.00 0.00 33.87 4.16
4709 13350 6.305693 AGAGTTTAGACTGAATGTTGCAAC 57.694 37.500 22.83 22.83 35.88 4.17
5293 13960 2.668550 GACACGGGTGCCTGGAAC 60.669 66.667 0.00 0.00 0.00 3.62
5344 14015 0.110373 AACGATTTGCTTTCGACGGC 60.110 50.000 9.83 2.26 39.81 5.68
5345 14016 1.225376 ACGATTTGCTTTCGACGGCA 61.225 50.000 7.31 7.31 39.81 5.69
5346 14017 0.110419 CGATTTGCTTTCGACGGCAA 60.110 50.000 16.92 16.92 45.06 4.52
5347 14018 1.327507 GATTTGCTTTCGACGGCAAC 58.672 50.000 19.52 9.14 46.14 4.17
5348 14019 0.665835 ATTTGCTTTCGACGGCAACA 59.334 45.000 19.52 13.06 46.14 3.33
5349 14020 0.248296 TTTGCTTTCGACGGCAACAC 60.248 50.000 19.52 0.00 46.14 3.32
5350 14021 2.054140 TTGCTTTCGACGGCAACACC 62.054 55.000 16.92 0.00 42.45 4.16
5351 14022 2.251642 GCTTTCGACGGCAACACCT 61.252 57.895 0.00 0.00 35.61 4.00
5377 14048 4.617959 TCAAGTAGAGAAAACGTGACTGG 58.382 43.478 0.00 0.00 31.72 4.00
5408 14079 4.385825 TGCTGTTTAGACCGATTTTCACT 58.614 39.130 0.00 0.00 0.00 3.41
5507 14206 8.045720 AGAGGATGGAAAATAAGCTATTGGTA 57.954 34.615 0.00 0.00 0.00 3.25
5527 14226 4.971830 GGTAAACGGTTAACAGTTCTTTGC 59.028 41.667 21.76 11.57 33.29 3.68
5544 14244 0.662619 TGCTTTGTCCTTGTCTTGCG 59.337 50.000 0.00 0.00 0.00 4.85
5641 14414 5.883661 ACTGAAATGAGTGAACAAACACAG 58.116 37.500 0.00 0.00 42.45 3.66
5651 14424 8.898761 TGAGTGAACAAACACAGTAAAATATGT 58.101 29.630 0.00 0.00 42.45 2.29
5736 14815 5.864418 AGTACTGTACTGACTTTGTTGGA 57.136 39.130 19.09 0.00 37.69 3.53
5763 14843 8.764524 ACAGAATTAACGAGATATATTGGAGC 57.235 34.615 0.00 0.00 0.00 4.70
5830 15037 7.439157 TGTTTCTGGAGAAGATTTATGTGTG 57.561 36.000 0.00 0.00 33.93 3.82
5865 15072 6.003950 TCTTGAATAAAGGTGGTTTCAGAGG 58.996 40.000 0.00 0.00 36.46 3.69
5866 15073 4.662278 TGAATAAAGGTGGTTTCAGAGGG 58.338 43.478 0.00 0.00 0.00 4.30
5867 15074 3.739401 ATAAAGGTGGTTTCAGAGGGG 57.261 47.619 0.00 0.00 0.00 4.79
5868 15075 0.482887 AAAGGTGGTTTCAGAGGGGG 59.517 55.000 0.00 0.00 0.00 5.40
5891 15098 5.946377 GGGTTTTCAGATGTTTCAGGTATCT 59.054 40.000 0.00 0.00 0.00 1.98
5923 15130 3.228188 ACTTGACAGGCTCAATTCCAA 57.772 42.857 0.00 0.00 38.26 3.53
5958 15165 5.220931 GCAGTTGACTTCATTGACTGTTCTT 60.221 40.000 10.00 0.00 39.79 2.52
5963 15170 6.959361 TGACTTCATTGACTGTTCTTTAAGC 58.041 36.000 0.00 0.00 0.00 3.09
5980 15187 7.193595 TCTTTAAGCTGAGCAAGTTTTGTAAC 58.806 34.615 7.39 0.00 31.02 2.50
5997 15204 5.993748 TGTAACATTTTGATCCTTTCCCC 57.006 39.130 0.00 0.00 0.00 4.81
5998 15205 4.775253 TGTAACATTTTGATCCTTTCCCCC 59.225 41.667 0.00 0.00 0.00 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.228343 AGTAGTATGTATCGCCTTCCGC 59.772 50.000 0.00 0.00 36.73 5.54
1 2 3.119919 GGAGTAGTATGTATCGCCTTCCG 60.120 52.174 0.00 0.00 38.61 4.30
2 3 3.825014 TGGAGTAGTATGTATCGCCTTCC 59.175 47.826 0.00 0.00 0.00 3.46
3 4 5.646577 ATGGAGTAGTATGTATCGCCTTC 57.353 43.478 0.00 0.00 0.00 3.46
5 6 5.335740 CGAAATGGAGTAGTATGTATCGCCT 60.336 44.000 0.00 0.00 0.00 5.52
6 7 4.857588 CGAAATGGAGTAGTATGTATCGCC 59.142 45.833 0.00 0.00 0.00 5.54
7 8 5.696822 TCGAAATGGAGTAGTATGTATCGC 58.303 41.667 0.00 0.00 0.00 4.58
9 10 7.760340 GGGAATCGAAATGGAGTAGTATGTATC 59.240 40.741 0.00 0.00 0.00 2.24
10 11 7.455008 AGGGAATCGAAATGGAGTAGTATGTAT 59.545 37.037 0.00 0.00 0.00 2.29
11 12 6.781014 AGGGAATCGAAATGGAGTAGTATGTA 59.219 38.462 0.00 0.00 0.00 2.29
12 13 5.602978 AGGGAATCGAAATGGAGTAGTATGT 59.397 40.000 0.00 0.00 0.00 2.29
13 14 6.102897 AGGGAATCGAAATGGAGTAGTATG 57.897 41.667 0.00 0.00 0.00 2.39
14 15 7.850935 TTAGGGAATCGAAATGGAGTAGTAT 57.149 36.000 0.00 0.00 0.00 2.12
15 16 7.664552 TTTAGGGAATCGAAATGGAGTAGTA 57.335 36.000 0.00 0.00 0.00 1.82
16 17 6.555463 TTTAGGGAATCGAAATGGAGTAGT 57.445 37.500 0.00 0.00 0.00 2.73
17 18 7.859325 TTTTTAGGGAATCGAAATGGAGTAG 57.141 36.000 0.00 0.00 0.00 2.57
41 42 6.575162 ATTCAGCGAAATGGACTAGTTTTT 57.425 33.333 0.00 0.00 0.00 1.94
42 43 6.575162 AATTCAGCGAAATGGACTAGTTTT 57.425 33.333 0.00 0.00 0.00 2.43
43 44 6.575162 AAATTCAGCGAAATGGACTAGTTT 57.425 33.333 0.00 0.00 0.00 2.66
44 45 6.016276 ACAAAATTCAGCGAAATGGACTAGTT 60.016 34.615 0.00 0.00 0.00 2.24
45 46 5.473504 ACAAAATTCAGCGAAATGGACTAGT 59.526 36.000 0.00 0.00 0.00 2.57
46 47 5.942872 ACAAAATTCAGCGAAATGGACTAG 58.057 37.500 0.00 0.00 0.00 2.57
47 48 5.957842 ACAAAATTCAGCGAAATGGACTA 57.042 34.783 0.00 0.00 0.00 2.59
48 49 4.853924 ACAAAATTCAGCGAAATGGACT 57.146 36.364 0.00 0.00 0.00 3.85
49 50 5.699839 AGTACAAAATTCAGCGAAATGGAC 58.300 37.500 0.00 8.20 0.00 4.02
50 51 5.957842 AGTACAAAATTCAGCGAAATGGA 57.042 34.783 0.00 0.00 0.00 3.41
51 52 5.920273 ACAAGTACAAAATTCAGCGAAATGG 59.080 36.000 0.00 0.00 0.00 3.16
52 53 6.614162 GCACAAGTACAAAATTCAGCGAAATG 60.614 38.462 0.00 0.00 0.00 2.32
53 54 5.402270 GCACAAGTACAAAATTCAGCGAAAT 59.598 36.000 0.00 0.00 0.00 2.17
54 55 4.737765 GCACAAGTACAAAATTCAGCGAAA 59.262 37.500 0.00 0.00 0.00 3.46
55 56 4.286910 GCACAAGTACAAAATTCAGCGAA 58.713 39.130 0.00 0.00 0.00 4.70
