Multiple sequence alignment - TraesCS1A01G363300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G363300 chr1A 100.000 5324 0 0 1 5324 543956936 543962259 0.000000e+00 9832.0
1 TraesCS1A01G363300 chr1A 76.482 1029 124 55 896 1869 34286511 34287476 8.130000e-123 451.0
2 TraesCS1A01G363300 chr1A 81.395 215 20 10 407 621 34269742 34269936 1.980000e-34 158.0
3 TraesCS1A01G363300 chr1D 91.620 3544 170 57 312 3782 447860233 447863722 0.000000e+00 4782.0
4 TraesCS1A01G363300 chr1D 86.239 654 63 17 3809 4445 447863861 447864504 0.000000e+00 684.0
5 TraesCS1A01G363300 chr1D 82.507 343 29 16 4990 5324 447883268 447883587 6.790000e-69 272.0
6 TraesCS1A01G363300 chr1D 86.640 247 17 5 10 241 447859988 447860233 5.290000e-65 259.0
7 TraesCS1A01G363300 chr1B 89.688 3239 174 70 642 3797 613320798 613323959 0.000000e+00 3984.0
8 TraesCS1A01G363300 chr1B 86.418 670 66 16 3799 4453 613323997 613324656 0.000000e+00 710.0
9 TraesCS1A01G363300 chr1B 81.667 360 34 13 4484 4831 613324727 613325066 2.440000e-68 270.0
10 TraesCS1A01G363300 chr1B 94.737 57 1 2 5087 5142 613325882 613325937 2.640000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G363300 chr1A 543956936 543962259 5323 False 9832.000000 9832 100.000000 1 5324 1 chr1A.!!$F3 5323
1 TraesCS1A01G363300 chr1A 34286511 34287476 965 False 451.000000 451 76.482000 896 1869 1 chr1A.!!$F2 973
2 TraesCS1A01G363300 chr1D 447859988 447864504 4516 False 1908.333333 4782 88.166333 10 4445 3 chr1D.!!$F2 4435
3 TraesCS1A01G363300 chr1B 613320798 613325937 5139 False 1262.975000 3984 88.127500 642 5142 4 chr1B.!!$F1 4500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
91 92 0.306533 CGTTGTTTAGGTTGCGTGCT 59.693 50.000 0.00 0.0 0.00 4.40 F
413 429 0.604511 ACTTCCCTGGTTTTACGCCG 60.605 55.000 0.00 0.0 0.00 6.46 F
1391 1499 0.631212 AATCCTCCATGGGTTGGGAC 59.369 55.000 13.02 0.0 46.45 4.46 F
1537 1649 0.601558 ACCCGAATGACCGATATCCG 59.398 55.000 0.00 0.0 38.18 4.18 F
2063 2230 0.937304 TGTTCGTGAAAGCTGTGAGC 59.063 50.000 0.00 0.0 42.84 4.26 F
3462 3644 1.200948 AGAGCGTACCACGGAGTAAAC 59.799 52.381 0.44 0.0 41.61 2.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1391 1499 0.040067 GCTGCTCTTTCAACCCAACG 60.040 55.000 0.00 0.00 0.00 4.10 R
1466 1576 0.446222 AATCGGATCAAACGCAACCG 59.554 50.000 0.00 0.00 44.09 4.44 R
3081 3260 0.336737 AGATCGACCCTTCACTCCCT 59.663 55.000 0.00 0.00 0.00 4.20 R
3530 3712 1.375908 GACAAGGCAGGCATCGTGA 60.376 57.895 0.00 0.00 0.00 4.35 R
4023 4331 0.667487 ACTGCAGAATCCGTGACACG 60.667 55.000 23.35 21.02 42.11 4.49 R
5004 5978 0.099436 GAATTCACGGCAGCACATCC 59.901 55.000 0.00 0.00 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 3.250744 CACTAGTTCGATCGGCAAAAGA 58.749 45.455 16.41 0.00 0.00 2.52
73 74 0.460987 AAGAGAGCTCAAATCGGGCG 60.461 55.000 17.77 0.00 0.00 6.13
76 77 1.021390 AGAGCTCAAATCGGGCGTTG 61.021 55.000 17.77 0.00 0.00 4.10
78 79 0.889186 AGCTCAAATCGGGCGTTGTT 60.889 50.000 0.00 0.00 0.00 2.83
84 85 1.900245 AATCGGGCGTTGTTTAGGTT 58.100 45.000 0.00 0.00 0.00 3.50
91 92 0.306533 CGTTGTTTAGGTTGCGTGCT 59.693 50.000 0.00 0.00 0.00 4.40
102 103 3.660111 GCGTGCTGGTGGTGGTTC 61.660 66.667 0.00 0.00 0.00 3.62
128 129 3.795688 TTGGCTCATCTCCTTCAGTTT 57.204 42.857 0.00 0.00 0.00 2.66
175 191 1.169661 TCGTCAAGCCGGCACATTTT 61.170 50.000 31.54 11.17 0.00 1.82
212 228 1.202758 TCTGCTTCCGATTGGTGTGTT 60.203 47.619 0.00 0.00 36.30 3.32
214 230 0.951558 GCTTCCGATTGGTGTGTTGT 59.048 50.000 0.00 0.00 36.30 3.32
218 234 1.944024 TCCGATTGGTGTGTTGTGTTC 59.056 47.619 0.00 0.00 36.30 3.18
224 240 4.442375 TTGGTGTGTTGTGTTCGATTTT 57.558 36.364 0.00 0.00 0.00 1.82
231 247 5.574830 TGTGTTGTGTTCGATTTTCTTTTGG 59.425 36.000 0.00 0.00 0.00 3.28
232 248 5.005299 GTGTTGTGTTCGATTTTCTTTTGGG 59.995 40.000 0.00 0.00 0.00 4.12
240 256 5.778862 TCGATTTTCTTTTGGGTTTCCATC 58.221 37.500 0.00 0.00 43.63 3.51
241 257 5.303078 TCGATTTTCTTTTGGGTTTCCATCA 59.697 36.000 0.00 0.00 43.63 3.07
242 258 6.014669 TCGATTTTCTTTTGGGTTTCCATCAT 60.015 34.615 0.00 0.00 43.63 2.45
243 259 7.177568 TCGATTTTCTTTTGGGTTTCCATCATA 59.822 33.333 0.00 0.00 43.63 2.15
244 260 7.981225 CGATTTTCTTTTGGGTTTCCATCATAT 59.019 33.333 0.00 0.00 43.63 1.78
245 261 9.317936 GATTTTCTTTTGGGTTTCCATCATATC 57.682 33.333 0.00 0.00 43.63 1.63
246 262 8.434589 TTTTCTTTTGGGTTTCCATCATATCT 57.565 30.769 0.00 0.00 43.63 1.98
247 263 9.540538 TTTTCTTTTGGGTTTCCATCATATCTA 57.459 29.630 0.00 0.00 43.63 1.98
248 264 8.752005 TTCTTTTGGGTTTCCATCATATCTAG 57.248 34.615 0.00 0.00 43.63 2.43
249 265 8.101309 TCTTTTGGGTTTCCATCATATCTAGA 57.899 34.615 0.00 0.00 43.63 2.43
250 266 8.556589 TCTTTTGGGTTTCCATCATATCTAGAA 58.443 33.333 0.00 0.00 43.63 2.10
251 267 9.359653 CTTTTGGGTTTCCATCATATCTAGAAT 57.640 33.333 0.00 0.00 43.63 2.40
252 268 9.713684 TTTTGGGTTTCCATCATATCTAGAATT 57.286 29.630 0.00 0.00 43.63 2.17
253 269 9.713684 TTTGGGTTTCCATCATATCTAGAATTT 57.286 29.630 0.00 0.00 43.63 1.82
254 270 8.696043 TGGGTTTCCATCATATCTAGAATTTG 57.304 34.615 0.00 0.00 38.32 2.32
255 271 7.231317 TGGGTTTCCATCATATCTAGAATTTGC 59.769 37.037 0.00 0.00 38.32 3.68
256 272 7.301054 GGTTTCCATCATATCTAGAATTTGCG 58.699 38.462 0.00 0.00 0.00 4.85
257 273 7.301054 GTTTCCATCATATCTAGAATTTGCGG 58.699 38.462 0.00 0.00 0.00 5.69
258 274 6.358974 TCCATCATATCTAGAATTTGCGGA 57.641 37.500 0.00 0.00 0.00 5.54
259 275 6.768483 TCCATCATATCTAGAATTTGCGGAA 58.232 36.000 0.00 0.00 0.00 4.30
260 276 6.650807 TCCATCATATCTAGAATTTGCGGAAC 59.349 38.462 0.00 0.00 0.00 3.62
261 277 6.128172 CCATCATATCTAGAATTTGCGGAACC 60.128 42.308 0.00 0.00 0.00 3.62
262 278 4.988540 TCATATCTAGAATTTGCGGAACCG 59.011 41.667 9.00 9.00 43.09 4.44
274 290 2.415697 CGGAACCGCAATTTTCACTT 57.584 45.000 0.00 0.00 0.00 3.16
275 291 2.738135 CGGAACCGCAATTTTCACTTT 58.262 42.857 0.00 0.00 0.00 2.66
276 292 3.891324 CGGAACCGCAATTTTCACTTTA 58.109 40.909 0.00 0.00 0.00 1.85
277 293 3.911964 CGGAACCGCAATTTTCACTTTAG 59.088 43.478 0.00 0.00 0.00 1.85
278 294 4.319911 CGGAACCGCAATTTTCACTTTAGA 60.320 41.667 0.00 0.00 0.00 2.10
279 295 5.525199 GGAACCGCAATTTTCACTTTAGAA 58.475 37.500 0.00 0.00 0.00 2.10
280 296 6.156519 GGAACCGCAATTTTCACTTTAGAAT 58.843 36.000 0.00 0.00 0.00 2.40
281 297 6.308041 GGAACCGCAATTTTCACTTTAGAATC 59.692 38.462 0.00 0.00 0.00 2.52
