Multiple sequence alignment - TraesCS1A01G365800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G365800 chr1A 100.000 5175 0 0 1 5175 544607494 544602320 0.000000e+00 9557.0
1 TraesCS1A01G365800 chr1D 90.091 3391 134 58 488 3778 449473957 449470669 0.000000e+00 4215.0
2 TraesCS1A01G365800 chr1D 90.573 838 52 13 3829 4655 449470667 449469846 0.000000e+00 1085.0
3 TraesCS1A01G365800 chr1D 85.598 493 43 13 4706 5175 449469840 449469353 4.660000e-135 492.0
4 TraesCS1A01G365800 chr1B 89.688 3394 162 79 488 3780 615129501 615126195 0.000000e+00 4156.0
5 TraesCS1A01G365800 chr1B 93.262 564 28 6 3829 4386 615126195 615125636 0.000000e+00 822.0
6 TraesCS1A01G365800 chr1B 89.937 477 35 8 4706 5174 615125390 615124919 2.060000e-168 603.0
7 TraesCS1A01G365800 chr1B 93.208 265 14 4 1 265 371440234 371439974 2.260000e-103 387.0
8 TraesCS1A01G365800 chr1B 81.538 130 18 5 1843 1971 562712878 562712754 9.170000e-18 102.0
9 TraesCS1A01G365800 chr3D 79.665 895 57 44 601 1433 201169936 201170767 3.550000e-146 529.0
10 TraesCS1A01G365800 chr3D 91.111 45 2 1 4658 4700 599206001 599206045 5.600000e-05 60.2
11 TraesCS1A01G365800 chr4A 97.143 245 7 0 1 245 662081501 662081257 1.040000e-111 414.0
12 TraesCS1A01G365800 chr6B 96.708 243 8 0 1 243 634640385 634640627 6.240000e-109 405.0
13 TraesCS1A01G365800 chr6B 93.333 45 3 0 4655 4699 538817619 538817663 3.340000e-07 67.6
14 TraesCS1A01G365800 chr6A 96.708 243 8 0 1 243 181910092 181909850 6.240000e-109 405.0
15 TraesCS1A01G365800 chr4B 96.356 247 8 1 1 246 40215472 40215226 6.240000e-109 405.0
16 TraesCS1A01G365800 chr4B 96.708 243 8 0 1 243 637631586 637631828 6.240000e-109 405.0
17 TraesCS1A01G365800 chr2B 96.296 243 9 0 1 243 798371697 798371939 2.900000e-107 399.0
18 TraesCS1A01G365800 chr5B 94.882 254 12 1 3 255 141583971 141583718 3.760000e-106 396.0
19 TraesCS1A01G365800 chr5B 81.538 130 18 5 1843 1971 505364982 505365106 9.170000e-18 102.0
20 TraesCS1A01G365800 chr7A 94.208 259 13 2 1 257 4785008 4784750 1.350000e-105 394.0
21 TraesCS1A01G365800 chr3B 81.538 130 18 5 1843 1971 774723339 774723463 9.170000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G365800 chr1A 544602320 544607494 5174 True 9557.000000 9557 100.000000 1 5175 1 chr1A.!!$R1 5174
1 TraesCS1A01G365800 chr1D 449469353 449473957 4604 True 1930.666667 4215 88.754000 488 5175 3 chr1D.!!$R1 4687
2 TraesCS1A01G365800 chr1B 615124919 615129501 4582 True 1860.333333 4156 90.962333 488 5174 3 chr1B.!!$R3 4686
3 TraesCS1A01G365800 chr3D 201169936 201170767 831 False 529.000000 529 79.665000 601 1433 1 chr3D.!!$F1 832

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.0 0.00 0.0 0.00 4.73 F
623 638 0.036164 ATTTCCAGCACGGCAGTACA 59.964 50.0 0.00 0.0 33.14 2.90 F
722 747 0.187361 CCTCCCTCCCCTCTCTACTG 59.813 65.0 0.00 0.0 0.00 2.74 F
723 748 0.187361 CTCCCTCCCCTCTCTACTGG 59.813 65.0 0.00 0.0 0.00 4.00 F
725 750 0.187361 CCCTCCCCTCTCTACTGGAG 59.813 65.0 0.00 0.0 43.29 3.86 F
858 913 0.250770 CCCCGCCCCTAAAATAGCTC 60.251 60.0 0.00 0.0 0.00 4.09 F
2236 2407 0.317160 GCCTTGTTGGTTTAGGGTGC 59.683 55.0 0.00 0.0 38.35 5.01 F
3003 3183 0.521291 GAAAGGTTGCATGTGCGCTA 59.479 50.0 9.73 0.0 45.83 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1210 1304 1.675641 CGGAACCCAGCAAGGAAGG 60.676 63.158 0.00 0.00 41.22 3.46 R
2137 2308 0.037512 AGCTACACAGACAGCAGCAG 60.038 55.000 0.00 0.00 40.36 4.24 R
2261 2432 2.288825 CGAACACTGTAGCTGGAAAGGA 60.289 50.000 0.00 0.00 0.00 3.36 R
2671 2846 2.621055 TGGCACAATGTCAACTTACACC 59.379 45.455 0.00 0.00 31.92 4.16 R
2727 2902 5.500234 AGACTGTGCTCCTAAATTTATGCA 58.500 37.500 13.22 13.22 0.00 3.96 R
2823 3002 1.405391 GGCGGTGGCTGCAAAAATATT 60.405 47.619 0.50 0.00 37.51 1.28 R
3785 3968 0.111253 AGGGGTTGCAAGAGTGAAGG 59.889 55.000 0.00 0.00 0.00 3.46 R
4765 4970 0.096454 GCCGACGAATTAACCACTGC 59.904 55.000 0.00 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.301505 TCAAATCCTGGTGCTCGC 57.698 55.556 0.00 0.00 0.00 5.03
18 19 1.374568 TCAAATCCTGGTGCTCGCA 59.625 52.632 0.00 0.00 0.00 5.10
19 20 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
20 21 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
21 22 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
22 23 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
23 24 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
24 25 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
25 26 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
26 27 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
27 28 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
28 29 0.308993 GGTGCTCGCATTATTCCTGC 59.691 55.000 0.00 0.00 36.26 4.85
29 30 1.016627 GTGCTCGCATTATTCCTGCA 58.983 50.000 0.00 0.00 39.64 4.41
30 31 1.605710 GTGCTCGCATTATTCCTGCAT 59.394 47.619 0.00 0.00 39.64 3.96
31 32 2.033801 GTGCTCGCATTATTCCTGCATT 59.966 45.455 0.00 0.00 39.64 3.56
32 33 2.689471 TGCTCGCATTATTCCTGCATTT 59.311 40.909 0.00 0.00 39.64 2.32
33 34 3.882288 TGCTCGCATTATTCCTGCATTTA 59.118 39.130 0.00 0.00 39.64 1.40
34 35 4.520111 TGCTCGCATTATTCCTGCATTTAT 59.480 37.500 0.00 0.00 39.64 1.40
35 36 5.009911 TGCTCGCATTATTCCTGCATTTATT 59.990 36.000 0.00 0.00 39.64 1.40
36 37 5.922544 GCTCGCATTATTCCTGCATTTATTT 59.077 36.000 0.00 0.00 39.64 1.40
37 38 6.088616 GCTCGCATTATTCCTGCATTTATTTC 59.911 38.462 0.00 0.00 39.64 2.17
38 39 7.036996 TCGCATTATTCCTGCATTTATTTCA 57.963 32.000 0.00 0.00 39.64 2.69
39 40 7.140705 TCGCATTATTCCTGCATTTATTTCAG 58.859 34.615 0.00 0.00 39.64 3.02
40 41 6.364165 CGCATTATTCCTGCATTTATTTCAGG 59.636 38.462 1.29 1.29 46.60 3.86
48 49 5.261209 TGCATTTATTTCAGGATTTCCGG 57.739 39.130 0.00 0.00 42.08 5.14
49 50 4.051237 GCATTTATTTCAGGATTTCCGGC 58.949 43.478 0.00 0.00 42.08 6.13
50 51 4.290155 CATTTATTTCAGGATTTCCGGCG 58.710 43.478 0.00 0.00 42.08 6.46
51 52 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
52 53 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
53 54 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
54 55 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
55 56 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
66 67 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
67 68 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
68 69 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
69 70 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
70 71 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
71 72 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
72 73 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
73 74 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
74 75 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
75 76 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
76 77 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
77 78 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
100 101 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
103 104 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
105 106 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
108 109 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
109 110 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
110 111 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
111 112 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
112 113 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
113 114 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
114 115 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
115 116 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
116 117 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
117 118 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
118 119 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
119 120 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
120 121 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
121 122 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
122 123 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
123 124 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
124 125 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
125 126 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
126 127 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
127 128 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
128 129 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
129 130 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
130 131 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
131 132 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
132 133 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
133 134 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
134 135 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
135 136 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
136 137 1.073964 CAAGATGATATGCCGGCTCG 58.926 55.000 29.70 0.00 0.00 5.03
160 161 3.142393 CGGAGGTGCTCATAGGGG 58.858 66.667 0.00 0.00 31.08 4.79
161 162 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
162 163 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
163 164 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
164 165 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
165 166 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
166 167 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
167 168 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
168 169 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
169 170 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
170 171 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
171 172 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
172 173 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
173 174 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
174 175 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
175 176 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
176 177 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
