Multiple sequence alignment - TraesCS1A01G364600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G364600 chr1A 100.000 6169 0 0 1471 7639 544371385 544377553 0.000000e+00 11393.0
1 TraesCS1A01G364600 chr1A 100.000 1065 0 0 1 1065 544369915 544370979 0.000000e+00 1967.0
2 TraesCS1A01G364600 chr1A 95.951 247 10 0 4673 4919 19390004 19389758 1.190000e-107 401.0
3 TraesCS1A01G364600 chr1A 95.219 251 12 0 4673 4923 19275856 19275606 1.540000e-106 398.0
4 TraesCS1A01G364600 chr1A 90.000 100 9 1 7535 7634 590096239 590096337 2.240000e-25 128.0
5 TraesCS1A01G364600 chr1A 96.296 54 1 1 6920 6972 544376780 544376833 3.800000e-13 87.9
6 TraesCS1A01G364600 chr1A 96.296 54 1 1 6866 6919 544376834 544376886 3.800000e-13 87.9
7 TraesCS1A01G364600 chr1D 93.859 1889 80 20 5761 7634 448655321 448657188 0.000000e+00 2813.0
8 TraesCS1A01G364600 chr1D 94.241 1476 67 12 3461 4923 448653709 448655179 0.000000e+00 2239.0
9 TraesCS1A01G364600 chr1D 91.869 1193 61 9 2207 3394 448652203 448653364 0.000000e+00 1633.0
10 TraesCS1A01G364600 chr1D 93.898 590 33 3 1471 2059 448651616 448652203 0.000000e+00 887.0
11 TraesCS1A01G364600 chr1D 90.299 536 31 12 186 717 448647428 448647946 0.000000e+00 682.0
12 TraesCS1A01G364600 chr1D 96.961 362 7 1 708 1065 448651171 448651532 8.480000e-169 604.0
13 TraesCS1A01G364600 chr1D 85.921 277 29 8 186 460 448649237 448649505 3.490000e-73 287.0
14 TraesCS1A01G364600 chr1D 100.000 53 0 0 6920 6972 448656423 448656475 1.750000e-16 99.0
15 TraesCS1A01G364600 chr1D 91.176 68 5 1 5674 5740 448655261 448655328 2.940000e-14 91.6
16 TraesCS1A01G364600 chr1D 96.296 54 1 1 6866 6919 448656476 448656528 3.800000e-13 87.9
17 TraesCS1A01G364600 chr1B 92.328 1929 117 17 1492 3411 614451314 614453220 0.000000e+00 2713.0
18 TraesCS1A01G364600 chr1B 95.125 1395 62 4 5761 7151 614454976 614456368 0.000000e+00 2194.0
19 TraesCS1A01G364600 chr1B 93.249 1422 78 9 3515 4923 614453429 614454845 0.000000e+00 2078.0
20 TraesCS1A01G364600 chr1B 83.015 889 73 38 186 1042 614450164 614451006 0.000000e+00 734.0
21 TraesCS1A01G364600 chr1B 92.424 198 13 2 7134 7331 614456393 614456588 1.620000e-71 281.0
22 TraesCS1A01G364600 chr1B 95.455 66 3 0 5675 5740 614454918 614454983 1.050000e-18 106.0
23 TraesCS1A01G364600 chr1B 96.296 54 1 1 6920 6972 614456082 614456135 3.800000e-13 87.9
24 TraesCS1A01G364600 chr1B 92.593 54 3 1 6866 6919 614456136 614456188 8.220000e-10 76.8
25 TraesCS1A01G364600 chr5A 93.870 783 21 3 4919 5675 342653665 342654446 0.000000e+00 1155.0
26 TraesCS1A01G364600 chr5A 96.761 247 8 0 4673 4919 603032351 603032597 5.520000e-111 412.0
27 TraesCS1A01G364600 chr5A 95.618 251 11 0 4673 4923 677628683 677628433 3.320000e-108 403.0
28 TraesCS1A01G364600 chr5A 93.506 77 4 1 5043 5119 342653859 342653934 6.270000e-21 113.0
29 TraesCS1A01G364600 chr5A 93.421 76 4 1 5113 5187 342653791 342653866 2.250000e-20 111.0
30 TraesCS1A01G364600 chr3D 97.104 656 18 1 3881 4535 112210829 112210174 0.000000e+00 1105.0
31 TraesCS1A01G364600 chr3D 95.349 301 13 1 3878 4177 96784082 96784382 1.930000e-130 477.0
32 TraesCS1A01G364600 chr3D 95.023 221 10 1 4534 4754 112210092 112209873 5.670000e-91 346.0
33 TraesCS1A01G364600 chr7A 93.862 668 6 6 5034 5685 33898455 33899103 0.000000e+00 974.0
34 TraesCS1A01G364600 chr7A 91.860 172 7 4 5017 5187 33898375 33898540 4.610000e-57 233.0
35 TraesCS1A01G364600 chr7A 84.821 112 6 8 413 520 27382982 27383086 1.360000e-17 102.0
36 TraesCS1A01G364600 chr7A 96.226 53 2 0 5112 5164 33898401 33898453 3.800000e-13 87.9
37 TraesCS1A01G364600 chr7B 86.609 814 52 24 4919 5679 39104921 39104112 0.000000e+00 846.0
38 TraesCS1A01G364600 chr7B 97.211 251 7 0 4673 4923 126041004 126040754 7.090000e-115 425.0
39 TraesCS1A01G364600 chr7B 95.506 178 8 0 5498 5675 735953750 735953573 1.250000e-72 285.0
40 TraesCS1A01G364600 chr3B 97.211 251 7 0 4673 4923 725606858 725607108 7.090000e-115 425.0
41 TraesCS1A01G364600 chr3B 96.414 251 9 0 4673 4923 413315003 413315253 1.530000e-111 414.0
42 TraesCS1A01G364600 chr2B 98.052 154 3 0 4024 4177 75660215 75660368 1.260000e-67 268.0
43 TraesCS1A01G364600 chr2B 96.178 157 6 0 4024 4180 56588212 56588056 2.740000e-64 257.0
44 TraesCS1A01G364600 chr2B 97.368 38 1 0 5523 5560 676479693 676479730 1.780000e-06 65.8
45 TraesCS1A01G364600 chrUn 97.351 151 4 0 4024 4174 199439041 199439191 2.740000e-64 257.0
46 TraesCS1A01G364600 chrUn 97.351 151 4 0 4024 4174 237714456 237714606 2.740000e-64 257.0
47 TraesCS1A01G364600 chrUn 97.351 151 4 0 4024 4174 368390983 368391133 2.740000e-64 257.0
48 TraesCS1A01G364600 chr5D 79.565 230 34 10 5461 5678 515415245 515415017 1.330000e-32 152.0
49 TraesCS1A01G364600 chr5D 80.114 176 20 11 321 490 481421902 481421736 4.840000e-22 117.0
50 TraesCS1A01G364600 chr6D 81.053 190 24 10 318 502 447815467 447815285 2.870000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G364600 chr1A 544369915 544377553 7638 False 3383.950000 11393 98.148000 1 7639 4 chr1A.!!$F2 7638
1 TraesCS1A01G364600 chr1D 448647428 448657188 9760 False 942.350000 2813 93.452000 186 7634 10 chr1D.!!$F1 7448
2 TraesCS1A01G364600 chr1B 614450164 614456588 6424 False 1033.837500 2713 92.560625 186 7331 8 chr1B.!!$F1 7145
3 TraesCS1A01G364600 chr5A 342653665 342654446 781 False 459.666667 1155 93.599000 4919 5675 3 chr5A.!!$F2 756
4 TraesCS1A01G364600 chr3D 112209873 112210829 956 True 725.500000 1105 96.063500 3881 4754 2 chr3D.!!$R1 873
5 TraesCS1A01G364600 chr7A 33898375 33899103 728 False 431.633333 974 93.982667 5017 5685 3 chr7A.!!$F2 668
6 TraesCS1A01G364600 chr7B 39104112 39104921 809 True 846.000000 846 86.609000 4919 5679 1 chr7B.!!$R1 760

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
131 132 0.028505 CGCCTTCTCGCAATTCATGG 59.971 55.000 0.00 0.00 0.00 3.66 F
147 148 0.034089 ATGGCTAGAAGGTGGGCAAC 60.034 55.000 0.00 0.00 45.80 4.17 F
149 150 0.034089 GGCTAGAAGGTGGGCAACAT 60.034 55.000 0.00 0.00 39.74 2.71 F
1925 5193 0.322456 TCTATTGTGTGCCCACTGCC 60.322 55.000 0.00 0.00 42.34 4.85 F
2295 5563 0.331278 CAAGGGTCCATTACTGGCCA 59.669 55.000 4.71 4.71 42.80 5.36 F
3427 6701 0.671796 AGCGGGTTAACAAAAGGTGC 59.328 50.000 8.10 0.44 0.00 5.01 F
3471 6899 0.881600 CCCAGTTTTTGGCAAGCAGC 60.882 55.000 0.00 0.00 46.32 5.25 F
4919 8573 0.318107 CCAAGCAGGCTTTGTTGTCG 60.318 55.000 3.30 0.00 33.42 4.35 F
4923 8577 1.602377 AGCAGGCTTTGTTGTCGTTAC 59.398 47.619 0.00 0.00 0.00 2.50 F
5820 9597 1.971505 CTTCATGCCCTGCGGACCTA 61.972 60.000 0.00 0.00 0.00 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1851 5119 0.179073 CTACATGGGAAGGCAGGACG 60.179 60.000 0.00 0.0 0.00 4.79 R
2139 5407 1.337703 CCCACAACATATTGGCATCCG 59.662 52.381 0.00 0.0 40.42 4.18 R
2152 5420 3.668386 GCTACCACAGCCCACAAC 58.332 61.111 0.00 0.0 45.23 3.32 R
3458 6886 0.751452 TCACATGCTGCTTGCCAAAA 59.249 45.000 14.63 0.0 42.00 2.44 R
3630 7186 2.262915 CCTCCACCTGTCGAGCAC 59.737 66.667 0.00 0.0 0.00 4.40 R
4724 8375 0.820871 GTGACTCTAGCACCCTGAGG 59.179 60.000 0.00 0.0 40.04 3.86 R
4971 8636 1.555477 GCCAACGTGAACCAAACAAG 58.445 50.000 0.00 0.0 0.00 3.16 R
5810 9587 0.108186 TGCACTTGATAGGTCCGCAG 60.108 55.000 0.00 0.0 0.00 5.18 R
6123 9901 0.950836 TTCCCATCACTGCACAAACG 59.049 50.000 0.00 0.0 0.00 3.60 R