282 298 6.325919 ACCGCAATTTTCACTTTAGAATCA 57.674 33.333 0.00 0.00 0.00 2.57
283 299 6.149633 ACCGCAATTTTCACTTTAGAATCAC 58.850 36.000 0.00 0.00 0.00 3.06
284 300 5.572896 CCGCAATTTTCACTTTAGAATCACC 59.427 40.000 0.00 0.00 0.00 4.02
285 301 5.572896 CGCAATTTTCACTTTAGAATCACCC 59.427 40.000 0.00 0.00 0.00 4.61
286 302 5.869344 GCAATTTTCACTTTAGAATCACCCC 59.131 40.000 0.00 0.00 0.00 4.95
287 303 6.295292 GCAATTTTCACTTTAGAATCACCCCT 60.295 38.462 0.00 0.00 0.00 4.79
288 304 7.670364 CAATTTTCACTTTAGAATCACCCCTT 58.330 34.615 0.00 0.00 0.00 3.95
289 305 6.894339 TTTTCACTTTAGAATCACCCCTTC 57.106 37.500 0.00 0.00 0.00 3.46
290 306 4.202245 TCACTTTAGAATCACCCCTTCG 57.798 45.455 0.00 0.00 0.00 3.79
291 307 3.835978 TCACTTTAGAATCACCCCTTCGA 59.164 43.478 0.00 0.00 0.00 3.71
292 308 4.469945 TCACTTTAGAATCACCCCTTCGAT 59.530 41.667 0.00 0.00 0.00 3.59
293 309 5.045869 TCACTTTAGAATCACCCCTTCGATT 60.046 40.000 0.00 0.00 34.58 3.34
294 310 5.294552 CACTTTAGAATCACCCCTTCGATTC 59.705 44.000 0.00 0.00 45.15 2.52
296 312 2.311124 GAATCACCCCTTCGATTCGT 57.689 50.000 5.89 0.00 38.49 3.85
297 313 2.629051 GAATCACCCCTTCGATTCGTT 58.371 47.619 5.89 0.00 38.49 3.85
298 314 2.311124 ATCACCCCTTCGATTCGTTC 57.689 50.000 5.89 0.00 0.00 3.95
299 315 1.263356 TCACCCCTTCGATTCGTTCT 58.737 50.000 5.89 0.00 0.00 3.01
300 316 2.449464 TCACCCCTTCGATTCGTTCTA 58.551 47.619 5.89 0.00 0.00 2.10
301 317 3.028850 TCACCCCTTCGATTCGTTCTAT 58.971 45.455 5.89 0.00 0.00 1.98
302 318 3.449737 TCACCCCTTCGATTCGTTCTATT 59.550 43.478 5.89 0.00 0.00 1.73
303 319 3.802685 CACCCCTTCGATTCGTTCTATTC 59.197 47.826 5.89 0.00 0.00 1.75
304 320 3.705072 ACCCCTTCGATTCGTTCTATTCT 59.295 43.478 5.89 0.00 0.00 2.40
305 321 4.161754 ACCCCTTCGATTCGTTCTATTCTT 59.838 41.667 5.89 0.00 0.00 2.52
306 322 4.745620 CCCCTTCGATTCGTTCTATTCTTC 59.254 45.833 5.89 0.00 0.00 2.87
307 323 5.452077 CCCCTTCGATTCGTTCTATTCTTCT 60.452 44.000 5.89 0.00 0.00 2.85
308 324 5.460419 CCCTTCGATTCGTTCTATTCTTCTG 59.540 44.000 5.89 0.00 0.00 3.02
309 325 6.037098 CCTTCGATTCGTTCTATTCTTCTGT 58.963 40.000 5.89 0.00 0.00 3.41
310 326 6.197468 CCTTCGATTCGTTCTATTCTTCTGTC 59.803 42.308 5.89 0.00 0.00 3.51
319 335 6.647067 CGTTCTATTCTTCTGTCCTTTCAGTT 59.353 38.462 0.00 0.00 36.85 3.16
330 346 8.463930 TCTGTCCTTTCAGTTATTTGATTTGT 57.536 30.769 0.00 0.00 36.85 2.83
333 349 7.860373 TGTCCTTTCAGTTATTTGATTTGTTCG 59.140 33.333 0.00 0.00 0.00 3.95
334 350 7.326063 GTCCTTTCAGTTATTTGATTTGTTCGG 59.674 37.037 0.00 0.00 0.00 4.30
335 351 7.013846 TCCTTTCAGTTATTTGATTTGTTCGGT 59.986 33.333 0.00 0.00 0.00 4.69
336 352 7.114811 CCTTTCAGTTATTTGATTTGTTCGGTG 59.885 37.037 0.00 0.00 0.00 4.94
340 356 8.622157 TCAGTTATTTGATTTGTTCGGTGTAAA 58.378 29.630 0.00 0.00 0.00 2.01
347 363 6.434596 TGATTTGTTCGGTGTAAATGAGTTG 58.565 36.000 0.00 0.00 0.00 3.16
348 364 6.261158 TGATTTGTTCGGTGTAAATGAGTTGA 59.739 34.615 0.00 0.00 0.00 3.18
373 389 1.891150 AGCTGAATTTCCAGGCACTTG 59.109 47.619 0.00 0.00 34.60 3.16
413 429 0.604511 ACTTCCCTGGTTTTACGCCG 60.605 55.000 0.00 0.00 0.00 6.46
463 480 4.980805 TCCCCACGCACAACTCGC 62.981 66.667 0.00 0.00 0.00 5.03
467 484 1.369209 CCACGCACAACTCGCAAAG 60.369 57.895 0.00 0.00 0.00 2.77
468 485 1.369209 CACGCACAACTCGCAAAGG 60.369 57.895 0.00 0.00 0.00 3.11
535 552 8.562892 CAGTGAATTGAGTTGAATCTAAGTGTT 58.437 33.333 0.00 0.00 0.00 3.32
551 568 7.060421 TCTAAGTGTTCATCCCTTGTTCTTTT 58.940 34.615 0.00 0.00 0.00 2.27
621 638 5.507985 CCAAACTCCTCCTGTTCATTTCAAC 60.508 44.000 0.00 0.00 0.00 3.18
622 639 4.437682 ACTCCTCCTGTTCATTTCAACA 57.562 40.909 0.00 0.00 34.99 3.33
623 640 4.137543 ACTCCTCCTGTTCATTTCAACAC 58.862 43.478 0.00 0.00 32.70 3.32
624 641 4.136796 CTCCTCCTGTTCATTTCAACACA 58.863 43.478 0.00 0.00 32.70 3.72
625 642 4.531854 TCCTCCTGTTCATTTCAACACAA 58.468 39.130 0.00 0.00 32.70 3.33
626 643 5.139727 TCCTCCTGTTCATTTCAACACAAT 58.860 37.500 0.00 0.00 32.70 2.71
627 644 5.598005 TCCTCCTGTTCATTTCAACACAATT 59.402 36.000 0.00 0.00 32.70 2.32
628 645 6.098124 TCCTCCTGTTCATTTCAACACAATTT 59.902 34.615 0.00 0.00 32.70 1.82
629 646 6.201425 CCTCCTGTTCATTTCAACACAATTTG 59.799 38.462 0.00 0.00 32.70 2.32
630 647 6.871844 TCCTGTTCATTTCAACACAATTTGA 58.128 32.000 2.79 0.00 32.70 2.69
631 648 6.756074 TCCTGTTCATTTCAACACAATTTGAC 59.244 34.615 2.79 0.00 35.18 3.18
632 649 6.757947 CCTGTTCATTTCAACACAATTTGACT 59.242 34.615 2.79 0.00 35.18 3.41
633 650 7.254185 CCTGTTCATTTCAACACAATTTGACTG 60.254 37.037 2.79 0.00 35.18 3.51
634 651 7.318893 TGTTCATTTCAACACAATTTGACTGA 58.681 30.769 2.79 0.16 35.18 3.41
669 686 4.094590 CAGTGAATGGAGTTGAATCTGAGC 59.905 45.833 0.00 0.00 0.00 4.26
675 692 2.926838 GGAGTTGAATCTGAGCGTTCTC 59.073 50.000 0.00 0.00 39.78 2.87
691 708 3.172824 GTTCTCTCGATGTTTCGGTCTC 58.827 50.000 0.00 0.00 45.53 3.36
751 768 7.381766 TCATGTTCATTTCAATTCGACTGAT 57.618 32.000 0.00 0.00 0.00 2.90
809 826 3.594232 TCCCCTTTTTACCCTCTGCATTA 59.406 43.478 0.00 0.00 0.00 1.90
810 827 4.231890 TCCCCTTTTTACCCTCTGCATTAT 59.768 41.667 0.00 0.00 0.00 1.28
811 828 4.962362 CCCCTTTTTACCCTCTGCATTATT 59.038 41.667 0.00 0.00 0.00 1.40
812 829 5.069119 CCCCTTTTTACCCTCTGCATTATTC 59.931 44.000 0.00 0.00 0.00 1.75
838 883 8.028938 CAGTATCCTTCAACTTTATTTGGTTGG 58.971 37.037 0.00 0.00 41.91 3.77
871 916 5.747197 GCCATCACAAAATAATTGAGCTGAG 59.253 40.000 0.00 0.00 0.00 3.35
915 961 2.955660 GTGTCCATGTTTTGGTCTTCCA 59.044 45.455 0.00 0.00 46.52 3.53
950 996 0.859232 CAACTCACCCTGTTCGTTCG 59.141 55.000 0.00 0.00 0.00 3.95
971 1018 7.165812 CGTTCGTTCAATCTGACTGAAATTTTT 59.834 33.333 2.80 0.00 34.68 1.94
1149 1208 4.600576 TGCGTCAAGGTGCAGCGA 62.601 61.111 10.78 0.00 35.90 4.93
1285 1362 4.148825 GCGCCATCAGGTCCGTCT 62.149 66.667 0.00 0.00 37.19 4.18
1286 1363 2.105128 CGCCATCAGGTCCGTCTC 59.895 66.667 0.00 0.00 37.19 3.36
1296 1377 4.779733 TCCGTCTCTCCCCCTGCC 62.780 72.222 0.00 0.00 0.00 4.85
1390 1498 0.926293 GAATCCTCCATGGGTTGGGA 59.074 55.000 13.02 14.45 46.45 4.37
1391 1499 0.631212 AATCCTCCATGGGTTGGGAC 59.369 55.000 13.02 0.00 46.45 4.46
1414 1524 1.246737 GGGTTGAAAGAGCAGCTGGG 61.247 60.000 17.12 0.00 0.00 4.45
1466 1576 2.872858 ACTTGGAGCGTCAGAAAGTTTC 59.127 45.455 7.57 7.57 0.00 2.78
1521 1633 5.710099 TCAAATGTGGATCTGTTCTTTACCC 59.290 40.000 0.00 0.00 0.00 3.69