56 57 3.304391 GGCACAAGTACAAAATTCAGCGA 60.304 43.478 0.00 0.00 0.00 4.93
57 58 2.979813 GGCACAAGTACAAAATTCAGCG 59.020 45.455 0.00 0.00 0.00 5.18
58 59 2.979813 CGGCACAAGTACAAAATTCAGC 59.020 45.455 0.00 0.00 0.00 4.26
59 60 2.979813 GCGGCACAAGTACAAAATTCAG 59.020 45.455 0.00 0.00 0.00 3.02
60 61 2.621055 AGCGGCACAAGTACAAAATTCA 59.379 40.909 1.45 0.00 0.00 2.57
61 62 2.979813 CAGCGGCACAAGTACAAAATTC 59.020 45.455 1.45 0.00 0.00 2.17
62 63 2.288152 CCAGCGGCACAAGTACAAAATT 60.288 45.455 1.45 0.00 0.00 1.82
63 64 1.269448 CCAGCGGCACAAGTACAAAAT 59.731 47.619 1.45 0.00 0.00 1.82
64 65 0.665835 CCAGCGGCACAAGTACAAAA 59.334 50.000 1.45 0.00 0.00 2.44
65 66 1.169661 CCCAGCGGCACAAGTACAAA 61.170 55.000 1.45 0.00 0.00 2.83
66 67 1.599518 CCCAGCGGCACAAGTACAA 60.600 57.895 1.45 0.00 0.00 2.41
67 68 2.031919 CCCAGCGGCACAAGTACA 59.968 61.111 1.45 0.00 0.00 2.90
77 78 3.655810 GACTGTCTCAGCCCAGCGG 62.656 68.421 0.00 0.00 34.37 5.52
78 79 2.125753 GACTGTCTCAGCCCAGCG 60.126 66.667 0.00 0.00 34.37 5.18
79 80 0.952984 GTTGACTGTCTCAGCCCAGC 60.953 60.000 9.51 0.00 34.37 4.85
80 81 0.683973 AGTTGACTGTCTCAGCCCAG 59.316 55.000 9.51 0.00 34.37 4.45
81 82 1.131638 AAGTTGACTGTCTCAGCCCA 58.868 50.000 9.51 0.00 34.37 5.36
82 83 2.262423 AAAGTTGACTGTCTCAGCCC 57.738 50.000 9.51 0.00 34.37 5.19
83 84 4.153117 CACATAAAGTTGACTGTCTCAGCC 59.847 45.833 9.51 0.00 34.37 4.85
84 85 4.377841 GCACATAAAGTTGACTGTCTCAGC 60.378 45.833 9.51 0.00 34.37 4.26
85 86 4.993584 AGCACATAAAGTTGACTGTCTCAG 59.006 41.667 9.51 0.00 37.52 3.35
86 87 4.751600 CAGCACATAAAGTTGACTGTCTCA 59.248 41.667 9.51 0.00 0.00 3.27
87 88 4.991056 TCAGCACATAAAGTTGACTGTCTC 59.009 41.667 9.51 2.72 0.00 3.36
88 89 4.960938 TCAGCACATAAAGTTGACTGTCT 58.039 39.130 9.51 0.00 0.00 3.41
89 90 4.153117 CCTCAGCACATAAAGTTGACTGTC 59.847 45.833 0.00 0.00 0.00 3.51
90 91 4.067896 CCTCAGCACATAAAGTTGACTGT 58.932 43.478 0.00 0.00 0.00 3.55
91 92 4.067896 ACCTCAGCACATAAAGTTGACTG 58.932 43.478 0.00 0.00 0.00 3.51
92 93 4.202357 TGACCTCAGCACATAAAGTTGACT 60.202 41.667 0.00 0.00 0.00 3.41
93 94 4.065088 TGACCTCAGCACATAAAGTTGAC 58.935 43.478 0.00 0.00 0.00 3.18
94 95 4.350368 TGACCTCAGCACATAAAGTTGA 57.650 40.909 0.00 0.00 0.00 3.18
95 96 5.437289 TTTGACCTCAGCACATAAAGTTG 57.563 39.130 0.00 0.00 0.00 3.16
96 97 7.759489 TTATTTGACCTCAGCACATAAAGTT 57.241 32.000 0.00 0.00 0.00 2.66
97 98 7.759489 TTTATTTGACCTCAGCACATAAAGT 57.241 32.000 0.00 0.00 0.00 2.66
98 99 9.643693 AAATTTATTTGACCTCAGCACATAAAG 57.356 29.630 0.00 0.00 0.00 1.85
99 100 9.995003 AAAATTTATTTGACCTCAGCACATAAA 57.005 25.926 0.00 0.00 0.00 1.40
100 101 9.995003 AAAAATTTATTTGACCTCAGCACATAA 57.005 25.926 0.00 0.00 0.00 1.90
126 127 9.715121 CAAACACTGTTAGGTAGGAAGTAATAA 57.285 33.333 0.00 0.00 0.00 1.40
127 128 7.820872 GCAAACACTGTTAGGTAGGAAGTAATA 59.179 37.037 0.00 0.00 0.00 0.98
128 129 6.653740 GCAAACACTGTTAGGTAGGAAGTAAT 59.346 38.462 0.00 0.00 0.00 1.89
129 130 5.993441 GCAAACACTGTTAGGTAGGAAGTAA 59.007 40.000 0.00 0.00 0.00 2.24
130 131 5.306160 AGCAAACACTGTTAGGTAGGAAGTA 59.694 40.000 0.00 0.00 0.00 2.24
131 132 4.102681 AGCAAACACTGTTAGGTAGGAAGT 59.897 41.667 0.00 0.00 0.00 3.01
132 133 4.452455 CAGCAAACACTGTTAGGTAGGAAG 59.548 45.833 0.00 0.00 32.78 3.46
133 134 4.101898 TCAGCAAACACTGTTAGGTAGGAA 59.898 41.667 0.00 0.00 38.84 3.36
134 135 3.644265 TCAGCAAACACTGTTAGGTAGGA 59.356 43.478 0.00 0.00 38.84 2.94
135 136 4.002906 TCAGCAAACACTGTTAGGTAGG 57.997 45.455 0.00 0.00 38.84 3.18
136 137 5.057149 ACTTCAGCAAACACTGTTAGGTAG 58.943 41.667 0.00 0.00 38.84 3.18
137 138 5.031066 ACTTCAGCAAACACTGTTAGGTA 57.969 39.130 0.00 0.00 38.84 3.08
138 139 3.886123 ACTTCAGCAAACACTGTTAGGT 58.114 40.909 0.00 0.00 38.84 3.08
139 140 4.900635 AACTTCAGCAAACACTGTTAGG 57.099 40.909 0.00 0.00 38.84 2.69
140 141 5.233476 TCGTAACTTCAGCAAACACTGTTAG 59.767 40.000 0.00 0.00 38.84 2.34
141 142 5.110598 TCGTAACTTCAGCAAACACTGTTA 58.889 37.500 0.00 0.00 38.84 2.41
142 143 3.936453 TCGTAACTTCAGCAAACACTGTT 59.064 39.130 0.00 0.00 38.84 3.16
143 144 3.527533 TCGTAACTTCAGCAAACACTGT 58.472 40.909 0.00 0.00 38.84 3.55
144 145 4.530094 TTCGTAACTTCAGCAAACACTG 57.470 40.909 0.00 0.00 39.12 3.66
145 146 5.751243 AATTCGTAACTTCAGCAAACACT 57.249 34.783 0.00 0.00 0.00 3.55
146 147 5.558888 CGTAATTCGTAACTTCAGCAAACAC 59.441 40.000 0.00 0.00 34.52 3.32
147 148 5.462729 TCGTAATTCGTAACTTCAGCAAACA 59.537 36.000 0.00 0.00 40.80 2.83
148 149 5.908106 TCGTAATTCGTAACTTCAGCAAAC 58.092 37.500 0.00 0.00 40.80 2.93
149 150 6.453265 CGATCGTAATTCGTAACTTCAGCAAA 60.453 38.462 7.03 0.00 40.80 3.68
150 151 5.004061 CGATCGTAATTCGTAACTTCAGCAA 59.996 40.000 7.03 0.00 40.80 3.91
151 152 4.497966 CGATCGTAATTCGTAACTTCAGCA 59.502 41.667 7.03 0.00 40.80 4.41
152 153 4.085721 CCGATCGTAATTCGTAACTTCAGC 60.086 45.833 15.09 0.00 40.80 4.26
153 154 4.085721 GCCGATCGTAATTCGTAACTTCAG 60.086 45.833 15.09 0.00 40.80 3.02
154 155 3.792956 GCCGATCGTAATTCGTAACTTCA 59.207 43.478 15.09 0.00 40.80 3.02