7435 11268 0.033011 TCAGGGCCTAGAGAGTCACC 60.033 60.000 5.28 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.281332 TTCCTTTAGGCACCATGGC 57.719 52.632 13.04 0.00 44.10 4.40
26 27 3.792736 GCACCATGGCGGAGGGTA 61.793 66.667 13.04 0.00 36.25 3.69
27 28 3.120086 GCACCATGGCGGAGGGTAT 62.120 63.158 13.04 0.00 36.25 2.73
28 29 1.227943 CACCATGGCGGAGGGTATG 60.228 63.158 13.04 0.00 36.25 2.39
29 30 1.692749 ACCATGGCGGAGGGTATGT 60.693 57.895 13.04 0.00 36.81 2.29
30 31 1.279025 ACCATGGCGGAGGGTATGTT 61.279 55.000 13.04 0.00 36.81 2.71
31 32 0.819259 CCATGGCGGAGGGTATGTTG 60.819 60.000 0.00 0.00 36.56 3.33
32 33 0.180171 CATGGCGGAGGGTATGTTGA 59.820 55.000 0.00 0.00 0.00 3.18
33 34 1.140312 ATGGCGGAGGGTATGTTGAT 58.860 50.000 0.00 0.00 0.00 2.57
34 35 0.468226 TGGCGGAGGGTATGTTGATC 59.532 55.000 0.00 0.00 0.00 2.92
35 36 0.759346 GGCGGAGGGTATGTTGATCT 59.241 55.000 0.00 0.00 0.00 2.75
36 37 1.141053 GGCGGAGGGTATGTTGATCTT 59.859 52.381 0.00 0.00 0.00 2.40
37 38 2.213499 GCGGAGGGTATGTTGATCTTG 58.787 52.381 0.00 0.00 0.00 3.02
38 39 2.158957 GCGGAGGGTATGTTGATCTTGA 60.159 50.000 0.00 0.00 0.00 3.02
39 40 3.495100 GCGGAGGGTATGTTGATCTTGAT 60.495 47.826 0.00 0.00 0.00 2.57
40 41 4.708177 CGGAGGGTATGTTGATCTTGATT 58.292 43.478 0.00 0.00 0.00 2.57
41 42 5.741964 GCGGAGGGTATGTTGATCTTGATTA 60.742 44.000 0.00 0.00 0.00 1.75
42 43 5.696724 CGGAGGGTATGTTGATCTTGATTAC 59.303 44.000 0.00 0.00 0.00 1.89
43 44 5.998363 GGAGGGTATGTTGATCTTGATTACC 59.002 44.000 0.00 0.00 0.00 2.85
44 45 5.941788 AGGGTATGTTGATCTTGATTACCC 58.058 41.667 14.90 14.90 45.00 3.69
45 46 5.941788 GGGTATGTTGATCTTGATTACCCT 58.058 41.667 15.22 0.58 42.56 4.34
46 47 5.765182 GGGTATGTTGATCTTGATTACCCTG 59.235 44.000 15.22 0.00 42.56 4.45
47 48 6.409234 GGGTATGTTGATCTTGATTACCCTGA 60.409 42.308 15.22 0.00 42.56 3.86
48 49 7.054124 GGTATGTTGATCTTGATTACCCTGAA 58.946 38.462 0.00 0.00 0.00 3.02
49 50 7.227512 GGTATGTTGATCTTGATTACCCTGAAG 59.772 40.741 0.00 0.00 0.00 3.02
50 51 6.126863 TGTTGATCTTGATTACCCTGAAGT 57.873 37.500 0.00 0.00 0.00 3.01
51 52 6.173339 TGTTGATCTTGATTACCCTGAAGTC 58.827 40.000 0.00 0.00 0.00 3.01
52 53 6.173339 GTTGATCTTGATTACCCTGAAGTCA 58.827 40.000 0.00 0.00 0.00 3.41
53 54 6.566079 TGATCTTGATTACCCTGAAGTCAT 57.434 37.500 0.00 0.00 0.00 3.06
54 55 6.351711 TGATCTTGATTACCCTGAAGTCATG 58.648 40.000 0.00 0.00 0.00 3.07
55 56 6.156775 TGATCTTGATTACCCTGAAGTCATGA 59.843 38.462 0.00 0.00 0.00 3.07
56 57 6.566079 TCTTGATTACCCTGAAGTCATGAT 57.434 37.500 0.00 0.00 0.00 2.45
57 58 6.586344 TCTTGATTACCCTGAAGTCATGATC 58.414 40.000 0.00 0.00 0.00 2.92
58 59 4.948847 TGATTACCCTGAAGTCATGATCG 58.051 43.478 0.00 0.00 0.00 3.69
59 60 3.819564 TTACCCTGAAGTCATGATCGG 57.180 47.619 0.00 0.00 0.00 4.18
60 61 0.833287 ACCCTGAAGTCATGATCGGG 59.167 55.000 14.93 14.93 41.05 5.14
61 62 0.533755 CCCTGAAGTCATGATCGGGC 60.534 60.000 16.06 0.00 40.21 6.13
62 63 0.467384 CCTGAAGTCATGATCGGGCT 59.533 55.000 10.58 0.00 35.42 5.19
63 64 1.134280 CCTGAAGTCATGATCGGGCTT 60.134 52.381 10.58 3.95 35.42 4.35
64 65 2.636830 CTGAAGTCATGATCGGGCTTT 58.363 47.619 0.00 0.00 0.00 3.51
65 66 3.432186 CCTGAAGTCATGATCGGGCTTTA 60.432 47.826 10.58 1.61 35.42 1.85
66 67 4.384056 CTGAAGTCATGATCGGGCTTTAT 58.616 43.478 0.00 0.00 0.00 1.40
67 68 4.129380 TGAAGTCATGATCGGGCTTTATG 58.871 43.478 0.00 0.00 0.00 1.90
68 69 4.141733 TGAAGTCATGATCGGGCTTTATGA 60.142 41.667 0.00 0.00 0.00 2.15
69 70 4.000331 AGTCATGATCGGGCTTTATGAG 58.000 45.455 0.00 0.00 0.00 2.90
70 71 3.643320 AGTCATGATCGGGCTTTATGAGA 59.357 43.478 0.00 0.00 0.00 3.27
71 72 4.285517 AGTCATGATCGGGCTTTATGAGAT 59.714 41.667 0.00 0.00 0.00 2.75
72 73 4.391216 GTCATGATCGGGCTTTATGAGATG 59.609 45.833 0.00 0.00 0.00 2.90
73 74 4.040829 TCATGATCGGGCTTTATGAGATGT 59.959 41.667 0.00 0.00 0.00 3.06
74 75 3.995199 TGATCGGGCTTTATGAGATGTC 58.005 45.455 0.00 0.00 0.00 3.06
75 76 3.643320 TGATCGGGCTTTATGAGATGTCT 59.357 43.478 0.00 0.00 0.00 3.41
76 77 4.832823 TGATCGGGCTTTATGAGATGTCTA 59.167 41.667 0.00 0.00 0.00 2.59
77 78 4.585955 TCGGGCTTTATGAGATGTCTAC 57.414 45.455 0.00 0.00 0.00 2.59
78 79 4.215908 TCGGGCTTTATGAGATGTCTACT 58.784 43.478 0.00 0.00 0.00 2.57
79 80 4.649674 TCGGGCTTTATGAGATGTCTACTT 59.350 41.667 0.00 0.00 0.00 2.24
80 81 5.128827 TCGGGCTTTATGAGATGTCTACTTT 59.871 40.000 0.00 0.00 0.00 2.66
81 82 6.322969 TCGGGCTTTATGAGATGTCTACTTTA 59.677 38.462 0.00 0.00 0.00 1.85
82 83 6.642950 CGGGCTTTATGAGATGTCTACTTTAG 59.357 42.308 0.00 0.00 0.00 1.85
83 84 7.501844 GGGCTTTATGAGATGTCTACTTTAGT 58.498 38.462 0.00 0.00 0.00 2.24
84 85 7.988028 GGGCTTTATGAGATGTCTACTTTAGTT 59.012 37.037 0.00 0.00 0.00 2.24
85 86 8.821894 GGCTTTATGAGATGTCTACTTTAGTTG 58.178 37.037 0.00 0.00 0.00 3.16
86 87 9.372369 GCTTTATGAGATGTCTACTTTAGTTGT 57.628 33.333 0.00 0.00 0.00 3.32
89 90 9.856488 TTATGAGATGTCTACTTTAGTTGTGAC 57.144 33.333 0.00 0.00 0.00 3.67
90 91 7.526142 TGAGATGTCTACTTTAGTTGTGACT 57.474 36.000 0.00 0.00 39.97 3.41
91 92 7.952671 TGAGATGTCTACTTTAGTTGTGACTT 58.047 34.615 0.00 0.00 37.33 3.01
92 93 7.867909 TGAGATGTCTACTTTAGTTGTGACTTG 59.132 37.037 0.00 0.00 37.33 3.16
93 94 7.155328 AGATGTCTACTTTAGTTGTGACTTGG 58.845 38.462 0.00 0.00 37.33 3.61
94 95 5.054477 TGTCTACTTTAGTTGTGACTTGGC 58.946 41.667 0.00 0.00 37.33 4.52
95 96 5.163343 TGTCTACTTTAGTTGTGACTTGGCT 60.163 40.000 0.00 0.00 37.33 4.75
96 97 5.758784 GTCTACTTTAGTTGTGACTTGGCTT 59.241 40.000 0.00 0.00 37.33 4.35
97 98 6.260271 GTCTACTTTAGTTGTGACTTGGCTTT 59.740 38.462 0.00 0.00 37.33 3.51
98 99 5.248870 ACTTTAGTTGTGACTTGGCTTTG 57.751 39.130 0.00 0.00 37.33 2.77
99 100 4.947388 ACTTTAGTTGTGACTTGGCTTTGA 59.053 37.500 0.00 0.00 37.33 2.69
100 101 5.594317 ACTTTAGTTGTGACTTGGCTTTGAT 59.406 36.000 0.00 0.00 37.33 2.57
101 102 6.770785 ACTTTAGTTGTGACTTGGCTTTGATA 59.229 34.615 0.00 0.00 37.33 2.15
102 103 6.554334 TTAGTTGTGACTTGGCTTTGATAC 57.446 37.500 0.00 0.00 37.33 2.24
103 104 3.821033 AGTTGTGACTTGGCTTTGATACC 59.179 43.478 0.00 0.00 29.87 2.73
104 105 2.790433 TGTGACTTGGCTTTGATACCC 58.210 47.619 0.00 0.00 0.00 3.69
105 106 2.375174 TGTGACTTGGCTTTGATACCCT 59.625 45.455 0.00 0.00 0.00 4.34
106 107 3.585289 TGTGACTTGGCTTTGATACCCTA 59.415 43.478 0.00 0.00 0.00 3.53
107 108 4.227300 TGTGACTTGGCTTTGATACCCTAT 59.773 41.667 0.00 0.00 0.00 2.57
108 109 4.576463 GTGACTTGGCTTTGATACCCTATG 59.424 45.833 0.00 0.00 0.00 2.23
109 110 4.227300 TGACTTGGCTTTGATACCCTATGT 59.773 41.667 0.00 0.00 0.00 2.29
110 111 5.193099 ACTTGGCTTTGATACCCTATGTT 57.807 39.130 0.00 0.00 0.00 2.71
111 112 6.069905 TGACTTGGCTTTGATACCCTATGTTA 60.070 38.462 0.00 0.00 0.00 2.41
112 113 6.120220 ACTTGGCTTTGATACCCTATGTTAC 58.880 40.000 0.00 0.00 0.00 2.50
113 114 4.699637 TGGCTTTGATACCCTATGTTACG 58.300 43.478 0.00 0.00 0.00 3.18
114 115 3.497262 GGCTTTGATACCCTATGTTACGC 59.503 47.826 0.00 0.00 0.00 4.42
115 116 3.497262 GCTTTGATACCCTATGTTACGCC 59.503 47.826 0.00 0.00 0.00 5.68
116 117 4.742743 GCTTTGATACCCTATGTTACGCCT 60.743 45.833 0.00 0.00 0.00 5.52
117 118 5.362105 TTTGATACCCTATGTTACGCCTT 57.638 39.130 0.00 0.00 0.00 4.35
118 119 4.595762 TGATACCCTATGTTACGCCTTC 57.404 45.455 0.00 0.00 0.00 3.46
119 120 4.220724 TGATACCCTATGTTACGCCTTCT 58.779 43.478 0.00 0.00 0.00 2.85
120 121 4.280174 TGATACCCTATGTTACGCCTTCTC 59.720 45.833 0.00 0.00 0.00 2.87
121 122 1.407979 ACCCTATGTTACGCCTTCTCG 59.592 52.381 0.00 0.00 0.00 4.04
122 123 1.488527 CCTATGTTACGCCTTCTCGC 58.511 55.000 0.00 0.00 0.00 5.03