177 178 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
178 179 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
181 182 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
182 183 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
183 184 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
184 185 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
185 186 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
186 187 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
187 188 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
188 189 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
189 190 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
190 191 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
191 192 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
192 193 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
193 194 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
194 195 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
195 196 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
196 197 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
197 198 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
198 199 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
199 200 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
200 201 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
201 202 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
202 203 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
203 204 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
204 205 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
205 206 1.140161 GGGTGAGTGTATGCGCGTA 59.860 57.895 8.43 4.92 0.00 4.42
206 207 0.249322 GGGTGAGTGTATGCGCGTAT 60.249 55.000 15.52 15.52 0.00 3.06
207 208 1.001048 GGGTGAGTGTATGCGCGTATA 60.001 52.381 13.13 13.13 0.00 1.47
208 209 2.352421 GGGTGAGTGTATGCGCGTATAT 60.352 50.000 19.79 4.31 0.00 0.86
209 210 3.119743 GGGTGAGTGTATGCGCGTATATA 60.120 47.826 19.79 14.59 0.00 0.86
210 211 4.439700 GGGTGAGTGTATGCGCGTATATAT 60.440 45.833 19.79 9.03 0.00 0.86
211 212 4.499399 GGTGAGTGTATGCGCGTATATATG 59.501 45.833 19.79 0.00 0.00 1.78
212 213 5.329493 GTGAGTGTATGCGCGTATATATGA 58.671 41.667 19.79 3.29 0.00 2.15
213 214 5.452623 GTGAGTGTATGCGCGTATATATGAG 59.547 44.000 19.79 3.76 0.00 2.90
214 215 4.352039 AGTGTATGCGCGTATATATGAGC 58.648 43.478 19.79 20.14 38.31 4.26
221 222 2.459324 CGCGTATATATGAGCGCTTACG 59.541 50.000 25.10 25.10 46.56 3.18
222 223 3.423571 GCGTATATATGAGCGCTTACGT 58.576 45.455 27.84 15.23 45.48 3.57
223 224 3.477802 GCGTATATATGAGCGCTTACGTC 59.522 47.826 27.84 19.83 45.48 4.34
224 225 4.727162 GCGTATATATGAGCGCTTACGTCT 60.727 45.833 27.84 8.29 45.48 4.18
225 226 4.724334 CGTATATATGAGCGCTTACGTCTG 59.276 45.833 22.50 3.02 42.83 3.51
226 227 4.768130 ATATATGAGCGCTTACGTCTGT 57.232 40.909 13.26 0.00 42.83 3.41
227 228 5.874895 ATATATGAGCGCTTACGTCTGTA 57.125 39.130 13.26 0.00 42.83 2.74
228 229 2.190325 ATGAGCGCTTACGTCTGTAC 57.810 50.000 13.26 0.00 42.83 2.90
229 230 1.162698 TGAGCGCTTACGTCTGTACT 58.837 50.000 13.26 0.00 42.83 2.73
230 231 1.135774 TGAGCGCTTACGTCTGTACTG 60.136 52.381 13.26 0.00 42.83 2.74
231 232 1.129998 GAGCGCTTACGTCTGTACTGA 59.870 52.381 13.26 0.00 42.83 3.41
232 233 1.743958 AGCGCTTACGTCTGTACTGAT 59.256 47.619 2.64 0.00 42.83 2.90
233 234 1.846782 GCGCTTACGTCTGTACTGATG 59.153 52.381 17.63 17.63 42.83 3.07
234 235 1.846782 CGCTTACGTCTGTACTGATGC 59.153 52.381 18.79 11.21 33.53 3.91
235 236 2.478031 CGCTTACGTCTGTACTGATGCT 60.478 50.000 18.79 10.55 33.53 3.79
236 237 3.242641 CGCTTACGTCTGTACTGATGCTA 60.243 47.826 18.79 9.77 33.53 3.49
237 238 4.669318 GCTTACGTCTGTACTGATGCTAA 58.331 43.478 18.79 14.84 0.00 3.09
238 239 5.100259 GCTTACGTCTGTACTGATGCTAAA 58.900 41.667 18.79 11.36 0.00 1.85
239 240 5.575606 GCTTACGTCTGTACTGATGCTAAAA 59.424 40.000 18.79 9.45 0.00 1.52
240 241 6.090358 GCTTACGTCTGTACTGATGCTAAAAA 59.910 38.462 18.79 7.58 0.00 1.94
258 259 2.316119 AAAACATCTTTCGAGCACGC 57.684 45.000 0.00 0.00 39.58 5.34
259 260 0.517316 AAACATCTTTCGAGCACGCC 59.483 50.000 0.00 0.00 39.58 5.68
260 261 1.298859 AACATCTTTCGAGCACGCCC 61.299 55.000 0.00 0.00 39.58 6.13
261 262 2.125106 ATCTTTCGAGCACGCCCC 60.125 61.111 0.00 0.00 39.58 5.80
262 263 4.735132 TCTTTCGAGCACGCCCCG 62.735 66.667 0.00 0.00 39.58 5.73
268 269 4.814294 GAGCACGCCCCGTCGATT 62.814 66.667 0.00 0.00 38.32 3.34
269 270 3.420214 GAGCACGCCCCGTCGATTA 62.420 63.158 0.00 0.00 38.32 1.75
270 271 2.509786 GCACGCCCCGTCGATTAA 60.510 61.111 0.00 0.00 38.32 1.40
271 272 2.805807 GCACGCCCCGTCGATTAAC 61.806 63.158 0.00 0.00 38.32 2.01
272 273 1.446445 CACGCCCCGTCGATTAACA 60.446 57.895 0.00 0.00 38.32 2.41
273 274 1.446618 ACGCCCCGTCGATTAACAC 60.447 57.895 0.00 0.00 33.69 3.32
274 275 2.510594 CGCCCCGTCGATTAACACG 61.511 63.158 0.00 0.00 35.72 4.49
275 276 1.446618 GCCCCGTCGATTAACACGT 60.447 57.895 0.00 0.00 34.06 4.49
276 277 1.015607 GCCCCGTCGATTAACACGTT 61.016 55.000 0.00 0.00 34.06 3.99
277 278 1.735369 GCCCCGTCGATTAACACGTTA 60.735 52.381 0.00 0.00 34.06 3.18
278 279 2.605030 CCCCGTCGATTAACACGTTAA 58.395 47.619 4.93 4.93 39.12 2.01
279 280 2.992543 CCCCGTCGATTAACACGTTAAA 59.007 45.455 6.47 0.00 38.38 1.52
280 281 3.181531 CCCCGTCGATTAACACGTTAAAC 60.182 47.826 6.47 3.60 38.38 2.01
281 282 3.181531 CCCGTCGATTAACACGTTAAACC 60.182 47.826 6.47 2.05 38.38 3.27
282 283 3.181531 CCGTCGATTAACACGTTAAACCC 60.182 47.826 6.47 0.00 38.38 4.11
283 284 3.674753 CGTCGATTAACACGTTAAACCCT 59.325 43.478 6.47 0.00 38.38 4.34
284 285 4.150451 CGTCGATTAACACGTTAAACCCTT 59.850 41.667 6.47 0.00 38.38 3.95
285 286 5.333263 CGTCGATTAACACGTTAAACCCTTT 60.333 40.000 6.47 0.00 38.38 3.11
286 287 6.429624 GTCGATTAACACGTTAAACCCTTTT 58.570 36.000 6.47 0.00 38.38 2.27
287 288 6.912051 GTCGATTAACACGTTAAACCCTTTTT 59.088 34.615 6.47 0.00 38.38 1.94
288 289 8.067189 GTCGATTAACACGTTAAACCCTTTTTA 58.933 33.333 6.47 0.00 38.38 1.52
289 290 8.067189 TCGATTAACACGTTAAACCCTTTTTAC 58.933 33.333 6.47 0.00 38.38 2.01
291 292 5.809719 AACACGTTAAACCCTTTTTACGA 57.190 34.783 13.64 0.00 45.94 3.43
292 293 5.809719 ACACGTTAAACCCTTTTTACGAA 57.190 34.783 13.64 0.00 45.94 3.85
293 294 6.188400 ACACGTTAAACCCTTTTTACGAAA 57.812 33.333 13.64 0.00 45.94 3.46
294 295 6.616017 ACACGTTAAACCCTTTTTACGAAAA 58.384 32.000 13.64 0.00 45.94 2.29
295 296 7.087007 ACACGTTAAACCCTTTTTACGAAAAA 58.913 30.769 13.64 0.00 45.94 1.94
330 331 7.662604 TTTTTCCTACATTTAGTTCTCGACC 57.337 36.000 0.00 0.00 0.00 4.79
331 332 5.988310 TTCCTACATTTAGTTCTCGACCA 57.012 39.130 0.00 0.00 0.00 4.02
332 333 5.578005 TCCTACATTTAGTTCTCGACCAG 57.422 43.478 0.00 0.00 0.00 4.00
333 334 4.113354 CCTACATTTAGTTCTCGACCAGC 58.887 47.826 0.00 0.00 0.00 4.85
334 335 2.607187 ACATTTAGTTCTCGACCAGCG 58.393 47.619 0.00 0.00 42.69 5.18
353 354 3.294088 CGAAGTAAACGCCCGTAATTC 57.706 47.619 0.00 0.00 0.00 2.17
354 355 2.667481 CGAAGTAAACGCCCGTAATTCA 59.333 45.455 0.00 0.00 0.00 2.57
355 356 3.307782 CGAAGTAAACGCCCGTAATTCAT 59.692 43.478 0.00 0.00 0.00 2.57
356 357 4.201744 CGAAGTAAACGCCCGTAATTCATT 60.202 41.667 0.00 0.00 0.00 2.57
357 358 4.870221 AGTAAACGCCCGTAATTCATTC 57.130 40.909 0.00 0.00 0.00 2.67
358 359 4.255301 AGTAAACGCCCGTAATTCATTCA 58.745 39.130 0.00 0.00 0.00 2.57
359 360 4.879545 AGTAAACGCCCGTAATTCATTCAT 59.120 37.500 0.00 0.00 0.00 2.57
360 361 3.963383 AACGCCCGTAATTCATTCATC 57.037 42.857 0.00 0.00 0.00 2.92
361 362 2.218603 ACGCCCGTAATTCATTCATCC 58.781 47.619 0.00 0.00 0.00 3.51
362 363 2.217750 CGCCCGTAATTCATTCATCCA 58.782 47.619 0.00 0.00 0.00 3.41
363 364 2.813754 CGCCCGTAATTCATTCATCCAT 59.186 45.455 0.00 0.00 0.00 3.41
364 365 3.253188 CGCCCGTAATTCATTCATCCATT 59.747 43.478 0.00 0.00 0.00 3.16
365 366 4.613622 CGCCCGTAATTCATTCATCCATTC 60.614 45.833 0.00 0.00 0.00 2.67
366 367 4.278170 GCCCGTAATTCATTCATCCATTCA 59.722 41.667 0.00 0.00 0.00 2.57
367 368 5.221224 GCCCGTAATTCATTCATCCATTCAA 60.221 40.000 0.00 0.00 0.00 2.69
368 369 6.682611 GCCCGTAATTCATTCATCCATTCAAA 60.683 38.462 0.00 0.00 0.00 2.69
369 370 6.697019 CCCGTAATTCATTCATCCATTCAAAC 59.303 38.462 0.00 0.00 0.00 2.93
370 371 7.257003 CCGTAATTCATTCATCCATTCAAACA 58.743 34.615 0.00 0.00 0.00 2.83
371 372 7.220683 CCGTAATTCATTCATCCATTCAAACAC 59.779 37.037 0.00 0.00 0.00 3.32
372 373 7.044771 CGTAATTCATTCATCCATTCAAACACG 60.045 37.037 0.00 0.00 0.00 4.49
373 374 4.700268 TCATTCATCCATTCAAACACGG 57.300 40.909 0.00 0.00 0.00 4.94
374 375 3.119531 TCATTCATCCATTCAAACACGGC 60.120 43.478 0.00 0.00 0.00 5.68
375 376 1.902938 TCATCCATTCAAACACGGCA 58.097 45.000 0.00 0.00 0.00 5.69
376 377 2.445427 TCATCCATTCAAACACGGCAT 58.555 42.857 0.00 0.00 0.00 4.40
377 378 2.164017 TCATCCATTCAAACACGGCATG 59.836 45.455 0.00 0.00 0.00 4.06
378 379 1.614996 TCCATTCAAACACGGCATGT 58.385 45.000 0.00 0.00 46.42 3.21
388 389 2.356135 ACACGGCATGTTGATTAGTCC 58.644 47.619 0.00 0.00 38.98 3.85
389 390 1.327460 CACGGCATGTTGATTAGTCCG 59.673 52.381 0.00 0.00 40.98 4.79
390 391 1.066430 ACGGCATGTTGATTAGTCCGT 60.066 47.619 2.91 2.91 43.04 4.69
391 392 1.327460 CGGCATGTTGATTAGTCCGTG 59.673 52.381 0.00 0.00 0.00 4.94
392 393 1.064060 GGCATGTTGATTAGTCCGTGC 59.936 52.381 0.00 0.00 0.00 5.34
393 394 1.737236 GCATGTTGATTAGTCCGTGCA 59.263 47.619 0.00 0.00 0.00 4.57
394 395 2.476185 GCATGTTGATTAGTCCGTGCAC 60.476 50.000 6.82 6.82 0.00 4.57
395 396 2.535012 TGTTGATTAGTCCGTGCACA 57.465 45.000 18.64 0.00 0.00 4.57
396 397 3.052455 TGTTGATTAGTCCGTGCACAT 57.948 42.857 18.64 0.53 0.00 3.21
397 398 2.741517 TGTTGATTAGTCCGTGCACATG 59.258 45.455 18.64 7.38 0.00 3.21
398 399 2.022764 TGATTAGTCCGTGCACATGG 57.977 50.000 18.64 11.17 38.85 3.66
399 400 0.657840 GATTAGTCCGTGCACATGGC 59.342 55.000 18.64 8.85 45.13 4.40
410 411 2.126463 ACATGGCGTGACGAGACG 60.126 61.111 14.82 6.61 42.42 4.18
411 412 2.178273 CATGGCGTGACGAGACGA 59.822 61.111 10.10 0.00 42.10 4.20
412 413 1.226688 CATGGCGTGACGAGACGAT 60.227 57.895 10.10 0.00 42.10 3.73