155 156 3.181178 GGCCGATCGTAATTCGTAACTTC 59.819 47.826 15.09 0.00 40.80 3.01
156 157 3.118542 GGCCGATCGTAATTCGTAACTT 58.881 45.455 15.09 0.00 40.80 2.66
157 158 2.360165 AGGCCGATCGTAATTCGTAACT 59.640 45.455 15.09 0.00 40.80 2.24
158 159 2.735823 AGGCCGATCGTAATTCGTAAC 58.264 47.619 15.09 0.00 40.80 2.50
159 160 3.441496 AAGGCCGATCGTAATTCGTAA 57.559 42.857 15.09 0.00 40.80 3.18
160 161 3.441496 AAAGGCCGATCGTAATTCGTA 57.559 42.857 15.09 0.00 40.80 3.43
161 162 2.304751 AAAGGCCGATCGTAATTCGT 57.695 45.000 15.09 0.00 40.80 3.85
162 163 2.605818 TGAAAAGGCCGATCGTAATTCG 59.394 45.455 15.09 0.00 41.41 3.34
163 164 4.094442 AGTTGAAAAGGCCGATCGTAATTC 59.906 41.667 15.09 11.01 0.00 2.17
164 165 4.007659 AGTTGAAAAGGCCGATCGTAATT 58.992 39.130 15.09 2.21 0.00 1.40
165 166 3.374058 CAGTTGAAAAGGCCGATCGTAAT 59.626 43.478 15.09 0.00 0.00 1.89
166 167 2.739913 CAGTTGAAAAGGCCGATCGTAA 59.260 45.455 15.09 0.00 0.00 3.18
167 168 2.028839 TCAGTTGAAAAGGCCGATCGTA 60.029 45.455 15.09 0.00 0.00 3.43
168 169 1.156736 CAGTTGAAAAGGCCGATCGT 58.843 50.000 15.09 0.00 0.00 3.73
169 170 1.394917 CTCAGTTGAAAAGGCCGATCG 59.605 52.381 8.51 8.51 0.00 3.69
170 171 1.131315 GCTCAGTTGAAAAGGCCGATC 59.869 52.381 0.00 0.00 0.00 3.69
171 172 1.168714 GCTCAGTTGAAAAGGCCGAT 58.831 50.000 0.00 0.00 0.00 4.18
172 173 0.108585 AGCTCAGTTGAAAAGGCCGA 59.891 50.000 0.00 0.00 0.00 5.54
173 174 0.954452 AAGCTCAGTTGAAAAGGCCG 59.046 50.000 0.00 0.00 0.00 6.13
174 175 1.068954 CGAAGCTCAGTTGAAAAGGCC 60.069 52.381 0.00 0.00 0.00 5.19
175 176 1.604278 ACGAAGCTCAGTTGAAAAGGC 59.396 47.619 0.00 0.00 0.00 4.35
176 177 2.224314 GGACGAAGCTCAGTTGAAAAGG 59.776 50.000 0.00 0.00 0.00 3.11
177 178 2.096713 CGGACGAAGCTCAGTTGAAAAG 60.097 50.000 0.00 0.00 0.00 2.27
178 179 1.864711 CGGACGAAGCTCAGTTGAAAA 59.135 47.619 0.00 0.00 0.00 2.29
179 180 1.497991 CGGACGAAGCTCAGTTGAAA 58.502 50.000 0.00 0.00 0.00 2.69
180 181 0.319555 CCGGACGAAGCTCAGTTGAA 60.320 55.000 0.00 0.00 0.00 2.69
181 182 1.289066 CCGGACGAAGCTCAGTTGA 59.711 57.895 0.00 0.00 0.00 3.18
182 183 2.383527 GCCGGACGAAGCTCAGTTG 61.384 63.158 5.05 0.00 0.00 3.16
183 184 2.048127 GCCGGACGAAGCTCAGTT 60.048 61.111 5.05 0.00 0.00 3.16
184 185 3.288308 CTGCCGGACGAAGCTCAGT 62.288 63.158 5.05 0.00 0.00 3.41
185 186 2.507992 CTGCCGGACGAAGCTCAG 60.508 66.667 5.05 0.00 0.00 3.35
186 187 3.303135 ACTGCCGGACGAAGCTCA 61.303 61.111 5.05 0.00 0.00 4.26
187 188 2.811317 CACTGCCGGACGAAGCTC 60.811 66.667 5.05 0.00 0.00 4.09
205 206 2.247437 GCCTGAAGCGCCGATTAGG 61.247 63.158 2.29 7.88 44.97 2.69
206 207 3.324035 GCCTGAAGCGCCGATTAG 58.676 61.111 2.29 0.00 0.00 1.73
215 216 1.663695 TTAGTAATGGCGCCTGAAGC 58.336 50.000 29.70 13.81 38.52 3.86
216 217 2.354821 GGTTTAGTAATGGCGCCTGAAG 59.645 50.000 29.70 0.00 0.00 3.02
217 218 2.026636 AGGTTTAGTAATGGCGCCTGAA 60.027 45.455 29.70 7.94 0.00 3.02
218 219 1.557832 AGGTTTAGTAATGGCGCCTGA 59.442 47.619 29.70 8.87 0.00 3.86
219 220 1.670811 CAGGTTTAGTAATGGCGCCTG 59.329 52.381 29.70 8.89 36.49 4.85
220 221 2.017113 GCAGGTTTAGTAATGGCGCCT 61.017 52.381 29.70 11.31 0.00 5.52
221 222 0.380733 GCAGGTTTAGTAATGGCGCC 59.619 55.000 22.73 22.73 0.00 6.53
222 223 0.380733 GGCAGGTTTAGTAATGGCGC 59.619 55.000 0.00 0.00 0.00 6.53
224 225 0.380733 GCGGCAGGTTTAGTAATGGC 59.619 55.000 0.00 0.00 35.08 4.40
225 226 2.038387 AGCGGCAGGTTTAGTAATGG 57.962 50.000 1.45 0.00 0.00 3.16
226 227 2.477863 GCAAGCGGCAGGTTTAGTAATG 60.478 50.000 1.45 0.00 43.97 1.90
227 228 1.743394 GCAAGCGGCAGGTTTAGTAAT 59.257 47.619 1.45 0.00 43.97 1.89
228 229 1.161843 GCAAGCGGCAGGTTTAGTAA 58.838 50.000 1.45 0.00 43.97 2.24
229 230 1.017177 CGCAAGCGGCAGGTTTAGTA 61.017 55.000 6.55 0.00 45.17 1.82
230 231 2.325082 CGCAAGCGGCAGGTTTAGT 61.325 57.895 6.55 0.00 45.17 2.24
231 232 2.325082 ACGCAAGCGGCAGGTTTAG 61.325 57.895 19.30 0.00 45.17 1.85
232 233 2.281208 ACGCAAGCGGCAGGTTTA 60.281 55.556 19.30 0.00 45.17 2.01
233 234 3.964875 CACGCAAGCGGCAGGTTT 61.965 61.111 19.30 0.00 45.17 3.27
243 244 2.192861 TTTGGCCAGTCCACGCAAG 61.193 57.895 5.11 0.00 46.55 4.01
244 245 2.124109 TTTGGCCAGTCCACGCAA 60.124 55.556 5.11 0.00 46.55 4.85
245 246 2.904866 GTTTGGCCAGTCCACGCA 60.905 61.111 5.11 0.00 46.55 5.24
246 247 2.406452 CTTGTTTGGCCAGTCCACGC 62.406 60.000 5.11 0.00 46.55 5.34
247 248 1.654220 CTTGTTTGGCCAGTCCACG 59.346 57.895 5.11 0.00 46.55 4.94
248 249 1.363807 GCTTGTTTGGCCAGTCCAC 59.636 57.895 5.11 2.31 46.55 4.02
249 250 2.192861 CGCTTGTTTGGCCAGTCCA 61.193 57.895 5.11 0.56 44.85 4.02
250 251 2.644992 CGCTTGTTTGGCCAGTCC 59.355 61.111 5.11 0.00 0.00 3.85
251 252 2.050077 GCGCTTGTTTGGCCAGTC 60.050 61.111 5.11 3.69 0.00 3.51
252 253 2.832661 TGCGCTTGTTTGGCCAGT 60.833 55.556 9.73 0.00 0.00 4.00
253 254 2.355009 GTGCGCTTGTTTGGCCAG 60.355 61.111 9.73 0.00 0.00 4.85
254 255 4.263209 CGTGCGCTTGTTTGGCCA 62.263 61.111 9.73 0.00 0.00 5.36