123 124 1.202371 CCTATGTTACGCCTTCTCGCA 60.202 52.381 0.00 0.00 0.00 5.10
124 125 2.536365 CTATGTTACGCCTTCTCGCAA 58.464 47.619 0.00 0.00 0.00 4.85
125 126 2.024176 ATGTTACGCCTTCTCGCAAT 57.976 45.000 0.00 0.00 0.00 3.56
126 127 1.803334 TGTTACGCCTTCTCGCAATT 58.197 45.000 0.00 0.00 0.00 2.32
127 128 1.730064 TGTTACGCCTTCTCGCAATTC 59.270 47.619 0.00 0.00 0.00 2.17
128 129 1.730064 GTTACGCCTTCTCGCAATTCA 59.270 47.619 0.00 0.00 0.00 2.57
129 130 2.309528 TACGCCTTCTCGCAATTCAT 57.690 45.000 0.00 0.00 0.00 2.57
130 131 0.729116 ACGCCTTCTCGCAATTCATG 59.271 50.000 0.00 0.00 0.00 3.07
131 132 0.028505 CGCCTTCTCGCAATTCATGG 59.971 55.000 0.00 0.00 0.00 3.66
132 133 0.248784 GCCTTCTCGCAATTCATGGC 60.249 55.000 0.00 0.00 0.00 4.40
133 134 1.386533 CCTTCTCGCAATTCATGGCT 58.613 50.000 0.00 0.00 0.00 4.75
134 135 2.564771 CCTTCTCGCAATTCATGGCTA 58.435 47.619 0.00 0.00 0.00 3.93
135 136 2.547211 CCTTCTCGCAATTCATGGCTAG 59.453 50.000 0.00 0.00 0.00 3.42
136 137 3.461061 CTTCTCGCAATTCATGGCTAGA 58.539 45.455 0.00 0.00 31.01 2.43
137 138 3.541996 TCTCGCAATTCATGGCTAGAA 57.458 42.857 0.00 0.00 30.10 2.10
138 139 3.461061 TCTCGCAATTCATGGCTAGAAG 58.539 45.455 0.00 0.00 30.10 2.85
139 140 2.547211 CTCGCAATTCATGGCTAGAAGG 59.453 50.000 0.00 0.00 0.00 3.46
140 141 2.092968 TCGCAATTCATGGCTAGAAGGT 60.093 45.455 0.00 0.00 0.00 3.50
141 142 2.032550 CGCAATTCATGGCTAGAAGGTG 59.967 50.000 0.00 0.00 0.00 4.00
142 143 2.360165 GCAATTCATGGCTAGAAGGTGG 59.640 50.000 0.00 0.00 0.00 4.61
143 144 2.954318 CAATTCATGGCTAGAAGGTGGG 59.046 50.000 0.00 0.00 0.00 4.61
144 145 0.255890 TTCATGGCTAGAAGGTGGGC 59.744 55.000 0.00 0.00 0.00 5.36
145 146 0.913934 TCATGGCTAGAAGGTGGGCA 60.914 55.000 0.00 0.00 46.76 5.36
146 147 0.034186 CATGGCTAGAAGGTGGGCAA 60.034 55.000 0.00 0.00 45.80 4.52
147 148 0.034089 ATGGCTAGAAGGTGGGCAAC 60.034 55.000 0.00 0.00 45.80 4.17
148 149 1.378762 GGCTAGAAGGTGGGCAACA 59.621 57.895 0.00 0.00 39.74 3.33
149 150 0.034089 GGCTAGAAGGTGGGCAACAT 60.034 55.000 0.00 0.00 39.74 2.71
150 151 1.098050 GCTAGAAGGTGGGCAACATG 58.902 55.000 0.00 0.00 39.74 3.21
151 152 1.340017 GCTAGAAGGTGGGCAACATGA 60.340 52.381 0.00 0.00 39.74 3.07
152 153 2.636830 CTAGAAGGTGGGCAACATGAG 58.363 52.381 0.00 0.00 39.74 2.90
153 154 0.610232 AGAAGGTGGGCAACATGAGC 60.610 55.000 0.00 2.62 39.74 4.26
166 167 6.484818 GCAACATGAGCCATTTATTTTTGT 57.515 33.333 0.00 0.00 0.00 2.83
167 168 7.593875 GCAACATGAGCCATTTATTTTTGTA 57.406 32.000 0.00 0.00 0.00 2.41
168 169 7.678226 GCAACATGAGCCATTTATTTTTGTAG 58.322 34.615 0.00 0.00 0.00 2.74
169 170 7.331687 GCAACATGAGCCATTTATTTTTGTAGT 59.668 33.333 0.00 0.00 0.00 2.73
170 171 9.206870 CAACATGAGCCATTTATTTTTGTAGTT 57.793 29.630 0.00 0.00 0.00 2.24
171 172 8.761575 ACATGAGCCATTTATTTTTGTAGTTG 57.238 30.769 0.00 0.00 0.00 3.16
172 173 8.367156 ACATGAGCCATTTATTTTTGTAGTTGT 58.633 29.630 0.00 0.00 0.00 3.32
173 174 8.649841 CATGAGCCATTTATTTTTGTAGTTGTG 58.350 33.333 0.00 0.00 0.00 3.33
174 175 7.151308 TGAGCCATTTATTTTTGTAGTTGTGG 58.849 34.615 0.00 0.00 0.00 4.17
175 176 7.061566 AGCCATTTATTTTTGTAGTTGTGGT 57.938 32.000 0.00 0.00 0.00 4.16
176 177 6.928492 AGCCATTTATTTTTGTAGTTGTGGTG 59.072 34.615 0.00 0.00 0.00 4.17
177 178 6.704050 GCCATTTATTTTTGTAGTTGTGGTGT 59.296 34.615 0.00 0.00 0.00 4.16
178 179 7.307101 GCCATTTATTTTTGTAGTTGTGGTGTG 60.307 37.037 0.00 0.00 0.00 3.82
179 180 7.170658 CCATTTATTTTTGTAGTTGTGGTGTGG 59.829 37.037 0.00 0.00 0.00 4.17
180 181 7.406031 TTTATTTTTGTAGTTGTGGTGTGGA 57.594 32.000 0.00 0.00 0.00 4.02
181 182 7.589958 TTATTTTTGTAGTTGTGGTGTGGAT 57.410 32.000 0.00 0.00 0.00 3.41
182 183 8.693120 TTATTTTTGTAGTTGTGGTGTGGATA 57.307 30.769 0.00 0.00 0.00 2.59
183 184 7.589958 ATTTTTGTAGTTGTGGTGTGGATAA 57.410 32.000 0.00 0.00 0.00 1.75
184 185 7.589958 TTTTTGTAGTTGTGGTGTGGATAAT 57.410 32.000 0.00 0.00 0.00 1.28
209 210 4.062991 GCTCTAGGGAGTTCGTTTCAAAA 58.937 43.478 0.00 0.00 41.38 2.44
216 217 7.576861 AGGGAGTTCGTTTCAAAAGAAATTA 57.423 32.000 0.00 0.00 0.00 1.40
219 220 9.256477 GGGAGTTCGTTTCAAAAGAAATTAAAT 57.744 29.630 0.00 0.00 0.00 1.40
257 258 9.783081 AGTTCTAAAAATACGAACCCTTTTCTA 57.217 29.630 0.00 0.00 38.17 2.10
268 269 8.713737 ACGAACCCTTTTCTAGAAATACATAC 57.286 34.615 18.37 8.71 0.00 2.39
273 274 9.614792 ACCCTTTTCTAGAAATACATACACATC 57.385 33.333 18.37 0.00 0.00 3.06
274 275 9.057089 CCCTTTTCTAGAAATACATACACATCC 57.943 37.037 18.37 0.00 0.00 3.51
351 353 9.474313 AAAGGACAAATATCTTGCCTAAATACA 57.526 29.630 0.00 0.00 0.00 2.29
354 356 7.855904 GGACAAATATCTTGCCTAAATACAACG 59.144 37.037 0.00 0.00 0.00 4.10
561 572 2.856222 CTTGGCCTCCATATCCACTTC 58.144 52.381 3.32 0.00 31.53 3.01
562 573 2.196742 TGGCCTCCATATCCACTTCT 57.803 50.000 3.32 0.00 0.00 2.85
600 611 2.375146 AGAAAATCCAATACGCACCCC 58.625 47.619 0.00 0.00 0.00 4.95
615 626 1.357761 CACCCCAAGTACCCCATTTCT 59.642 52.381 0.00 0.00 0.00 2.52
616 627 2.078611 ACCCCAAGTACCCCATTTCTT 58.921 47.619 0.00 0.00 0.00 2.52
627 638 0.453390 CCATTTCTTCTGCCGCTTCC 59.547 55.000 0.00 0.00 0.00 3.46
638 649 4.697756 CGCTTCCGTCCAGCCCAA 62.698 66.667 0.00 0.00 33.29 4.12
704 2589 3.744719 CCGCACTCTCCGACCGAA 61.745 66.667 0.00 0.00 0.00 4.30
706 2591 2.126031 GCACTCTCCGACCGAACC 60.126 66.667 0.00 0.00 0.00 3.62
802 4051 0.806868 CGTAGTCTAGTGCCGGACAA 59.193 55.000 5.05 0.00 35.18 3.18
1541 4807 4.704103 TCTCTCCCTGCCCGCAGT 62.704 66.667 15.22 0.00 42.15 4.40
1551 4817 4.020617 CCCGCAGTCCTCCAGCAA 62.021 66.667 0.00 0.00 0.00 3.91
1675 4941 0.389166 CGCAGGCCGAGATATCCTTC 60.389 60.000 0.00 0.00 40.02 3.46
1679 4945 3.006967 GCAGGCCGAGATATCCTTCTTTA 59.993 47.826 0.00 0.00 0.00 1.85
1680 4946 4.561105 CAGGCCGAGATATCCTTCTTTAC 58.439 47.826 0.00 0.00 0.00 2.01
1681 4947 4.282195 CAGGCCGAGATATCCTTCTTTACT 59.718 45.833 0.00 0.00 0.00 2.24
1682 4948 4.902448 AGGCCGAGATATCCTTCTTTACTT 59.098 41.667 0.00 0.00 0.00 2.24
1683 4949 5.011227 AGGCCGAGATATCCTTCTTTACTTC 59.989 44.000 0.00 0.00 0.00 3.01
1686 4952 5.279556 CCGAGATATCCTTCTTTACTTCCCC 60.280 48.000 0.00 0.00 0.00 4.81
1688 4954 5.805135 AGATATCCTTCTTTACTTCCCCCT 58.195 41.667 0.00 0.00 0.00 4.79
1690 4956 3.579742 TCCTTCTTTACTTCCCCCTCT 57.420 47.619 0.00 0.00 0.00 3.69
1693 4959 3.783082 CCTTCTTTACTTCCCCCTCTCAT 59.217 47.826 0.00 0.00 0.00 2.90
1700 4967 6.713731 TTACTTCCCCCTCTCATTTAGTTT 57.286 37.500 0.00 0.00 0.00 2.66
1703 4970 5.313506 ACTTCCCCCTCTCATTTAGTTTCTT 59.686 40.000 0.00 0.00 0.00 2.52
1740 5007 3.360867 TGGTGTTGTGTGGATTGAGTTT 58.639 40.909 0.00 0.00 0.00 2.66
1851 5119 1.956170 CTCGCACCCGCATATCACC 60.956 63.158 0.00 0.00 38.40 4.02
1925 5193 0.322456 TCTATTGTGTGCCCACTGCC 60.322 55.000 0.00 0.00 42.34 4.85
1992 5260 3.450578 CCTGTGGTATGCATTGATTTGC 58.549 45.455 3.54 0.00 43.07 3.68
2026 5294 9.563898 CTGTGACGTGATACTACATAGTTTTTA 57.436 33.333 0.00 0.00 37.73 1.52
2075 5343 4.853924 AGTTTGTTTTGTCCTAGCCATG 57.146 40.909 0.00 0.00 0.00 3.66
2091 5359 8.522830 TCCTAGCCATGCTATTTTTAAATATGC 58.477 33.333 1.82 4.47 40.54 3.14
2139 5407 1.530720 CGCTTGCCCATTTTGGAAAAC 59.469 47.619 0.00 0.00 40.96 2.43
2152 5420 4.383850 TTGGAAAACGGATGCCAATATG 57.616 40.909 0.00 0.00 35.61 1.78
2158 5426 2.023673 ACGGATGCCAATATGTTGTGG 58.976 47.619 1.26 0.00 38.00 4.17
2193 5461 7.995488 AGCTAATCACCTATGCTTTTGTCTATT 59.005 33.333 0.00 0.00 0.00 1.73
2198 5466 5.652014 CACCTATGCTTTTGTCTATTTGGGA 59.348 40.000 0.00 0.00 0.00 4.37