1524 1636 3.325425 TGTGGATCTGTTCTTTACCCGAA 59.675 43.478 0.00 0.00 0.00 4.30
1537 1649 0.601558 ACCCGAATGACCGATATCCG 59.398 55.000 0.00 0.00 38.18 4.18
1556 1668 1.653151 GTAGCGGAGTTGGTGATTCC 58.347 55.000 0.00 0.00 0.00 3.01
1671 1821 5.694995 ACCTTCTGTTCTTCCAAAAGATGA 58.305 37.500 0.00 0.00 41.12 2.92
1672 1822 6.310149 ACCTTCTGTTCTTCCAAAAGATGAT 58.690 36.000 0.00 0.00 41.12 2.45
1673 1823 6.208204 ACCTTCTGTTCTTCCAAAAGATGATG 59.792 38.462 0.00 0.00 41.12 3.07
1674 1824 6.349944 CCTTCTGTTCTTCCAAAAGATGATGG 60.350 42.308 0.00 0.00 41.12 3.51
1675 1825 5.012239 TCTGTTCTTCCAAAAGATGATGGG 58.988 41.667 0.00 0.00 41.12 4.00
1717 1873 5.997746 TCTTTCAAGTTATCCTGGTCAAGTG 59.002 40.000 0.00 0.00 0.00 3.16
2025 2192 5.817296 TGATCCGTGAATCTTCGATTTTGAT 59.183 36.000 0.00 0.00 0.00 2.57
2032 2199 6.686253 GTGAATCTTCGATTTTGATCTGCTTC 59.314 38.462 0.00 0.00 0.00 3.86
2063 2230 0.937304 TGTTCGTGAAAGCTGTGAGC 59.063 50.000 0.00 0.00 42.84 4.26
2156 2323 3.807622 TGTATCGGCTATTTTACTGCTGC 59.192 43.478 0.00 0.00 33.50 5.25
2222 2389 3.441222 CAGTCACCACCACACGTATAGTA 59.559 47.826 0.00 0.00 0.00 1.82
2262 2429 4.089065 GCTTGTTCATTCATTGTTCTTCGC 59.911 41.667 0.00 0.00 0.00 4.70
2324 2491 6.466097 GTCGAAGTTATTGTTTGCTTGCTATC 59.534 38.462 0.00 0.00 0.00 2.08
2377 2544 3.403558 GCAGTCCCCACTCTCCCC 61.404 72.222 0.00 0.00 0.00 4.81
2378 2545 2.122729 CAGTCCCCACTCTCCCCA 59.877 66.667 0.00 0.00 0.00 4.96
2420 2587 6.392353 TGATTTGCAGTCATAAATTTTGCG 57.608 33.333 0.00 0.00 37.58 4.85
2512 2681 9.713740 CAATTGAATAGATTTCTGTCTGTAAGC 57.286 33.333 0.00 0.00 0.00 3.09
2651 2828 6.448006 ACTGTATCTCATCCGTGTTATTAGC 58.552 40.000 0.00 0.00 0.00 3.09
3081 3260 1.289066 CAAGAAGGGCTCGTCGTCA 59.711 57.895 0.00 0.00 0.00 4.35
3096 3275 1.592223 GTCAGGGAGTGAAGGGTCG 59.408 63.158 0.00 0.00 36.74 4.79
3105 3284 1.612146 TGAAGGGTCGATCTGGCCA 60.612 57.895 4.71 4.71 0.00 5.36
3255 3434 2.443255 TCTCCTCAGCTCCCAAACTTTT 59.557 45.455 0.00 0.00 0.00 2.27
3262 3441 4.578928 TCAGCTCCCAAACTTTTAACTGTC 59.421 41.667 0.00 0.00 0.00 3.51
3263 3442 4.338118 CAGCTCCCAAACTTTTAACTGTCA 59.662 41.667 0.00 0.00 0.00 3.58
3290 3472 7.261325 TCATTTCACTTAGGATTCTTCTCTCG 58.739 38.462 0.00 0.00 0.00 4.04
3296 3478 6.094881 CACTTAGGATTCTTCTCTCGTCTTCT 59.905 42.308 0.00 0.00 0.00 2.85
3300 3482 6.162777 AGGATTCTTCTCTCGTCTTCTTTTG 58.837 40.000 0.00 0.00 0.00 2.44
3301 3483 6.015010 AGGATTCTTCTCTCGTCTTCTTTTGA 60.015 38.462 0.00 0.00 0.00 2.69
3358 3540 8.831715 AGTAAATAAATTGGTTTCCTTGCTTG 57.168 30.769 0.00 0.00 0.00 4.01
3361 3543 7.495135 AATAAATTGGTTTCCTTGCTTGTTG 57.505 32.000 0.00 0.00 0.00 3.33
3374 3556 1.881973 GCTTGTTGCACAGAGATTCCA 59.118 47.619 0.00 0.00 42.31 3.53
3375 3557 2.095364 GCTTGTTGCACAGAGATTCCAG 60.095 50.000 0.00 0.00 42.31 3.86
3376 3558 2.936919 TGTTGCACAGAGATTCCAGT 57.063 45.000 0.00 0.00 0.00 4.00
3411 3593 3.513912 TGCACAGCAGTACTACTAATGGT 59.486 43.478 0.00 0.00 33.32 3.55
3432 3614 7.531857 TGGTTCCAAACTTAAATGCAAGATA 57.468 32.000 0.00 0.00 0.00 1.98
3462 3644 1.200948 AGAGCGTACCACGGAGTAAAC 59.799 52.381 0.44 0.00 41.61 2.01
3474 3656 6.148811 ACCACGGAGTAAACACATTTGAATAG 59.851 38.462 0.00 0.00 41.61 1.73
3500 3682 4.884164 ACTTTTAATAGAGACAGGGCATGC 59.116 41.667 9.90 9.90 0.00 4.06
3530 3712 2.224719 GGAGCATATGGCCATCTCTGTT 60.225 50.000 24.80 16.07 46.50 3.16
3592 3774 8.934825 GTGCAAATAAAATAGCAAAAGATTCCA 58.065 29.630 0.00 0.00 38.91 3.53
3741 3923 7.121463 TGTGTTGTGTTGTTCCTACTGTTTAAT 59.879 33.333 0.00 0.00 0.00 1.40
3890 4197 4.021981 AGCATGCTTTGGAGTTAAGGTTTC 60.022 41.667 16.30 0.00 0.00 2.78
3899 4206 9.731819 CTTTGGAGTTAAGGTTTCTTTTTAGAC 57.268 33.333 0.00 0.00 34.59 2.59
3905 4212 9.457436 AGTTAAGGTTTCTTTTTAGACACTTGA 57.543 29.630 0.00 0.00 34.59 3.02
3908 4215 6.796426 AGGTTTCTTTTTAGACACTTGAAGC 58.204 36.000 0.00 0.00 0.00 3.86
3957 4264 6.504398 AGTTTAGCTTTAGAAAACAGTTGGC 58.496 36.000 10.76 0.00 35.93 4.52
3960 4267 2.661594 CTTTAGAAAACAGTTGGCGCC 58.338 47.619 22.73 22.73 0.00 6.53
3961 4268 1.681538 TTAGAAAACAGTTGGCGCCA 58.318 45.000 29.03 29.03 0.00 5.69
3962 4269 1.681538 TAGAAAACAGTTGGCGCCAA 58.318 45.000 37.30 37.30 0.00 4.52
4031 4350 1.128878 TGTTGTTGAAACCGTGTCACG 59.871 47.619 18.54 18.54 42.11 4.35
4040 4359 4.260194 CGTGTCACGGATTCTGCA 57.740 55.556 17.75 0.00 38.08 4.41
4046 4365 1.728971 GTCACGGATTCTGCAGTTCTG 59.271 52.381 14.67 17.99 0.00 3.02
4050 4369 1.066573 CGGATTCTGCAGTTCTGACCT 60.067 52.381 14.67 0.00 0.00 3.85
4051 4370 2.354259 GGATTCTGCAGTTCTGACCTG 58.646 52.381 14.67 0.00 0.00 4.00
4053 4372 3.370315 GGATTCTGCAGTTCTGACCTGAT 60.370 47.826 14.67 0.00 0.00 2.90
4054 4373 2.756840 TCTGCAGTTCTGACCTGATG 57.243 50.000 14.67 0.00 0.00 3.07
4060 4379 3.316308 GCAGTTCTGACCTGATGTTTGTT 59.684 43.478 6.38 0.00 0.00 2.83
4064 4383 5.066505 AGTTCTGACCTGATGTTTGTTTGTC 59.933 40.000 0.00 0.00 0.00 3.18
4072 4391 5.693104 CCTGATGTTTGTTTGTCCATCTTTG 59.307 40.000 0.00 0.00 35.76 2.77
4094 4413 2.513753 CAGTTTGTATGCCCTGGAACA 58.486 47.619 0.00 0.00 0.00 3.18
4189 4508 7.038445 AGGCTAGCATAACATGTTATCATCTCT 60.038 37.037 24.99 18.06 33.79 3.10
4190 4509 7.064371 GGCTAGCATAACATGTTATCATCTCTG 59.936 40.741 24.99 16.01 33.79 3.35
4201 4520 6.640518 TGTTATCATCTCTGGTCCTGTAAAC 58.359 40.000 0.00 0.00 0.00 2.01
4215 4534 2.744202 CTGTAAACCCTGCATCACTCAC 59.256 50.000 0.00 0.00 0.00 3.51
4218 4537 2.046988 CCCTGCATCACTCACGCA 60.047 61.111 0.00 0.00 0.00 5.24
4231 4550 3.859961 CACTCACGCACTAGGTAGAAATG 59.140 47.826 0.00 0.00 0.00 2.32
4235 4554 4.219944 TCACGCACTAGGTAGAAATGAACT 59.780 41.667 0.00 0.00 0.00 3.01
4272 4592 2.622722 CTTGCTCGATTTCGCAGCGG 62.623 60.000 16.42 0.00 41.71 5.52
4332 4652 3.376546 AGTCGGAAGAGTAATGGTACGAC 59.623 47.826 0.00 0.00 46.75 4.34
4375 4696 6.816140 AGCTGAGCAGTTAGAAAGAAGAATAC 59.184 38.462 7.39 0.00 0.00 1.89
4402 4723 0.179100 CACCGCCACAGATCCAGTAG 60.179 60.000 0.00 0.00 0.00 2.57
4408 4729 1.471676 CCACAGATCCAGTAGCCGAAC 60.472 57.143 0.00 0.00 0.00 3.95
4409 4730 0.824759 ACAGATCCAGTAGCCGAACC 59.175 55.000 0.00 0.00 0.00 3.62
4410 4731 0.824109 CAGATCCAGTAGCCGAACCA 59.176 55.000 0.00 0.00 0.00 3.67
4411 4732 1.207089 CAGATCCAGTAGCCGAACCAA 59.793 52.381 0.00 0.00 0.00 3.67