255 256 4.999939 CCGTGCGCTTGTTTGGCC 63.000 66.667 9.73 0.00 0.00 5.36
256 257 3.267597 ATCCGTGCGCTTGTTTGGC 62.268 57.895 9.73 0.00 0.00 4.52
257 258 1.442520 CATCCGTGCGCTTGTTTGG 60.443 57.895 9.73 1.15 0.00 3.28
258 259 0.725784 GTCATCCGTGCGCTTGTTTG 60.726 55.000 9.73 1.11 0.00 2.93
259 260 0.884704 AGTCATCCGTGCGCTTGTTT 60.885 50.000 9.73 0.00 0.00 2.83
260 261 1.291877 GAGTCATCCGTGCGCTTGTT 61.292 55.000 9.73 0.00 0.00 2.83
261 262 1.738099 GAGTCATCCGTGCGCTTGT 60.738 57.895 9.73 0.00 0.00 3.16
262 263 2.792290 CGAGTCATCCGTGCGCTTG 61.792 63.158 9.73 0.00 0.00 4.01
263 264 2.507102 CGAGTCATCCGTGCGCTT 60.507 61.111 9.73 0.00 0.00 4.68
266 267 2.951745 GAGCGAGTCATCCGTGCG 60.952 66.667 0.00 0.00 0.00 5.34
267 268 2.161486 GTGAGCGAGTCATCCGTGC 61.161 63.158 0.00 0.00 37.56 5.34
268 269 1.869574 CGTGAGCGAGTCATCCGTG 60.870 63.158 0.00 0.00 41.33 4.94
269 270 2.485582 CGTGAGCGAGTCATCCGT 59.514 61.111 0.00 0.00 41.33 4.69
281 282 0.168788 AAATCGGTTGCATGCGTGAG 59.831 50.000 14.09 4.95 0.00 3.51
282 283 0.167908 GAAATCGGTTGCATGCGTGA 59.832 50.000 14.09 8.28 0.00 4.35
283 284 1.127571 CGAAATCGGTTGCATGCGTG 61.128 55.000 14.09 0.09 35.37 5.34
284 285 1.134487 CGAAATCGGTTGCATGCGT 59.866 52.632 14.09 0.00 35.37 5.24
285 286 0.454285 AACGAAATCGGTTGCATGCG 60.454 50.000 14.09 0.00 44.95 4.73
286 287 1.259316 GAACGAAATCGGTTGCATGC 58.741 50.000 11.82 11.82 40.66 4.06
287 288 2.610219 TGAACGAAATCGGTTGCATG 57.390 45.000 7.81 0.00 40.66 4.06
288 289 3.727673 CGAATGAACGAAATCGGTTGCAT 60.728 43.478 7.81 0.00 40.66 3.96
289 290 2.412195 CGAATGAACGAAATCGGTTGCA 60.412 45.455 7.81 0.00 40.66 4.08
290 291 2.166007 CGAATGAACGAAATCGGTTGC 58.834 47.619 7.81 0.00 40.66 4.17
291 292 2.166007 GCGAATGAACGAAATCGGTTG 58.834 47.619 7.81 0.00 40.66 3.77
292 293 1.129811 GGCGAATGAACGAAATCGGTT 59.870 47.619 7.81 0.00 40.66 4.44
293 294 0.725117 GGCGAATGAACGAAATCGGT 59.275 50.000 7.81 0.00 44.92 4.69
294 295 0.315059 CGGCGAATGAACGAAATCGG 60.315 55.000 0.00 0.00 44.95 4.18
295 296 0.368907 ACGGCGAATGAACGAAATCG 59.631 50.000 16.62 0.48 46.33 3.34
296 297 2.520686 AACGGCGAATGAACGAAATC 57.479 45.000 16.62 0.00 35.09 2.17
297 298 2.981400 AAACGGCGAATGAACGAAAT 57.019 40.000 16.62 0.00 35.09 2.17
298 299 2.759538 AAAACGGCGAATGAACGAAA 57.240 40.000 16.62 0.00 35.09 3.46
299 300 2.759538 AAAAACGGCGAATGAACGAA 57.240 40.000 16.62 0.00 35.09 3.85
317 318 5.163499 ACAAACAGTTAATGGAGCGGAAAAA 60.163 36.000 0.00 0.00 0.00 1.94
318 319 4.339814 ACAAACAGTTAATGGAGCGGAAAA 59.660 37.500 0.00 0.00 0.00 2.29
319 320 3.886505 ACAAACAGTTAATGGAGCGGAAA 59.113 39.130 0.00 0.00 0.00 3.13
320 321 3.482436 ACAAACAGTTAATGGAGCGGAA 58.518 40.909 0.00 0.00 0.00 4.30
321 322 3.071479 GACAAACAGTTAATGGAGCGGA 58.929 45.455 0.00 0.00 0.00 5.54
322 323 2.159707 CGACAAACAGTTAATGGAGCGG 60.160 50.000 0.00 0.00 0.00 5.52
323 324 2.734606 TCGACAAACAGTTAATGGAGCG 59.265 45.455 0.00 0.00 0.00 5.03
324 325 4.391830 TGATCGACAAACAGTTAATGGAGC 59.608 41.667 0.00 0.00 0.00 4.70
325 326 6.147821 AGTTGATCGACAAACAGTTAATGGAG 59.852 38.462 15.59 0.00 40.36 3.86
326 327 5.995282 AGTTGATCGACAAACAGTTAATGGA 59.005 36.000 15.59 0.00 40.36 3.41
369 370 7.493971 CCATGTTGTTTTAAGTCAATGGTCAAA 59.506 33.333 0.00 0.00 0.00 2.69
444 445 7.570161 ACTCGTTAACTTTTCTCAAATTACGG 58.430 34.615 3.71 0.00 0.00 4.02
483 485 9.614465 GTTTTACTGAAACGTTTTAAAATCTGC 57.386 29.630 22.34 12.14 38.38 4.26
578 580 0.763035 AAACAACAGCTCGGTACCCT 59.237 50.000 6.25 0.00 0.00 4.34
639 643 1.606531 GGAGAGGGCTGACTTGCAT 59.393 57.895 0.00 0.00 34.04 3.96
686 691 0.035739 GTCAACCGGTAGCTGGGAAA 59.964 55.000 8.00 0.00 33.40 3.13
688 693 2.288025 GGTCAACCGGTAGCTGGGA 61.288 63.158 8.00 0.00 33.40 4.37
690 695 1.079127 CAGGTCAACCGGTAGCTGG 60.079 63.158 23.20 9.25 42.08 4.85
692 697 3.369042 TACAGGTCAACCGGTAGCT 57.631 52.632 8.00 5.12 42.60 3.32
700 705 2.011540 GCTACAGCCTACAGGTCAAC 57.988 55.000 0.00 0.00 37.57 3.18
712 717 1.147153 GTGATCAGGGGGCTACAGC 59.853 63.158 0.00 0.00 41.14 4.40
800 812 0.606673 GCTGAAACAGGGGTGTCTCC 60.607 60.000 0.00 0.00 32.11 3.71
801 813 0.606673 GGCTGAAACAGGGGTGTCTC 60.607 60.000 0.00 0.00 32.11 3.36
804 816 2.113139 CGGCTGAAACAGGGGTGT 59.887 61.111 0.00 0.00 31.21 4.16
837 857 2.270986 GGTGGCTTGGAGTGCAAGG 61.271 63.158 23.79 7.79 0.00 3.61
885 906 4.021229 CTGGGACCTGTATATATACCGCA 58.979 47.826 18.20 15.00 32.33 5.69
888 909 3.710165 GGGCTGGGACCTGTATATATACC 59.290 52.174 18.20 4.45 32.33 2.73
920 941 2.359900 GTTGCTAGATTGTGGTGAGGG 58.640 52.381 0.00 0.00 0.00 4.30
929 950 3.811722 TTGCAGTTCGTTGCTAGATTG 57.188 42.857 0.00 0.00 44.38 2.67
951 975 1.181741 TCTCTGTCGCTGGTTCTGCT 61.182 55.000 0.00 0.00 0.00 4.24
958 982 0.033228 GGATGGATCTCTGTCGCTGG 59.967 60.000 0.00 0.00 0.00 4.85
977 1001 4.156922 TCCTTGTCGCTAGAAGAAGAGAAG 59.843 45.833 0.00 0.00 34.87 2.85
1280 1379 8.941977 ACAAACGCTTTTGAGATACATATACAA 58.058 29.630 21.18 0.00 44.38 2.41