2294 5562 0.331616 ACAAGGGTCCATTACTGGCC 59.668 55.000 0.00 0.00 42.80 5.36
2295 5563 0.331278 CAAGGGTCCATTACTGGCCA 59.669 55.000 4.71 4.71 42.80 5.36
2313 5581 2.550606 GCCACTAACCAATTGACGACAA 59.449 45.455 7.12 2.18 40.42 3.18
2321 5589 8.073768 ACTAACCAATTGACGACAACAAAATAG 58.926 33.333 7.12 6.31 38.90 1.73
2408 5678 3.141398 CTGCAGTGAGGCTAAACTTTGA 58.859 45.455 5.25 0.00 34.04 2.69
2472 5743 2.019984 CTAGATCCAGGCTTTGTTGGC 58.980 52.381 0.00 0.00 34.38 4.52
2526 5797 7.011576 GCTCAAAAGGTAGGAAAGCTTATACTC 59.988 40.741 0.00 0.00 45.11 2.59
2696 5967 7.502561 GCTATTGTTCCTGTTATTACCAATCCT 59.497 37.037 0.00 0.00 0.00 3.24
2806 6077 4.561735 CTTCAAACGGAAGCAAGGTTTA 57.438 40.909 0.00 0.00 45.99 2.01
2810 6081 5.908341 TCAAACGGAAGCAAGGTTTATTTT 58.092 33.333 0.00 0.00 32.96 1.82
2811 6082 5.751028 TCAAACGGAAGCAAGGTTTATTTTG 59.249 36.000 0.00 0.00 32.96 2.44
2819 6090 6.530019 AGCAAGGTTTATTTTGATACTGGG 57.470 37.500 0.00 0.00 0.00 4.45
2851 6122 8.629158 TGGTATTACAGCATTTAATTCCATGAC 58.371 33.333 0.00 0.00 33.68 3.06
2919 6192 6.986817 ACTCCATCATTGTATTCTTTCCTACG 59.013 38.462 0.00 0.00 0.00 3.51
2938 6211 3.016736 ACGGGATGGAGCATGTTTAAAG 58.983 45.455 0.00 0.00 0.00 1.85
2944 6217 1.545582 GGAGCATGTTTAAAGCTGGCA 59.454 47.619 5.26 0.00 39.02 4.92
2958 6231 1.538047 CTGGCACCTACTTTGCACAT 58.462 50.000 0.00 0.00 42.12 3.21
2963 6236 1.612950 CACCTACTTTGCACATGCCAA 59.387 47.619 0.49 0.00 41.18 4.52
2979 6252 4.159377 TGCCAATGTAAGAAAAAGAGCG 57.841 40.909 0.00 0.00 0.00 5.03
2983 6256 6.146898 GCCAATGTAAGAAAAAGAGCGTTTA 58.853 36.000 0.00 0.00 0.00 2.01
2999 6272 6.816640 AGAGCGTTTAAACTATGTTGCTATCA 59.183 34.615 16.01 0.00 0.00 2.15
3012 6285 9.806203 CTATGTTGCTATCATTTTTGGATCAAA 57.194 29.630 0.00 0.00 0.00 2.69
3047 6320 9.573133 AAACGAATGAATAAATTGAGCCTTTAG 57.427 29.630 0.00 0.00 0.00 1.85
3048 6321 8.281212 ACGAATGAATAAATTGAGCCTTTAGT 57.719 30.769 0.00 0.00 0.00 2.24
3049 6322 8.739972 ACGAATGAATAAATTGAGCCTTTAGTT 58.260 29.630 0.00 0.00 0.00 2.24
3050 6323 9.573133 CGAATGAATAAATTGAGCCTTTAGTTT 57.427 29.630 0.00 0.00 0.00 2.66
3084 6357 1.142097 GTAGAGGTTGCGGGAGAGC 59.858 63.158 0.00 0.00 37.71 4.09
3171 6444 2.457598 CCTAGGTGGCTGTCTTAGACA 58.542 52.381 14.77 14.77 44.00 3.41
3223 6496 2.644992 CCTCAAAAGTGGGCACGC 59.355 61.111 0.00 0.00 36.20 5.34
3224 6497 2.644992 CTCAAAAGTGGGCACGCC 59.355 61.111 0.00 0.00 36.20 5.68
3299 6572 8.059798 ACATAAAAAGAAGTCAAGCTATGCAT 57.940 30.769 3.79 3.79 0.00 3.96
3354 6628 4.868314 ATAGGCTAACGGAGTATTCCAC 57.132 45.455 5.00 0.00 45.00 4.02
3382 6656 4.445385 GTGGGATAAATTGATTGCAATCGC 59.555 41.667 29.23 16.30 43.71 4.58
3390 6664 6.592798 AATTGATTGCAATCGCCTATTTTG 57.407 33.333 29.23 0.00 43.71 2.44
3394 6668 2.649190 TGCAATCGCCTATTTTGCCTA 58.351 42.857 4.60 0.00 43.91 3.93
3399 6673 5.005682 GCAATCGCCTATTTTGCCTAAAAAG 59.994 40.000 0.00 0.00 41.00 2.27
3400 6674 5.914898 ATCGCCTATTTTGCCTAAAAAGT 57.085 34.783 0.00 0.00 41.00 2.66
3402 6676 6.091718 TCGCCTATTTTGCCTAAAAAGTTT 57.908 33.333 0.00 0.00 41.00 2.66
3403 6677 7.216973 TCGCCTATTTTGCCTAAAAAGTTTA 57.783 32.000 0.00 0.00 41.00 2.01
3411 6685 5.103290 TGCCTAAAAAGTTTAGTTCAGCG 57.897 39.130 6.93 0.00 0.00 5.18
3412 6686 4.023536 TGCCTAAAAAGTTTAGTTCAGCGG 60.024 41.667 6.93 0.00 0.00 5.52
3413 6687 4.615223 GCCTAAAAAGTTTAGTTCAGCGGG 60.615 45.833 6.93 0.00 0.00 6.13
3414 6688 4.517832 CCTAAAAAGTTTAGTTCAGCGGGT 59.482 41.667 6.93 0.00 0.00 5.28
3416 6690 6.205270 CCTAAAAAGTTTAGTTCAGCGGGTTA 59.795 38.462 6.93 0.00 0.00 2.85
3417 6691 6.453926 AAAAAGTTTAGTTCAGCGGGTTAA 57.546 33.333 0.00 0.00 0.00 2.01
3418 6692 5.428496 AAAGTTTAGTTCAGCGGGTTAAC 57.572 39.130 0.00 0.00 0.00 2.01
3420 6694 4.453751 AGTTTAGTTCAGCGGGTTAACAA 58.546 39.130 8.10 0.00 0.00 2.83
3421 6695 4.883006 AGTTTAGTTCAGCGGGTTAACAAA 59.117 37.500 8.10 3.47 0.00 2.83
3422 6696 5.357596 AGTTTAGTTCAGCGGGTTAACAAAA 59.642 36.000 8.10 0.00 0.00 2.44
3423 6697 3.982576 AGTTCAGCGGGTTAACAAAAG 57.017 42.857 8.10 0.00 0.00 2.27
3425 6699 2.351706 TCAGCGGGTTAACAAAAGGT 57.648 45.000 8.10 0.00 0.00 3.50
3426 6700 1.950909 TCAGCGGGTTAACAAAAGGTG 59.049 47.619 8.10 10.51 0.00 4.00
3427 6701 0.671796 AGCGGGTTAACAAAAGGTGC 59.328 50.000 8.10 0.44 0.00 5.01
3429 6703 1.000394 GCGGGTTAACAAAAGGTGCAT 60.000 47.619 8.10 0.00 0.00 3.96
3431 6705 3.056304 CGGGTTAACAAAAGGTGCATTG 58.944 45.455 8.10 0.00 0.00 2.82
3433 6707 3.807071 GGGTTAACAAAAGGTGCATTGTG 59.193 43.478 8.10 0.00 39.57 3.33
3434 6708 4.442192 GGGTTAACAAAAGGTGCATTGTGA 60.442 41.667 8.10 0.00 39.57 3.58
3435 6709 4.744631 GGTTAACAAAAGGTGCATTGTGAG 59.255 41.667 8.10 0.00 39.57 3.51
3436 6710 5.348164 GTTAACAAAAGGTGCATTGTGAGT 58.652 37.500 4.26 0.00 39.57 3.41
3437 6711 6.460399 GGTTAACAAAAGGTGCATTGTGAGTA 60.460 38.462 8.10 0.00 39.57 2.59
3438 6712 5.789643 AACAAAAGGTGCATTGTGAGTAT 57.210 34.783 4.26 0.00 39.57 2.12
3439 6713 5.789643 ACAAAAGGTGCATTGTGAGTATT 57.210 34.783 2.68 0.00 38.29 1.89
3458 6886 1.145571 TGTAGACTTTGGGCCCAGTT 58.854 50.000 26.87 13.47 0.00 3.16
3470 6898 3.294079 CCCAGTTTTTGGCAAGCAG 57.706 52.632 0.00 0.00 46.32 4.24
3471 6899 0.881600 CCCAGTTTTTGGCAAGCAGC 60.882 55.000 0.00 0.00 46.32 5.25
3472 6900 3.510920 CCCAGTTTTTGGCAAGCAGCA 62.511 52.381 0.00 0.00 46.32 4.41
3473 6901 4.763015 CCCAGTTTTTGGCAAGCAGCAT 62.763 50.000 0.00 0.00 46.32 3.79
3512 7068 8.951243 GCTGAATCTCTAAAATTCTAGTGGTTT 58.049 33.333 0.00 0.00 34.80 3.27
3568 7124 7.981789 TCAACTATTTAACAATGTGTTTTGGCA 59.018 29.630 0.00 0.00 41.45 4.92
3575 7131 6.566197 AACAATGTGTTTTGGCAAGAAAAA 57.434 29.167 0.00 0.00 37.26 1.94
3651 7207 2.037367 TCGACAGGTGGAGGGGAG 59.963 66.667 0.00 0.00 0.00 4.30
3753 7312 2.749621 AGCAGTTTAATGTGTAGCTGGC 59.250 45.455 0.00 0.00 0.00 4.85
3754 7313 2.749621 GCAGTTTAATGTGTAGCTGGCT 59.250 45.455 0.00 0.00 0.00 4.75
3778 7341 3.442273 TGGAAGCGAATATGAAACAACCC 59.558 43.478 0.00 0.00 0.00 4.11
3924 7488 3.546815 CGTTTGTGCTCAGAAGTTTCAGG 60.547 47.826 0.00 0.00 0.00 3.86
4374 7939 3.492313 GACACAAATCATTCGGCAAGAC 58.508 45.455 0.00 0.00 0.00 3.01
4375 7940 2.884012 ACACAAATCATTCGGCAAGACA 59.116 40.909 0.00 0.00 0.00 3.41
4376 7941 3.507233 ACACAAATCATTCGGCAAGACAT 59.493 39.130 0.00 0.00 0.00 3.06
4427 7995 1.106944 AACCGGAAAACAGTGCTGGG 61.107 55.000 9.46 0.00 32.25 4.45
4919 8573 0.318107 CCAAGCAGGCTTTGTTGTCG 60.318 55.000 3.30 0.00 33.42 4.35
4923 8577 1.602377 AGCAGGCTTTGTTGTCGTTAC 59.398 47.619 0.00 0.00 0.00 2.50
4971 8636 6.808704 GGAGGTGTAATGAGATTTTTCAAAGC 59.191 38.462 0.00 0.00 0.00 3.51
5657 9434 2.507407 ACAGGTGACGGGCAAATATT 57.493 45.000 0.00 0.00 0.00 1.28
5695 9472 4.832248 TCCTTAGTGTTGTCCTAAGCATG 58.168 43.478 0.00 0.00 39.92 4.06
5810 9587 4.400251 TGTCTTTCATCATTCTTCATGCCC 59.600 41.667 0.00 0.00 32.13 5.36
5820 9597 1.971505 CTTCATGCCCTGCGGACCTA 61.972 60.000 0.00 0.00 0.00 3.08
5974 9751 2.316792 CTGGACACTACGTTGAGTTCG 58.683 52.381 3.44 0.00 0.00 3.95
5989 9766 4.672409 TGAGTTCGTACTGTGATATGCAG 58.328 43.478 0.00 3.15 39.67 4.41
6031 9808 5.507985 GGAACAATCAGCATATAACCAAGCC 60.508 44.000 0.00 0.00 0.00 4.35
6123 9901 5.220135 CGTAAAGGTTGCACTTGTTTTGTTC 60.220 40.000 0.00 0.00 0.00 3.18
6182 9960 5.093677 TCTATGCACCATACCTCCACATAT 58.906 41.667 0.00 0.00 0.00 1.78
6220 9998 3.550437 ACTGATGGAATACTGGTGAGC 57.450 47.619 0.00 0.00 0.00 4.26
6305 10083 2.600792 GCTGCTAACATATCGTGCTTGC 60.601 50.000 0.00 0.00 0.00 4.01