4412 4733 1.906574 AGATCCAGTAGCCGAACCAAA 59.093 47.619 0.00 0.00 0.00 3.28
4413 4734 2.093447 AGATCCAGTAGCCGAACCAAAG 60.093 50.000 0.00 0.00 0.00 2.77
4414 4735 1.344065 TCCAGTAGCCGAACCAAAGA 58.656 50.000 0.00 0.00 0.00 2.52
4415 4736 1.906574 TCCAGTAGCCGAACCAAAGAT 59.093 47.619 0.00 0.00 0.00 2.40
4416 4737 2.304761 TCCAGTAGCCGAACCAAAGATT 59.695 45.455 0.00 0.00 0.00 2.40
4417 4738 2.420022 CCAGTAGCCGAACCAAAGATTG 59.580 50.000 0.00 0.00 0.00 2.67
4418 4739 2.084546 AGTAGCCGAACCAAAGATTGC 58.915 47.619 0.00 0.00 0.00 3.56
4422 4743 2.299867 AGCCGAACCAAAGATTGCAAAT 59.700 40.909 1.71 0.00 0.00 2.32
4424 4745 4.021544 AGCCGAACCAAAGATTGCAAATTA 60.022 37.500 1.71 0.00 0.00 1.40
4426 4747 5.389411 GCCGAACCAAAGATTGCAAATTAAC 60.389 40.000 1.71 0.00 0.00 2.01
4428 4749 5.925969 CGAACCAAAGATTGCAAATTAACCT 59.074 36.000 1.71 0.00 0.00 3.50
4429 4750 6.089417 CGAACCAAAGATTGCAAATTAACCTC 59.911 38.462 1.71 0.00 0.00 3.85
4439 4760 3.067320 GCAAATTAACCTCTCCCAGATGC 59.933 47.826 0.00 0.00 0.00 3.91
4445 4766 1.918262 ACCTCTCCCAGATGCAATGAA 59.082 47.619 3.95 0.00 0.00 2.57
4448 4769 3.552875 CTCTCCCAGATGCAATGAACAT 58.447 45.455 3.95 0.00 0.00 2.71
4453 4774 2.159014 CCAGATGCAATGAACATTGGGG 60.159 50.000 23.05 4.81 46.14 4.96
4455 4776 1.483415 GATGCAATGAACATTGGGGCT 59.517 47.619 23.05 5.38 46.14 5.19
4456 4777 0.609151 TGCAATGAACATTGGGGCTG 59.391 50.000 23.05 4.20 46.14 4.85
4457 4778 0.896923 GCAATGAACATTGGGGCTGA 59.103 50.000 23.05 0.00 46.14 4.26
4458 4779 1.404583 GCAATGAACATTGGGGCTGAC 60.405 52.381 23.05 6.51 46.14 3.51
4460 4781 0.680921 ATGAACATTGGGGCTGACCG 60.681 55.000 0.00 0.00 41.60 4.79
4467 4788 4.821589 GGGGCTGACCGCTTCTCG 62.822 72.222 0.00 0.00 45.36 4.04
4511 4872 0.380378 CGGGTTATTTCCGTGCATGG 59.620 55.000 19.62 19.62 42.33 3.66
4518 4879 0.537143 TTTCCGTGCATGGCTCTGTT 60.537 50.000 20.86 0.00 0.00 3.16
4519 4880 0.537143 TTCCGTGCATGGCTCTGTTT 60.537 50.000 20.86 0.00 0.00 2.83
4554 4917 4.395581 GCGTTGGCTATATCATCTTGTG 57.604 45.455 0.00 0.00 35.83 3.33
4560 4923 4.144297 GGCTATATCATCTTGTGCCCAAA 58.856 43.478 0.00 0.00 33.45 3.28
4592 4955 6.484288 ACCTCATGTTGATACCATTTGAGAA 58.516 36.000 0.00 0.00 0.00 2.87
4596 4959 9.112725 CTCATGTTGATACCATTTGAGAACATA 57.887 33.333 0.00 0.00 32.66 2.29
4598 4961 9.673454 CATGTTGATACCATTTGAGAACATATG 57.327 33.333 0.00 0.00 36.00 1.78
4600 4963 7.338957 TGTTGATACCATTTGAGAACATATGCA 59.661 33.333 1.58 0.00 35.30 3.96
4601 4964 8.355169 GTTGATACCATTTGAGAACATATGCAT 58.645 33.333 3.79 3.79 35.30 3.96
4602 4965 8.102800 TGATACCATTTGAGAACATATGCATC 57.897 34.615 0.19 1.68 35.30 3.91
4603 4966 7.940688 TGATACCATTTGAGAACATATGCATCT 59.059 33.333 0.19 10.52 35.30 2.90
4604 4967 6.630444 ACCATTTGAGAACATATGCATCTC 57.370 37.500 22.97 22.97 39.98 2.75
4605 4968 5.237996 ACCATTTGAGAACATATGCATCTCG 59.762 40.000 23.59 15.85 41.96 4.04
4606 4969 4.801147 TTTGAGAACATATGCATCTCGC 57.199 40.909 23.59 10.96 41.96 5.03
4607 4970 3.740631 TGAGAACATATGCATCTCGCT 57.259 42.857 23.59 0.00 41.96 4.93
4608 4971 3.387397 TGAGAACATATGCATCTCGCTG 58.613 45.455 23.59 0.00 41.96 5.18
4609 4972 3.181472 TGAGAACATATGCATCTCGCTGT 60.181 43.478 23.59 0.00 41.96 4.40
4616 4981 0.867746 TGCATCTCGCTGTGTCAAAC 59.132 50.000 0.00 0.00 43.06 2.93
4617 4982 1.151668 GCATCTCGCTGTGTCAAACT 58.848 50.000 0.00 0.00 37.77 2.66
4624 4989 1.383456 GCTGTGTCAAACTGGTGCCA 61.383 55.000 0.00 0.00 0.00 4.92
4628 4993 2.294074 GTGTCAAACTGGTGCCAAGTA 58.706 47.619 0.00 0.00 0.00 2.24
4630 4995 2.092646 TGTCAAACTGGTGCCAAGTAGT 60.093 45.455 0.00 0.00 0.00 2.73
4641 5006 1.275291 GCCAAGTAGTGTGCTCCAGTA 59.725 52.381 0.00 0.00 0.00 2.74
4646 5014 1.893801 GTAGTGTGCTCCAGTACAGGT 59.106 52.381 3.99 0.00 45.54 4.00
4673 5041 2.653115 GGTTTGCCCTCTGCTTGC 59.347 61.111 0.00 0.00 42.00 4.01
4699 5067 6.826741 ACTGGCAAATGACGGTAATAATACTT 59.173 34.615 0.00 0.00 41.84 2.24
4741 5110 4.455877 CAGGGTGGTCTTCAGTAATTTGTC 59.544 45.833 0.00 0.00 0.00 3.18
4744 5113 6.215636 AGGGTGGTCTTCAGTAATTTGTCTAT 59.784 38.462 0.00 0.00 0.00 1.98
4745 5114 6.539103 GGGTGGTCTTCAGTAATTTGTCTATC 59.461 42.308 0.00 0.00 0.00 2.08
4746 5115 6.539103 GGTGGTCTTCAGTAATTTGTCTATCC 59.461 42.308 0.00 0.00 0.00 2.59
4747 5116 6.539103 GTGGTCTTCAGTAATTTGTCTATCCC 59.461 42.308 0.00 0.00 0.00 3.85
4748 5117 6.056236 GGTCTTCAGTAATTTGTCTATCCCC 58.944 44.000 0.00 0.00 0.00 4.81
4749 5118 6.126739 GGTCTTCAGTAATTTGTCTATCCCCT 60.127 42.308 0.00 0.00 0.00 4.79
4750 5119 6.763610 GTCTTCAGTAATTTGTCTATCCCCTG 59.236 42.308 0.00 0.00 0.00 4.45
4751 5120 5.036117 TCAGTAATTTGTCTATCCCCTGC 57.964 43.478 0.00 0.00 0.00 4.85
4752 5121 4.721776 TCAGTAATTTGTCTATCCCCTGCT 59.278 41.667 0.00 0.00 0.00 4.24
4753 5122 4.818546 CAGTAATTTGTCTATCCCCTGCTG 59.181 45.833 0.00 0.00 0.00 4.41
4754 5123 3.303351 AATTTGTCTATCCCCTGCTGG 57.697 47.619 1.89 1.89 0.00 4.85
4755 5124 0.255890 TTTGTCTATCCCCTGCTGGC 59.744 55.000 3.63 0.00 0.00 4.85
4774 5143 2.427506 GCTACCAGCTGCTGTAAACTT 58.572 47.619 26.41 7.46 38.45 2.66
4775 5144 2.416893 GCTACCAGCTGCTGTAAACTTC 59.583 50.000 26.41 6.77 38.45 3.01
4776 5145 2.638480 ACCAGCTGCTGTAAACTTCA 57.362 45.000 26.41 0.00 0.00 3.02
4777 5146 3.146104 ACCAGCTGCTGTAAACTTCAT 57.854 42.857 26.41 0.00 0.00 2.57
4779 5148 2.421424 CCAGCTGCTGTAAACTTCATCC 59.579 50.000 26.41 0.00 0.00 3.51
4780 5149 2.094894 CAGCTGCTGTAAACTTCATCCG 59.905 50.000 21.21 0.00 0.00 4.18
4782 5151 3.056107 AGCTGCTGTAAACTTCATCCGTA 60.056 43.478 0.00 0.00 0.00 4.02
4783 5152 3.307242 GCTGCTGTAAACTTCATCCGTAG 59.693 47.826 0.00 0.00 0.00 3.51
4784 5153 4.495422 CTGCTGTAAACTTCATCCGTAGT 58.505 43.478 0.00 0.00 0.00 2.73
4785 5154 4.890088 TGCTGTAAACTTCATCCGTAGTT 58.110 39.130 0.00 0.00 34.54 2.24
4786 5155 6.028146 TGCTGTAAACTTCATCCGTAGTTA 57.972 37.500 0.00 0.00 32.16 2.24
4788 5157 5.865552 GCTGTAAACTTCATCCGTAGTTACA 59.134 40.000 0.00 0.00 32.16 2.41
4789 5158 6.366877 GCTGTAAACTTCATCCGTAGTTACAA 59.633 38.462 0.00 0.00 32.16 2.41
4835 5206 4.932789 GGCTTATCAGGCGACACA 57.067 55.556 0.00 0.00 35.53 3.72
4836 5207 2.384203 GGCTTATCAGGCGACACAC 58.616 57.895 0.00 0.00 35.53 3.82
4837 5208 0.108138 GGCTTATCAGGCGACACACT 60.108 55.000 0.00 0.00 35.53 3.55
4838 5209 1.002366 GCTTATCAGGCGACACACTG 58.998 55.000 0.00 0.00 36.07 3.66