1296 1395 5.047188 CCAATAGGAAAACACAAACGCTTT 58.953 37.500 0.00 0.00 36.89 3.51
1298 1397 3.005367 CCCAATAGGAAAACACAAACGCT 59.995 43.478 0.00 0.00 38.24 5.07
1299 1398 3.243602 ACCCAATAGGAAAACACAAACGC 60.244 43.478 0.00 0.00 39.89 4.84
1300 1399 4.577834 ACCCAATAGGAAAACACAAACG 57.422 40.909 0.00 0.00 39.89 3.60
1328 1427 2.320745 TAGCCACTGATGCATCACTG 57.679 50.000 25.42 23.66 32.50 3.66
1329 1428 3.118149 TCATTAGCCACTGATGCATCACT 60.118 43.478 25.42 21.29 32.50 3.41
1330 1429 3.208594 TCATTAGCCACTGATGCATCAC 58.791 45.455 25.42 15.38 32.50 3.06
1350 1462 7.814107 TCCAAGCAGAACATCATTACAAATTTC 59.186 33.333 0.00 0.00 0.00 2.17
1359 1473 5.475719 CACAAATCCAAGCAGAACATCATT 58.524 37.500 0.00 0.00 0.00 2.57
1393 1511 6.626623 GCTTCATCATTACAAATCCAAGCAGT 60.627 38.462 0.00 0.00 35.01 4.40
1394 1512 5.747197 GCTTCATCATTACAAATCCAAGCAG 59.253 40.000 0.00 0.00 35.01 4.24
1395 1513 5.419788 AGCTTCATCATTACAAATCCAAGCA 59.580 36.000 0.00 0.00 36.91 3.91
1396 1514 5.747197 CAGCTTCATCATTACAAATCCAAGC 59.253 40.000 0.00 0.00 35.09 4.01
1397 1515 6.095860 TCCAGCTTCATCATTACAAATCCAAG 59.904 38.462 0.00 0.00 0.00 3.61
1398 1516 5.951148 TCCAGCTTCATCATTACAAATCCAA 59.049 36.000 0.00 0.00 0.00 3.53
1400 1518 5.009410 CCTCCAGCTTCATCATTACAAATCC 59.991 44.000 0.00 0.00 0.00 3.01
1401 1519 5.009410 CCCTCCAGCTTCATCATTACAAATC 59.991 44.000 0.00 0.00 0.00 2.17
1402 1520 4.891756 CCCTCCAGCTTCATCATTACAAAT 59.108 41.667 0.00 0.00 0.00 2.32
1404 1522 3.266772 ACCCTCCAGCTTCATCATTACAA 59.733 43.478 0.00 0.00 0.00 2.41
1405 1523 2.846206 ACCCTCCAGCTTCATCATTACA 59.154 45.455 0.00 0.00 0.00 2.41
1406 1524 3.567478 ACCCTCCAGCTTCATCATTAC 57.433 47.619 0.00 0.00 0.00 1.89
1407 1525 5.708736 TTTACCCTCCAGCTTCATCATTA 57.291 39.130 0.00 0.00 0.00 1.90
1408 1526 4.591321 TTTACCCTCCAGCTTCATCATT 57.409 40.909 0.00 0.00 0.00 2.57
1409 1527 4.803329 ATTTACCCTCCAGCTTCATCAT 57.197 40.909 0.00 0.00 0.00 2.45
1410 1528 5.624159 CATATTTACCCTCCAGCTTCATCA 58.376 41.667 0.00 0.00 0.00 3.07
1411 1529 4.457257 GCATATTTACCCTCCAGCTTCATC 59.543 45.833 0.00 0.00 0.00 2.92
1412 1530 4.141181 TGCATATTTACCCTCCAGCTTCAT 60.141 41.667 0.00 0.00 0.00 2.57
1414 1532 3.820557 TGCATATTTACCCTCCAGCTTC 58.179 45.455 0.00 0.00 0.00 3.86
1428 4409 4.900652 ACAGAGACAGAGAGGATGCATATT 59.099 41.667 0.00 0.00 0.00 1.28
1454 4451 6.369005 CAACAGCTGAAACAGAATAAGACAG 58.631 40.000 23.35 0.00 32.44 3.51
1456 4453 5.049129 AGCAACAGCTGAAACAGAATAAGAC 60.049 40.000 23.35 0.00 37.19 3.01
1457 4454 5.065914 AGCAACAGCTGAAACAGAATAAGA 58.934 37.500 23.35 0.00 37.19 2.10
1458 4455 5.368256 AGCAACAGCTGAAACAGAATAAG 57.632 39.130 23.35 0.00 37.19 1.73
1459 4456 5.507817 CCAAGCAACAGCTGAAACAGAATAA 60.508 40.000 23.35 0.00 38.93 1.40
1578 4794 7.071950 TGGACACTTGCTTTATGTAGGGTATAT 59.928 37.037 0.00 0.00 0.00 0.86
1579 4795 6.384595 TGGACACTTGCTTTATGTAGGGTATA 59.615 38.462 0.00 0.00 0.00 1.47
1661 4877 4.875713 CATACCCTGCCCGTGCCC 62.876 72.222 0.00 0.00 36.33 5.36
1662 4878 4.875713 CCATACCCTGCCCGTGCC 62.876 72.222 0.00 0.00 36.33 5.01
1664 4880 4.108299 TGCCATACCCTGCCCGTG 62.108 66.667 0.00 0.00 0.00 4.94
1665 4881 3.797353 CTGCCATACCCTGCCCGT 61.797 66.667 0.00 0.00 0.00 5.28
1853 5141 1.457346 CGGCTCCAAATTTCTGCTCT 58.543 50.000 0.00 0.00 0.00 4.09
1923 5232 2.491693 CTCCTCATAGATCGCCCTTCTC 59.508 54.545 0.00 0.00 0.00 2.87
1936 5245 4.474651 TGGAGCTTGAAATTCCTCCTCATA 59.525 41.667 14.75 0.00 43.34 2.15
1965 5274 1.717113 CTTGTGACAAATGCATGCGTG 59.283 47.619 14.40 13.41 0.00 5.34
2012 5321 7.704899 CCTTTTTCAACTGACGGTTTCTTATTT 59.295 33.333 0.00 0.00 35.74 1.40
2019 5328 2.159156 GGCCTTTTTCAACTGACGGTTT 60.159 45.455 0.00 0.00 35.74 3.27
2022 5331 0.040425 CGGCCTTTTTCAACTGACGG 60.040 55.000 0.00 0.00 0.00 4.79
2061 5370 2.443255 AGGAGGTGTCCAACAAACTGAT 59.557 45.455 0.00 0.00 46.80 2.90
2065 5374 0.668535 GCAGGAGGTGTCCAACAAAC 59.331 55.000 0.00 0.00 46.80 2.93
2070 5379 2.741092 GTCGCAGGAGGTGTCCAA 59.259 61.111 0.00 0.00 46.80 3.53
2092 5401 3.603532 CATCGGCATGTATCTTGGCTAT 58.396 45.455 0.00 0.86 37.50 2.97
2132 5441 2.281970 CTGCTGCTCCCACTTGCA 60.282 61.111 0.00 0.00 37.63 4.08
2178 5487 0.667993 CTGCCGAAGCACCTTGAAAA 59.332 50.000 0.00 0.00 46.52 2.29
2196 5505 1.610522 GTCATTCCAGCTTGCACAACT 59.389 47.619 0.00 0.00 0.00 3.16
2199 5508 1.202794 TCAGTCATTCCAGCTTGCACA 60.203 47.619 0.00 0.00 0.00 4.57
2224 5533 0.040067 GCTTGTGCTTCGAGGGTTTG 60.040 55.000 0.00 0.00 36.03 2.93
2227 5536 2.172483 ATCGCTTGTGCTTCGAGGGT 62.172 55.000 0.00 1.24 40.21 4.34
2373 5682 6.495526 AGCTATCTTTCCACCTATCTACTTCC 59.504 42.308 0.00 0.00 0.00 3.46
2427 5736 1.588861 GCGTCCTTATTTGACTCTCGC 59.411 52.381 0.00 0.00 34.93 5.03
2463 5772 1.699634 ACGCAGGGAGGTTGCATATAT 59.300 47.619 0.00 0.00 41.59 0.86
2464 5773 1.128200 ACGCAGGGAGGTTGCATATA 58.872 50.000 0.00 0.00 41.59 0.86
2492 5801 1.589716 GCCCTGTGAACCAGACATGC 61.590 60.000 0.00 0.00 44.49 4.06
2509 6265 1.971695 CAAAACGGGTCTGGAGGCC 60.972 63.158 0.00 0.00 0.00 5.19