6405 10183 3.932545 TTTCATTGTATGGCGCTGTTT 57.067 38.095 7.64 0.00 0.00 2.83
6659 10437 1.153449 CGGACCTTGCTCGCCATTA 60.153 57.895 0.00 0.00 0.00 1.90
6684 10462 5.167121 GTCATGATGGATAGTCCGATTCTG 58.833 45.833 0.00 0.00 40.17 3.02
6726 10504 0.105709 AACCCCAAACCTGTCCCTTG 60.106 55.000 0.00 0.00 0.00 3.61
6898 10676 5.010617 TGAGCTTGTAATGTGTACTCACTGA 59.989 40.000 0.00 0.00 44.14 3.41
6912 10690 2.276120 CTGACGCGACGAGTCTCG 60.276 66.667 27.81 20.57 46.93 4.04
6987 10766 2.087646 GGCAGGCTTTCTAGTTGGAAG 58.912 52.381 0.00 0.00 0.00 3.46
7026 10805 2.226330 TGTTGTCGAAATGTTCAGGGG 58.774 47.619 0.00 0.00 0.00 4.79
7104 10883 2.058595 AAGGACGATGGGACTCGGG 61.059 63.158 0.00 0.00 42.88 5.14
7160 10984 0.737715 GTCCCACTCTAACTGCTGCG 60.738 60.000 0.00 0.00 0.00 5.18
7168 10992 1.946768 TCTAACTGCTGCGCTGTTTTT 59.053 42.857 22.66 8.53 45.64 1.94
7273 11097 4.760047 ATGTGCAGTCCCGCGTCC 62.760 66.667 4.92 0.00 33.35 4.79
7308 11132 2.069273 GACCTCGACACATGACCAAAG 58.931 52.381 0.00 0.00 0.00 2.77
7369 11193 0.316032 GGATCGTCGCGTCTCTGTAC 60.316 60.000 5.77 0.00 0.00 2.90
7370 11194 0.651042 GATCGTCGCGTCTCTGTACG 60.651 60.000 5.77 6.99 45.58 3.67
7375 11199 0.441533 TCGCGTCTCTGTACGAGTTC 59.558 55.000 5.77 7.88 45.68 3.01
7431 11264 4.789075 CGTACACGCCACCCTCCG 62.789 72.222 0.00 0.00 0.00 4.63
7432 11265 3.688159 GTACACGCCACCCTCCGT 61.688 66.667 0.00 0.00 38.35 4.69
7433 11266 3.376078 TACACGCCACCCTCCGTC 61.376 66.667 0.00 0.00 35.17 4.79
7441 11274 4.296729 ACCCTCCGTCCGGTGACT 62.297 66.667 0.00 0.00 39.47 3.41
7442 11275 3.450115 CCCTCCGTCCGGTGACTC 61.450 72.222 0.00 0.00 39.47 3.36
7443 11276 2.361357 CCTCCGTCCGGTGACTCT 60.361 66.667 0.00 0.00 39.47 3.24
7444 11277 2.408241 CCTCCGTCCGGTGACTCTC 61.408 68.421 0.00 0.00 39.47 3.20
7445 11278 1.377463 CTCCGTCCGGTGACTCTCT 60.377 63.158 0.00 0.00 39.47 3.10
7446 11279 0.107800 CTCCGTCCGGTGACTCTCTA 60.108 60.000 0.00 0.00 39.47 2.43
7447 11280 0.107800 TCCGTCCGGTGACTCTCTAG 60.108 60.000 0.00 0.00 39.47 2.43
7448 11281 1.096386 CCGTCCGGTGACTCTCTAGG 61.096 65.000 0.00 0.00 39.47 3.02
7449 11282 1.716826 CGTCCGGTGACTCTCTAGGC 61.717 65.000 0.00 0.00 39.47 3.93
7452 11285 1.076632 CGGTGACTCTCTAGGCCCT 60.077 63.158 0.00 0.00 0.00 5.19
7489 11322 2.111878 AGCAAACGCTCAGGCTGT 59.888 55.556 15.27 0.00 33.18 4.40
7494 11327 0.969894 AAACGCTCAGGCTGTACTCT 59.030 50.000 15.27 0.00 36.09 3.24
7557 11394 3.638484 CGTCCTTGTTTGAATTGAACCC 58.362 45.455 0.00 0.00 0.00 4.11
7558 11395 3.638484 GTCCTTGTTTGAATTGAACCCG 58.362 45.455 0.00 0.00 0.00 5.28
7601 11446 3.062466 GAAACGGAAGGGCCTGGC 61.062 66.667 6.92 11.05 0.00 4.85
7634 11479 5.723492 TGCTTGAATATGAACGAGTGATG 57.277 39.130 0.00 0.00 0.00 3.07
7635 11480 4.571984 TGCTTGAATATGAACGAGTGATGG 59.428 41.667 0.00 0.00 0.00 3.51
7636 11481 4.572389 GCTTGAATATGAACGAGTGATGGT 59.428 41.667 0.00 0.00 0.00 3.55
7637 11482 5.753438 GCTTGAATATGAACGAGTGATGGTA 59.247 40.000 0.00 0.00 0.00 3.25
7638 11483 6.074088 GCTTGAATATGAACGAGTGATGGTAG 60.074 42.308 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.679640 CGCCATGGTGCCTAAAGGAA 60.680 55.000 13.39 0.00 37.39 3.36
1 2 1.077787 CGCCATGGTGCCTAAAGGA 60.078 57.895 13.39 0.00 37.39 3.36
2 3 2.120909 CCGCCATGGTGCCTAAAGG 61.121 63.158 20.39 0.13 38.53 3.11
3 4 1.077787 TCCGCCATGGTGCCTAAAG 60.078 57.895 20.39 5.21 39.52 1.85
4 5 1.077787 CTCCGCCATGGTGCCTAAA 60.078 57.895 20.39 1.50 39.52 1.85
5 6 2.589540 CTCCGCCATGGTGCCTAA 59.410 61.111 20.39 3.95 39.52 2.69
9 10 3.120086 ATACCCTCCGCCATGGTGC 62.120 63.158 20.39 1.35 39.52 5.01
10 11 1.227943 CATACCCTCCGCCATGGTG 60.228 63.158 18.88 18.88 39.52 4.17
11 12 1.279025 AACATACCCTCCGCCATGGT 61.279 55.000 14.67 0.00 39.52 3.55
12 13 0.819259 CAACATACCCTCCGCCATGG 60.819 60.000 7.63 7.63 40.09 3.66
13 14 0.180171 TCAACATACCCTCCGCCATG 59.820 55.000 0.00 0.00 0.00 3.66
14 15 1.072331 GATCAACATACCCTCCGCCAT 59.928 52.381 0.00 0.00 0.00 4.40
15 16 0.468226 GATCAACATACCCTCCGCCA 59.532 55.000 0.00 0.00 0.00 5.69
16 17 0.759346 AGATCAACATACCCTCCGCC 59.241 55.000 0.00 0.00 0.00 6.13
17 18 2.158957 TCAAGATCAACATACCCTCCGC 60.159 50.000 0.00 0.00 0.00 5.54
18 19 3.819564 TCAAGATCAACATACCCTCCG 57.180 47.619 0.00 0.00 0.00 4.63
19 20 5.998363 GGTAATCAAGATCAACATACCCTCC 59.002 44.000 0.00 0.00 0.00 4.30
20 21 5.998363 GGGTAATCAAGATCAACATACCCTC 59.002 44.000 18.89 2.82 44.87 4.30
21 22 5.941788 GGGTAATCAAGATCAACATACCCT 58.058 41.667 18.89 0.00 44.87 4.34
23 24 6.591935 TCAGGGTAATCAAGATCAACATACC 58.408 40.000 0.00 1.11 0.00 2.73
24 25 7.770897 ACTTCAGGGTAATCAAGATCAACATAC 59.229 37.037 0.00 0.00 0.00 2.39
25 26 7.861629 ACTTCAGGGTAATCAAGATCAACATA 58.138 34.615 0.00 0.00 0.00 2.29
26 27 6.725364 ACTTCAGGGTAATCAAGATCAACAT 58.275 36.000 0.00 0.00 0.00 2.71
27 28 6.126863 ACTTCAGGGTAATCAAGATCAACA 57.873 37.500 0.00 0.00 0.00 3.33
28 29 6.173339 TGACTTCAGGGTAATCAAGATCAAC 58.827 40.000 0.00 0.00 0.00 3.18
29 30 6.373005 TGACTTCAGGGTAATCAAGATCAA 57.627 37.500 0.00 0.00 0.00 2.57
30 31 6.156775 TCATGACTTCAGGGTAATCAAGATCA 59.843 38.462 0.00 0.00 0.00 2.92
31 32 6.586344 TCATGACTTCAGGGTAATCAAGATC 58.414 40.000 0.00 0.00 0.00 2.75
32 33 6.566079 TCATGACTTCAGGGTAATCAAGAT 57.434 37.500 0.00 0.00 0.00 2.40
33 34 6.566079 ATCATGACTTCAGGGTAATCAAGA 57.434 37.500 0.00 0.00 0.00 3.02
34 35 5.464722 CGATCATGACTTCAGGGTAATCAAG 59.535 44.000 0.00 0.00 0.00 3.02
35 36 5.359756 CGATCATGACTTCAGGGTAATCAA 58.640 41.667 0.00 0.00 0.00 2.57
36 37 4.202253 CCGATCATGACTTCAGGGTAATCA 60.202 45.833 0.00 0.00 0.00 2.57
37 38 4.310769 CCGATCATGACTTCAGGGTAATC 58.689 47.826 0.00 0.00 0.00 1.75
38 39 3.071602 CCCGATCATGACTTCAGGGTAAT 59.928 47.826 0.00 0.00 33.00 1.89
39 40 2.434336 CCCGATCATGACTTCAGGGTAA 59.566 50.000 0.00 0.00 33.00 2.85
40 41 2.039418 CCCGATCATGACTTCAGGGTA 58.961 52.381 0.00 0.00 33.00 3.69
41 42 0.833287 CCCGATCATGACTTCAGGGT 59.167 55.000 0.00 0.00 33.00 4.34
42 43 0.533755 GCCCGATCATGACTTCAGGG 60.534 60.000 15.96 15.96 40.27 4.45
43 44 0.467384 AGCCCGATCATGACTTCAGG 59.533 55.000 0.00 0.00 0.00 3.86
44 45 2.322355 AAGCCCGATCATGACTTCAG 57.678 50.000 0.00 0.00 0.00 3.02
45 46 2.787473 AAAGCCCGATCATGACTTCA 57.213 45.000 0.00 0.00 0.00 3.02
46 47 4.380531 TCATAAAGCCCGATCATGACTTC 58.619 43.478 0.00 0.00 0.00 3.01
47 48 4.101585 TCTCATAAAGCCCGATCATGACTT 59.898 41.667 0.00 0.00 0.00 3.01
48 49 3.643320 TCTCATAAAGCCCGATCATGACT 59.357 43.478 0.00 0.00 0.00 3.41
49 50 3.995199 TCTCATAAAGCCCGATCATGAC 58.005 45.455 0.00 0.00 0.00 3.06
50 51 4.040829 ACATCTCATAAAGCCCGATCATGA 59.959 41.667 0.00 0.00 0.00 3.07
51 52 4.321718 ACATCTCATAAAGCCCGATCATG 58.678 43.478 0.00 0.00 0.00 3.07
52 53 4.285517 AGACATCTCATAAAGCCCGATCAT 59.714 41.667 0.00 0.00 0.00 2.45
53 54 3.643320 AGACATCTCATAAAGCCCGATCA 59.357 43.478 0.00 0.00 0.00 2.92
54 55 4.264460 AGACATCTCATAAAGCCCGATC 57.736 45.455 0.00 0.00 0.00 3.69
55 56 4.835615 AGTAGACATCTCATAAAGCCCGAT 59.164 41.667 0.00 0.00 0.00 4.18
56 57 4.215908 AGTAGACATCTCATAAAGCCCGA 58.784 43.478 0.00 0.00 0.00 5.14
57 58 4.592485 AGTAGACATCTCATAAAGCCCG 57.408 45.455 0.00 0.00 0.00 6.13
58 59 7.501844 ACTAAAGTAGACATCTCATAAAGCCC 58.498 38.462 0.00 0.00 0.00 5.19
59 60 8.821894 CAACTAAAGTAGACATCTCATAAAGCC 58.178 37.037 0.00 0.00 0.00 4.35
60 61 9.372369 ACAACTAAAGTAGACATCTCATAAAGC 57.628 33.333 0.00 0.00 0.00 3.51