4839 5210 1.002366 CTTATCAGGCGACACACTGC 58.998 55.000 0.00 0.00 34.76 4.40
4840 5211 0.608130 TTATCAGGCGACACACTGCT 59.392 50.000 0.00 0.00 34.76 4.24
4841 5212 0.108662 TATCAGGCGACACACTGCTG 60.109 55.000 0.00 0.00 34.76 4.41
4842 5213 1.820010 ATCAGGCGACACACTGCTGA 61.820 55.000 0.00 0.00 34.76 4.26
4843 5214 1.375140 CAGGCGACACACTGCTGAT 60.375 57.895 0.00 0.00 0.00 2.90
4852 5223 5.622233 GCGACACACTGCTGATGGATATATA 60.622 44.000 0.00 0.00 0.00 0.86
4862 5233 8.938801 TGCTGATGGATATATAAATTTGTGGT 57.061 30.769 0.00 0.00 0.00 4.16
4869 5240 8.832521 TGGATATATAAATTTGTGGTTGACGTC 58.167 33.333 9.11 9.11 0.00 4.34
4883 5254 5.009710 TGGTTGACGTCATCTATGGTCTATC 59.990 44.000 20.80 0.59 0.00 2.08
4885 5256 4.386711 TGACGTCATCTATGGTCTATCGT 58.613 43.478 15.76 0.00 0.00 3.73
4886 5257 4.451435 TGACGTCATCTATGGTCTATCGTC 59.549 45.833 15.76 0.00 43.10 4.20
4889 5260 5.531659 ACGTCATCTATGGTCTATCGTCTTT 59.468 40.000 0.00 0.00 0.00 2.52
4890 5261 6.081049 CGTCATCTATGGTCTATCGTCTTTC 58.919 44.000 0.00 0.00 0.00 2.62
4891 5262 6.072948 CGTCATCTATGGTCTATCGTCTTTCT 60.073 42.308 0.00 0.00 0.00 2.52
4892 5263 7.520776 CGTCATCTATGGTCTATCGTCTTTCTT 60.521 40.741 0.00 0.00 0.00 2.52
4893 5264 8.138712 GTCATCTATGGTCTATCGTCTTTCTTT 58.861 37.037 0.00 0.00 0.00 2.52
4894 5265 8.696374 TCATCTATGGTCTATCGTCTTTCTTTT 58.304 33.333 0.00 0.00 0.00 2.27
4895 5266 9.967346 CATCTATGGTCTATCGTCTTTCTTTTA 57.033 33.333 0.00 0.00 0.00 1.52
4953 5324 9.638300 GAGCATTTAGATCACTAATTGTTTACG 57.362 33.333 0.00 0.00 39.80 3.18
4954 5325 8.612619 AGCATTTAGATCACTAATTGTTTACGG 58.387 33.333 0.00 0.00 39.80 4.02
4955 5326 8.609176 GCATTTAGATCACTAATTGTTTACGGA 58.391 33.333 0.00 0.00 39.80 4.69
4957 5328 8.712285 TTTAGATCACTAATTGTTTACGGAGG 57.288 34.615 0.00 0.00 38.23 4.30
4958 5329 5.671493 AGATCACTAATTGTTTACGGAGGG 58.329 41.667 0.00 0.00 0.00 4.30
4959 5330 5.424252 AGATCACTAATTGTTTACGGAGGGA 59.576 40.000 0.00 0.00 0.00 4.20
4960 5331 5.080969 TCACTAATTGTTTACGGAGGGAG 57.919 43.478 0.00 0.00 0.00 4.30
4961 5332 4.529377 TCACTAATTGTTTACGGAGGGAGT 59.471 41.667 0.00 0.00 0.00 3.85
4962 5333 5.716228 TCACTAATTGTTTACGGAGGGAGTA 59.284 40.000 0.00 0.00 0.00 2.59
4963 5334 5.809051 CACTAATTGTTTACGGAGGGAGTAC 59.191 44.000 0.00 0.00 0.00 2.73
4964 5335 4.895668 AATTGTTTACGGAGGGAGTACA 57.104 40.909 0.00 0.00 0.00 2.90
4965 5336 3.947910 TTGTTTACGGAGGGAGTACAG 57.052 47.619 0.00 0.00 0.00 2.74
4971 5495 0.463295 CGGAGGGAGTACAGCGTAGA 60.463 60.000 0.00 0.00 0.00 2.59
4972 5496 1.023502 GGAGGGAGTACAGCGTAGAC 58.976 60.000 0.00 0.00 0.00 2.59
4987 5511 3.418094 CGTAGACAACTCTCACTAAGCG 58.582 50.000 0.00 0.00 0.00 4.68
4990 5514 2.094957 AGACAACTCTCACTAAGCGCTC 60.095 50.000 12.06 0.00 0.00 5.03
4993 5517 0.814457 ACTCTCACTAAGCGCTCAGG 59.186 55.000 12.06 6.52 0.00 3.86
5002 5976 0.975040 AAGCGCTCAGGAGAGTCCAT 60.975 55.000 12.06 0.00 44.00 3.41
5004 5978 1.440893 CGCTCAGGAGAGTCCATGG 59.559 63.158 4.97 4.97 44.00 3.66
5007 5981 2.039070 GCTCAGGAGAGTCCATGGGAT 61.039 57.143 13.02 0.00 44.00 3.85
5020 5994 2.359850 GGGATGTGCTGCCGTGAA 60.360 61.111 0.00 0.00 0.00 3.18
5028 6002 1.063174 GTGCTGCCGTGAATTCAGATC 59.937 52.381 8.80 1.20 0.00 2.75
5030 6004 2.013563 GCTGCCGTGAATTCAGATCCA 61.014 52.381 8.80 3.37 0.00 3.41
5039 6013 6.349611 CCGTGAATTCAGATCCACAGATTTTT 60.350 38.462 8.80 0.00 30.90 1.94
5040 6014 7.148255 CCGTGAATTCAGATCCACAGATTTTTA 60.148 37.037 8.80 0.00 30.90 1.52
5041 6015 8.400947 CGTGAATTCAGATCCACAGATTTTTAT 58.599 33.333 8.80 0.00 30.90 1.40
5048 6022 9.519191 TCAGATCCACAGATTTTTATTTCTTCA 57.481 29.630 0.00 0.00 30.90 3.02
5051 6025 9.578439 GATCCACAGATTTTTATTTCTTCAAGG 57.422 33.333 0.00 0.00 30.90 3.61
5052 6026 7.378181 TCCACAGATTTTTATTTCTTCAAGGC 58.622 34.615 0.00 0.00 0.00 4.35
5053 6027 6.591448 CCACAGATTTTTATTTCTTCAAGGCC 59.409 38.462 0.00 0.00 0.00 5.19
5054 6028 6.591448 CACAGATTTTTATTTCTTCAAGGCCC 59.409 38.462 0.00 0.00 0.00 5.80
5055 6029 6.498303 ACAGATTTTTATTTCTTCAAGGCCCT 59.502 34.615 0.00 0.00 0.00 5.19
5056 6030 7.016563 ACAGATTTTTATTTCTTCAAGGCCCTT 59.983 33.333 0.00 0.00 0.00 3.95
5057 6031 7.879677 CAGATTTTTATTTCTTCAAGGCCCTTT 59.120 33.333 0.00 0.00 0.00 3.11
5058 6032 8.439971 AGATTTTTATTTCTTCAAGGCCCTTTT 58.560 29.630 0.00 0.00 0.00 2.27
5059 6033 8.621532 ATTTTTATTTCTTCAAGGCCCTTTTC 57.378 30.769 0.00 0.00 0.00 2.29
5060 6034 6.994421 TTTATTTCTTCAAGGCCCTTTTCT 57.006 33.333 0.00 0.00 0.00 2.52
5061 6035 4.879197 ATTTCTTCAAGGCCCTTTTCTG 57.121 40.909 0.00 0.00 0.00 3.02
5062 6036 1.620822 TCTTCAAGGCCCTTTTCTGC 58.379 50.000 0.00 0.00 0.00 4.26
5063 6037 1.145738 TCTTCAAGGCCCTTTTCTGCT 59.854 47.619 0.00 0.00 0.00 4.24
5064 6038 1.966354 CTTCAAGGCCCTTTTCTGCTT 59.034 47.619 0.00 0.00 0.00 3.91
5065 6039 2.086610 TCAAGGCCCTTTTCTGCTTT 57.913 45.000 0.00 0.00 0.00 3.51
5066 6040 2.397597 TCAAGGCCCTTTTCTGCTTTT 58.602 42.857 0.00 0.00 0.00 2.27
5067 6041 2.771372 TCAAGGCCCTTTTCTGCTTTTT 59.229 40.909 0.00 0.00 0.00 1.94
5149 6130 8.237811 TCCAATAATATCTTCCTTTCTTTGCC 57.762 34.615 0.00 0.00 0.00 4.52
5150 6131 8.061304 TCCAATAATATCTTCCTTTCTTTGCCT 58.939 33.333 0.00 0.00 0.00 4.75
5151 6132 9.354673 CCAATAATATCTTCCTTTCTTTGCCTA 57.645 33.333 0.00 0.00 0.00 3.93
5199 6180 9.749340 ATATACTTATAAAAGGTATGGGTTGGC 57.251 33.333 6.25 0.00 37.01 4.52
5200 6181 5.833340 ACTTATAAAAGGTATGGGTTGGCA 58.167 37.500 0.00 0.00 37.01 4.92
5201 6182 6.257586 ACTTATAAAAGGTATGGGTTGGCAA 58.742 36.000 0.00 0.00 37.01 4.52
5202 6183 6.900743 ACTTATAAAAGGTATGGGTTGGCAAT 59.099 34.615 1.92 0.00 37.01 3.56
5203 6184 3.979101 AAAAGGTATGGGTTGGCAATG 57.021 42.857 1.92 0.00 0.00 2.82
5204 6185 2.917713 AAGGTATGGGTTGGCAATGA 57.082 45.000 1.92 0.00 0.00 2.57
5205 6186 3.403228 AAGGTATGGGTTGGCAATGAT 57.597 42.857 1.92 0.00 0.00 2.45
5206 6187 3.403228 AGGTATGGGTTGGCAATGATT 57.597 42.857 1.92 0.00 0.00 2.57
5207 6188 3.299503 AGGTATGGGTTGGCAATGATTC 58.700 45.455 1.92 0.00 0.00 2.52
5208 6189 3.030291 GGTATGGGTTGGCAATGATTCA 58.970 45.455 1.92 0.00 0.00 2.57
5209 6190 3.181476 GGTATGGGTTGGCAATGATTCAC 60.181 47.826 1.92 0.00 0.00 3.18
5210 6191 2.307496 TGGGTTGGCAATGATTCACT 57.693 45.000 1.92 0.00 0.00 3.41
5211 6192 2.170166 TGGGTTGGCAATGATTCACTC 58.830 47.619 1.92 0.00 0.00 3.51