2580 6659 2.620115 GACACCTCGACCGGTTCATATA 59.380 50.000 9.42 0.00 34.29 0.86
2584 6663 2.911484 CGACACCTCGACCGGTTCA 61.911 63.158 9.42 0.00 43.06 3.18
2585 6664 2.126580 CGACACCTCGACCGGTTC 60.127 66.667 9.42 0.00 43.06 3.62
2586 6665 2.595463 TCGACACCTCGACCGGTT 60.595 61.111 9.42 0.00 44.14 4.44
2587 6666 3.054503 CTCGACACCTCGACCGGT 61.055 66.667 6.92 6.92 44.14 5.28
2588 6667 4.477975 GCTCGACACCTCGACCGG 62.478 72.222 0.00 0.00 44.14 5.28
2589 6668 4.477975 GGCTCGACACCTCGACCG 62.478 72.222 0.00 0.00 44.14 4.79
2590 6669 3.343788 CTGGCTCGACACCTCGACC 62.344 68.421 1.65 0.00 44.14 4.79
2591 6670 2.179517 CTGGCTCGACACCTCGAC 59.820 66.667 1.65 0.00 44.14 4.20
2592 6671 3.062466 CCTGGCTCGACACCTCGA 61.062 66.667 1.65 0.00 46.85 4.04
2593 6672 3.343788 GACCTGGCTCGACACCTCG 62.344 68.421 0.00 0.00 41.65 4.63
2594 6673 2.574399 GACCTGGCTCGACACCTC 59.426 66.667 0.00 0.00 0.00 3.85
2636 6879 2.223745 GGTATTTTCCCGTGTGTGTGT 58.776 47.619 0.00 0.00 0.00 3.72
2659 6902 2.556559 GCACCCCAAGGATAAGGAACAA 60.557 50.000 0.00 0.00 36.73 2.83
2662 6905 1.564348 GAGCACCCCAAGGATAAGGAA 59.436 52.381 0.00 0.00 36.73 3.36
2834 7077 7.394359 ACAAAAGCAACATTAGACACTATCCAT 59.606 33.333 0.00 0.00 0.00 3.41
2837 7080 8.034058 AGACAAAAGCAACATTAGACACTATC 57.966 34.615 0.00 0.00 0.00 2.08
2900 7143 7.364144 GGGGTGCTCTAAATGAAAATTGAGAAT 60.364 37.037 0.00 0.00 0.00 2.40
2925 7168 1.077212 CAGGTGCTCCCATCCTTGG 60.077 63.158 0.00 0.00 43.23 3.61
2926 7169 0.549950 ATCAGGTGCTCCCATCCTTG 59.450 55.000 0.00 0.00 34.66 3.61
2927 7170 2.196742 TATCAGGTGCTCCCATCCTT 57.803 50.000 0.00 0.00 34.66 3.36
2928 7171 2.429933 ATATCAGGTGCTCCCATCCT 57.570 50.000 0.00 0.00 34.66 3.24
2929 7172 3.416156 GAAATATCAGGTGCTCCCATCC 58.584 50.000 0.00 0.00 34.66 3.51
2930 7173 3.416156 GGAAATATCAGGTGCTCCCATC 58.584 50.000 0.00 0.00 34.66 3.51
2931 7174 2.108952 GGGAAATATCAGGTGCTCCCAT 59.891 50.000 0.00 0.00 41.91 4.00
2932 7175 1.494721 GGGAAATATCAGGTGCTCCCA 59.505 52.381 0.00 0.00 41.91 4.37
2933 7176 1.202940 GGGGAAATATCAGGTGCTCCC 60.203 57.143 0.00 0.00 41.63 4.30
2934 7177 1.202940 GGGGGAAATATCAGGTGCTCC 60.203 57.143 0.00 0.00 0.00 4.70
2935 7178 2.278332 GGGGGAAATATCAGGTGCTC 57.722 55.000 0.00 0.00 0.00 4.26
3106 7349 3.138798 GTCGCCTGCCTCGTCCTA 61.139 66.667 0.00 0.00 0.00 2.94
3158 7401 1.153549 GTTGTCGCTGCCCTCTAGG 60.154 63.158 0.00 0.00 39.47 3.02
3159 7402 0.037326 TTGTTGTCGCTGCCCTCTAG 60.037 55.000 0.00 0.00 0.00 2.43
3160 7403 0.320421 GTTGTTGTCGCTGCCCTCTA 60.320 55.000 0.00 0.00 0.00 2.43
3161 7404 1.598130 GTTGTTGTCGCTGCCCTCT 60.598 57.895 0.00 0.00 0.00 3.69
3162 7405 2.946762 GTTGTTGTCGCTGCCCTC 59.053 61.111 0.00 0.00 0.00 4.30
3163 7406 2.972505 CGTTGTTGTCGCTGCCCT 60.973 61.111 0.00 0.00 0.00 5.19
3170 7413 1.729131 GCCAATGGCGTTGTTGTCG 60.729 57.895 9.14 3.76 39.62 4.35
3171 7414 4.243383 GCCAATGGCGTTGTTGTC 57.757 55.556 9.14 1.37 39.62 3.18
3192 7435 2.365635 GCCTAGGTCCTGGCTGGA 60.366 66.667 19.53 9.30 45.26 3.86
3193 7436 3.854669 CGCCTAGGTCCTGGCTGG 61.855 72.222 22.40 3.65 46.42 4.85
3194 7437 4.537433 GCGCCTAGGTCCTGGCTG 62.537 72.222 22.40 17.94 46.42 4.85
3197 7440 2.123425 TAGGCGCCTAGGTCCTGG 60.123 66.667 32.24 0.00 0.00 4.45
3198 7441 3.449349 CTAGGCGCCTAGGTCCTG 58.551 66.667 43.43 25.63 41.58 3.86
3210 7453 4.237207 GTGCCCTACCCGCTAGGC 62.237 72.222 0.00 0.00 41.03 3.93
3211 7454 2.444140 AGTGCCCTACCCGCTAGG 60.444 66.667 0.00 0.00 41.96 3.02
3212 7455 2.815308 CAGTGCCCTACCCGCTAG 59.185 66.667 0.00 0.00 0.00 3.42
3213 7456 3.467226 GCAGTGCCCTACCCGCTA 61.467 66.667 2.85 0.00 0.00 4.26
3231 7474 1.673168 GCTAGAAGACCCAGGCAATG 58.327 55.000 0.00 0.00 0.00 2.82
3232 7475 0.548510 GGCTAGAAGACCCAGGCAAT 59.451 55.000 0.00 0.00 35.11 3.56
3233 7476 0.840288 TGGCTAGAAGACCCAGGCAA 60.840 55.000 0.00 0.00 41.33 4.52
3234 7477 1.229496 TGGCTAGAAGACCCAGGCA 60.229 57.895 0.00 0.00 41.95 4.75
3235 7478 0.548510 AATGGCTAGAAGACCCAGGC 59.451 55.000 0.00 0.00 35.54 4.85
3236 7479 1.133976 CCAATGGCTAGAAGACCCAGG 60.134 57.143 0.00 0.00 31.12 4.45
3237 7480 1.839994 TCCAATGGCTAGAAGACCCAG 59.160 52.381 0.00 0.00 31.12 4.45
3238 7481 1.965414 TCCAATGGCTAGAAGACCCA 58.035 50.000 0.00 0.00 0.00 4.51
3239 7482 2.505819 TCTTCCAATGGCTAGAAGACCC 59.494 50.000 0.00 0.00 40.73 4.46
3240 7483 3.914426 TCTTCCAATGGCTAGAAGACC 57.086 47.619 0.00 0.00 40.73 3.85
3241 7484 5.431765 TGAATCTTCCAATGGCTAGAAGAC 58.568 41.667 3.64 2.64 46.37 3.01
3243 7486 6.956202 AATGAATCTTCCAATGGCTAGAAG 57.044 37.500 7.77 0.83 38.68 2.85
3244 7487 8.219868 TGATAATGAATCTTCCAATGGCTAGAA 58.780 33.333 7.77 0.00 35.45 2.10
3245 7488 7.748677 TGATAATGAATCTTCCAATGGCTAGA 58.251 34.615 6.43 6.43 35.45 2.43
3246 7489 7.991084 TGATAATGAATCTTCCAATGGCTAG 57.009 36.000 0.00 0.00 35.45 3.42
3247 7490 8.945195 ATTGATAATGAATCTTCCAATGGCTA 57.055 30.769 0.00 0.00 35.45 3.93