413 414 1.064296 ATGGCGTGACGAGACGATC 59.936 57.895 10.10 6.52 42.10 3.69
427 428 6.585096 CGAGACGATCGTAGATAAATTCAC 57.415 41.667 22.79 3.78 46.62 3.18
428 429 6.134061 CGAGACGATCGTAGATAAATTCACA 58.866 40.000 22.79 0.00 46.62 3.58
429 430 6.631636 CGAGACGATCGTAGATAAATTCACAA 59.368 38.462 22.79 0.00 46.62 3.33
430 431 7.356557 CGAGACGATCGTAGATAAATTCACAAC 60.357 40.741 22.79 2.38 46.62 3.32
431 432 6.414109 AGACGATCGTAGATAAATTCACAACG 59.586 38.462 22.79 0.00 45.12 4.10
432 433 5.051907 ACGATCGTAGATAAATTCACAACGC 60.052 40.000 21.32 0.00 45.12 4.84
433 434 5.051973 CGATCGTAGATAAATTCACAACGCA 60.052 40.000 7.03 0.00 45.12 5.24
434 435 6.507299 CGATCGTAGATAAATTCACAACGCAA 60.507 38.462 7.03 0.00 45.12 4.85
435 436 6.705782 ATCGTAGATAAATTCACAACGCAAG 58.294 36.000 0.00 0.00 45.12 4.01
458 459 4.868450 CGAGTAAGTCGTCTCTCAGATT 57.132 45.455 0.00 0.00 44.20 2.40
459 460 5.224562 CGAGTAAGTCGTCTCTCAGATTT 57.775 43.478 0.00 0.00 44.20 2.17
460 461 5.260140 CGAGTAAGTCGTCTCTCAGATTTC 58.740 45.833 0.00 0.00 44.20 2.17
461 462 5.570234 AGTAAGTCGTCTCTCAGATTTCC 57.430 43.478 0.00 0.00 0.00 3.13
462 463 3.878160 AAGTCGTCTCTCAGATTTCCC 57.122 47.619 0.00 0.00 0.00 3.97
463 464 3.094484 AGTCGTCTCTCAGATTTCCCT 57.906 47.619 0.00 0.00 0.00 4.20
464 465 3.436243 AGTCGTCTCTCAGATTTCCCTT 58.564 45.455 0.00 0.00 0.00 3.95
465 466 3.835395 AGTCGTCTCTCAGATTTCCCTTT 59.165 43.478 0.00 0.00 0.00 3.11
466 467 3.929610 GTCGTCTCTCAGATTTCCCTTTG 59.070 47.826 0.00 0.00 0.00 2.77
467 468 3.578716 TCGTCTCTCAGATTTCCCTTTGT 59.421 43.478 0.00 0.00 0.00 2.83
468 469 4.770531 TCGTCTCTCAGATTTCCCTTTGTA 59.229 41.667 0.00 0.00 0.00 2.41
469 470 5.105716 TCGTCTCTCAGATTTCCCTTTGTAG 60.106 44.000 0.00 0.00 0.00 2.74
470 471 5.105716 CGTCTCTCAGATTTCCCTTTGTAGA 60.106 44.000 0.00 0.00 0.00 2.59
471 472 6.572509 CGTCTCTCAGATTTCCCTTTGTAGAA 60.573 42.308 0.00 0.00 0.00 2.10
472 473 6.592220 GTCTCTCAGATTTCCCTTTGTAGAAC 59.408 42.308 0.00 0.00 0.00 3.01
473 474 6.270000 TCTCTCAGATTTCCCTTTGTAGAACA 59.730 38.462 0.00 0.00 0.00 3.18
474 475 6.837312 TCTCAGATTTCCCTTTGTAGAACAA 58.163 36.000 0.00 0.00 36.11 2.83
475 476 7.287061 TCTCAGATTTCCCTTTGTAGAACAAA 58.713 34.615 5.22 5.22 44.91 2.83
476 477 7.777910 TCTCAGATTTCCCTTTGTAGAACAAAA 59.222 33.333 6.67 0.00 46.15 2.44
477 478 7.940850 TCAGATTTCCCTTTGTAGAACAAAAG 58.059 34.615 6.67 1.19 46.15 2.27
478 479 7.559897 TCAGATTTCCCTTTGTAGAACAAAAGT 59.440 33.333 6.67 0.00 46.15 2.66
479 480 8.197439 CAGATTTCCCTTTGTAGAACAAAAGTT 58.803 33.333 6.67 0.00 46.15 2.66
480 481 9.416284 AGATTTCCCTTTGTAGAACAAAAGTTA 57.584 29.630 6.67 0.00 46.15 2.24
481 482 9.459640 GATTTCCCTTTGTAGAACAAAAGTTAC 57.540 33.333 6.67 0.00 46.15 2.50
482 483 8.584063 TTTCCCTTTGTAGAACAAAAGTTACT 57.416 30.769 6.67 0.00 46.15 2.24
483 484 9.683870 TTTCCCTTTGTAGAACAAAAGTTACTA 57.316 29.630 6.67 0.00 46.15 1.82
484 485 8.667076 TCCCTTTGTAGAACAAAAGTTACTAC 57.333 34.615 6.67 0.00 46.15 2.73
485 486 8.488668 TCCCTTTGTAGAACAAAAGTTACTACT 58.511 33.333 6.67 0.00 46.15 2.57
486 487 8.557029 CCCTTTGTAGAACAAAAGTTACTACTG 58.443 37.037 6.67 0.00 46.15 2.74
534 535 1.751349 AAGCAAAGGCCAACCAGCTG 61.751 55.000 6.78 6.78 39.72 4.24
570 571 1.921887 CGAACGCGCTGGAAAACTATA 59.078 47.619 5.73 0.00 0.00 1.31
571 572 2.346244 CGAACGCGCTGGAAAACTATAA 59.654 45.455 5.73 0.00 0.00 0.98
573 574 4.667161 CGAACGCGCTGGAAAACTATAAAA 60.667 41.667 5.73 0.00 0.00 1.52
574 575 4.957759 ACGCGCTGGAAAACTATAAAAT 57.042 36.364 5.73 0.00 0.00 1.82
575 576 5.305139 ACGCGCTGGAAAACTATAAAATT 57.695 34.783 5.73 0.00 0.00 1.82
620 635 0.314935 CAAATTTCCAGCACGGCAGT 59.685 50.000 0.00 0.00 33.14 4.40
622 637 1.165270 AATTTCCAGCACGGCAGTAC 58.835 50.000 0.00 0.00 33.14 2.73
623 638 0.036164 ATTTCCAGCACGGCAGTACA 59.964 50.000 0.00 0.00 33.14 2.90
625 640 1.468506 TTCCAGCACGGCAGTACAGA 61.469 55.000 0.00 0.00 33.14 3.41
626 641 1.005037 CCAGCACGGCAGTACAGAA 60.005 57.895 0.00 0.00 0.00 3.02
659 676 3.759828 CGCACGAAACGGACGGAC 61.760 66.667 0.00 0.00 34.93 4.79
663 680 3.467119 CGAAACGGACGGACGCTG 61.467 66.667 0.77 0.00 37.37 5.18
664 681 2.355481 GAAACGGACGGACGCTGT 60.355 61.111 0.77 0.00 37.37 4.40
666 683 1.883725 GAAACGGACGGACGCTGTTC 61.884 60.000 11.59 0.23 33.93 3.18
667 684 4.695231 ACGGACGGACGCTGTTCG 62.695 66.667 15.15 15.15 46.17 3.95
714 739 4.761304 TCCCTCCCTCCCTCCCCT 62.761 72.222 0.00 0.00 0.00 4.79
719 744 0.703056 CTCCCTCCCTCCCCTCTCTA 60.703 65.000 0.00 0.00 0.00 2.43
722 747 0.187361 CCTCCCTCCCCTCTCTACTG 59.813 65.000 0.00 0.00 0.00 2.74
723 748 0.187361 CTCCCTCCCCTCTCTACTGG 59.813 65.000 0.00 0.00 0.00 4.00
724 749 0.254154 TCCCTCCCCTCTCTACTGGA 60.254 60.000 0.00 0.00 0.00 3.86
725 750 0.187361 CCCTCCCCTCTCTACTGGAG 59.813 65.000 0.00 0.00 43.29 3.86
856 911 1.901948 GCCCCGCCCCTAAAATAGC 60.902 63.158 0.00 0.00 0.00 2.97
857 912 1.844130 CCCCGCCCCTAAAATAGCT 59.156 57.895 0.00 0.00 0.00 3.32
858 913 0.250770 CCCCGCCCCTAAAATAGCTC 60.251 60.000 0.00 0.00 0.00 4.09
859 914 0.250770 CCCGCCCCTAAAATAGCTCC 60.251 60.000 0.00 0.00 0.00 4.70
860 915 0.602905 CCGCCCCTAAAATAGCTCCG 60.603 60.000 0.00 0.00 0.00 4.63
861 916 1.228657 CGCCCCTAAAATAGCTCCGC 61.229 60.000 0.00 0.00 0.00 5.54
862 917 1.228657 GCCCCTAAAATAGCTCCGCG 61.229 60.000 0.00 0.00 0.00 6.46
863 918 1.228657 CCCCTAAAATAGCTCCGCGC 61.229 60.000 0.00 0.00 39.57 6.86
926 981 3.898509 CTCCTCTCTCCCAGCGCG 61.899 72.222 0.00 0.00 0.00 6.86
1151 1229 1.527370 GCGTAATGCTCCCTTCCCT 59.473 57.895 0.00 0.00 41.73 4.20
1291 1407 1.728490 GGGTGGGAGCGCAATCAATC 61.728 60.000 11.47 0.00 0.00 2.67
1308 1424 5.521906 TCAATCTGGCTTGCTAGTAGTAG 57.478 43.478 5.91 0.00 0.00 2.57
1310 1426 4.927978 ATCTGGCTTGCTAGTAGTAGTG 57.072 45.455 6.47 0.00 0.00 2.74
1311 1427 2.427453 TCTGGCTTGCTAGTAGTAGTGC 59.573 50.000 6.47 8.21 0.00 4.40
1312 1428 1.134367 TGGCTTGCTAGTAGTAGTGCG 59.866 52.381 6.47 0.00 0.00 5.34
1313 1429 1.201343 GCTTGCTAGTAGTAGTGCGC 58.799 55.000 0.00 0.00 0.00 6.09
1387 1541 6.234177 AGGCTGGATCATATTTAGCAAGTAC 58.766 40.000 0.00 0.00 36.15 2.73
1394 1555 8.560374 GGATCATATTTAGCAAGTACAGAAACC 58.440 37.037 0.00 0.00 0.00 3.27
1428 1589 4.811557 GCTCCTGCACAGTTAATAAGTAGG 59.188 45.833 0.00 0.00 39.41 3.18
1460 1625 1.820519 TCCAATTGCAAGTGATCTGCC 59.179 47.619 27.27 0.00 0.00 4.85
1485 1650 2.277969 GGCCGTTCTAGGTTTAAGAGC 58.722 52.381 0.00 0.00 0.00 4.09
1494 1659 6.374417 TCTAGGTTTAAGAGCAAGATGGTT 57.626 37.500 0.00 0.00 0.00 3.67
1564 1732 7.536964 TCAAATACGTCGTAATCGTTTCTGTTA 59.463 33.333 9.52 0.00 41.72 2.41
1587 1755 6.487689 AGATTCAAATTCTTCGAAGTGGAC 57.512 37.500 23.85 10.02 0.00 4.02
1593 1761 9.496873 TTCAAATTCTTCGAAGTGGACTATTAA 57.503 29.630 23.85 8.63 0.00 1.40
1594 1762 9.667107 TCAAATTCTTCGAAGTGGACTATTAAT 57.333 29.630 23.85 10.49 0.00 1.40
1598 1766 8.842358 TTCTTCGAAGTGGACTATTAATTTGT 57.158 30.769 23.85 0.00 0.00 2.83
1599 1767 8.842358 TCTTCGAAGTGGACTATTAATTTGTT 57.158 30.769 23.85 0.00 0.00 2.83
1600 1768 9.932207 TCTTCGAAGTGGACTATTAATTTGTTA 57.068 29.630 23.85 0.00 0.00 2.41
1690 1858 5.008911 TGTCATTAATGTGTAGGCATGATGC 59.991 40.000 9.33 9.33 44.08 3.91
1696 1864 2.092267 TGTGTAGGCATGATGCTGGATT 60.092 45.455 17.84 1.29 44.28 3.01
1718 1886 7.587392 GGATTTTGCATGCTGTTTTTACTTTTC 59.413 33.333 20.33 0.00 0.00 2.29
1772 1942 4.630505 CAGACAGAGACTGGATGAACAATG 59.369 45.833 0.00 0.00 35.51 2.82
1803 1973 9.733556 TCTTATTGGTTCAGTTCTGCTATTTTA 57.266 29.630 0.00 0.00 0.00 1.52
1806 1976 7.575414 TTGGTTCAGTTCTGCTATTTTAACA 57.425 32.000 0.00 0.00 0.00 2.41
1807 1977 7.759489 TGGTTCAGTTCTGCTATTTTAACAT 57.241 32.000 0.00 0.00 0.00 2.71
1880 2051 2.224161 GGAGGTGAGGAGATGAATTCGG 60.224 54.545 0.04 0.00 0.00 4.30
1898 2069 2.370849 TCGGGCTACAGGTTTTCTTCTT 59.629 45.455 0.00 0.00 0.00 2.52
1903 2074 6.470278 GGGCTACAGGTTTTCTTCTTAAGTA 58.530 40.000 1.63 0.00 0.00 2.24
1932 2103 3.521947 AGAAGCTACCGCGTTTCTAAT 57.478 42.857 4.92 0.00 42.32 1.73
1934 2105 3.130693 AGAAGCTACCGCGTTTCTAATCT 59.869 43.478 4.92 0.00 42.32 2.40
2022 2193 2.005971 AAGGCGTCGATGTTCTTACC 57.994 50.000 6.48 0.00 0.00 2.85
2108 2279 2.811431 CAGTGTTGCTCCGGTGAATTTA 59.189 45.455 7.92 0.00 0.00 1.40
2109 2280 3.440173 CAGTGTTGCTCCGGTGAATTTAT 59.560 43.478 7.92 0.00 0.00 1.40
2137 2308 3.134623 CCAAAATTGGCCCCCTTAAGATC 59.865 47.826 3.36 0.00 42.21 2.75
2236 2407 0.317160 GCCTTGTTGGTTTAGGGTGC 59.683 55.000 0.00 0.00 38.35 5.01
2261 2432 7.255486 GCCTCAGGTTAGTGAAAACTAAATTGT 60.255 37.037 0.00 0.00 31.55 2.71
2282 2453 2.069273 CCTTTCCAGCTACAGTGTTCG 58.931 52.381 0.00 0.00 0.00 3.95
2301 2472 5.963004 TGTTCGAAAAACTCATTTGTCTTCG 59.037 36.000 0.00 0.00 30.71 3.79
2335 2506 5.165961 TCTGTAGTCCCTTCTTTCCAATG 57.834 43.478 0.00 0.00 0.00 2.82
2390 2561 7.362142 CCTTTTCTGATAAACTAGGTTGGCTTC 60.362 40.741 2.38 0.00 0.00 3.86
2503 2678 7.764443 TCTCCTTGATTTATTCAACGAGGTAAG 59.236 37.037 12.36 0.00 42.77 2.34
2506 2681 8.601476 CCTTGATTTATTCAACGAGGTAAGTAC 58.399 37.037 0.00 0.00 39.44 2.73
2507 2682 9.146984 CTTGATTTATTCAACGAGGTAAGTACA 57.853 33.333 0.00 0.00 39.44 2.90
2508 2683 9.661563 TTGATTTATTCAACGAGGTAAGTACAT 57.338 29.630 0.00 0.00 39.44 2.29
2681 2856 7.913297 CGAAATATAACATTGGGGTGTAAGTTG 59.087 37.037 0.00 0.00 0.00 3.16
2683 2858 7.875327 ATATAACATTGGGGTGTAAGTTGAC 57.125 36.000 0.00 0.00 0.00 3.18
2684 2859 3.586470 ACATTGGGGTGTAAGTTGACA 57.414 42.857 0.00 0.00 0.00 3.58
2727 2902 4.256920 ACTTCTTTAGCATGCTTCATCGT 58.743 39.130 28.02 13.30 0.00 3.73
2752 2931 6.094048 TGCATAAATTTAGGAGCACAGTCTTC 59.906 38.462 13.79 0.00 0.00 2.87
2754 2933 7.148171 GCATAAATTTAGGAGCACAGTCTTCTT 60.148 37.037 13.79 0.00 0.00 2.52
2759 2938 3.891049 AGGAGCACAGTCTTCTTTTGTT 58.109 40.909 0.00 0.00 0.00 2.83
3003 3183 0.521291 GAAAGGTTGCATGTGCGCTA 59.479 50.000 9.73 0.00 45.83 4.26
3283 3465 9.315525 TGAATGGCAATTGTTATATTGTTGATG 57.684 29.630 7.40 0.00 37.72 3.07
3326 3508 8.358895 TGCAATTTGATCAATGTTGAGTCTTAA 58.641 29.630 26.02 4.66 41.08 1.85
3390 3572 1.141657 AGTTGTCCAAGCTCTTGAGCA 59.858 47.619 22.44 6.59 42.93 4.26
3424 3606 6.886459 AGAGCCAAAAGAGCATTCTATTTGTA 59.114 34.615 0.00 0.00 34.32 2.41