5212 6193 2.225091 TGGGTTGGCAATGATTCACTCT 60.225 45.455 1.92 0.00 0.00 3.24
5213 6194 2.424956 GGGTTGGCAATGATTCACTCTC 59.575 50.000 1.92 0.00 0.00 3.20
5214 6195 2.424956 GGTTGGCAATGATTCACTCTCC 59.575 50.000 1.92 0.00 0.00 3.71
5215 6196 2.424956 GTTGGCAATGATTCACTCTCCC 59.575 50.000 1.92 0.00 0.00 4.30
5216 6197 1.634973 TGGCAATGATTCACTCTCCCA 59.365 47.619 0.00 0.00 0.00 4.37
5217 6198 2.242965 TGGCAATGATTCACTCTCCCAT 59.757 45.455 0.00 0.00 0.00 4.00
5218 6199 2.883386 GGCAATGATTCACTCTCCCATC 59.117 50.000 0.00 0.00 0.00 3.51
5219 6200 3.548770 GCAATGATTCACTCTCCCATCA 58.451 45.455 0.00 0.00 0.00 3.07
5220 6201 3.949754 GCAATGATTCACTCTCCCATCAA 59.050 43.478 0.00 0.00 0.00 2.57
5221 6202 4.583489 GCAATGATTCACTCTCCCATCAAT 59.417 41.667 0.00 0.00 0.00 2.57
5222 6203 5.068723 GCAATGATTCACTCTCCCATCAATT 59.931 40.000 0.00 0.00 0.00 2.32
5223 6204 6.406624 GCAATGATTCACTCTCCCATCAATTT 60.407 38.462 0.00 0.00 0.00 1.82
5224 6205 7.553334 CAATGATTCACTCTCCCATCAATTTT 58.447 34.615 0.00 0.00 0.00 1.82
5225 6206 6.764308 TGATTCACTCTCCCATCAATTTTC 57.236 37.500 0.00 0.00 0.00 2.29
5226 6207 6.487828 TGATTCACTCTCCCATCAATTTTCT 58.512 36.000 0.00 0.00 0.00 2.52
5227 6208 6.950041 TGATTCACTCTCCCATCAATTTTCTT 59.050 34.615 0.00 0.00 0.00 2.52
5228 6209 6.824305 TTCACTCTCCCATCAATTTTCTTC 57.176 37.500 0.00 0.00 0.00 2.87
5229 6210 6.131972 TCACTCTCCCATCAATTTTCTTCT 57.868 37.500 0.00 0.00 0.00 2.85
5230 6211 6.546484 TCACTCTCCCATCAATTTTCTTCTT 58.454 36.000 0.00 0.00 0.00 2.52
5231 6212 7.006509 TCACTCTCCCATCAATTTTCTTCTTT 58.993 34.615 0.00 0.00 0.00 2.52
5232 6213 8.163408 TCACTCTCCCATCAATTTTCTTCTTTA 58.837 33.333 0.00 0.00 0.00 1.85
5233 6214 8.239998 CACTCTCCCATCAATTTTCTTCTTTAC 58.760 37.037 0.00 0.00 0.00 2.01
5234 6215 7.944554 ACTCTCCCATCAATTTTCTTCTTTACA 59.055 33.333 0.00 0.00 0.00 2.41
5235 6216 8.884124 TCTCCCATCAATTTTCTTCTTTACAT 57.116 30.769 0.00 0.00 0.00 2.29
5236 6217 8.742777 TCTCCCATCAATTTTCTTCTTTACATG 58.257 33.333 0.00 0.00 0.00 3.21
5237 6218 8.421249 TCCCATCAATTTTCTTCTTTACATGT 57.579 30.769 2.69 2.69 0.00 3.21
5238 6219 9.527157 TCCCATCAATTTTCTTCTTTACATGTA 57.473 29.630 0.08 0.08 0.00 2.29
5250 6231 9.665719 TCTTCTTTACATGTAACATATGCAAGA 57.334 29.630 17.85 12.08 31.45 3.02
5251 6232 9.708222 CTTCTTTACATGTAACATATGCAAGAC 57.292 33.333 17.85 0.00 32.33 3.01
5252 6233 9.448438 TTCTTTACATGTAACATATGCAAGACT 57.552 29.630 17.85 0.00 32.33 3.24
5318 6299 0.961753 GGACCAGTCCTTGCAAAAGG 59.038 55.000 9.67 0.00 46.16 3.11
5319 6300 0.315251 GACCAGTCCTTGCAAAAGGC 59.685 55.000 0.00 0.00 45.13 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.291465 TGGCACGGATGATACTACGTAC 59.709 50.000 0.00 0.00 37.85 3.67
1 2 2.574450 TGGCACGGATGATACTACGTA 58.426 47.619 0.00 0.00 37.85 3.57
2 3 1.395635 TGGCACGGATGATACTACGT 58.604 50.000 0.00 0.00 40.60 3.57
3 4 2.229062 AGATGGCACGGATGATACTACG 59.771 50.000 0.00 0.00 0.00 3.51
4 5 3.579709 CAGATGGCACGGATGATACTAC 58.420 50.000 0.00 0.00 0.00 2.73
5 6 2.562738 CCAGATGGCACGGATGATACTA 59.437 50.000 0.00 0.00 0.00 1.82
6 7 1.345741 CCAGATGGCACGGATGATACT 59.654 52.381 0.00 0.00 0.00 2.12
7 8 1.070758 ACCAGATGGCACGGATGATAC 59.929 52.381 6.45 0.00 39.32 2.24
8 9 1.070601 CACCAGATGGCACGGATGATA 59.929 52.381 6.45 0.00 39.32 2.15
57 58 1.021390 CAACGCCCGATTTGAGCTCT 61.021 55.000 16.19 0.00 0.00 4.09
73 74 1.599419 CCAGCACGCAACCTAAACAAC 60.599 52.381 0.00 0.00 0.00 3.32
76 77 0.040425 CACCAGCACGCAACCTAAAC 60.040 55.000 0.00 0.00 0.00 2.01
78 79 1.599518 CCACCAGCACGCAACCTAA 60.600 57.895 0.00 0.00 0.00 2.69
84 85 4.497984 AACCACCACCAGCACGCA 62.498 61.111 0.00 0.00 0.00 5.24
91 92 1.323412 CAAATTCCGAACCACCACCA 58.677 50.000 0.00 0.00 0.00 4.17
102 103 2.338577 AGGAGATGAGCCAAATTCCG 57.661 50.000 0.00 0.00 0.00 4.30
158 174 1.732405 GCTAAAATGTGCCGGCTTGAC 60.732 52.381 29.70 18.50 0.00 3.18
175 191 5.193099 AGCAGAGGGAAAATTTAAGGCTA 57.807 39.130 0.00 0.00 0.00 3.93
187 203 0.253044 CCAATCGGAAGCAGAGGGAA 59.747 55.000 0.00 0.00 0.00 3.97
212 228 4.993029 ACCCAAAAGAAAATCGAACACA 57.007 36.364 0.00 0.00 0.00 3.72
214 230 5.105310 TGGAAACCCAAAAGAAAATCGAACA 60.105 36.000 0.00 0.00 0.00 3.18
218 234 5.537188 TGATGGAAACCCAAAAGAAAATCG 58.463 37.500 0.00 0.00 37.24 3.34
224 240 8.101309 TCTAGATATGATGGAAACCCAAAAGA 57.899 34.615 0.00 0.00 37.24 2.52
231 247 7.301054 CGCAAATTCTAGATATGATGGAAACC 58.699 38.462 0.00 0.00 0.00 3.27
232 248 7.173218 TCCGCAAATTCTAGATATGATGGAAAC 59.827 37.037 0.00 0.00 0.00 2.78
240 256 5.269459 CGGTTCCGCAAATTCTAGATATG 57.731 43.478 0.00 0.00 0.00 1.78
255 271 2.415697 AAGTGAAAATTGCGGTTCCG 57.584 45.000 6.90 6.90 0.00 4.30
256 272 5.116069 TCTAAAGTGAAAATTGCGGTTCC 57.884 39.130 0.00 0.00 0.00 3.62
257 273 6.861055 TGATTCTAAAGTGAAAATTGCGGTTC 59.139 34.615 0.00 0.00 0.00 3.62
258 274 6.640907 GTGATTCTAAAGTGAAAATTGCGGTT 59.359 34.615 0.00 0.00 0.00 4.44
259 275 6.149633 GTGATTCTAAAGTGAAAATTGCGGT 58.850 36.000 0.00 0.00 0.00 5.68
260 276 5.572896 GGTGATTCTAAAGTGAAAATTGCGG 59.427 40.000 0.00 0.00 0.00 5.69
261 277 5.572896 GGGTGATTCTAAAGTGAAAATTGCG 59.427 40.000 0.00 0.00 0.00 4.85
262 278 5.869344 GGGGTGATTCTAAAGTGAAAATTGC 59.131 40.000 0.00 0.00 0.00 3.56
263 279 7.232118 AGGGGTGATTCTAAAGTGAAAATTG 57.768 36.000 0.00 0.00 0.00 2.32
264 280 7.309194 CGAAGGGGTGATTCTAAAGTGAAAATT 60.309 37.037 0.00 0.00 0.00 1.82
265 281 6.151144 CGAAGGGGTGATTCTAAAGTGAAAAT 59.849 38.462 0.00 0.00 0.00 1.82
266 282 5.472137 CGAAGGGGTGATTCTAAAGTGAAAA 59.528 40.000 0.00 0.00 0.00 2.29
267 283 5.001232 CGAAGGGGTGATTCTAAAGTGAAA 58.999 41.667 0.00 0.00 0.00 2.69
268 284 4.285003 TCGAAGGGGTGATTCTAAAGTGAA 59.715 41.667 0.00 0.00 0.00 3.18
269 285 3.835978 TCGAAGGGGTGATTCTAAAGTGA 59.164 43.478 0.00 0.00 0.00 3.41
270 286 4.202245 TCGAAGGGGTGATTCTAAAGTG 57.798 45.455 0.00 0.00 0.00 3.16
271 287 5.429130 GAATCGAAGGGGTGATTCTAAAGT 58.571 41.667 7.50 0.00 44.44 2.66
272 288 4.508124 CGAATCGAAGGGGTGATTCTAAAG 59.492 45.833 0.00 0.00 45.23 1.85
273 289 4.081309 ACGAATCGAAGGGGTGATTCTAAA 60.081 41.667 10.55 0.00 45.23 1.85
274 290 3.449737 ACGAATCGAAGGGGTGATTCTAA 59.550 43.478 10.55 0.00 45.23 2.10
275 291 3.028850 ACGAATCGAAGGGGTGATTCTA 58.971 45.455 10.55 0.00 45.23 2.10
276 292 1.831736 ACGAATCGAAGGGGTGATTCT 59.168 47.619 10.55 0.00 45.23 2.40