63 64 9.856488 GTCACAACTAAAGTAGACATCTCATAA 57.144 33.333 0.00 0.00 0.00 1.90
64 65 9.244292 AGTCACAACTAAAGTAGACATCTCATA 57.756 33.333 10.79 0.00 32.59 2.15
65 66 8.128322 AGTCACAACTAAAGTAGACATCTCAT 57.872 34.615 10.79 0.00 32.59 2.90
66 67 7.526142 AGTCACAACTAAAGTAGACATCTCA 57.474 36.000 10.79 0.00 32.59 3.27
67 68 7.329717 CCAAGTCACAACTAAAGTAGACATCTC 59.670 40.741 10.79 0.00 33.48 2.75
68 69 7.155328 CCAAGTCACAACTAAAGTAGACATCT 58.845 38.462 10.79 0.00 33.48 2.90
69 70 6.128526 GCCAAGTCACAACTAAAGTAGACATC 60.129 42.308 10.79 0.00 33.48 3.06
70 71 5.701290 GCCAAGTCACAACTAAAGTAGACAT 59.299 40.000 10.79 0.24 33.48 3.06
71 72 5.054477 GCCAAGTCACAACTAAAGTAGACA 58.946 41.667 10.79 0.00 33.48 3.41
72 73 5.298347 AGCCAAGTCACAACTAAAGTAGAC 58.702 41.667 0.00 0.00 33.48 2.59
73 74 5.546621 AGCCAAGTCACAACTAAAGTAGA 57.453 39.130 0.00 0.00 33.48 2.59
74 75 6.260050 TCAAAGCCAAGTCACAACTAAAGTAG 59.740 38.462 0.00 0.00 33.48 2.57
75 76 6.116806 TCAAAGCCAAGTCACAACTAAAGTA 58.883 36.000 0.00 0.00 33.48 2.24
76 77 4.947388 TCAAAGCCAAGTCACAACTAAAGT 59.053 37.500 0.00 0.00 33.48 2.66
77 78 5.499139 TCAAAGCCAAGTCACAACTAAAG 57.501 39.130 0.00 0.00 33.48 1.85
78 79 6.016610 GGTATCAAAGCCAAGTCACAACTAAA 60.017 38.462 0.00 0.00 33.48 1.85
79 80 5.472137 GGTATCAAAGCCAAGTCACAACTAA 59.528 40.000 0.00 0.00 33.48 2.24
80 81 5.001232 GGTATCAAAGCCAAGTCACAACTA 58.999 41.667 0.00 0.00 33.48 2.24
81 82 3.821033 GGTATCAAAGCCAAGTCACAACT 59.179 43.478 0.00 0.00 37.32 3.16
82 83 3.057526 GGGTATCAAAGCCAAGTCACAAC 60.058 47.826 0.00 0.00 45.71 3.32
83 84 3.153919 GGGTATCAAAGCCAAGTCACAA 58.846 45.455 0.00 0.00 45.71 3.33
84 85 2.790433 GGGTATCAAAGCCAAGTCACA 58.210 47.619 0.00 0.00 45.71 3.58
92 93 3.497262 GCGTAACATAGGGTATCAAAGCC 59.503 47.826 0.00 0.00 46.88 4.35
93 94 3.497262 GGCGTAACATAGGGTATCAAAGC 59.503 47.826 0.00 0.00 0.00 3.51
94 95 4.957296 AGGCGTAACATAGGGTATCAAAG 58.043 43.478 0.00 0.00 0.00 2.77
95 96 5.129815 AGAAGGCGTAACATAGGGTATCAAA 59.870 40.000 0.00 0.00 0.00 2.69
96 97 4.652421 AGAAGGCGTAACATAGGGTATCAA 59.348 41.667 0.00 0.00 0.00 2.57
97 98 4.220724 AGAAGGCGTAACATAGGGTATCA 58.779 43.478 0.00 0.00 0.00 2.15
98 99 4.615452 CGAGAAGGCGTAACATAGGGTATC 60.615 50.000 0.00 0.00 0.00 2.24
99 100 3.255149 CGAGAAGGCGTAACATAGGGTAT 59.745 47.826 0.00 0.00 0.00 2.73
100 101 2.620115 CGAGAAGGCGTAACATAGGGTA 59.380 50.000 0.00 0.00 0.00 3.69
101 102 1.407979 CGAGAAGGCGTAACATAGGGT 59.592 52.381 0.00 0.00 0.00 4.34
102 103 1.868519 GCGAGAAGGCGTAACATAGGG 60.869 57.143 0.00 0.00 0.00 3.53
103 104 1.202371 TGCGAGAAGGCGTAACATAGG 60.202 52.381 0.00 0.00 35.06 2.57
104 105 2.203800 TGCGAGAAGGCGTAACATAG 57.796 50.000 0.00 0.00 35.06 2.23
105 106 2.658373 TTGCGAGAAGGCGTAACATA 57.342 45.000 0.00 0.00 35.06 2.29
106 107 2.024176 ATTGCGAGAAGGCGTAACAT 57.976 45.000 0.00 0.00 38.60 2.71
107 108 1.730064 GAATTGCGAGAAGGCGTAACA 59.270 47.619 0.00 0.00 38.60 2.41
108 109 1.730064 TGAATTGCGAGAAGGCGTAAC 59.270 47.619 0.00 0.00 38.60 2.50
109 110 2.087501 TGAATTGCGAGAAGGCGTAA 57.912 45.000 0.00 0.00 39.97 3.18
110 111 1.933181 CATGAATTGCGAGAAGGCGTA 59.067 47.619 0.00 0.00 35.06 4.42
111 112 0.729116 CATGAATTGCGAGAAGGCGT 59.271 50.000 0.00 0.00 35.06 5.68
112 113 0.028505 CCATGAATTGCGAGAAGGCG 59.971 55.000 0.00 0.00 35.06 5.52
113 114 0.248784 GCCATGAATTGCGAGAAGGC 60.249 55.000 0.00 0.00 0.00 4.35
114 115 1.386533 AGCCATGAATTGCGAGAAGG 58.613 50.000 0.00 0.00 0.00 3.46
115 116 3.461061 TCTAGCCATGAATTGCGAGAAG 58.539 45.455 0.00 0.00 36.50 2.85
116 117 3.541996 TCTAGCCATGAATTGCGAGAA 57.458 42.857 0.00 0.00 36.50 2.87
117 118 3.461061 CTTCTAGCCATGAATTGCGAGA 58.539 45.455 0.00 0.00 37.44 4.04
118 119 2.547211 CCTTCTAGCCATGAATTGCGAG 59.453 50.000 0.00 0.00 0.00 5.03
119 120 2.092968 ACCTTCTAGCCATGAATTGCGA 60.093 45.455 0.00 0.00 0.00 5.10
120 121 2.032550 CACCTTCTAGCCATGAATTGCG 59.967 50.000 0.00 0.00 0.00 4.85
121 122 2.360165 CCACCTTCTAGCCATGAATTGC 59.640 50.000 0.00 0.00 0.00 3.56
122 123 2.954318 CCCACCTTCTAGCCATGAATTG 59.046 50.000 0.00 0.00 0.00 2.32
123 124 2.687914 GCCCACCTTCTAGCCATGAATT 60.688 50.000 0.00 0.00 0.00 2.17
124 125 1.133668 GCCCACCTTCTAGCCATGAAT 60.134 52.381 0.00 0.00 0.00 2.57
125 126 0.255890 GCCCACCTTCTAGCCATGAA 59.744 55.000 0.00 0.00 0.00 2.57
126 127 0.913934 TGCCCACCTTCTAGCCATGA 60.914 55.000 0.00 0.00 0.00 3.07
127 128 0.034186 TTGCCCACCTTCTAGCCATG 60.034 55.000 0.00 0.00 0.00 3.66
128 129 0.034089 GTTGCCCACCTTCTAGCCAT 60.034 55.000 0.00 0.00 0.00 4.40
129 130 1.378762 GTTGCCCACCTTCTAGCCA 59.621 57.895 0.00 0.00 0.00 4.75
130 131 0.034089 ATGTTGCCCACCTTCTAGCC 60.034 55.000 0.00 0.00 0.00 3.93
131 132 1.098050 CATGTTGCCCACCTTCTAGC 58.902 55.000 0.00 0.00 0.00 3.42
132 133 2.636830 CTCATGTTGCCCACCTTCTAG 58.363 52.381 0.00 0.00 0.00 2.43
133 134 1.340017 GCTCATGTTGCCCACCTTCTA 60.340 52.381 0.00 0.00 0.00 2.10
134 135 0.610232 GCTCATGTTGCCCACCTTCT 60.610 55.000 0.00 0.00 0.00 2.85
135 136 1.598701 GGCTCATGTTGCCCACCTTC 61.599 60.000 17.53 0.00 44.32 3.46
136 137 1.607467 GGCTCATGTTGCCCACCTT 60.607 57.895 17.53 0.00 44.32 3.50
137 138 2.036256 GGCTCATGTTGCCCACCT 59.964 61.111 17.53 0.00 44.32 4.00
143 144 6.484818 ACAAAAATAAATGGCTCATGTTGC 57.515 33.333 0.00 0.00 0.00 4.17
144 145 8.761575 ACTACAAAAATAAATGGCTCATGTTG 57.238 30.769 0.00 0.00 0.00 3.33
145 146 9.206870 CAACTACAAAAATAAATGGCTCATGTT 57.793 29.630 0.00 0.00 0.00 2.71
146 147 8.367156 ACAACTACAAAAATAAATGGCTCATGT 58.633 29.630 0.00 0.00 0.00 3.21
147 148 8.649841 CACAACTACAAAAATAAATGGCTCATG 58.350 33.333 0.00 0.00 0.00 3.07
148 149 7.818930 CCACAACTACAAAAATAAATGGCTCAT 59.181 33.333 0.00 0.00 0.00 2.90
149 150 7.151308 CCACAACTACAAAAATAAATGGCTCA 58.849 34.615 0.00 0.00 0.00 4.26
150 151 7.116233 CACCACAACTACAAAAATAAATGGCTC 59.884 37.037 0.00 0.00 0.00 4.70
151 152 6.928492 CACCACAACTACAAAAATAAATGGCT 59.072 34.615 0.00 0.00 0.00 4.75
152 153 6.704050 ACACCACAACTACAAAAATAAATGGC 59.296 34.615 0.00 0.00 0.00 4.40
153 154 7.170658 CCACACCACAACTACAAAAATAAATGG 59.829 37.037 0.00 0.00 0.00 3.16
154 155 7.923344 TCCACACCACAACTACAAAAATAAATG 59.077 33.333 0.00 0.00 0.00 2.32
155 156 8.012957 TCCACACCACAACTACAAAAATAAAT 57.987 30.769 0.00 0.00 0.00 1.40
156 157 7.406031 TCCACACCACAACTACAAAAATAAA 57.594 32.000 0.00 0.00 0.00 1.40
157 158 7.589958 ATCCACACCACAACTACAAAAATAA 57.410 32.000 0.00 0.00 0.00 1.40
158 159 8.693120 TTATCCACACCACAACTACAAAAATA 57.307 30.769 0.00 0.00 0.00 1.40
159 160 7.589958 TTATCCACACCACAACTACAAAAAT 57.410 32.000 0.00 0.00 0.00 1.82
160 161 7.285629 TCATTATCCACACCACAACTACAAAAA 59.714 33.333 0.00 0.00 0.00 1.94
161 162 6.773200 TCATTATCCACACCACAACTACAAAA 59.227 34.615 0.00 0.00 0.00 2.44
162 163 6.299922 TCATTATCCACACCACAACTACAAA 58.700 36.000 0.00 0.00 0.00 2.83
163 164 5.870706 TCATTATCCACACCACAACTACAA 58.129 37.500 0.00 0.00 0.00 2.41
164 165 5.487433 CTCATTATCCACACCACAACTACA 58.513 41.667 0.00 0.00 0.00 2.74
165 166 4.332819 GCTCATTATCCACACCACAACTAC 59.667 45.833 0.00 0.00 0.00 2.73
166 167 4.225042 AGCTCATTATCCACACCACAACTA 59.775 41.667 0.00 0.00 0.00 2.24
167 168 3.009473 AGCTCATTATCCACACCACAACT 59.991 43.478 0.00 0.00 0.00 3.16
168 169 3.347216 AGCTCATTATCCACACCACAAC 58.653 45.455 0.00 0.00 0.00 3.32
169 170 3.264193 AGAGCTCATTATCCACACCACAA 59.736 43.478 17.77 0.00 0.00 3.33
170 171 2.840038 AGAGCTCATTATCCACACCACA 59.160 45.455 17.77 0.00 0.00 4.17