3437 3619 5.856126 TCTATTTGTAAGTCACCTTTGCG 57.144 39.130 0.00 0.00 31.89 4.85
3451 3633 1.000274 CTTTGCGCTACTTTGCCCTTT 60.000 47.619 9.73 0.00 0.00 3.11
3453 3635 1.212751 GCGCTACTTTGCCCTTTGG 59.787 57.895 0.00 0.00 0.00 3.28
3471 3653 5.835280 CCTTTGGAATAATATGGAGGCTGTT 59.165 40.000 0.00 0.00 0.00 3.16
3473 3655 7.671398 CCTTTGGAATAATATGGAGGCTGTTAT 59.329 37.037 0.00 0.00 0.00 1.89
3525 3707 4.038271 TGGAAAGAAAGATCCAGCATGT 57.962 40.909 0.00 0.00 40.74 3.21
3639 3822 9.434275 TGGATTTAGTAGGACTATGAATCAGAA 57.566 33.333 10.82 0.00 33.07 3.02
3680 3863 8.863049 CCATTTCATTCACTTAAGCATGTTTAC 58.137 33.333 1.29 0.00 0.00 2.01
3688 3871 9.677567 TTCACTTAAGCATGTTTACTTTTGATC 57.322 29.630 1.29 0.00 0.00 2.92
3707 3890 5.499313 TGATCAACATGCTCACAGGAAATA 58.501 37.500 0.00 0.00 0.00 1.40
3715 3898 7.765307 ACATGCTCACAGGAAATATTTTACTG 58.235 34.615 22.23 22.23 34.05 2.74
3716 3899 7.394359 ACATGCTCACAGGAAATATTTTACTGT 59.606 33.333 23.15 23.15 38.40 3.55
3717 3900 7.759489 TGCTCACAGGAAATATTTTACTGTT 57.241 32.000 24.92 14.46 36.90 3.16
3719 3902 8.637986 TGCTCACAGGAAATATTTTACTGTTTT 58.362 29.630 24.92 10.82 36.90 2.43
3734 3917 9.531942 TTTTACTGTTTTACTGAGTATTCGTCA 57.468 29.630 0.00 0.00 0.00 4.35
3735 3918 9.531942 TTTACTGTTTTACTGAGTATTCGTCAA 57.468 29.630 0.00 0.00 0.00 3.18
3736 3919 9.531942 TTACTGTTTTACTGAGTATTCGTCAAA 57.468 29.630 0.00 0.00 0.00 2.69
3737 3920 8.073355 ACTGTTTTACTGAGTATTCGTCAAAG 57.927 34.615 0.00 0.00 0.00 2.77
3738 3921 7.709613 ACTGTTTTACTGAGTATTCGTCAAAGT 59.290 33.333 0.00 0.00 0.00 2.66
3739 3922 9.188588 CTGTTTTACTGAGTATTCGTCAAAGTA 57.811 33.333 0.00 0.00 0.00 2.24
3740 3923 9.531942 TGTTTTACTGAGTATTCGTCAAAGTAA 57.468 29.630 0.00 0.00 0.00 2.24
3741 3924 9.789029 GTTTTACTGAGTATTCGTCAAAGTAAC 57.211 33.333 0.00 0.00 0.00 2.50
3745 3928 8.603242 ACTGAGTATTCGTCAAAGTAACATTT 57.397 30.769 0.00 0.00 0.00 2.32
3780 3963 8.839310 TCTTTGAAAACCAAAACTTCATTTGA 57.161 26.923 1.56 0.00 43.50 2.69
3781 3964 9.447157 TCTTTGAAAACCAAAACTTCATTTGAT 57.553 25.926 1.56 0.00 43.50 2.57
3782 3965 9.493206 CTTTGAAAACCAAAACTTCATTTGATG 57.507 29.630 1.56 0.00 43.50 3.07
3783 3966 7.551035 TGAAAACCAAAACTTCATTTGATGG 57.449 32.000 1.56 0.00 41.73 3.51
3784 3967 6.541641 TGAAAACCAAAACTTCATTTGATGGG 59.458 34.615 1.56 0.00 41.73 4.00
3785 3968 4.006780 ACCAAAACTTCATTTGATGGGC 57.993 40.909 1.56 0.00 41.73 5.36
3786 3969 3.244526 ACCAAAACTTCATTTGATGGGCC 60.245 43.478 0.00 0.00 41.73 5.80
3787 3970 3.008266 CCAAAACTTCATTTGATGGGCCT 59.992 43.478 4.53 0.00 41.73 5.19
3788 3971 4.505390 CCAAAACTTCATTTGATGGGCCTT 60.505 41.667 4.53 0.00 41.73 4.35
3789 3972 4.541973 AAACTTCATTTGATGGGCCTTC 57.458 40.909 12.30 12.30 0.00 3.46
3790 3973 3.173953 ACTTCATTTGATGGGCCTTCA 57.826 42.857 17.45 17.45 0.00 3.02
3791 3974 2.827921 ACTTCATTTGATGGGCCTTCAC 59.172 45.455 20.67 2.55 0.00 3.18
3792 3975 2.905415 TCATTTGATGGGCCTTCACT 57.095 45.000 20.67 9.34 0.00 3.41
3793 3976 2.726821 TCATTTGATGGGCCTTCACTC 58.273 47.619 20.67 3.04 0.00 3.51
3794 3977 2.309755 TCATTTGATGGGCCTTCACTCT 59.690 45.455 20.67 6.67 0.00 3.24
3795 3978 2.978156 TTTGATGGGCCTTCACTCTT 57.022 45.000 20.67 0.00 0.00 2.85
3796 3979 2.205022 TTGATGGGCCTTCACTCTTG 57.795 50.000 20.67 0.00 0.00 3.02
3797 3980 0.322816 TGATGGGCCTTCACTCTTGC 60.323 55.000 17.45 0.00 0.00 4.01
3798 3981 0.322816 GATGGGCCTTCACTCTTGCA 60.323 55.000 14.15 0.00 0.00 4.08
3799 3982 0.112995 ATGGGCCTTCACTCTTGCAA 59.887 50.000 4.53 0.00 0.00 4.08
3800 3983 0.823356 TGGGCCTTCACTCTTGCAAC 60.823 55.000 4.53 0.00 0.00 4.17
3801 3984 1.527433 GGGCCTTCACTCTTGCAACC 61.527 60.000 0.84 0.00 0.00 3.77
3802 3985 1.527433 GGCCTTCACTCTTGCAACCC 61.527 60.000 0.00 0.00 0.00 4.11
3803 3986 1.527433 GCCTTCACTCTTGCAACCCC 61.527 60.000 0.00 0.00 0.00 4.95
3804 3987 0.111253 CCTTCACTCTTGCAACCCCT 59.889 55.000 0.00 0.00 0.00 4.79
3805 3988 1.351017 CCTTCACTCTTGCAACCCCTA 59.649 52.381 0.00 0.00 0.00 3.53
3806 3989 2.025887 CCTTCACTCTTGCAACCCCTAT 60.026 50.000 0.00 0.00 0.00 2.57
3807 3990 2.787473 TCACTCTTGCAACCCCTATG 57.213 50.000 0.00 0.00 0.00 2.23
3808 3991 2.265367 TCACTCTTGCAACCCCTATGA 58.735 47.619 0.00 0.00 0.00 2.15
3809 3992 2.642311 TCACTCTTGCAACCCCTATGAA 59.358 45.455 0.00 0.00 0.00 2.57
3810 3993 3.266772 TCACTCTTGCAACCCCTATGAAT 59.733 43.478 0.00 0.00 0.00 2.57
3811 3994 4.019174 CACTCTTGCAACCCCTATGAATT 58.981 43.478 0.00 0.00 0.00 2.17
3812 3995 4.019174 ACTCTTGCAACCCCTATGAATTG 58.981 43.478 0.00 0.00 0.00 2.32
3813 3996 3.364549 TCTTGCAACCCCTATGAATTGG 58.635 45.455 0.00 0.00 0.00 3.16
3814 3997 2.917713 TGCAACCCCTATGAATTGGT 57.082 45.000 0.00 0.00 0.00 3.67
3815 3998 2.733956 TGCAACCCCTATGAATTGGTC 58.266 47.619 0.00 0.00 0.00 4.02
3816 3999 2.311542 TGCAACCCCTATGAATTGGTCT 59.688 45.455 0.00 0.00 0.00 3.85
3817 4000 3.525609 TGCAACCCCTATGAATTGGTCTA 59.474 43.478 0.00 0.00 0.00 2.59
3818 4001 4.017958 TGCAACCCCTATGAATTGGTCTAA 60.018 41.667 0.00 0.00 0.00 2.10
3819 4002 4.580580 GCAACCCCTATGAATTGGTCTAAG 59.419 45.833 0.00 0.00 0.00 2.18
3820 4003 5.755849 CAACCCCTATGAATTGGTCTAAGT 58.244 41.667 0.00 0.00 0.00 2.24
3821 4004 6.187682 CAACCCCTATGAATTGGTCTAAGTT 58.812 40.000 0.00 0.00 0.00 2.66
3822 4005 5.755849 ACCCCTATGAATTGGTCTAAGTTG 58.244 41.667 0.00 0.00 0.00 3.16
3823 4006 5.491078 ACCCCTATGAATTGGTCTAAGTTGA 59.509 40.000 0.00 0.00 0.00 3.18
3824 4007 5.823045 CCCCTATGAATTGGTCTAAGTTGAC 59.177 44.000 0.00 0.00 36.31 3.18
3825 4008 5.523916 CCCTATGAATTGGTCTAAGTTGACG 59.476 44.000 0.00 0.00 37.81 4.35
3826 4009 6.338146 CCTATGAATTGGTCTAAGTTGACGA 58.662 40.000 0.00 0.00 37.81 4.20
3827 4010 6.255887 CCTATGAATTGGTCTAAGTTGACGAC 59.744 42.308 0.00 0.00 37.81 4.34
3838 4021 1.411612 AGTTGACGACGGAAAACTCCT 59.588 47.619 0.00 0.00 0.00 3.69
3845 4028 0.472471 ACGGAAAACTCCTTGCTGGA 59.528 50.000 0.00 0.00 43.86 3.86
3855 4038 1.202806 TCCTTGCTGGACCTGTCAAAG 60.203 52.381 0.00 2.77 40.56 2.77
3864 4047 5.337652 GCTGGACCTGTCAAAGTAATCTACT 60.338 44.000 0.00 0.00 41.73 2.57
3911 4095 7.714377 ACTGGATTCTCATAGTCAGCAAAATAG 59.286 37.037 0.00 0.00 0.00 1.73
3920 4104 3.503748 AGTCAGCAAAATAGTTGTCTGCC 59.496 43.478 0.00 0.00 33.41 4.85
4010 4195 3.814842 TCATACTCCGCAAAATATGGCAG 59.185 43.478 0.00 0.00 0.00 4.85
4016 4201 2.164219 CCGCAAAATATGGCAGTGTCTT 59.836 45.455 0.00 0.00 0.00 3.01
4021 4206 5.163519 GCAAAATATGGCAGTGTCTTACCAT 60.164 40.000 0.00 0.18 44.88 3.55
4028 4213 4.076394 GGCAGTGTCTTACCATTGGTTTA 58.924 43.478 14.78 1.92 37.09 2.01
4207 4392 1.821136 GGGCAGGAAATCTGTTCCTTG 59.179 52.381 4.86 3.28 46.21 3.61
4208 4393 2.519013 GGCAGGAAATCTGTTCCTTGT 58.481 47.619 4.86 0.00 46.21 3.16
4231 4417 6.037500 TGTTGCATGTTTGATAGATGACTAGC 59.962 38.462 0.00 0.00 35.81 3.42
4272 4458 6.875948 TTAGTGCTTCATGTTGTATGTTGT 57.124 33.333 0.00 0.00 0.00 3.32
4305 4494 5.380043 CTCCCAGTAATAATGATGCAAGGT 58.620 41.667 0.00 0.00 0.00 3.50
4386 4575 1.318576 CTGCCCTTTCGTTTGGTCTT 58.681 50.000 0.00 0.00 0.00 3.01
4392 4581 4.037089 GCCCTTTCGTTTGGTCTTTTCTTA 59.963 41.667 0.00 0.00 0.00 2.10
4424 4613 6.106673 GCATTAGAGAAGTTAGCAGGTGTAA 58.893 40.000 0.00 0.00 0.00 2.41
4444 4633 6.093633 GTGTAATCCCATGGTAGTTCTTCAAC 59.906 42.308 11.73 0.00 0.00 3.18
4455 4644 7.152645 TGGTAGTTCTTCAACTTACTGCTAAG 58.847 38.462 0.00 0.00 40.16 2.18
4471 4660 4.592942 TGCTAAGGAAAATCATCAGTGCT 58.407 39.130 0.00 0.00 0.00 4.40
4508 4698 7.500227 TGAAATGAGGTGGATGTAAGATGAATC 59.500 37.037 0.00 0.00 0.00 2.52
4655 4860 9.899226 ATATCTTTCAAAAGTTTTACAGTCAGC 57.101 29.630 0.00 0.00 37.31 4.26
4657 4862 7.598278 TCTTTCAAAAGTTTTACAGTCAGCAA 58.402 30.769 0.00 0.00 37.31 3.91
4658 4863 7.540745 TCTTTCAAAAGTTTTACAGTCAGCAAC 59.459 33.333 0.00 0.00 37.31 4.17
4659 4864 5.646606 TCAAAAGTTTTACAGTCAGCAACC 58.353 37.500 0.00 0.00 0.00 3.77
4660 4865 5.184096 TCAAAAGTTTTACAGTCAGCAACCA 59.816 36.000 0.00 0.00 0.00 3.67
4661 4866 5.852282 AAAGTTTTACAGTCAGCAACCAT 57.148 34.783 0.00 0.00 0.00 3.55
4662 4867 4.836125 AGTTTTACAGTCAGCAACCATG 57.164 40.909 0.00 0.00 0.00 3.66
4663 4868 4.207165 AGTTTTACAGTCAGCAACCATGT 58.793 39.130 0.00 0.00 0.00 3.21
4664 4869 4.036734 AGTTTTACAGTCAGCAACCATGTG 59.963 41.667 0.00 0.00 0.00 3.21
4665 4870 3.483808 TTACAGTCAGCAACCATGTGA 57.516 42.857 0.00 0.00 0.00 3.58
4666 4871 1.597742 ACAGTCAGCAACCATGTGAC 58.402 50.000 5.49 5.49 37.61 3.67
4667 4872 1.134128 ACAGTCAGCAACCATGTGACA 60.134 47.619 13.89 0.00 38.72 3.58
4668 4873 1.265095 CAGTCAGCAACCATGTGACAC 59.735 52.381 13.89 0.00 38.72 3.67
4669 4874 1.134128 AGTCAGCAACCATGTGACACA 60.134 47.619 11.41 11.41 38.72 3.72
4670 4875 1.881973 GTCAGCAACCATGTGACACAT 59.118 47.619 15.48 15.48 39.91 3.21
4680 4885 2.629336 TGTGACACATGTGGTAAGCA 57.371 45.000 28.64 16.41 34.19 3.91
4681 4886 2.924421 TGTGACACATGTGGTAAGCAA 58.076 42.857 28.64 5.83 34.19 3.91
4682 4887 2.616376 TGTGACACATGTGGTAAGCAAC 59.384 45.455 28.64 15.24 34.19 4.17
4683 4888 5.816821 ATGTGACACATGTGGTAAGCAACC 61.817 45.833 28.64 8.93 42.35 3.77
4743 4948 6.017400 AGTCAGCAGTGGTTTAAATCATTG 57.983 37.500 17.18 17.18 30.75 2.82
4750 4955 6.017192 GCAGTGGTTTAAATCATTGGCTTTTT 60.017 34.615 21.33 0.00 28.56 1.94
4779 4987 4.946784 AAAGCTAGCAGTGGTTAATTCG 57.053 40.909 18.83 0.00 0.00 3.34
4780 4988 3.611766 AGCTAGCAGTGGTTAATTCGT 57.388 42.857 18.83 0.00 0.00 3.85
4804 5012 5.123344 TCGGCTTTTCTAAGAATAACAAGGC 59.877 40.000 0.00 0.00 32.92 4.35
4835 5056 4.666907 AGGATCAGGTTCCCACATAATGAT 59.333 41.667 0.00 0.00 36.35 2.45
4836 5057 5.851693 AGGATCAGGTTCCCACATAATGATA 59.148 40.000 0.00 0.00 36.35 2.15
4837 5058 6.332635 AGGATCAGGTTCCCACATAATGATAA 59.667 38.462 0.00 0.00 36.35 1.75
4838 5059 7.018952 AGGATCAGGTTCCCACATAATGATAAT 59.981 37.037 0.00 0.00 36.35 1.28
4839 5060 7.337942 GGATCAGGTTCCCACATAATGATAATC 59.662 40.741 0.00 0.00 0.00 1.75
4840 5061 7.392766 TCAGGTTCCCACATAATGATAATCT 57.607 36.000 0.00 0.00 0.00 2.40
4842 5063 8.375506 TCAGGTTCCCACATAATGATAATCTAC 58.624 37.037 0.00 0.00 0.00 2.59
4844 5065 8.157476 AGGTTCCCACATAATGATAATCTACAC 58.843 37.037 0.00 0.00 0.00 2.90