277 293 2.311124 ACGAATCGAAGGGGTGATTC 57.689 50.000 10.55 5.16 44.41 2.52
278 294 2.236395 AGAACGAATCGAAGGGGTGATT 59.764 45.455 10.55 0.00 37.52 2.57
279 295 1.831736 AGAACGAATCGAAGGGGTGAT 59.168 47.619 10.55 0.00 0.00 3.06
280 296 1.263356 AGAACGAATCGAAGGGGTGA 58.737 50.000 10.55 0.00 0.00 4.02
281 297 2.953466 TAGAACGAATCGAAGGGGTG 57.047 50.000 10.55 0.00 0.00 4.61
282 298 3.705072 AGAATAGAACGAATCGAAGGGGT 59.295 43.478 10.55 0.00 0.00 4.95
283 299 4.323553 AGAATAGAACGAATCGAAGGGG 57.676 45.455 10.55 0.00 0.00 4.79
284 300 5.460419 CAGAAGAATAGAACGAATCGAAGGG 59.540 44.000 10.55 0.00 0.00 3.95
285 301 6.037098 ACAGAAGAATAGAACGAATCGAAGG 58.963 40.000 10.55 0.00 0.00 3.46
286 302 6.197468 GGACAGAAGAATAGAACGAATCGAAG 59.803 42.308 10.55 0.00 0.00 3.79
287 303 6.034591 GGACAGAAGAATAGAACGAATCGAA 58.965 40.000 10.55 0.00 0.00 3.71
288 304 5.357314 AGGACAGAAGAATAGAACGAATCGA 59.643 40.000 10.55 0.00 0.00 3.59
289 305 5.583495 AGGACAGAAGAATAGAACGAATCG 58.417 41.667 0.00 0.00 0.00 3.34
290 306 7.545965 TGAAAGGACAGAAGAATAGAACGAATC 59.454 37.037 0.00 0.00 0.00 2.52
291 307 7.386851 TGAAAGGACAGAAGAATAGAACGAAT 58.613 34.615 0.00 0.00 0.00 3.34
292 308 6.755206 TGAAAGGACAGAAGAATAGAACGAA 58.245 36.000 0.00 0.00 0.00 3.85
293 309 6.015350 ACTGAAAGGACAGAAGAATAGAACGA 60.015 38.462 0.00 0.00 40.63 3.85
294 310 6.159988 ACTGAAAGGACAGAAGAATAGAACG 58.840 40.000 0.00 0.00 40.63 3.95
295 311 7.971183 AACTGAAAGGACAGAAGAATAGAAC 57.029 36.000 0.00 0.00 40.63 3.01
300 316 8.924511 TCAAATAACTGAAAGGACAGAAGAAT 57.075 30.769 0.00 0.00 40.63 2.40
301 317 8.924511 ATCAAATAACTGAAAGGACAGAAGAA 57.075 30.769 0.00 0.00 40.63 2.52
302 318 8.924511 AATCAAATAACTGAAAGGACAGAAGA 57.075 30.769 0.00 0.00 40.63 2.87
303 319 9.403110 CAAATCAAATAACTGAAAGGACAGAAG 57.597 33.333 0.00 0.00 40.63 2.85
304 320 8.912988 ACAAATCAAATAACTGAAAGGACAGAA 58.087 29.630 0.00 0.00 40.63 3.02
305 321 8.463930 ACAAATCAAATAACTGAAAGGACAGA 57.536 30.769 0.00 0.00 40.63 3.41
306 322 9.185192 GAACAAATCAAATAACTGAAAGGACAG 57.815 33.333 0.00 0.00 42.78 3.51
307 323 7.860373 CGAACAAATCAAATAACTGAAAGGACA 59.140 33.333 0.00 0.00 39.30 4.02
308 324 7.326063 CCGAACAAATCAAATAACTGAAAGGAC 59.674 37.037 0.00 0.00 39.30 3.85
309 325 7.013846 ACCGAACAAATCAAATAACTGAAAGGA 59.986 33.333 0.00 0.00 39.30 3.36
310 326 7.114811 CACCGAACAAATCAAATAACTGAAAGG 59.885 37.037 0.00 0.00 39.30 3.11
319 335 8.788806 ACTCATTTACACCGAACAAATCAAATA 58.211 29.630 0.00 0.00 0.00 1.40
323 339 6.261158 TCAACTCATTTACACCGAACAAATCA 59.739 34.615 0.00 0.00 0.00 2.57
330 346 6.567701 GCTCAATTCAACTCATTTACACCGAA 60.568 38.462 0.00 0.00 0.00 4.30
333 349 6.072508 TCAGCTCAATTCAACTCATTTACACC 60.073 38.462 0.00 0.00 0.00 4.16
334 350 6.902341 TCAGCTCAATTCAACTCATTTACAC 58.098 36.000 0.00 0.00 0.00 2.90
335 351 7.509141 TTCAGCTCAATTCAACTCATTTACA 57.491 32.000 0.00 0.00 0.00 2.41
336 352 8.976986 AATTCAGCTCAATTCAACTCATTTAC 57.023 30.769 0.00 0.00 0.00 2.01
340 356 6.209986 TGGAAATTCAGCTCAATTCAACTCAT 59.790 34.615 0.00 0.00 0.00 2.90
347 363 3.194116 TGCCTGGAAATTCAGCTCAATTC 59.806 43.478 0.00 0.00 33.64 2.17
348 364 3.056322 GTGCCTGGAAATTCAGCTCAATT 60.056 43.478 0.00 0.00 33.64 2.32
373 389 7.598869 GGAAGTTACCAGATCAAATCCAAAAAC 59.401 37.037 0.00 0.00 0.00 2.43
413 429 3.425492 GCTTCTTGCTTTCAGATCGAACC 60.425 47.826 0.00 0.00 38.95 3.62
445 461 2.280524 CGAGTTGTGCGTGGGGAA 60.281 61.111 0.00 0.00 0.00 3.97
446 462 4.980805 GCGAGTTGTGCGTGGGGA 62.981 66.667 0.00 0.00 0.00 4.81
451 467 3.022287 CCTTTGCGAGTTGTGCGT 58.978 55.556 0.00 0.00 34.24 5.24
452 468 2.427410 GCCTTTGCGAGTTGTGCG 60.427 61.111 0.00 0.00 34.24 5.34
453 469 1.370900 CAGCCTTTGCGAGTTGTGC 60.371 57.895 0.00 0.00 44.33 4.57
456 473 0.386478 GCTTCAGCCTTTGCGAGTTG 60.386 55.000 0.00 0.00 44.33 3.16
468 485 1.616159 TAACCCAACAAGGCTTCAGC 58.384 50.000 0.00 0.00 41.14 4.26
492 509 2.614057 CACTGGATTTTAGTGGCCGATC 59.386 50.000 0.00 0.00 41.36 3.69
535 552 6.016024 CAGAACATCAAAAGAACAAGGGATGA 60.016 38.462 0.00 0.00 36.52 2.92
621 638 9.695526 TGGATTTAAATTCTCAGTCAAATTGTG 57.304 29.630 7.98 0.00 0.00 3.33
622 639 9.918630 CTGGATTTAAATTCTCAGTCAAATTGT 57.081 29.630 7.98 0.00 0.00 2.71
623 640 9.918630 ACTGGATTTAAATTCTCAGTCAAATTG 57.081 29.630 18.63 0.00 30.74 2.32
624 641 9.918630 CACTGGATTTAAATTCTCAGTCAAATT 57.081 29.630 20.22 5.52 33.80 1.82
625 642 9.300681 TCACTGGATTTAAATTCTCAGTCAAAT 57.699 29.630 20.22 5.98 33.80 2.32
626 643 8.690203 TCACTGGATTTAAATTCTCAGTCAAA 57.310 30.769 20.22 11.91 33.80 2.69
627 644 8.690203 TTCACTGGATTTAAATTCTCAGTCAA 57.310 30.769 20.22 15.37 33.80 3.18
628 645 8.733458 CATTCACTGGATTTAAATTCTCAGTCA 58.267 33.333 20.22 11.84 33.80 3.41
675 692 3.347411 GGGAGACCGAAACATCGAG 57.653 57.895 0.00 0.00 43.64 4.04
691 708 3.616956 TGTCTGCTTGATCTAACTGGG 57.383 47.619 0.00 0.00 0.00 4.45
784 801 2.041216 GCAGAGGGTAAAAAGGGGAAGA 59.959 50.000 0.00 0.00 0.00 2.87
811 828 8.792633 CAACCAAATAAAGTTGAAGGATACTGA 58.207 33.333 0.00 0.00 45.92 3.41
812 829 8.028938 CCAACCAAATAAAGTTGAAGGATACTG 58.971 37.037 4.52 0.00 45.92 2.74
838 883 3.296322 TTTTGTGATGGCCGATCAAAC 57.704 42.857 16.37 8.42 42.96 2.93
871 916 6.201806 CACGAGATGGGATGAAATCTAAAGAC 59.798 42.308 0.00 0.00 44.71 3.01
915 961 5.515008 GGTGAGTTGGGGAATTTCTCTACTT 60.515 44.000 2.00 0.00 0.00 2.24
922 968 2.171003 CAGGGTGAGTTGGGGAATTTC 58.829 52.381 0.00 0.00 0.00 2.17
971 1018 2.293122 CTGCACGAAAGATGGAACCAAA 59.707 45.455 0.00 0.00 0.00 3.28
1286 1363 4.785453 GAACAGCGGCAGGGGGAG 62.785 72.222 1.45 0.00 0.00 4.30
1300 1381 3.441922 GGAGGGAGAAAATGCTGAAGAAC 59.558 47.826 0.00 0.00 0.00 3.01
1363 1471 3.117738 ACCCATGGAGGATTCTGAATGTC 60.118 47.826 15.22 4.40 41.22 3.06
1390 1498 1.308998 CTGCTCTTTCAACCCAACGT 58.691 50.000 0.00 0.00 0.00 3.99
1391 1499 0.040067 GCTGCTCTTTCAACCCAACG 60.040 55.000 0.00 0.00 0.00 4.10
1466 1576 0.446222 AATCGGATCAAACGCAACCG 59.554 50.000 0.00 0.00 44.09 4.44
1521 1633 2.516923 GCTACGGATATCGGTCATTCG 58.483 52.381 18.18 6.48 44.45 3.34
1537 1649 1.653151 GGAATCACCAACTCCGCTAC 58.347 55.000 0.00 0.00 38.79 3.58
1556 1668 0.667487 ATCGCATCGCCTACCATTCG 60.667 55.000 0.00 0.00 0.00 3.34
1671 1821 2.629017 AAAAAGCAGGATCACCCCAT 57.371 45.000 0.00 0.00 36.73 4.00