171 172 3.550437 AGAGCTCATTATCCACACCAC 57.450 47.619 17.77 0.00 0.00 4.16
172 173 3.643320 CCTAGAGCTCATTATCCACACCA 59.357 47.826 17.77 0.00 0.00 4.17
173 174 3.007398 CCCTAGAGCTCATTATCCACACC 59.993 52.174 17.77 0.00 0.00 4.16
174 175 3.898123 TCCCTAGAGCTCATTATCCACAC 59.102 47.826 17.77 0.00 0.00 3.82
175 176 4.155709 CTCCCTAGAGCTCATTATCCACA 58.844 47.826 17.77 0.00 32.13 4.17
176 177 4.156477 ACTCCCTAGAGCTCATTATCCAC 58.844 47.826 17.77 0.00 44.65 4.02
177 178 4.477536 ACTCCCTAGAGCTCATTATCCA 57.522 45.455 17.77 0.00 44.65 3.41
178 179 4.082463 CGAACTCCCTAGAGCTCATTATCC 60.082 50.000 17.77 0.00 44.65 2.59
179 180 4.521256 ACGAACTCCCTAGAGCTCATTATC 59.479 45.833 17.77 2.28 44.65 1.75
180 181 4.475345 ACGAACTCCCTAGAGCTCATTAT 58.525 43.478 17.77 0.00 44.65 1.28
181 182 3.899726 ACGAACTCCCTAGAGCTCATTA 58.100 45.455 17.77 0.00 44.65 1.90
182 183 2.741145 ACGAACTCCCTAGAGCTCATT 58.259 47.619 17.77 0.00 44.65 2.57
183 184 2.445682 ACGAACTCCCTAGAGCTCAT 57.554 50.000 17.77 3.63 44.65 2.90
184 185 2.217510 AACGAACTCCCTAGAGCTCA 57.782 50.000 17.77 0.82 44.65 4.26
244 245 8.601476 GTGTATGTATTTCTAGAAAAGGGTTCG 58.399 37.037 21.26 0.00 33.56 3.95
245 246 9.444600 TGTGTATGTATTTCTAGAAAAGGGTTC 57.555 33.333 21.26 11.47 33.56 3.62
248 249 9.057089 GGATGTGTATGTATTTCTAGAAAAGGG 57.943 37.037 21.26 0.00 33.56 3.95
308 309 5.482526 TGTCCTTTTGTGTAGCCTACATAGA 59.517 40.000 8.00 0.00 41.34 1.98
314 315 7.630082 AGATATTTGTCCTTTTGTGTAGCCTA 58.370 34.615 0.00 0.00 0.00 3.93
520 531 2.336667 CGCCACAAAGCCCTTTAAATG 58.663 47.619 0.00 0.00 0.00 2.32
521 532 1.337728 GCGCCACAAAGCCCTTTAAAT 60.338 47.619 0.00 0.00 0.00 1.40
522 533 0.032815 GCGCCACAAAGCCCTTTAAA 59.967 50.000 0.00 0.00 0.00 1.52
523 534 0.825840 AGCGCCACAAAGCCCTTTAA 60.826 50.000 2.29 0.00 0.00 1.52
543 554 2.050144 GAGAAGTGGATATGGAGGCCA 58.950 52.381 5.01 0.00 38.19 5.36
578 589 3.194755 GGGGTGCGTATTGGATTTTCTTT 59.805 43.478 0.00 0.00 0.00 2.52
594 605 0.252057 AAATGGGGTACTTGGGGTGC 60.252 55.000 0.00 0.00 0.00 5.01
600 611 2.755103 GGCAGAAGAAATGGGGTACTTG 59.245 50.000 0.00 0.00 0.00 3.16
615 626 3.589654 CTGGACGGAAGCGGCAGAA 62.590 63.158 1.45 0.00 0.00 3.02
616 627 4.069232 CTGGACGGAAGCGGCAGA 62.069 66.667 1.45 0.00 0.00 4.26
627 638 2.178912 TAGTCTTTTTGGGCTGGACG 57.821 50.000 0.00 0.00 32.86 4.79
638 649 2.621668 GGGCTGGGCTTGATAGTCTTTT 60.622 50.000 0.00 0.00 0.00 2.27
819 4068 2.355837 GTGTGCTTCGCTGACGGA 60.356 61.111 0.00 0.00 40.63 4.69
1488 4754 2.202932 CAGACATTCGCGAGGGGG 60.203 66.667 9.59 2.73 0.00 5.40
1675 4941 6.314899 ACTAAATGAGAGGGGGAAGTAAAG 57.685 41.667 0.00 0.00 0.00 1.85
1679 4945 4.852697 AGAAACTAAATGAGAGGGGGAAGT 59.147 41.667 0.00 0.00 0.00 3.01
1680 4946 5.443230 AGAAACTAAATGAGAGGGGGAAG 57.557 43.478 0.00 0.00 0.00 3.46
1681 4947 5.860648 AAGAAACTAAATGAGAGGGGGAA 57.139 39.130 0.00 0.00 0.00 3.97
1682 4948 6.030082 ACTAAGAAACTAAATGAGAGGGGGA 58.970 40.000 0.00 0.00 0.00 4.81
1683 4949 6.314899 ACTAAGAAACTAAATGAGAGGGGG 57.685 41.667 0.00 0.00 0.00 5.40
1710 4977 5.298989 TCCACACAACACCAAATAGTACT 57.701 39.130 0.00 0.00 0.00 2.73
1712 4979 6.299922 TCAATCCACACAACACCAAATAGTA 58.700 36.000 0.00 0.00 0.00 1.82
1713 4980 5.136828 TCAATCCACACAACACCAAATAGT 58.863 37.500 0.00 0.00 0.00 2.12
1714 4981 5.241506 ACTCAATCCACACAACACCAAATAG 59.758 40.000 0.00 0.00 0.00 1.73
1716 4983 3.960102 ACTCAATCCACACAACACCAAAT 59.040 39.130 0.00 0.00 0.00 2.32
1721 4988 5.065988 ACTGTAAACTCAATCCACACAACAC 59.934 40.000 0.00 0.00 0.00 3.32
1724 4991 5.995282 CCTACTGTAAACTCAATCCACACAA 59.005 40.000 0.00 0.00 0.00 3.33
1740 5007 3.261962 ACATCCCCAAAACCCTACTGTA 58.738 45.455 0.00 0.00 0.00 2.74
1851 5119 0.179073 CTACATGGGAAGGCAGGACG 60.179 60.000 0.00 0.00 0.00 4.79
1925 5193 2.086869 CATAGTGAAACACAGCCCTGG 58.913 52.381 4.75 0.00 41.43 4.45
2026 5294 7.387397 GCTAGTAAATTCTCAAGCTGCATAGAT 59.613 37.037 1.02 0.00 0.00 1.98
2036 5304 9.736023 AAACAAACTTGCTAGTAAATTCTCAAG 57.264 29.630 0.00 0.00 37.51 3.02
2075 5343 8.940768 TGAAGGGTTGCATATTTAAAAATAGC 57.059 30.769 0.00 5.91 34.62 2.97
2091 5359 6.040842 CACTAATGGGGATAATTGAAGGGTTG 59.959 42.308 0.00 0.00 0.00 3.77
2139 5407 1.337703 CCCACAACATATTGGCATCCG 59.662 52.381 0.00 0.00 40.42 4.18
2152 5420 3.668386 GCTACCACAGCCCACAAC 58.332 61.111 0.00 0.00 45.23 3.32
2178 5446 7.004086 CCCTATCCCAAATAGACAAAAGCATA 58.996 38.462 0.00 0.00 0.00 3.14
2193 5461 6.240176 GCTAAATATGGAACTCCCTATCCCAA 60.240 42.308 0.00 0.00 34.68 4.12
2198 5466 8.686739 ACATAGCTAAATATGGAACTCCCTAT 57.313 34.615 0.00 0.00 37.45 2.57
2294 5562 4.804608 TGTTGTCGTCAATTGGTTAGTG 57.195 40.909 5.42 0.00 35.92 2.74
2295 5563 5.821516 TTTGTTGTCGTCAATTGGTTAGT 57.178 34.783 5.42 0.00 35.92 2.24
2472 5743 9.231297 TCTTCACTAAAACAGGAAAATATCAGG 57.769 33.333 0.00 0.00 0.00 3.86
2526 5797 7.159372 AGGAAGTAACCTTAATGTGTACACAG 58.841 38.462 30.65 19.98 40.01 3.66
2696 5967 5.476599 CCAAGATGGTTCAAGGTTAATGACA 59.523 40.000 0.00 0.00 31.35 3.58
2806 6077 4.479158 ACCACAACACCCAGTATCAAAAT 58.521 39.130 0.00 0.00 0.00 1.82
2810 6081 4.919774 AATACCACAACACCCAGTATCA 57.080 40.909 0.00 0.00 0.00 2.15
2811 6082 5.736813 TGTAATACCACAACACCCAGTATC 58.263 41.667 0.00 0.00 0.00 2.24
2819 6090 8.980143 AATTAAATGCTGTAATACCACAACAC 57.020 30.769 0.00 0.00 27.95 3.32
2851 6122 3.189287 CCCTCAGACAAAATGGAAAGACG 59.811 47.826 0.00 0.00 0.00 4.18
2919 6192 3.026694 AGCTTTAAACATGCTCCATCCC 58.973 45.455 0.00 0.00 29.80 3.85
2938 6211 1.172180 TGTGCAAAGTAGGTGCCAGC 61.172 55.000 0.00 0.00 41.49 4.85
2944 6217 1.993956 TTGGCATGTGCAAAGTAGGT 58.006 45.000 7.36 0.00 44.36 3.08
2958 6231 3.568007 ACGCTCTTTTTCTTACATTGGCA 59.432 39.130 0.00 0.00 0.00 4.92
2983 6256 9.807649 GATCCAAAAATGATAGCAACATAGTTT 57.192 29.630 0.00 0.00 0.00 2.66
3019 6292 9.921637 AAAGGCTCAATTTATTCATTCGTTTTA 57.078 25.926 0.00 0.00 0.00 1.52
3024 6297 9.573133 AAACTAAAGGCTCAATTTATTCATTCG 57.427 29.630 0.00 0.00 0.00 3.34
3050 6323 8.251721 GCAACCTCTACTCTAATCAAAAGACTA 58.748 37.037 0.00 0.00 0.00 2.59
3051 6324 7.100409 GCAACCTCTACTCTAATCAAAAGACT 58.900 38.462 0.00 0.00 0.00 3.24
3074 6347 1.758122 TATGCTCTGCTCTCCCGCA 60.758 57.895 0.00 0.00 38.40 5.69
3075 6348 1.300542 GTATGCTCTGCTCTCCCGC 60.301 63.158 0.00 0.00 0.00 6.13
3171 6444 4.757149 GTGAACATGTAGTCAAGCTTTCCT 59.243 41.667 0.00 0.00 0.00 3.36
3299 6572 3.563261 CCATTACTTGGGTTGGATGGTGA 60.563 47.826 0.00 0.00 42.33 4.02
3333 6607 4.220724 TGTGGAATACTCCGTTAGCCTAT 58.779 43.478 0.00 0.00 45.85 2.57
3354 6628 7.612668 TTGCAATCAATTTATCCCACATTTG 57.387 32.000 0.00 0.00 0.00 2.32
3382 6656 9.974980 TGAACTAAACTTTTTAGGCAAAATAGG 57.025 29.630 9.82 0.00 33.73 2.57
3390 6664 4.473199 CCGCTGAACTAAACTTTTTAGGC 58.527 43.478 9.82 3.61 0.00 3.93
3394 6668 4.994907 AACCCGCTGAACTAAACTTTTT 57.005 36.364 0.00 0.00 0.00 1.94
3399 6673 4.816786 TTGTTAACCCGCTGAACTAAAC 57.183 40.909 2.48 0.00 0.00 2.01
3400 6674 5.221087 CCTTTTGTTAACCCGCTGAACTAAA 60.221 40.000 2.48 0.00 0.00 1.85
3402 6676 3.816523 CCTTTTGTTAACCCGCTGAACTA 59.183 43.478 2.48 0.00 0.00 2.24
3403 6677 2.621526 CCTTTTGTTAACCCGCTGAACT 59.378 45.455 2.48 0.00 0.00 3.01
3411 6685 3.807071 CACAATGCACCTTTTGTTAACCC 59.193 43.478 2.48 0.00 33.93 4.11
3412 6686 4.688021 TCACAATGCACCTTTTGTTAACC 58.312 39.130 2.48 0.00 33.93 2.85
3413 6687 5.348164 ACTCACAATGCACCTTTTGTTAAC 58.652 37.500 0.65 0.00 33.93 2.01