3248 7491 7.850935 ATTGATAATGAATCTTCCAATGGCT 57.149 32.000 0.00 0.00 35.45 4.75
3249 7492 9.582431 CATATTGATAATGAATCTTCCAATGGC 57.418 33.333 0.00 0.00 35.45 4.40
3274 7517 9.589111 GTTTCAATAGGAAAACAACCTAAAACA 57.411 29.630 0.00 0.00 46.53 2.83
3275 7518 9.589111 TGTTTCAATAGGAAAACAACCTAAAAC 57.411 29.630 0.00 0.00 46.53 2.43
3277 7520 9.757227 CATGTTTCAATAGGAAAACAACCTAAA 57.243 29.630 4.94 0.00 46.53 1.85
3278 7521 7.870445 GCATGTTTCAATAGGAAAACAACCTAA 59.130 33.333 4.94 0.00 46.53 2.69
3279 7522 7.375053 GCATGTTTCAATAGGAAAACAACCTA 58.625 34.615 4.94 0.00 46.53 3.08
3280 7523 6.223120 GCATGTTTCAATAGGAAAACAACCT 58.777 36.000 4.94 0.00 46.53 3.50
3281 7524 5.408299 GGCATGTTTCAATAGGAAAACAACC 59.592 40.000 4.94 6.29 46.53 3.77
3282 7525 6.223120 AGGCATGTTTCAATAGGAAAACAAC 58.777 36.000 4.94 1.61 46.53 3.32
3283 7526 6.418057 AGGCATGTTTCAATAGGAAAACAA 57.582 33.333 4.94 0.00 46.53 2.83
3284 7527 6.491745 TGTAGGCATGTTTCAATAGGAAAACA 59.508 34.615 3.45 3.45 46.53 2.83
3285 7528 6.919721 TGTAGGCATGTTTCAATAGGAAAAC 58.080 36.000 0.00 0.00 46.53 2.43
3286 7529 7.716799 ATGTAGGCATGTTTCAATAGGAAAA 57.283 32.000 0.00 0.00 46.53 2.29
3287 7530 7.716799 AATGTAGGCATGTTTCAATAGGAAA 57.283 32.000 0.00 0.00 38.02 3.13
3288 7531 7.716799 AAATGTAGGCATGTTTCAATAGGAA 57.283 32.000 0.00 0.00 35.15 3.36
3289 7532 7.716799 AAAATGTAGGCATGTTTCAATAGGA 57.283 32.000 0.00 0.00 35.15 2.94
3293 7536 9.723601 ACAATAAAAATGTAGGCATGTTTCAAT 57.276 25.926 0.00 0.00 40.60 2.57
3328 7571 4.334203 AGTCGACACACATTACAGCAAAAA 59.666 37.500 19.50 0.00 0.00 1.94
3329 7572 3.874543 AGTCGACACACATTACAGCAAAA 59.125 39.130 19.50 0.00 0.00 2.44
3330 7573 3.462982 AGTCGACACACATTACAGCAAA 58.537 40.909 19.50 0.00 0.00 3.68
3331 7574 3.057019 GAGTCGACACACATTACAGCAA 58.943 45.455 19.50 0.00 0.00 3.91
3332 7575 2.296190 AGAGTCGACACACATTACAGCA 59.704 45.455 19.50 0.00 0.00 4.41
3333 7576 2.947852 AGAGTCGACACACATTACAGC 58.052 47.619 19.50 0.00 0.00 4.40
3334 7577 5.502214 GAAAGAGTCGACACACATTACAG 57.498 43.478 19.50 0.00 0.00 2.74
3352 7595 8.236084 AGAATTCTTTTGATGCAAATCGAAAG 57.764 30.769 18.34 18.34 46.24 2.62
3353 7596 8.592105 AAGAATTCTTTTGATGCAAATCGAAA 57.408 26.923 15.11 0.00 33.19 3.46
3354 7597 8.592105 AAAGAATTCTTTTGATGCAAATCGAA 57.408 26.923 24.62 0.00 43.07 3.71
3355 7598 7.329226 GGAAAGAATTCTTTTGATGCAAATCGA 59.671 33.333 29.24 0.00 45.37 3.59
3356 7599 7.330208 AGGAAAGAATTCTTTTGATGCAAATCG 59.670 33.333 29.24 0.00 45.37 3.34
3357 7600 8.543862 AGGAAAGAATTCTTTTGATGCAAATC 57.456 30.769 29.24 15.28 45.37 2.17
3358 7601 8.913487 AAGGAAAGAATTCTTTTGATGCAAAT 57.087 26.923 29.24 7.98 45.37 2.32
3359 7602 9.829507 TTAAGGAAAGAATTCTTTTGATGCAAA 57.170 25.926 29.24 16.40 45.37 3.68
3360 7603 9.480053 CTTAAGGAAAGAATTCTTTTGATGCAA 57.520 29.630 29.24 18.28 45.37 4.08
3361 7604 8.859090 TCTTAAGGAAAGAATTCTTTTGATGCA 58.141 29.630 29.24 14.24 45.37 3.96
3362 7605 9.133627 GTCTTAAGGAAAGAATTCTTTTGATGC 57.866 33.333 29.24 18.01 45.78 3.91
3373 7616 6.207614 GTCTGGCAAAGTCTTAAGGAAAGAAT 59.792 38.462 1.85 0.00 45.78 2.40
3374 7617 5.531287 GTCTGGCAAAGTCTTAAGGAAAGAA 59.469 40.000 1.85 0.00 45.78 2.52
3375 7618 5.063880 GTCTGGCAAAGTCTTAAGGAAAGA 58.936 41.667 1.85 0.00 42.07 2.52
3376 7619 4.216472 GGTCTGGCAAAGTCTTAAGGAAAG 59.784 45.833 1.85 0.00 36.45 2.62
3377 7620 4.141251 AGGTCTGGCAAAGTCTTAAGGAAA 60.141 41.667 1.85 0.00 0.00 3.13
3378 7621 3.394606 AGGTCTGGCAAAGTCTTAAGGAA 59.605 43.478 1.85 0.00 0.00 3.36
3379 7622 2.979678 AGGTCTGGCAAAGTCTTAAGGA 59.020 45.455 1.85 0.00 0.00 3.36
3380 7623 3.425162 AGGTCTGGCAAAGTCTTAAGG 57.575 47.619 1.85 0.00 0.00 2.69
3381 7624 7.454260 AATTAAGGTCTGGCAAAGTCTTAAG 57.546 36.000 0.00 0.00 36.80 1.85
3382 7625 7.724061 AGAAATTAAGGTCTGGCAAAGTCTTAA 59.276 33.333 11.56 11.56 37.25 1.85
3383 7626 7.231467 AGAAATTAAGGTCTGGCAAAGTCTTA 58.769 34.615 0.00 0.00 0.00 2.10
3384 7627 6.071320 AGAAATTAAGGTCTGGCAAAGTCTT 58.929 36.000 0.00 0.00 0.00 3.01
3385 7628 5.635120 AGAAATTAAGGTCTGGCAAAGTCT 58.365 37.500 0.00 0.00 0.00 3.24
3386 7629 5.966742 AGAAATTAAGGTCTGGCAAAGTC 57.033 39.130 0.00 0.00 0.00 3.01
3387 7630 6.239317 GGAAAGAAATTAAGGTCTGGCAAAGT 60.239 38.462 0.00 0.00 0.00 2.66
3388 7631 6.159293 GGAAAGAAATTAAGGTCTGGCAAAG 58.841 40.000 0.00 0.00 0.00 2.77
3389 7632 5.278758 CGGAAAGAAATTAAGGTCTGGCAAA 60.279 40.000 0.00 0.00 0.00 3.68
3390 7633 4.217550 CGGAAAGAAATTAAGGTCTGGCAA 59.782 41.667 0.00 0.00 0.00 4.52
3391 7634 3.756434 CGGAAAGAAATTAAGGTCTGGCA 59.244 43.478 0.00 0.00 0.00 4.92
3392 7635 3.756963 ACGGAAAGAAATTAAGGTCTGGC 59.243 43.478 0.00 0.00 0.00 4.85
3393 7636 4.395231 GGACGGAAAGAAATTAAGGTCTGG 59.605 45.833 0.00 0.00 0.00 3.86
3394 7637 5.246307 AGGACGGAAAGAAATTAAGGTCTG 58.754 41.667 0.00 0.00 0.00 3.51
3395 7638 5.489249 GAGGACGGAAAGAAATTAAGGTCT 58.511 41.667 0.00 0.00 0.00 3.85
3396 7639 4.634883 GGAGGACGGAAAGAAATTAAGGTC 59.365 45.833 0.00 0.00 0.00 3.85
3397 7640 4.586884 GGAGGACGGAAAGAAATTAAGGT 58.413 43.478 0.00 0.00 0.00 3.50