4845 5066 7.936847 GGTTCCCACATAATGATAATCTACACA 59.063 37.037 0.00 0.00 0.00 3.72
4847 5068 9.913310 TTCCCACATAATGATAATCTACACAAA 57.087 29.630 0.00 0.00 0.00 2.83
4873 5094 2.766263 AGAGAACGTTATGCCCTCATCA 59.234 45.455 14.24 0.00 34.22 3.07
4937 5159 4.568760 GCGATATAAGAAGGCCAGCTTATC 59.431 45.833 24.79 16.64 38.10 1.75
5038 5262 4.971924 ACTAGGATAGCACAGGGAAGAATT 59.028 41.667 0.00 0.00 44.39 2.17
5063 5287 3.441163 GGCGACTTTATGTACGATGACA 58.559 45.455 0.00 0.00 0.00 3.58
5078 5302 4.058124 CGATGACAGAACCACAAGAGAAA 58.942 43.478 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
1 2 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
2 3 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
3 4 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
4 5 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
5 6 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
6 7 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
7 8 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
8 9 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
9 10 0.308993 GCAGGAATAATGCGAGCACC 59.691 55.000 0.00 0.00 33.31 5.01
10 11 1.016627 TGCAGGAATAATGCGAGCAC 58.983 50.000 0.00 0.00 46.87 4.40
11 12 1.971481 ATGCAGGAATAATGCGAGCA 58.029 45.000 0.00 0.00 46.87 4.26
12 13 3.360249 AAATGCAGGAATAATGCGAGC 57.640 42.857 0.00 0.00 46.87 5.03
13 14 7.140705 TGAAATAAATGCAGGAATAATGCGAG 58.859 34.615 0.00 0.00 46.87 5.03
14 15 7.036996 TGAAATAAATGCAGGAATAATGCGA 57.963 32.000 0.00 0.00 46.87 5.10
15 16 7.329438 CTGAAATAAATGCAGGAATAATGCG 57.671 36.000 0.00 0.00 46.87 4.73
25 26 5.284079 CCGGAAATCCTGAAATAAATGCAG 58.716 41.667 0.00 0.00 0.00 4.41
26 27 4.441356 GCCGGAAATCCTGAAATAAATGCA 60.441 41.667 5.05 0.00 0.00 3.96
27 28 4.051237 GCCGGAAATCCTGAAATAAATGC 58.949 43.478 5.05 0.00 0.00 3.56
28 29 4.036262 TCGCCGGAAATCCTGAAATAAATG 59.964 41.667 5.05 0.00 0.00 2.32
29 30 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
30 31 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
31 32 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
32 33 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
33 34 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
34 35 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
35 36 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
36 37 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
37 38 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
38 39 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
49 50 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
50 51 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
51 52 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
52 53 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
53 54 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
54 55 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
55 56 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
56 57 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
57 58 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
58 59 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
59 60 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
60 61 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
61 62 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
82 83 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
83 84 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
96 97 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
97 98 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
98 99 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
99 100 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
100 101 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
101 102 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
102 103 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
103 104 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
104 105 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
105 106 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
106 107 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
107 108 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
108 109 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
109 110 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
110 111 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
111 112 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
112 113 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
113 114 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
114 115 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
115 116 2.344950 GAGCCGGCATATCATCTTGAG 58.655 52.381 31.54 0.00 0.00 3.02
116 117 1.337167 CGAGCCGGCATATCATCTTGA 60.337 52.381 31.54 0.00 0.00 3.02
117 118 1.073964 CGAGCCGGCATATCATCTTG 58.926 55.000 31.54 4.88 0.00 3.02
118 119 0.036952 CCGAGCCGGCATATCATCTT 60.037 55.000 31.54 3.33 41.17 2.40
119 120 1.593787 CCGAGCCGGCATATCATCT 59.406 57.895 31.54 4.27 41.17 2.90
120 121 4.192000 CCGAGCCGGCATATCATC 57.808 61.111 31.54 15.45 41.17 2.92
136 137 1.617947 ATGAGCACCTCCGGAAGACC 61.618 60.000 7.17 0.00 0.00 3.85
137 138 1.067821 CTATGAGCACCTCCGGAAGAC 59.932 57.143 7.17 0.00 0.00 3.01
138 139 1.403814 CTATGAGCACCTCCGGAAGA 58.596 55.000 7.17 0.00 0.00 2.87
139 140 0.390860 CCTATGAGCACCTCCGGAAG 59.609 60.000 5.23 0.57 0.00 3.46
140 141 1.048724 CCCTATGAGCACCTCCGGAA 61.049 60.000 5.23 0.00 0.00 4.30
141 142 1.457643 CCCTATGAGCACCTCCGGA 60.458 63.158 2.93 2.93 0.00 5.14
142 143 2.511452 CCCCTATGAGCACCTCCGG 61.511 68.421 0.00 0.00 0.00 5.14
143 144 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
144 145 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
145 146 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
146 147 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
147 148 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
148 149 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
149 150 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
150 151 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
151 152 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
152 153 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
153 154 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
154 155 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
155 156 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
156 157 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
157 158 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
158 159 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
159 160 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
160 161 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
161 162 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
164 165 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
165 166 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
166 167 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
167 168 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
168 169 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
169 170 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
170 171 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
171 172 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
172 173 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
173 174 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
174 175 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
175 176 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
176 177 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
177 178 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
178 179 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
179 180 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
180 181 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
181 182 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
182 183 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
183 184 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
184 185 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
185 186 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
186 187 2.287457 TACGCGCATACACTCACCCC 62.287 60.000 5.73 0.00 0.00 4.95
187 188 0.249322 ATACGCGCATACACTCACCC 60.249 55.000 5.73 0.00 0.00 4.61
188 189 2.410785 TATACGCGCATACACTCACC 57.589 50.000 5.73 0.00 0.00 4.02
189 190 5.329493 TCATATATACGCGCATACACTCAC 58.671 41.667 5.73 0.00 0.00 3.51
190 191 5.554822 TCATATATACGCGCATACACTCA 57.445 39.130 5.73 0.00 0.00 3.41
191 192 4.438145 GCTCATATATACGCGCATACACTC 59.562 45.833 5.73 0.00 0.00 3.51
192 193 4.352039 GCTCATATATACGCGCATACACT 58.648 43.478 5.73 0.00 0.00 3.55
193 194 3.177838 CGCTCATATATACGCGCATACAC 59.822 47.826 5.73 0.00 39.11 2.90
194 195 3.359654 CGCTCATATATACGCGCATACA 58.640 45.455 5.73 0.00 39.11 2.29
202 203 4.724334 CAGACGTAAGCGCTCATATATACG 59.276 45.833 26.72 26.72 42.83 3.06
203 204 5.629097 ACAGACGTAAGCGCTCATATATAC 58.371 41.667 12.06 7.57 42.83 1.47
204 205 5.874895 ACAGACGTAAGCGCTCATATATA 57.125 39.130 12.06 0.00 42.83 0.86
205 206 4.768130 ACAGACGTAAGCGCTCATATAT 57.232 40.909 12.06 0.00 42.83 0.86
206 207 4.753610 AGTACAGACGTAAGCGCTCATATA 59.246 41.667 12.06 0.00 42.83 0.86
207 208 3.564644 AGTACAGACGTAAGCGCTCATAT 59.435 43.478 12.06 0.00 42.83 1.78
208 209 2.941064 AGTACAGACGTAAGCGCTCATA 59.059 45.455 12.06 0.00 42.83 2.15
209 210 1.743958 AGTACAGACGTAAGCGCTCAT 59.256 47.619 12.06 0.00 42.83 2.90
210 211 1.135774 CAGTACAGACGTAAGCGCTCA 60.136 52.381 12.06 0.00 42.83 4.26
211 212 1.129998 TCAGTACAGACGTAAGCGCTC 59.870 52.381 12.06 0.00 42.83 5.03
212 213 1.162698 TCAGTACAGACGTAAGCGCT 58.837 50.000 2.64 2.64 42.83 5.92
213 214 1.846782 CATCAGTACAGACGTAAGCGC 59.153 52.381 0.00 0.00 42.83 5.92
214 215 1.846782 GCATCAGTACAGACGTAAGCG 59.153 52.381 0.00 0.00 45.62 4.68
215 216 3.152261 AGCATCAGTACAGACGTAAGC 57.848 47.619 0.00 0.00 45.62 3.09