3414 6688 5.590530 ACTCACAATGCACCTTTTGTTAA 57.409 34.783 0.65 0.00 33.93 2.01
3416 6690 5.789643 ATACTCACAATGCACCTTTTGTT 57.210 34.783 0.65 0.00 33.93 2.83
3417 6691 5.068987 ACAATACTCACAATGCACCTTTTGT 59.931 36.000 0.00 0.00 36.53 2.83
3418 6692 5.531634 ACAATACTCACAATGCACCTTTTG 58.468 37.500 0.00 0.00 0.00 2.44
3420 6694 6.149474 GTCTACAATACTCACAATGCACCTTT 59.851 38.462 0.00 0.00 0.00 3.11
3421 6695 5.643777 GTCTACAATACTCACAATGCACCTT 59.356 40.000 0.00 0.00 0.00 3.50
3422 6696 5.046304 AGTCTACAATACTCACAATGCACCT 60.046 40.000 0.00 0.00 0.00 4.00
3423 6697 5.178797 AGTCTACAATACTCACAATGCACC 58.821 41.667 0.00 0.00 0.00 5.01
3425 6699 6.149308 CCAAAGTCTACAATACTCACAATGCA 59.851 38.462 0.00 0.00 0.00 3.96
3426 6700 6.403636 CCCAAAGTCTACAATACTCACAATGC 60.404 42.308 0.00 0.00 0.00 3.56
3427 6701 6.403636 GCCCAAAGTCTACAATACTCACAATG 60.404 42.308 0.00 0.00 0.00 2.82
3429 6703 5.001232 GCCCAAAGTCTACAATACTCACAA 58.999 41.667 0.00 0.00 0.00 3.33
3431 6705 3.939592 GGCCCAAAGTCTACAATACTCAC 59.060 47.826 0.00 0.00 0.00 3.51
3433 6707 3.054655 TGGGCCCAAAGTCTACAATACTC 60.055 47.826 26.33 0.00 0.00 2.59
3434 6708 2.916934 TGGGCCCAAAGTCTACAATACT 59.083 45.455 26.33 0.00 0.00 2.12
3435 6709 3.279434 CTGGGCCCAAAGTCTACAATAC 58.721 50.000 28.29 0.00 0.00 1.89
3436 6710 2.916934 ACTGGGCCCAAAGTCTACAATA 59.083 45.455 28.29 0.00 0.00 1.90
3437 6711 1.710809 ACTGGGCCCAAAGTCTACAAT 59.289 47.619 28.29 0.00 0.00 2.71
3438 6712 1.145571 ACTGGGCCCAAAGTCTACAA 58.854 50.000 28.29 0.00 0.00 2.41
3439 6713 1.145571 AACTGGGCCCAAAGTCTACA 58.854 50.000 28.29 0.00 0.00 2.74
3458 6886 0.751452 TCACATGCTGCTTGCCAAAA 59.249 45.000 14.63 0.00 42.00 2.44
3580 7136 9.665719 TGAAATAGTTGTCATAGTTCATGCTTA 57.334 29.630 0.00 0.00 33.64 3.09
3585 7141 8.906867 CCCAATGAAATAGTTGTCATAGTTCAT 58.093 33.333 4.18 4.18 45.04 2.57
3630 7186 2.262915 CCTCCACCTGTCGAGCAC 59.737 66.667 0.00 0.00 0.00 4.40
3635 7191 3.775654 GCTCCCCTCCACCTGTCG 61.776 72.222 0.00 0.00 0.00 4.35
3651 7207 7.786178 TTCATATGACATGTTACTTACTGGC 57.214 36.000 4.48 0.00 0.00 4.85
3753 7312 5.572896 GGTTGTTTCATATTCGCTTCCAAAG 59.427 40.000 0.00 0.00 0.00 2.77
3754 7313 5.465935 GGTTGTTTCATATTCGCTTCCAAA 58.534 37.500 0.00 0.00 0.00 3.28
3778 7341 6.471233 TCCCTGAACATAATGTCTCTACTG 57.529 41.667 0.00 0.00 0.00 2.74
3924 7488 3.896648 TTCAAGTCGGAAAGCATCAAC 57.103 42.857 0.00 0.00 0.00 3.18
4298 7863 6.243148 TCTTCCCCAGACCTAAAAACATAAC 58.757 40.000 0.00 0.00 0.00 1.89
4427 7995 4.363991 ACCATCTTGATCAATAGAGGGC 57.636 45.455 22.25 0.00 44.14 5.19
4619 8270 7.923344 TCCGAAAATATTTTGAACTGCTGAAAA 59.077 29.630 17.98 0.00 0.00 2.29
4724 8375 0.820871 GTGACTCTAGCACCCTGAGG 59.179 60.000 0.00 0.00 40.04 3.86
4820 8471 3.363341 TGGCATTGGAAAACTCGAAAC 57.637 42.857 0.00 0.00 0.00 2.78
4904 8558 1.659211 CGTAACGACAACAAAGCCTGC 60.659 52.381 0.00 0.00 0.00 4.85
4919 8573 6.946229 AACAGTGTGATCTGATTACGTAAC 57.054 37.500 10.81 5.62 38.63 2.50
4923 8577 5.004440 CCGTTAACAGTGTGATCTGATTACG 59.996 44.000 6.39 7.93 38.63 3.18
4971 8636 1.555477 GCCAACGTGAACCAAACAAG 58.445 50.000 0.00 0.00 0.00 3.16
5015 8680 2.436646 CGGGCCGAGCAAGAACAT 60.437 61.111 24.41 0.00 0.00 2.71
5657 9434 0.106918 AGGAGGTGTTTGTTTCGGCA 60.107 50.000 0.00 0.00 0.00 5.69
5686 9463 6.821388 AGTTGTATAGGAGAACATGCTTAGG 58.179 40.000 0.00 0.00 33.71 2.69
5695 9472 7.724305 TCACAACAAAGTTGTATAGGAGAAC 57.276 36.000 14.39 0.00 41.31 3.01
5753 9530 9.392259 GGATGTTCATATCATGTGATACATCAT 57.608 33.333 24.30 16.95 40.68 2.45
5754 9531 8.599792 AGGATGTTCATATCATGTGATACATCA 58.400 33.333 24.30 14.44 40.68 3.07
5757 9534 9.880157 CATAGGATGTTCATATCATGTGATACA 57.120 33.333 4.93 2.44 39.57 2.29
5760 9537 8.823794 AGTCATAGGATGTTCATATCATGTGAT 58.176 33.333 0.68 0.68 39.77 3.06
5761 9538 8.198807 AGTCATAGGATGTTCATATCATGTGA 57.801 34.615 0.00 0.00 36.89 3.58
5762 9539 8.718734 CAAGTCATAGGATGTTCATATCATGTG 58.281 37.037 0.00 0.00 33.22 3.21
5763 9540 8.435187 ACAAGTCATAGGATGTTCATATCATGT 58.565 33.333 0.00 0.00 0.00 3.21
5764 9541 8.843885 ACAAGTCATAGGATGTTCATATCATG 57.156 34.615 0.00 0.00 0.00 3.07
5765 9542 8.878211 AGACAAGTCATAGGATGTTCATATCAT 58.122 33.333 2.72 0.00 0.00 2.45
5810 9587 0.108186 TGCACTTGATAGGTCCGCAG 60.108 55.000 0.00 0.00 0.00 5.18
5879 9656 2.238144 ACTCTGCACCACTATCAGCAAT 59.762 45.455 0.00 0.00 36.44 3.56
5974 9751 2.535984 GACACGCTGCATATCACAGTAC 59.464 50.000 0.00 0.00 37.47 2.73
5989 9766 2.218603 TCCTCTTCAAAAAGGACACGC 58.781 47.619 0.00 0.00 36.75 5.34
6031 9808 9.806203 TTGAATTACCAAATATTCTGAAGCATG 57.194 29.630 0.00 0.00 33.08 4.06
6123 9901 0.950836 TTCCCATCACTGCACAAACG 59.049 50.000 0.00 0.00 0.00 3.60
6182 9960 6.261603 CCATCAGTTTGCATAGAGAAGCATTA 59.738 38.462 0.00 0.00 40.94 1.90
6220 9998 7.566508 GCAGAAGAAGAAAAAGAAGATTTTGCG 60.567 37.037 0.00 0.00 32.85 4.85
6321 10099 1.943340 GAAGCACAGTTATAGCAGGGC 59.057 52.381 0.00 0.00 0.00 5.19
6325 10103 3.369471 GGTCCTGAAGCACAGTTATAGCA 60.369 47.826 9.43 0.00 44.40 3.49
6659 10437 5.483231 AGAATCGGACTATCCATCATGACAT 59.517 40.000 0.00 0.00 35.91 3.06
7026 10805 0.391793 ACTTAGGCAAGCGAGGCTTC 60.392 55.000 12.32 0.00 46.77 3.86
7063 10842 5.404946 TGTACGGCTGTTAACATTAGAGAC 58.595 41.667 9.13 0.00 0.00 3.36
7160 10984 2.809446 ACGAAAAGCTCCAAAAACAGC 58.191 42.857 0.00 0.00 35.73 4.40
7194 11018 4.240096 CCTTGTCATGTTGCTTCCAAATC 58.760 43.478 0.00 0.00 31.68 2.17
7273 11097 2.373269 GAGGTCGATCGTTCGTGTATG 58.627 52.381 15.94 0.00 45.65 2.39
7274 11098 1.004185 CGAGGTCGATCGTTCGTGTAT 60.004 52.381 15.94 1.39 45.65 2.29
7293 11117 0.110688 CGTGCTTTGGTCATGTGTCG 60.111 55.000 0.00 0.00 0.00 4.35
7331 11155 2.892425 GCGTGGCTTCGATGGGAG 60.892 66.667 6.82 0.00 0.00 4.30
7363 11187 1.642037 CGGCTCCGAACTCGTACAGA 61.642 60.000 1.35 0.00 42.83 3.41
7369 11193 2.504244 GACACGGCTCCGAACTCG 60.504 66.667 15.95 0.00 42.83 4.18
7370 11194 1.915614 TACGACACGGCTCCGAACTC 61.916 60.000 15.95 5.16 42.83 3.01
7397 11221 2.388232 CGGCTTCACGTACCTTGGC 61.388 63.158 0.00 0.00 0.00 4.52
7431 11264 1.385756 GGCCTAGAGAGTCACCGGAC 61.386 65.000 9.46 0.00 44.66 4.79
7432 11265 1.076923 GGCCTAGAGAGTCACCGGA 60.077 63.158 9.46 0.00 0.00 5.14
7433 11266 2.128507 GGGCCTAGAGAGTCACCGG 61.129 68.421 0.84 0.00 0.00 5.28
7434 11267 1.076632 AGGGCCTAGAGAGTCACCG 60.077 63.158 2.82 0.00 0.00 4.94
7435 11268 0.033011 TCAGGGCCTAGAGAGTCACC 60.033 60.000 5.28 0.00 0.00 4.02
7436 11269 1.107945 GTCAGGGCCTAGAGAGTCAC 58.892 60.000 5.28 0.00 0.00 3.67
7437 11270 0.394488 CGTCAGGGCCTAGAGAGTCA 60.394 60.000 5.28 0.00 0.00 3.41
7438 11271 0.107116 TCGTCAGGGCCTAGAGAGTC 60.107 60.000 5.28 0.00 0.00 3.36
7439 11272 0.106918 CTCGTCAGGGCCTAGAGAGT 60.107 60.000 21.35 0.00 0.00 3.24
7440 11273 1.452145 GCTCGTCAGGGCCTAGAGAG 61.452 65.000 26.86 23.66 38.09 3.20
7441 11274 1.454111 GCTCGTCAGGGCCTAGAGA 60.454 63.158 26.86 16.75 38.09 3.10
7442 11275 3.124686 GCTCGTCAGGGCCTAGAG 58.875 66.667 21.50 21.50 38.09 2.43
7475 11308 0.969894 AGAGTACAGCCTGAGCGTTT 59.030 50.000 0.00 0.00 46.67 3.60
7480 11313 0.829333 ATGCCAGAGTACAGCCTGAG 59.171 55.000 0.00 3.96 32.37 3.35
7483 11316 1.630126 CCCATGCCAGAGTACAGCCT 61.630 60.000 0.00 0.00 0.00 4.58
7489 11322 0.251916 CGGTTTCCCATGCCAGAGTA 59.748 55.000 0.00 0.00 0.00 2.59
7611 11456 5.277202 CCATCACTCGTTCATATTCAAGCAG 60.277 44.000 0.00 0.00 0.00 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.