3398 7641 3.621715 CGGAGGACGGAAAGAAATTAAGG 59.378 47.826 0.00 0.00 39.42 2.69
3399 7642 3.063588 GCGGAGGACGGAAAGAAATTAAG 59.936 47.826 0.00 0.00 44.51 1.85
3400 7643 3.004862 GCGGAGGACGGAAAGAAATTAA 58.995 45.455 0.00 0.00 44.51 1.40
3401 7644 2.624636 GCGGAGGACGGAAAGAAATTA 58.375 47.619 0.00 0.00 44.51 1.40
3402 7645 1.450025 GCGGAGGACGGAAAGAAATT 58.550 50.000 0.00 0.00 44.51 1.82
3403 7646 0.392595 GGCGGAGGACGGAAAGAAAT 60.393 55.000 0.00 0.00 44.51 2.17
3404 7647 1.004200 GGCGGAGGACGGAAAGAAA 60.004 57.895 0.00 0.00 44.51 2.52
3405 7648 1.885163 GAGGCGGAGGACGGAAAGAA 61.885 60.000 0.00 0.00 44.51 2.52
3406 7649 2.283676 AGGCGGAGGACGGAAAGA 60.284 61.111 0.00 0.00 44.51 2.52
3407 7650 2.184579 GAGGCGGAGGACGGAAAG 59.815 66.667 0.00 0.00 44.51 2.62
3408 7651 2.283676 AGAGGCGGAGGACGGAAA 60.284 61.111 0.00 0.00 44.51 3.13
3409 7652 3.068691 CAGAGGCGGAGGACGGAA 61.069 66.667 0.00 0.00 44.51 4.30
3416 7659 7.529516 ATGATTCTTCATAGCAGAGGCGGAG 62.530 48.000 0.00 0.00 40.87 4.63
3417 7660 5.780804 ATGATTCTTCATAGCAGAGGCGGA 61.781 45.833 0.00 0.00 40.87 5.54
3418 7661 3.556633 ATGATTCTTCATAGCAGAGGCGG 60.557 47.826 0.00 0.00 40.87 6.13
3419 7662 3.432592 CATGATTCTTCATAGCAGAGGCG 59.567 47.826 0.00 0.00 42.21 5.52
3420 7663 3.752222 CCATGATTCTTCATAGCAGAGGC 59.248 47.826 0.00 0.00 40.70 4.70
3421 7664 4.041321 TCCCATGATTCTTCATAGCAGAGG 59.959 45.833 0.00 0.00 40.70 3.69
3422 7665 5.224821 TCCCATGATTCTTCATAGCAGAG 57.775 43.478 0.00 0.00 40.70 3.35
3423 7666 5.635278 TTCCCATGATTCTTCATAGCAGA 57.365 39.130 0.00 0.00 40.70 4.26
3424 7667 6.501781 GTTTTCCCATGATTCTTCATAGCAG 58.498 40.000 0.00 0.00 40.70 4.24
3425 7668 5.066375 CGTTTTCCCATGATTCTTCATAGCA 59.934 40.000 0.00 0.00 40.70 3.49
3426 7669 5.066505 ACGTTTTCCCATGATTCTTCATAGC 59.933 40.000 0.00 0.00 40.70 2.97
3427 7670 6.316140 TGACGTTTTCCCATGATTCTTCATAG 59.684 38.462 0.00 0.00 40.70 2.23
3475 7718 6.726258 TGTATGATTGTACAGAGCAGTTTG 57.274 37.500 0.00 0.00 31.33 2.93
3497 9562 7.386851 TGAGGAGATTAACTAGTCCAAAACTG 58.613 38.462 0.00 0.00 39.11 3.16
3565 10143 3.058224 GCGACAAAGAAGCTATTTGGTGT 60.058 43.478 21.75 7.96 41.05 4.16
3931 10512 0.098200 CAATGGCATGTGACGAGCTG 59.902 55.000 0.00 0.00 0.00 4.24
4305 11042 2.794350 CCGAAAACATTTGCCAAGACAC 59.206 45.455 0.00 0.00 0.00 3.67
4445 11258 5.105756 GGAAAATGTTTACTGAGGGACATGG 60.106 44.000 0.00 0.00 33.35 3.66
4494 11308 2.719739 CACCTGGAGAGCATCATTGTT 58.280 47.619 0.00 0.00 37.82 2.83
4577 11426 0.532862 ATTCGAAGGCGGCGATCATT 60.533 50.000 12.98 0.00 37.64 2.57
4673 13274 6.811170 CAGTCTAAACTCTTCTAAAGCAGAGG 59.189 42.308 10.70 0.00 39.28 3.69
5229 13896 8.103948 ACAGATGCTGCAAGATATTAATTACC 57.896 34.615 6.36 0.00 34.07 2.85
5293 13960 2.348411 AGGGTGACTGGAACAACAAG 57.652 50.000 0.00 0.00 38.70 3.16
5325 13996 0.110373 GCCGTCGAAAGCAAATCGTT 60.110 50.000 3.17 0.00 40.99 3.85
5344 14015 7.062371 CGTTTTCTCTACTTGATCTAGGTGTTG 59.938 40.741 9.03 0.00 0.00 3.33
5345 14016 7.091443 CGTTTTCTCTACTTGATCTAGGTGTT 58.909 38.462 9.03 0.00 0.00 3.32
5346 14017 6.208994 ACGTTTTCTCTACTTGATCTAGGTGT 59.791 38.462 9.03 0.00 0.00 4.16
5347 14018 6.528423 CACGTTTTCTCTACTTGATCTAGGTG 59.472 42.308 9.03 1.42 0.00 4.00
5348 14019 6.433404 TCACGTTTTCTCTACTTGATCTAGGT 59.567 38.462 9.03 0.74 0.00 3.08
5349 14020 6.748198 GTCACGTTTTCTCTACTTGATCTAGG 59.252 42.308 9.03 0.00 0.00 3.02
5350 14021 7.483375 CAGTCACGTTTTCTCTACTTGATCTAG 59.517 40.741 2.37 2.37 0.00 2.43
5351 14022 7.306213 CAGTCACGTTTTCTCTACTTGATCTA 58.694 38.462 0.00 0.00 0.00 1.98
5387 14058 5.358298 AAGTGAAAATCGGTCTAAACAGC 57.642 39.130 0.00 0.00 0.00 4.40
5408 14079 0.673437 GCTGTTGCTTTGCCAGGTAA 59.327 50.000 0.00 0.00 36.03 2.85
5458 14129 9.072375 TCTATGTGGACAGTTTCTGATAGATAG 57.928 37.037 3.70 6.97 35.18 2.08
5507 14206 4.976224 AGCAAAGAACTGTTAACCGTTT 57.024 36.364 15.38 4.81 0.00 3.60
5527 14226 3.390135 TCTACGCAAGACAAGGACAAAG 58.610 45.455 0.00 0.00 43.62 2.77
5544 14244 9.202273 CAAACATGCTAGGATAATCTTCTCTAC 57.798 37.037 0.00 0.00 0.00 2.59
5830 15037 7.438160 CCACCTTTATTCAAGAACAAGAAAACC 59.562 37.037 5.54 0.00 33.80 3.27
5865 15072 2.562738 CCTGAAACATCTGAAAACCCCC 59.437 50.000 0.00 0.00 0.00 5.40
5866 15073 3.230976 ACCTGAAACATCTGAAAACCCC 58.769 45.455 0.00 0.00 0.00 4.95
5867 15074 5.946377 AGATACCTGAAACATCTGAAAACCC 59.054 40.000 0.00 0.00 0.00 4.11
5868 15075 6.431234 ACAGATACCTGAAACATCTGAAAACC 59.569 38.462 15.63 0.00 45.58 3.27
5869 15076 7.173218 TGACAGATACCTGAAACATCTGAAAAC 59.827 37.037 15.63 6.51 45.58 2.43
5876 15083 6.801539 TGTTTGACAGATACCTGAAACATC 57.198 37.500 0.92 0.00 39.80 3.06
5923 15130 0.598065 GTCAACTGCGAAAGGGCATT 59.402 50.000 0.00 0.00 42.99 3.56
5958 15165 6.443934 TGTTACAAAACTTGCTCAGCTTAA 57.556 33.333 0.00 0.00 36.51 1.85
5963 15170 7.754069 TCAAAATGTTACAAAACTTGCTCAG 57.246 32.000 0.00 0.00 36.51 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.