238 239 2.604614 GGCGTGCTCGAAAGATGTTTTT 60.605 45.455 13.13 0.00 40.84 1.94
239 240 1.069227 GGCGTGCTCGAAAGATGTTTT 60.069 47.619 13.13 0.00 40.84 2.43
240 241 0.517316 GGCGTGCTCGAAAGATGTTT 59.483 50.000 13.13 0.00 40.84 2.83
241 242 1.298859 GGGCGTGCTCGAAAGATGTT 61.299 55.000 13.13 0.00 40.84 2.71
242 243 1.741770 GGGCGTGCTCGAAAGATGT 60.742 57.895 13.13 0.00 40.84 3.06
243 244 2.464459 GGGGCGTGCTCGAAAGATG 61.464 63.158 13.13 0.00 40.84 2.90
244 245 2.125106 GGGGCGTGCTCGAAAGAT 60.125 61.111 13.13 0.00 40.84 2.40
245 246 4.735132 CGGGGCGTGCTCGAAAGA 62.735 66.667 13.13 0.00 39.71 2.52
251 252 2.894240 TTAATCGACGGGGCGTGCTC 62.894 60.000 0.00 0.00 41.37 4.26
252 253 3.009192 TTAATCGACGGGGCGTGCT 62.009 57.895 0.00 0.00 41.37 4.40
253 254 2.509786 TTAATCGACGGGGCGTGC 60.510 61.111 0.00 0.00 41.37 5.34
254 255 1.446445 TGTTAATCGACGGGGCGTG 60.446 57.895 0.00 0.00 41.37 5.34
255 256 1.446618 GTGTTAATCGACGGGGCGT 60.447 57.895 0.00 0.00 45.10 5.68
256 257 2.510594 CGTGTTAATCGACGGGGCG 61.511 63.158 0.00 0.00 31.84 6.13
257 258 1.015607 AACGTGTTAATCGACGGGGC 61.016 55.000 9.36 0.00 39.94 5.80
258 259 2.276472 TAACGTGTTAATCGACGGGG 57.724 50.000 9.36 0.00 39.94 5.73
259 260 3.181531 GGTTTAACGTGTTAATCGACGGG 60.182 47.826 6.06 0.00 39.94 5.28
260 261 3.181531 GGGTTTAACGTGTTAATCGACGG 60.182 47.826 6.06 0.00 39.94 4.79
261 262 3.674753 AGGGTTTAACGTGTTAATCGACG 59.325 43.478 6.06 6.57 41.41 5.12
262 263 5.596268 AAGGGTTTAACGTGTTAATCGAC 57.404 39.130 6.06 2.48 35.27 4.20
263 264 6.616774 AAAAGGGTTTAACGTGTTAATCGA 57.383 33.333 6.06 0.00 35.27 3.59
264 265 7.058241 CGTAAAAAGGGTTTAACGTGTTAATCG 59.942 37.037 6.06 2.35 35.27 3.34
265 266 8.067189 TCGTAAAAAGGGTTTAACGTGTTAATC 58.933 33.333 6.06 5.70 35.27 1.75
266 267 7.924940 TCGTAAAAAGGGTTTAACGTGTTAAT 58.075 30.769 6.06 0.00 35.27 1.40
267 268 7.308782 TCGTAAAAAGGGTTTAACGTGTTAA 57.691 32.000 1.18 1.18 35.17 2.01
268 269 6.910536 TCGTAAAAAGGGTTTAACGTGTTA 57.089 33.333 0.00 0.00 35.17 2.41
269 270 5.809719 TCGTAAAAAGGGTTTAACGTGTT 57.190 34.783 0.00 0.00 35.17 3.32
270 271 5.809719 TTCGTAAAAAGGGTTTAACGTGT 57.190 34.783 0.00 0.00 35.17 4.49
271 272 7.503549 TTTTTCGTAAAAAGGGTTTAACGTG 57.496 32.000 0.00 0.00 35.84 4.49
306 307 7.218614 TGGTCGAGAACTAAATGTAGGAAAAA 58.781 34.615 0.00 0.00 0.00 1.94
307 308 6.761312 TGGTCGAGAACTAAATGTAGGAAAA 58.239 36.000 0.00 0.00 0.00 2.29
308 309 6.349243 TGGTCGAGAACTAAATGTAGGAAA 57.651 37.500 0.00 0.00 0.00 3.13
309 310 5.623824 GCTGGTCGAGAACTAAATGTAGGAA 60.624 44.000 0.00 0.00 0.00 3.36
310 311 4.142227 GCTGGTCGAGAACTAAATGTAGGA 60.142 45.833 0.00 0.00 0.00 2.94
311 312 4.113354 GCTGGTCGAGAACTAAATGTAGG 58.887 47.826 0.00 0.00 0.00 3.18
312 313 3.791887 CGCTGGTCGAGAACTAAATGTAG 59.208 47.826 0.00 0.00 41.67 2.74
313 314 3.441222 TCGCTGGTCGAGAACTAAATGTA 59.559 43.478 0.00 0.00 43.16 2.29
314 315 2.230508 TCGCTGGTCGAGAACTAAATGT 59.769 45.455 0.00 0.00 43.16 2.71
315 316 2.876091 TCGCTGGTCGAGAACTAAATG 58.124 47.619 0.00 0.00 43.16 2.32
325 326 3.096541 CGTTTACTTCGCTGGTCGA 57.903 52.632 0.00 0.00 46.88 4.20
333 334 2.667481 TGAATTACGGGCGTTTACTTCG 59.333 45.455 0.00 0.00 0.00 3.79
334 335 4.870221 ATGAATTACGGGCGTTTACTTC 57.130 40.909 0.00 0.00 0.00 3.01
335 336 4.696402 TGAATGAATTACGGGCGTTTACTT 59.304 37.500 0.00 0.00 0.00 2.24
336 337 4.255301 TGAATGAATTACGGGCGTTTACT 58.745 39.130 0.00 0.00 0.00 2.24
337 338 4.603231 TGAATGAATTACGGGCGTTTAC 57.397 40.909 0.00 0.00 0.00 2.01
338 339 4.273969 GGATGAATGAATTACGGGCGTTTA 59.726 41.667 0.00 0.00 0.00 2.01
339 340 3.066203 GGATGAATGAATTACGGGCGTTT 59.934 43.478 0.00 0.00 0.00 3.60
340 341 2.616842 GGATGAATGAATTACGGGCGTT 59.383 45.455 0.00 0.00 0.00 4.84
341 342 2.218603 GGATGAATGAATTACGGGCGT 58.781 47.619 0.00 0.00 0.00 5.68
342 343 2.217750 TGGATGAATGAATTACGGGCG 58.782 47.619 0.00 0.00 0.00 6.13
343 344 4.278170 TGAATGGATGAATGAATTACGGGC 59.722 41.667 0.00 0.00 0.00 6.13
344 345 6.389830 TTGAATGGATGAATGAATTACGGG 57.610 37.500 0.00 0.00 0.00 5.28
345 346 7.220683 GTGTTTGAATGGATGAATGAATTACGG 59.779 37.037 0.00 0.00 0.00 4.02
346 347 7.044771 CGTGTTTGAATGGATGAATGAATTACG 60.045 37.037 0.00 0.00 0.00 3.18
347 348 7.220683 CCGTGTTTGAATGGATGAATGAATTAC 59.779 37.037 0.00 0.00 0.00 1.89
348 349 7.257003 CCGTGTTTGAATGGATGAATGAATTA 58.743 34.615 0.00 0.00 0.00 1.40
349 350 6.101332 CCGTGTTTGAATGGATGAATGAATT 58.899 36.000 0.00 0.00 0.00 2.17
350 351 5.653507 CCGTGTTTGAATGGATGAATGAAT 58.346 37.500 0.00 0.00 0.00 2.57
351 352 4.617995 GCCGTGTTTGAATGGATGAATGAA 60.618 41.667 0.00 0.00 0.00 2.57
352 353 3.119531 GCCGTGTTTGAATGGATGAATGA 60.120 43.478 0.00 0.00 0.00 2.57
353 354 3.181397 GCCGTGTTTGAATGGATGAATG 58.819 45.455 0.00 0.00 0.00 2.67
354 355 2.824936 TGCCGTGTTTGAATGGATGAAT 59.175 40.909 0.00 0.00 0.00 2.57
355 356 2.234143 TGCCGTGTTTGAATGGATGAA 58.766 42.857 0.00 0.00 0.00 2.57
356 357 1.902938 TGCCGTGTTTGAATGGATGA 58.097 45.000 0.00 0.00 0.00 2.92
357 358 2.094597 ACATGCCGTGTTTGAATGGATG 60.095 45.455 0.00 0.00 38.01 3.51
358 359 2.170166 ACATGCCGTGTTTGAATGGAT 58.830 42.857 0.00 0.00 38.01 3.41
359 360 1.614996 ACATGCCGTGTTTGAATGGA 58.385 45.000 0.00 0.00 38.01 3.41
368 369 2.356135 GGACTAATCAACATGCCGTGT 58.644 47.619 0.00 0.00 44.84 4.49
369 370 1.327460 CGGACTAATCAACATGCCGTG 59.673 52.381 0.00 0.00 33.14 4.94
370 371 1.066430 ACGGACTAATCAACATGCCGT 60.066 47.619 0.00 0.00 44.77 5.68
371 372 1.327460 CACGGACTAATCAACATGCCG 59.673 52.381 0.00 0.00 42.64 5.69
372 373 1.064060 GCACGGACTAATCAACATGCC 59.936 52.381 0.00 0.00 0.00 4.40
373 374 1.737236 TGCACGGACTAATCAACATGC 59.263 47.619 0.00 0.00 0.00 4.06
374 375 2.741517 TGTGCACGGACTAATCAACATG 59.258 45.455 13.13 0.00 0.00 3.21
375 376 3.052455 TGTGCACGGACTAATCAACAT 57.948 42.857 13.13 0.00 0.00 2.71
376 377 2.535012 TGTGCACGGACTAATCAACA 57.465 45.000 13.13 0.00 0.00 3.33
377 378 2.095853 CCATGTGCACGGACTAATCAAC 59.904 50.000 13.13 0.00 0.00 3.18
378 379 2.355197 CCATGTGCACGGACTAATCAA 58.645 47.619 13.13 0.00 0.00 2.57
379 380 2.011548 GCCATGTGCACGGACTAATCA 61.012 52.381 13.13 0.00 40.77 2.57
380 381 0.657840 GCCATGTGCACGGACTAATC 59.342 55.000 13.13 0.00 40.77 1.75
381 382 1.089481 CGCCATGTGCACGGACTAAT 61.089 55.000 13.13 0.00 41.33 1.73
382 383 1.739929 CGCCATGTGCACGGACTAA 60.740 57.895 13.13 0.00 41.33 2.24
383 384 2.125713 CGCCATGTGCACGGACTA 60.126 61.111 13.13 0.00 41.33 2.59
384 385 4.314440 ACGCCATGTGCACGGACT 62.314 61.111 13.13 0.00 41.33 3.85
385 386 4.088762 CACGCCATGTGCACGGAC 62.089 66.667 13.13 4.05 42.70 4.79
393 394 1.934220 ATCGTCTCGTCACGCCATGT 61.934 55.000 0.00 0.00 39.74 3.21
394 395 1.202973 GATCGTCTCGTCACGCCATG 61.203 60.000 0.00 0.00 39.74 3.66
395 396 1.064296 GATCGTCTCGTCACGCCAT 59.936 57.895 0.00 0.00 39.74 4.40
396 397 2.483745 GATCGTCTCGTCACGCCA 59.516 61.111 0.00 0.00 39.74 5.69
397 398 2.648102 CGATCGTCTCGTCACGCC 60.648 66.667 7.03 0.00 42.56 5.68
405 406 7.356557 CGTTGTGAATTTATCTACGATCGTCTC 60.357 40.741 26.48 8.34 33.16 3.36
406 407 6.414109 CGTTGTGAATTTATCTACGATCGTCT 59.586 38.462 26.48 13.23 33.16 4.18
407 408 6.561039 CGTTGTGAATTTATCTACGATCGTC 58.439 40.000 26.48 7.46 33.16 4.20
408 409 5.051907 GCGTTGTGAATTTATCTACGATCGT 60.052 40.000 25.94 25.94 33.16 3.73
409 410 5.051973 TGCGTTGTGAATTTATCTACGATCG 60.052 40.000 14.88 14.88 33.16 3.69
410 411 6.268797 TGCGTTGTGAATTTATCTACGATC 57.731 37.500 12.95 0.00 33.16 3.69
411 412 6.312918 ACTTGCGTTGTGAATTTATCTACGAT 59.687 34.615 12.95 0.00 33.16 3.73
412 413 5.636121 ACTTGCGTTGTGAATTTATCTACGA 59.364 36.000 12.95 0.00 33.16 3.43
413 414 5.854157 ACTTGCGTTGTGAATTTATCTACG 58.146 37.500 0.00 0.00 33.92 3.51
414 415 5.952064 CGACTTGCGTTGTGAATTTATCTAC 59.048 40.000 0.00 0.00 34.64 2.59
415 416 5.865013 TCGACTTGCGTTGTGAATTTATCTA 59.135 36.000 0.00 0.00 41.80 1.98
416 417 4.688879 TCGACTTGCGTTGTGAATTTATCT 59.311 37.500 0.00 0.00 41.80 1.98
417 418 4.953269 TCGACTTGCGTTGTGAATTTATC 58.047 39.130 0.00 0.00 41.80 1.75
418 419 4.451096 ACTCGACTTGCGTTGTGAATTTAT 59.549 37.500 0.00 0.00 41.80 1.40
419 420 3.805422 ACTCGACTTGCGTTGTGAATTTA 59.195 39.130 0.00 0.00 41.80 1.40
420 421 2.612212 ACTCGACTTGCGTTGTGAATTT 59.388 40.909 0.00 0.00 41.80 1.82
421 422 2.210116 ACTCGACTTGCGTTGTGAATT 58.790 42.857 0.00 0.00 41.80 2.17
422 423 1.865865 ACTCGACTTGCGTTGTGAAT 58.134 45.000 0.00 0.00 41.80 2.57
423 424 2.495409 TACTCGACTTGCGTTGTGAA 57.505 45.000 0.00 0.00 41.80 3.18
424 425 2.223641 ACTTACTCGACTTGCGTTGTGA 60.224 45.455 0.00 0.00 41.80 3.58
425 426 2.124903 ACTTACTCGACTTGCGTTGTG 58.875 47.619 0.00 0.00 41.80 3.33
426 427 2.391879 GACTTACTCGACTTGCGTTGT 58.608 47.619 0.00 0.00 41.80 3.32
427 428 1.382419 CGACTTACTCGACTTGCGTTG 59.618 52.381 0.00 0.00 46.14 4.10
428 429 1.002033 ACGACTTACTCGACTTGCGTT 60.002 47.619 0.00 0.00 46.14 4.84
429 430 0.590195 ACGACTTACTCGACTTGCGT 59.410 50.000 0.00 0.00 46.14 5.24
430 431 1.136029 AGACGACTTACTCGACTTGCG 60.136 52.381 0.00 0.00 43.60 4.85
431 432 2.160022 AGAGACGACTTACTCGACTTGC 59.840 50.000 0.00 0.00 45.62 4.01
432 433 3.432592 TGAGAGACGACTTACTCGACTTG 59.567 47.826 0.00 0.00 45.62 3.16
433 434 3.661944 TGAGAGACGACTTACTCGACTT 58.338 45.455 0.00 0.00 45.62 3.01
435 436 3.252400 TCTGAGAGACGACTTACTCGAC 58.748 50.000 0.00 0.00 46.14 4.20
436 437 3.589495 TCTGAGAGACGACTTACTCGA 57.411 47.619 0.00 0.00 46.14 4.04
438 439 5.449451 GGGAAATCTGAGAGACGACTTACTC 60.449 48.000 0.00 0.00 0.00 2.59
439 440 4.399934 GGGAAATCTGAGAGACGACTTACT 59.600 45.833 0.00 0.00 0.00 2.24
440 441 4.399934 AGGGAAATCTGAGAGACGACTTAC 59.600 45.833 0.00 0.00 0.00 2.34
441 442 4.601084 AGGGAAATCTGAGAGACGACTTA 58.399 43.478 0.00 0.00 0.00 2.24
442 443 3.436243 AGGGAAATCTGAGAGACGACTT 58.564 45.455 0.00 0.00 0.00 3.01
443 444 3.094484 AGGGAAATCTGAGAGACGACT 57.906 47.619 0.00 0.00 0.00 4.18
444 445 3.878160 AAGGGAAATCTGAGAGACGAC 57.122 47.619 0.00 0.00 0.00 4.34
445 446 3.578716 ACAAAGGGAAATCTGAGAGACGA 59.421 43.478 0.00 0.00 0.00 4.20
446 447 3.931578 ACAAAGGGAAATCTGAGAGACG 58.068 45.455 0.00 0.00 0.00 4.18
447 448 6.287589 TCTACAAAGGGAAATCTGAGAGAC 57.712 41.667 0.00 0.00 0.00 3.36
448 449 6.270000 TGTTCTACAAAGGGAAATCTGAGAGA 59.730 38.462 0.00 0.00 0.00 3.10
449 450 6.467677 TGTTCTACAAAGGGAAATCTGAGAG 58.532 40.000 0.00 0.00 0.00 3.20
450 451 6.433847 TGTTCTACAAAGGGAAATCTGAGA 57.566 37.500 0.00 0.00 0.00 3.27
451 452 7.510549 TTTGTTCTACAAAGGGAAATCTGAG 57.489 36.000 1.10 0.00 42.55 3.35
463 464 8.885722 CACCAGTAGTAACTTTTGTTCTACAAA 58.114 33.333 1.10 1.10 45.37 2.83
464 465 7.496591 CCACCAGTAGTAACTTTTGTTCTACAA 59.503 37.037 14.46 0.00 42.45 2.41
465 466 6.987992 CCACCAGTAGTAACTTTTGTTCTACA 59.012 38.462 14.46 0.00 42.45 2.74
466 467 6.988580 ACCACCAGTAGTAACTTTTGTTCTAC 59.011 38.462 0.00 0.00 42.45 2.59
467 468 7.128234 ACCACCAGTAGTAACTTTTGTTCTA 57.872 36.000 0.00 0.00 42.45 2.10
468 469 5.997843 ACCACCAGTAGTAACTTTTGTTCT 58.002 37.500 0.00 0.00 42.45 3.01
469 470 5.050567 CGACCACCAGTAGTAACTTTTGTTC 60.051 44.000 0.00 0.00 42.45 3.18
470 471 4.812626 CGACCACCAGTAGTAACTTTTGTT 59.187 41.667 0.00 0.00 45.76 2.83
471 472 4.374399 CGACCACCAGTAGTAACTTTTGT 58.626 43.478 0.00 0.00 31.97 2.83
472 473 3.744426 CCGACCACCAGTAGTAACTTTTG 59.256 47.826 0.00 0.00 31.97 2.44
473 474 3.642848 TCCGACCACCAGTAGTAACTTTT 59.357 43.478 0.00 0.00 31.97 2.27
474 475 3.006217 GTCCGACCACCAGTAGTAACTTT 59.994 47.826 0.00 0.00 31.97 2.66
475 476 2.560105 GTCCGACCACCAGTAGTAACTT 59.440 50.000 0.00 0.00 31.97 2.66
476 477 2.165998 GTCCGACCACCAGTAGTAACT 58.834 52.381 0.00 0.00 35.91 2.24
477 478 1.135575 CGTCCGACCACCAGTAGTAAC 60.136 57.143 0.00 0.00 0.00 2.50
478 479 1.167851 CGTCCGACCACCAGTAGTAA 58.832 55.000 0.00 0.00 0.00 2.24
479 480 0.677731 CCGTCCGACCACCAGTAGTA 60.678 60.000 0.00 0.00 0.00 1.82
480 481 1.975407 CCGTCCGACCACCAGTAGT 60.975 63.158 0.00 0.00 0.00 2.73
481 482 2.882876 CCGTCCGACCACCAGTAG 59.117 66.667 0.00 0.00 0.00 2.57
482 483 3.376078 GCCGTCCGACCACCAGTA 61.376 66.667 0.00 0.00 0.00 2.74
484 485 4.742201 CAGCCGTCCGACCACCAG 62.742 72.222 0.00 0.00 0.00 4.00
570 571 6.142817 GCAGTTCGAATCCGCATATAATTTT 58.857 36.000 0.00 0.00 35.37 1.82
571 572 5.614668 CGCAGTTCGAATCCGCATATAATTT 60.615 40.000 0.00 0.00 41.67 1.82
573 574 3.367932 CGCAGTTCGAATCCGCATATAAT 59.632 43.478 0.00 0.00 41.67 1.28
574 575 2.729360 CGCAGTTCGAATCCGCATATAA 59.271 45.455 0.00 0.00 41.67 0.98
575 576 2.030628 TCGCAGTTCGAATCCGCATATA 60.031 45.455 0.00 0.00 45.36 0.86
620 635 4.083271 CGCGATCTGGATCTGTATTCTGTA 60.083 45.833 0.00 0.00 35.72 2.74
622 637 3.240884 CGCGATCTGGATCTGTATTCTG 58.759 50.000 0.00 0.00 35.72 3.02
623 638 2.352225 GCGCGATCTGGATCTGTATTCT 60.352 50.000 12.10 0.00 35.72 2.40
625 640 1.341209 TGCGCGATCTGGATCTGTATT 59.659 47.619 12.10 0.00 35.72 1.89
626 641 0.961753 TGCGCGATCTGGATCTGTAT 59.038 50.000 12.10 0.00 35.72 2.29
926 981 0.966370 AGAGTGACCTCAGTACGGCC 60.966 60.000 0.00 0.00 40.40 6.13
1195 1289 1.970352 GAAGGAGGAGCTGGAGCCAG 61.970 65.000 12.17 12.17 46.15 4.85
1210 1304 1.675641 CGGAACCCAGCAAGGAAGG 60.676 63.158 0.00 0.00 41.22 3.46
1291 1407 2.796383 CGCACTACTACTAGCAAGCCAG 60.796 54.545 0.00 0.00 0.00 4.85
1312 1428 4.362476 CTTGGGCAGCAAACCGGC 62.362 66.667 0.00 0.00 0.00 6.13
1313 1429 3.683937 CCTTGGGCAGCAAACCGG 61.684 66.667 0.00 0.00 0.00 5.28
1338 1460 5.066764 TCCGTACTAAGCCAAATTAATTGCC 59.933 40.000 0.39 0.00 37.73 4.52
1387 1541 4.522022 AGGAGCTTCAGATTTTGGTTTCTG 59.478 41.667 0.00 0.00 40.58 3.02
1394 1555 2.555325 TGTGCAGGAGCTTCAGATTTTG 59.445 45.455 0.00 0.00 42.74 2.44
1428 1589 7.118101 TCACTTGCAATTGGAAAGCATTTAATC 59.882 33.333 15.87 0.00 39.27 1.75
1485 1650 8.553459 ACTAATAACTTGTGAGAACCATCTTG 57.447 34.615 0.00 0.00 35.54 3.02
1530 1698 6.951530 CGATTACGACGTATTTGACATTTTGT 59.048 34.615 8.81 0.00 42.66 2.83
1533 1701 6.636666 ACGATTACGACGTATTTGACATTT 57.363 33.333 19.16 0.00 42.17 2.32
1548 1716 9.755064 AATTTGAATCTAACAGAAACGATTACG 57.245 29.630 0.00 0.00 45.75 3.18
1564 1732 6.234177 AGTCCACTTCGAAGAATTTGAATCT 58.766 36.000 31.08 13.37 46.70 2.40
1595 1763 8.667463 GCTCTGTTTTAATAACGGGTATAACAA 58.333 33.333 2.53 0.00 0.00 2.83
1597 1765 8.200364 TGCTCTGTTTTAATAACGGGTATAAC 57.800 34.615 0.00 0.00 0.00 1.89
1598 1766 8.832521 CATGCTCTGTTTTAATAACGGGTATAA 58.167 33.333 0.00 0.00 0.00 0.98
1599 1767 7.041644 GCATGCTCTGTTTTAATAACGGGTATA 60.042 37.037 11.37 0.00 0.00 1.47
1600 1768 6.238648 GCATGCTCTGTTTTAATAACGGGTAT 60.239 38.462 11.37 0.00 0.00 2.73
1601 1769 5.065474 GCATGCTCTGTTTTAATAACGGGTA 59.935 40.000 11.37 0.00 0.00 3.69
1602 1770 4.142469 GCATGCTCTGTTTTAATAACGGGT 60.142 41.667 11.37 0.00 0.00 5.28
1603 1771 4.351192 GCATGCTCTGTTTTAATAACGGG 58.649 43.478 11.37 0.00 0.00 5.28
1604 1772 4.028383 CGCATGCTCTGTTTTAATAACGG 58.972 43.478 17.13 0.00 0.00 4.44
1605 1773 4.491942 CACGCATGCTCTGTTTTAATAACG 59.508 41.667 17.13 0.00 0.00 3.18
1651 1819 6.581388 TTAATGACAGGGAAATGGATCTCT 57.419 37.500 0.00 0.00 0.00 3.10
1690 1858 5.697633 AGTAAAAACAGCATGCAAAATCCAG 59.302 36.000 21.98 1.43 42.53 3.86
1696 1864 6.974932 TGAAAAGTAAAAACAGCATGCAAA 57.025 29.167 21.98 0.00 42.53 3.68
1729 1899 6.112058 GTCTGGAGCATCTTACTGAGAATTT 58.888 40.000 0.00 0.00 38.06 1.82
1730 1900 5.188555 TGTCTGGAGCATCTTACTGAGAATT 59.811 40.000 0.00 0.00 38.06 2.17
1731 1901 4.713814 TGTCTGGAGCATCTTACTGAGAAT 59.286 41.667 0.00 0.00 38.06 2.40
1732 1902 4.089361 TGTCTGGAGCATCTTACTGAGAA 58.911 43.478 0.00 0.00 38.06 2.87
1772 1942 6.597280 AGCAGAACTGAACCAATAAGAAGATC 59.403 38.462 5.97 0.00 0.00 2.75
1803 1973 6.584185 AAGAAAATAAAGGCACGGTATGTT 57.416 33.333 0.00 0.00 0.00 2.71
1805 1975 7.883229 AAAAAGAAAATAAAGGCACGGTATG 57.117 32.000 0.00 0.00 0.00 2.39
1880 2051 7.160049 ACTACTTAAGAAGAAAACCTGTAGCC 58.840 38.462 10.09 0.00 0.00 3.93
1898 2069 6.037610 GCGGTAGCTTCTTGTAGTACTACTTA 59.962 42.308 28.56 17.68 41.01 2.24
1903 2074 2.097142 CGCGGTAGCTTCTTGTAGTACT 59.903 50.000 0.00 0.00 42.32 2.73
1932 2103 6.472016 TCCTATCATTAGCAACAACAACAGA 58.528 36.000 0.00 0.00 0.00 3.41
1934 2105 7.230510 ACTTTCCTATCATTAGCAACAACAACA 59.769 33.333 0.00 0.00 0.00 3.33
2022 2193 2.275318 GCAAGAAACATCTCCTCCTCG 58.725 52.381 0.00 0.00 0.00 4.63
2079 2250 0.389166 GGAGCAACACTGAGAGACGG 60.389 60.000 0.00 0.00 0.00 4.79
2124 2295 0.821301 GCAGCAGATCTTAAGGGGGC 60.821 60.000 1.85 2.23 0.00 5.80
2137 2308 0.037512 AGCTACACAGACAGCAGCAG 60.038 55.000 0.00 0.00 40.36 4.24
2236 2407 8.166422 ACAATTTAGTTTTCACTAACCTGAGG 57.834 34.615 0.00 0.00 43.86 3.86
2261 2432 2.288825 CGAACACTGTAGCTGGAAAGGA 60.289 50.000 0.00 0.00 0.00 3.36
2282 2453 7.696453 TCTTGAACGAAGACAAATGAGTTTTTC 59.304 33.333 0.00 0.00 35.64 2.29
2301 2472 5.998363 AAGGGACTACAGAATGTTCTTGAAC 59.002 40.000 6.56 6.56 46.24 3.18
2354 2525 5.835113 TTATCAGAAAAGGGCAGCATTAC 57.165 39.130 0.00 0.00 0.00 1.89
2390 2561 6.401047 AGAATCCCATCATTTACAGCAATG 57.599 37.500 0.00 0.00 35.73 2.82
2503 2678 6.986817 ACATGTTTCCTCAGCATACTATGTAC 59.013 38.462 0.00 0.00 0.00 2.90
2506 2681 5.277683 GCACATGTTTCCTCAGCATACTATG 60.278 44.000 0.00 0.00 0.00 2.23
2507 2682 4.818546 GCACATGTTTCCTCAGCATACTAT 59.181 41.667 0.00 0.00 0.00 2.12
2508 2683 4.191544 GCACATGTTTCCTCAGCATACTA 58.808 43.478 0.00 0.00 0.00 1.82
2509 2684 3.012518 GCACATGTTTCCTCAGCATACT 58.987 45.455 0.00 0.00 0.00 2.12
2510 2685 2.749076 TGCACATGTTTCCTCAGCATAC 59.251 45.455 0.00 0.00 0.00 2.39
2671 2846 2.621055 TGGCACAATGTCAACTTACACC 59.379 45.455 0.00 0.00 31.92 4.16
2727 2902 5.500234 AGACTGTGCTCCTAAATTTATGCA 58.500 37.500 13.22 13.22 0.00 3.96
2747 2922 9.750125 ACCAAGAAATATCAAACAAAAGAAGAC 57.250 29.630 0.00 0.00 0.00 3.01
2823 3002 1.405391 GGCGGTGGCTGCAAAAATATT 60.405 47.619 0.50 0.00 37.51 1.28
3117 3297 1.810151 GTGGTCGCAGCCAAAAGATTA 59.190 47.619 0.00 0.00 40.68 1.75
3190 3372 4.487714 TTCAGGATCACCATAACAGTCC 57.512 45.455 0.00 0.00 38.94 3.85
3283 3465 8.023128 TCAAATTGCAAGAGCTAAATAGAACAC 58.977 33.333 4.94 0.00 42.74 3.32
3334 3516 1.086696 AATCTTCAATGTCGGTGCCG 58.913 50.000 3.94 3.94 41.35 5.69
3390 3572 3.280295 CTCTTTTGGCTCTCATCAGCAT 58.720 45.455 0.00 0.00 41.65 3.79
3437 3619 5.598416 ATTATTCCAAAGGGCAAAGTAGC 57.402 39.130 0.00 0.00 0.00 3.58
3451 3633 7.754624 TCAATAACAGCCTCCATATTATTCCA 58.245 34.615 0.00 0.00 0.00 3.53
3453 3635 9.066892 TGTTCAATAACAGCCTCCATATTATTC 57.933 33.333 0.00 0.00 40.69 1.75
3471 3653 8.318412 TCCTGTAGAAGCATTAACTGTTCAATA 58.682 33.333 0.00 0.00 0.00 1.90
3473 3655 6.530120 TCCTGTAGAAGCATTAACTGTTCAA 58.470 36.000 0.00 0.00 0.00 2.69
3525 3707 3.149196 GAGATCCTTCACTTTTGCCACA 58.851 45.455 0.00 0.00 0.00 4.17
3639 3822 8.795513 TGAATGAAATGGATTGATGCGTTATAT 58.204 29.630 0.00 0.00 0.00 0.86
3680 3863 4.216902 TCCTGTGAGCATGTTGATCAAAAG 59.783 41.667 10.35 4.26 44.97 2.27
3688 3871 8.246180 AGTAAAATATTTCCTGTGAGCATGTTG 58.754 33.333 0.10 0.00 0.00 3.33
3715 3898 9.789029 GTTACTTTGACGAATACTCAGTAAAAC 57.211 33.333 0.00 0.00 0.00 2.43
3716 3899 9.531942 TGTTACTTTGACGAATACTCAGTAAAA 57.468 29.630 0.00 0.00 0.00 1.52
3717 3900 9.701098 ATGTTACTTTGACGAATACTCAGTAAA 57.299 29.630 0.00 0.00 0.00 2.01
3719 3902 9.701098 AAATGTTACTTTGACGAATACTCAGTA 57.299 29.630 0.00 0.00 0.00 2.74
3720 3903 8.603242 AAATGTTACTTTGACGAATACTCAGT 57.397 30.769 0.00 0.00 0.00 3.41
3721 3904 9.878599 AAAAATGTTACTTTGACGAATACTCAG 57.121 29.630 0.00 0.00 0.00 3.35
3722 3905 9.872757 GAAAAATGTTACTTTGACGAATACTCA 57.127 29.630 0.00 0.00 0.00 3.41
3723 3906 9.326339 GGAAAAATGTTACTTTGACGAATACTC 57.674 33.333 0.00 0.00 0.00 2.59
3724 3907 9.063615 AGGAAAAATGTTACTTTGACGAATACT 57.936 29.630 0.00 0.00 0.00 2.12
3725 3908 9.326339 GAGGAAAAATGTTACTTTGACGAATAC 57.674 33.333 0.00 0.00 0.00 1.89
3726 3909 8.225107 CGAGGAAAAATGTTACTTTGACGAATA 58.775 33.333 0.00 0.00 0.00 1.75
3728 3911 6.037391 ACGAGGAAAAATGTTACTTTGACGAA 59.963 34.615 0.00 0.00 0.00 3.85
3729 3912 5.524646 ACGAGGAAAAATGTTACTTTGACGA 59.475 36.000 0.00 0.00 0.00 4.20
3730 3913 5.744490 ACGAGGAAAAATGTTACTTTGACG 58.256 37.500 0.00 0.00 0.00 4.35
3731 3914 8.718734 AGATACGAGGAAAAATGTTACTTTGAC 58.281 33.333 0.00 0.00 0.00 3.18
3732 3915 8.842358 AGATACGAGGAAAAATGTTACTTTGA 57.158 30.769 0.00 0.00 0.00 2.69
3733 3916 9.893305 AAAGATACGAGGAAAAATGTTACTTTG 57.107 29.630 0.00 0.00 0.00 2.77
3734 3917 9.893305 CAAAGATACGAGGAAAAATGTTACTTT 57.107 29.630 0.00 0.00 0.00 2.66
3735 3918 9.280174 TCAAAGATACGAGGAAAAATGTTACTT 57.720 29.630 0.00 0.00 0.00 2.24
3736 3919 8.842358 TCAAAGATACGAGGAAAAATGTTACT 57.158 30.769 0.00 0.00 0.00 2.24
3737 3920 9.887406 TTTCAAAGATACGAGGAAAAATGTTAC 57.113 29.630 0.00 0.00 0.00 2.50
3739 3922 9.244799 GTTTTCAAAGATACGAGGAAAAATGTT 57.755 29.630 0.00 0.00 38.66 2.71
3740 3923 7.865889 GGTTTTCAAAGATACGAGGAAAAATGT 59.134 33.333 0.00 0.00 38.66 2.71
3741 3924 7.865385 TGGTTTTCAAAGATACGAGGAAAAATG 59.135 33.333 0.00 0.00 38.66 2.32
3745 3928 6.945938 TTGGTTTTCAAAGATACGAGGAAA 57.054 33.333 0.00 0.00 31.46 3.13
3780 3963 0.112995 TTGCAAGAGTGAAGGCCCAT 59.887 50.000 0.00 0.00 0.00 4.00
3781 3964 0.823356 GTTGCAAGAGTGAAGGCCCA 60.823 55.000 0.00 0.00 0.00 5.36
3782 3965 1.527433 GGTTGCAAGAGTGAAGGCCC 61.527 60.000 0.00 0.00 0.00 5.80
3783 3966 1.527433 GGGTTGCAAGAGTGAAGGCC 61.527 60.000 0.00 0.00 0.00 5.19
3784 3967 1.527433 GGGGTTGCAAGAGTGAAGGC 61.527 60.000 0.00 0.00 0.00 4.35
3785 3968 0.111253 AGGGGTTGCAAGAGTGAAGG 59.889 55.000 0.00 0.00 0.00 3.46
3786 3969 2.859165 TAGGGGTTGCAAGAGTGAAG 57.141 50.000 0.00 0.00 0.00 3.02
3787 3970 2.642311 TCATAGGGGTTGCAAGAGTGAA 59.358 45.455 0.00 0.00 0.00 3.18
3788 3971 2.265367 TCATAGGGGTTGCAAGAGTGA 58.735 47.619 0.00 0.00 0.00 3.41
3789 3972 2.787473 TCATAGGGGTTGCAAGAGTG 57.213 50.000 0.00 0.00 0.00 3.51
3790 3973 4.019174 CAATTCATAGGGGTTGCAAGAGT 58.981 43.478 0.00 0.00 0.00 3.24
3791 3974 3.382546 CCAATTCATAGGGGTTGCAAGAG 59.617 47.826 0.00 0.00 0.00 2.85
3792 3975 3.245586 ACCAATTCATAGGGGTTGCAAGA 60.246 43.478 0.00 0.00 0.00 3.02
3793 3976 3.099141 ACCAATTCATAGGGGTTGCAAG 58.901 45.455 0.00 0.00 0.00 4.01
3794 3977 3.096092 GACCAATTCATAGGGGTTGCAA 58.904 45.455 0.00 0.00 32.77 4.08
3795 3978 2.311542 AGACCAATTCATAGGGGTTGCA 59.688 45.455 0.00 0.00 32.77 4.08
3796 3979 3.018423 AGACCAATTCATAGGGGTTGC 57.982 47.619 0.00 0.00 32.77 4.17
3797 3980 5.755849 ACTTAGACCAATTCATAGGGGTTG 58.244 41.667 0.00 0.00 32.77 3.77
3798 3981 6.011981 TCAACTTAGACCAATTCATAGGGGTT 60.012 38.462 0.00 0.00 32.77 4.11
3799 3982 5.491078 TCAACTTAGACCAATTCATAGGGGT 59.509 40.000 0.00 0.00 36.05 4.95
3800 3983 5.823045 GTCAACTTAGACCAATTCATAGGGG 59.177 44.000 0.00 0.00 32.36 4.79
3801 3984 5.523916 CGTCAACTTAGACCAATTCATAGGG 59.476 44.000 0.00 0.00 35.07 3.53
3802 3985 6.255887 GTCGTCAACTTAGACCAATTCATAGG 59.744 42.308 0.00 0.00 35.07 2.57
3803 3986 6.020599 CGTCGTCAACTTAGACCAATTCATAG 60.021 42.308 0.00 0.00 35.07 2.23
3804 3987 5.803461 CGTCGTCAACTTAGACCAATTCATA 59.197 40.000 0.00 0.00 35.07 2.15
3805 3988 4.625742 CGTCGTCAACTTAGACCAATTCAT 59.374 41.667 0.00 0.00 35.07 2.57
3806 3989 3.985279 CGTCGTCAACTTAGACCAATTCA 59.015 43.478 0.00 0.00 35.07 2.57
3807 3990 3.367025 CCGTCGTCAACTTAGACCAATTC 59.633 47.826 0.00 0.00 35.07 2.17
3808 3991 3.006110 TCCGTCGTCAACTTAGACCAATT 59.994 43.478 0.00 0.00 35.07 2.32
3809 3992 2.559668 TCCGTCGTCAACTTAGACCAAT 59.440 45.455 0.00 0.00 35.07 3.16
3810 3993 1.955778 TCCGTCGTCAACTTAGACCAA 59.044 47.619 0.00 0.00 35.07 3.67
3811 3994 1.608055 TCCGTCGTCAACTTAGACCA 58.392 50.000 0.00 0.00 35.07 4.02
3812 3995 2.712057 TTCCGTCGTCAACTTAGACC 57.288 50.000 0.00 0.00 35.07 3.85
3813 3996 4.047142 AGTTTTCCGTCGTCAACTTAGAC 58.953 43.478 0.00 0.00 35.19 2.59
3814 3997 4.293415 GAGTTTTCCGTCGTCAACTTAGA 58.707 43.478 3.33 0.00 29.43 2.10
3815 3998 3.427863 GGAGTTTTCCGTCGTCAACTTAG 59.572 47.826 3.33 0.00 32.79 2.18
3816 3999 3.383761 GGAGTTTTCCGTCGTCAACTTA 58.616 45.455 3.33 0.00 32.79 2.24
3817 4000 2.207590 GGAGTTTTCCGTCGTCAACTT 58.792 47.619 3.33 0.00 32.79 2.66
3818 4001 1.861971 GGAGTTTTCCGTCGTCAACT 58.138 50.000 1.70 1.70 32.79 3.16
3838 4021 3.569194 TTACTTTGACAGGTCCAGCAA 57.431 42.857 0.00 0.00 0.00 3.91
3845 4028 6.827727 ACACAAGTAGATTACTTTGACAGGT 58.172 36.000 13.20 2.12 46.27 4.00
3884 4067 4.397481 TGCTGACTATGAGAATCCAGTG 57.603 45.455 0.00 0.00 30.57 3.66
3911 4095 3.251004 AGAAGTTTTCATCGGCAGACAAC 59.749 43.478 0.00 0.00 0.00 3.32
3920 4104 3.669023 GCTCCAGCAAGAAGTTTTCATCG 60.669 47.826 0.00 0.00 41.59 3.84
4043 4228 3.884693 TCGTACTCATGAAATACCGCCTA 59.115 43.478 0.00 0.00 0.00 3.93
4205 4390 6.822667 AGTCATCTATCAAACATGCAACAA 57.177 33.333 0.00 0.00 0.00 2.83
4207 4392 6.425504 GCTAGTCATCTATCAAACATGCAAC 58.574 40.000 0.00 0.00 0.00 4.17
4208 4393 5.234972 CGCTAGTCATCTATCAAACATGCAA 59.765 40.000 0.00 0.00 0.00 4.08
4231 4417 5.571357 GCACTAAACCATAAAATCAACACCG 59.429 40.000 0.00 0.00 0.00 4.94
4272 4458 1.778017 TTACTGGGAGCAGCAAGGCA 61.778 55.000 0.00 0.00 35.83 4.75
4305 4494 3.013921 GTCCATCAAACCCGAAATAGCA 58.986 45.455 0.00 0.00 0.00 3.49
4392 4581 8.737168 TGCTAACTTCTCTAATGCAACAATAT 57.263 30.769 0.00 0.00 0.00 1.28
4424 4613 5.520748 AAGTTGAAGAACTACCATGGGAT 57.479 39.130 18.09 0.00 41.87 3.85
4444 4633 7.678218 GCACTGATGATTTTCCTTAGCAGTAAG 60.678 40.741 0.00 0.00 33.99 2.34
4455 4644 8.677300 TGTCTATTTTAGCACTGATGATTTTCC 58.323 33.333 0.00 0.00 0.00 3.13
4471 4660 9.123902 CATCCACCTCATTTCATGTCTATTTTA 57.876 33.333 0.00 0.00 0.00 1.52
4488 4678 4.754114 GCAGATTCATCTTACATCCACCTC 59.246 45.833 0.00 0.00 34.22 3.85
4607 4811 9.793252 GATATCAGAACAATTACAAACAGCATT 57.207 29.630 0.00 0.00 0.00 3.56
4608 4812 9.182214 AGATATCAGAACAATTACAAACAGCAT 57.818 29.630 5.32 0.00 0.00 3.79
4609 4813 8.565896 AGATATCAGAACAATTACAAACAGCA 57.434 30.769 5.32 0.00 0.00 4.41
4610 4814 9.846248 AAAGATATCAGAACAATTACAAACAGC 57.154 29.630 5.32 0.00 0.00 4.40
4637 4842 5.406649 TGGTTGCTGACTGTAAAACTTTTG 58.593 37.500 0.00 0.00 0.00 2.44
4660 4865 3.138884 TGCTTACCACATGTGTCACAT 57.861 42.857 23.79 12.87 39.91 3.21
4661 4866 2.616376 GTTGCTTACCACATGTGTCACA 59.384 45.455 23.79 8.40 0.00 3.58
4662 4867 2.031157 GGTTGCTTACCACATGTGTCAC 60.031 50.000 23.79 9.40 46.92 3.67
4663 4868 2.226330 GGTTGCTTACCACATGTGTCA 58.774 47.619 23.79 8.71 46.92 3.58
4664 4869 2.989422 GGTTGCTTACCACATGTGTC 57.011 50.000 23.79 8.37 46.92 3.67
4697 4902 9.783256 GACTTTTAAACAGTGTTGACATACTTT 57.217 29.630 9.79 0.00 0.00 2.66
4698 4903 8.952278 TGACTTTTAAACAGTGTTGACATACTT 58.048 29.630 9.79 0.00 0.00 2.24
4699 4904 8.500753 TGACTTTTAAACAGTGTTGACATACT 57.499 30.769 9.79 0.00 0.00 2.12
4700 4905 7.376072 GCTGACTTTTAAACAGTGTTGACATAC 59.624 37.037 9.79 0.41 34.60 2.39
4701 4906 7.066404 TGCTGACTTTTAAACAGTGTTGACATA 59.934 33.333 9.79 0.00 34.60 2.29
4702 4907 6.127758 TGCTGACTTTTAAACAGTGTTGACAT 60.128 34.615 9.79 0.00 34.60 3.06
4703 4908 5.182190 TGCTGACTTTTAAACAGTGTTGACA 59.818 36.000 9.79 2.57 34.60 3.58
4704 4909 5.636837 TGCTGACTTTTAAACAGTGTTGAC 58.363 37.500 9.79 0.00 34.60 3.18
4712 4917 5.652994 AAACCACTGCTGACTTTTAAACA 57.347 34.783 0.00 0.00 0.00 2.83
4713 4918 8.642908 ATTTAAACCACTGCTGACTTTTAAAC 57.357 30.769 15.55 0.00 33.53 2.01
4722 4927 4.321899 GCCAATGATTTAAACCACTGCTGA 60.322 41.667 0.00 0.00 0.00 4.26
4750 4955 9.681062 ATTAACCACTGCTAGCTTTATTCTTAA 57.319 29.630 17.23 9.08 0.00 1.85
4759 4964 3.933332 GACGAATTAACCACTGCTAGCTT 59.067 43.478 17.23 3.72 0.00 3.74
4761 4966 2.281762 CGACGAATTAACCACTGCTAGC 59.718 50.000 8.10 8.10 0.00 3.42
4762 4967 2.858344 CCGACGAATTAACCACTGCTAG 59.142 50.000 0.00 0.00 0.00 3.42
4763 4968 2.883574 CCGACGAATTAACCACTGCTA 58.116 47.619 0.00 0.00 0.00 3.49
4764 4969 1.722011 CCGACGAATTAACCACTGCT 58.278 50.000 0.00 0.00 0.00 4.24
4765 4970 0.096454 GCCGACGAATTAACCACTGC 59.904 55.000 0.00 0.00 0.00 4.40
4766 4971 1.722011 AGCCGACGAATTAACCACTG 58.278 50.000 0.00 0.00 0.00 3.66
4767 4972 2.467566 AAGCCGACGAATTAACCACT 57.532 45.000 0.00 0.00 0.00 4.00
4768 4973 3.187842 AGAAAAGCCGACGAATTAACCAC 59.812 43.478 0.00 0.00 0.00 4.16
4769 4974 3.404899 AGAAAAGCCGACGAATTAACCA 58.595 40.909 0.00 0.00 0.00 3.67
4770 4975 5.349543 TCTTAGAAAAGCCGACGAATTAACC 59.650 40.000 0.00 0.00 32.36 2.85
4771 4976 6.399204 TCTTAGAAAAGCCGACGAATTAAC 57.601 37.500 0.00 0.00 32.36 2.01
4779 4987 6.543736 CCTTGTTATTCTTAGAAAAGCCGAC 58.456 40.000 0.00 0.00 32.36 4.79
4780 4988 5.123344 GCCTTGTTATTCTTAGAAAAGCCGA 59.877 40.000 0.00 0.00 32.36 5.54
4804 5012 2.622436 GGAACCTGATCCTTCTTGTCG 58.378 52.381 0.00 0.00 36.50 4.35
4835 5056 8.827177 ACGTTCTCTTCAATTTGTGTAGATTA 57.173 30.769 0.00 0.00 33.62 1.75
4836 5057 7.730364 ACGTTCTCTTCAATTTGTGTAGATT 57.270 32.000 0.00 0.00 33.62 2.40
4837 5058 7.730364 AACGTTCTCTTCAATTTGTGTAGAT 57.270 32.000 0.00 0.00 33.62 1.98
4838 5059 8.708742 CATAACGTTCTCTTCAATTTGTGTAGA 58.291 33.333 2.82 0.00 33.11 2.59
4839 5060 7.478667 GCATAACGTTCTCTTCAATTTGTGTAG 59.521 37.037 2.82 0.00 0.00 2.74
4840 5061 7.295201 GCATAACGTTCTCTTCAATTTGTGTA 58.705 34.615 2.82 0.00 0.00 2.90
4842 5063 5.569059 GGCATAACGTTCTCTTCAATTTGTG 59.431 40.000 2.82 0.00 0.00 3.33
4844 5065 5.095490 GGGCATAACGTTCTCTTCAATTTG 58.905 41.667 2.82 0.00 0.00 2.32
4845 5066 5.010282 AGGGCATAACGTTCTCTTCAATTT 58.990 37.500 2.82 0.00 0.00 1.82
4847 5068 4.192317 GAGGGCATAACGTTCTCTTCAAT 58.808 43.478 2.82 0.00 0.00 2.57
4848 5069 3.007506 TGAGGGCATAACGTTCTCTTCAA 59.992 43.478 2.82 0.00 0.00 2.69
4849 5070 2.565391 TGAGGGCATAACGTTCTCTTCA 59.435 45.455 2.82 2.61 0.00 3.02
4850 5071 3.247006 TGAGGGCATAACGTTCTCTTC 57.753 47.619 2.82 0.00 0.00 2.87
4858 5079 2.810274 CCAAGATGATGAGGGCATAACG 59.190 50.000 0.00 0.00 34.11 3.18
4873 5094 7.295672 TCCTGATATTCTTTATCACCCCAAGAT 59.704 37.037 0.00 0.00 31.39 2.40
4913 5135 1.694150 AGCTGGCCTTCTTATATCGCA 59.306 47.619 3.32 0.00 0.00 5.10
4937 5159 7.770897 ACAGGGTAGACTTTTGCTTAGAATATG 59.229 37.037 0.00 0.00 0.00 1.78
5038 5262 2.093890 TCGTACATAAAGTCGCCCTGA 58.906 47.619 0.00 0.00 0.00 3.86
5047 5271 5.867174 TGTGGTTCTGTCATCGTACATAAAG 59.133 40.000 0.00 0.00 0.00 1.85
5063 5287 6.716628 TGCTCATTATTTTCTCTTGTGGTTCT 59.283 34.615 0.00 0.00 0.00 3.01
5112 5340 7.775053 TGTATTGAAGTGCTCCCTTTATTTT 57.225 32.000 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.