1694 1850 5.765182 ACACTTGACCAGGATAACTTGAAAG 59.235 40.000 0.00 0.00 0.00 2.62
1740 1898 0.779997 AAGAACACCCAGGGCTTCAT 59.220 50.000 4.91 0.00 0.00 2.57
1838 2005 2.295349 AGCCACAAGAGAAAACAGCATG 59.705 45.455 0.00 0.00 46.00 4.06
1874 2041 1.956869 TCTGATTCTCCTGGCCTTCA 58.043 50.000 3.32 0.00 0.00 3.02
1875 2042 3.574354 AATCTGATTCTCCTGGCCTTC 57.426 47.619 3.32 0.00 0.00 3.46
1913 2080 2.046507 CAGTCTGCTGGTGCTCCC 60.047 66.667 1.59 0.00 39.01 4.30
2025 2192 5.066375 CGAACAATCCCAATAATGAAGCAGA 59.934 40.000 0.00 0.00 0.00 4.26
2032 2199 5.516339 GCTTTCACGAACAATCCCAATAATG 59.484 40.000 0.00 0.00 0.00 1.90
2156 2323 6.753107 TTTCTTTCTCGGGCTAAAATTAGG 57.247 37.500 2.61 0.00 0.00 2.69
2222 2389 1.283347 AGCTGTCACCATCACCATCT 58.717 50.000 0.00 0.00 0.00 2.90
2420 2587 7.817418 ATTGGGTACATAAACATACATGACC 57.183 36.000 0.00 0.00 0.00 4.02
2512 2681 7.781056 AGGGCAAAAGGTAATGTAATTATGTG 58.219 34.615 0.00 0.00 41.51 3.21
2651 2828 3.731652 TGATGGGAAAAGTGTTTGCAG 57.268 42.857 0.00 0.00 36.83 4.41
3015 3194 3.175929 GTTGTTGTCGTTGTTTCCCTTG 58.824 45.455 0.00 0.00 0.00 3.61
3081 3260 0.336737 AGATCGACCCTTCACTCCCT 59.663 55.000 0.00 0.00 0.00 4.20
3096 3275 1.615392 ACTGCAAAGTTTGGCCAGATC 59.385 47.619 22.46 0.11 0.00 2.75
3255 3434 9.739276 AATCCTAAGTGAAATGATTGACAGTTA 57.261 29.630 10.30 10.30 36.92 2.24
3262 3441 9.393512 AGAGAAGAATCCTAAGTGAAATGATTG 57.606 33.333 0.00 0.00 0.00 2.67
3263 3442 9.612066 GAGAGAAGAATCCTAAGTGAAATGATT 57.388 33.333 0.00 0.00 0.00 2.57
3274 3456 7.469537 AAAGAAGACGAGAGAAGAATCCTAA 57.530 36.000 0.00 0.00 0.00 2.69
3290 3472 3.125316 CCTATGCACCGTCAAAAGAAGAC 59.875 47.826 0.00 0.00 0.00 3.01
3296 3478 3.950397 AGAATCCTATGCACCGTCAAAA 58.050 40.909 0.00 0.00 0.00 2.44
3300 3482 5.140747 AGATAAGAATCCTATGCACCGTC 57.859 43.478 0.00 0.00 31.98 4.79
3301 3483 5.305644 AGAAGATAAGAATCCTATGCACCGT 59.694 40.000 0.00 0.00 31.98 4.83
3358 3540 3.931578 ACTACTGGAATCTCTGTGCAAC 58.068 45.455 0.00 0.00 37.35 4.17
3361 3543 8.718102 TTTTAATACTACTGGAATCTCTGTGC 57.282 34.615 0.00 0.00 0.00 4.57
3374 3556 8.110860 ACTGCTGTGCAATTTTTAATACTACT 57.889 30.769 0.00 0.00 38.41 2.57
3375 3557 9.274065 GTACTGCTGTGCAATTTTTAATACTAC 57.726 33.333 6.48 0.00 38.41 2.73
3376 3558 9.226606 AGTACTGCTGTGCAATTTTTAATACTA 57.773 29.630 13.86 0.00 38.41 1.82
3432 3614 2.876550 GTGGTACGCTCTTGGTTTTCTT 59.123 45.455 0.00 0.00 35.02 2.52
3474 3656 3.628032 GCCCTGTCTCTATTAAAAGTGCC 59.372 47.826 0.00 0.00 0.00 5.01
3500 3682 1.736126 GCCATATGCTCCATGTGATCG 59.264 52.381 0.00 0.00 35.47 3.69
3530 3712 1.375908 GACAAGGCAGGCATCGTGA 60.376 57.895 0.00 0.00 0.00 4.35
3592 3774 7.386059 TCATGTATAATCAATGAGGCGTACAT 58.614 34.615 0.00 7.22 33.25 2.29
3655 3837 1.068748 CAGACAGAAGCATGTTGTGGC 60.069 52.381 0.00 0.00 32.25 5.01
3741 3923 7.939039 TGCTTCAAAGAAAGAAGGAGATTAAGA 59.061 33.333 0.00 0.00 42.08 2.10
3749 3934 2.887152 GGCTGCTTCAAAGAAAGAAGGA 59.113 45.455 0.00 0.00 42.08 3.36
3765 3950 8.197439 AGATAAAATGGTAATTACTTTGGCTGC 58.803 33.333 15.05 0.00 0.00 5.25
3797 4066 7.244886 TCAGAAATGGAGTTCAACAGAGATA 57.755 36.000 0.00 0.00 0.00 1.98
3798 4067 6.119240 TCAGAAATGGAGTTCAACAGAGAT 57.881 37.500 0.00 0.00 0.00 2.75
3799 4068 5.551305 TCAGAAATGGAGTTCAACAGAGA 57.449 39.130 0.00 0.00 0.00 3.10
3800 4069 6.814506 ATTCAGAAATGGAGTTCAACAGAG 57.185 37.500 0.00 0.00 0.00 3.35
3801 4070 7.000472 AGAATTCAGAAATGGAGTTCAACAGA 59.000 34.615 8.44 0.00 34.53 3.41
3803 4072 8.868522 ATAGAATTCAGAAATGGAGTTCAACA 57.131 30.769 8.44 0.00 34.53 3.33
3890 4197 9.226345 CTACAAAAGCTTCAAGTGTCTAAAAAG 57.774 33.333 0.00 0.00 0.00 2.27
3899 4206 6.377327 TTCCTTCTACAAAAGCTTCAAGTG 57.623 37.500 0.00 0.00 0.00 3.16
3905 4212 8.926092 AAGTATCTTTCCTTCTACAAAAGCTT 57.074 30.769 0.00 0.00 31.55 3.74
3906 4213 9.660180 CTAAGTATCTTTCCTTCTACAAAAGCT 57.340 33.333 0.00 0.00 31.55 3.74
3931 4238 7.468768 GCCAACTGTTTTCTAAAGCTAAACTCT 60.469 37.037 9.75 0.00 33.92 3.24
3937 4244 3.058501 GCGCCAACTGTTTTCTAAAGCTA 60.059 43.478 0.00 0.00 0.00 3.32
3943 4250 1.681538 TTGGCGCCAACTGTTTTCTA 58.318 45.000 37.30 12.35 0.00 2.10
4008 4316 3.982058 GTGACACGGTTTCAACAACAAAA 59.018 39.130 0.00 0.00 0.00 2.44
4010 4318 2.412977 CGTGACACGGTTTCAACAACAA 60.413 45.455 20.26 0.00 38.08 2.83
4012 4320 1.805286 CGTGACACGGTTTCAACAAC 58.195 50.000 20.26 0.00 38.08 3.32
4023 4331 0.667487 ACTGCAGAATCCGTGACACG 60.667 55.000 23.35 21.02 42.11 4.49
4024 4332 1.461127 GAACTGCAGAATCCGTGACAC 59.539 52.381 23.35 0.00 0.00 3.67
4031 4350 2.027745 TCAGGTCAGAACTGCAGAATCC 60.028 50.000 23.35 12.92 35.94 3.01
4040 4359 4.949856 ACAAACAAACATCAGGTCAGAACT 59.050 37.500 0.00 0.00 0.00 3.01
4046 4365 4.520492 AGATGGACAAACAAACATCAGGTC 59.480 41.667 0.00 0.00 41.55 3.85
4094 4413 0.390860 GAGTCAGGTCGCATAGCCAT 59.609 55.000 0.00 0.00 0.00 4.40
4189 4508 1.004277 GATGCAGGGTTTACAGGACCA 59.996 52.381 0.00 0.00 38.98 4.02
4190 4509 1.004277 TGATGCAGGGTTTACAGGACC 59.996 52.381 0.00 0.00 36.41 4.46
4201 4520 2.046988 TGCGTGAGTGATGCAGGG 60.047 61.111 0.00 0.00 41.93 4.45
4215 4534 3.307242 GCAGTTCATTTCTACCTAGTGCG 59.693 47.826 0.00 0.00 0.00 5.34
4218 4537 4.777896 TCAGGCAGTTCATTTCTACCTAGT 59.222 41.667 0.00 0.00 28.65 2.57
4231 4550 1.282930 GAACGTCGGTCAGGCAGTTC 61.283 60.000 5.14 0.00 33.55 3.01
4235 4554 1.006571 GAAGAACGTCGGTCAGGCA 60.007 57.895 13.74 0.00 0.00 4.75
4272 4592 2.361737 GCTTTCAGTCCCCTGGGC 60.362 66.667 7.39 0.00 39.31 5.36
4332 4652 4.838486 GCTCAGGCTCGACGACGG 62.838 72.222 7.55 0.00 40.21 4.79
4375 4696 1.063972 CTGTGGCGGTGTTTGTGTG 59.936 57.895 0.00 0.00 0.00 3.82
4402 4723 2.147436 TTTGCAATCTTTGGTTCGGC 57.853 45.000 0.00 0.00 0.00 5.54
4408 4729 6.101997 GGAGAGGTTAATTTGCAATCTTTGG 58.898 40.000 0.00 0.00 0.00 3.28
4409 4730 6.101997 GGGAGAGGTTAATTTGCAATCTTTG 58.898 40.000 0.00 0.00 0.00 2.77
4410 4731 5.779771 TGGGAGAGGTTAATTTGCAATCTTT 59.220 36.000 0.00 0.00 0.00 2.52
4411 4732 5.332743 TGGGAGAGGTTAATTTGCAATCTT 58.667 37.500 0.00 0.00 0.00 2.40
4412 4733 4.934356 TGGGAGAGGTTAATTTGCAATCT 58.066 39.130 0.00 0.00 0.00 2.40
4413 4734 4.949856 TCTGGGAGAGGTTAATTTGCAATC 59.050 41.667 0.00 0.00 0.00 2.67
4414 4735 4.934356 TCTGGGAGAGGTTAATTTGCAAT 58.066 39.130 0.00 0.00 0.00 3.56
4415 4736 4.380843 TCTGGGAGAGGTTAATTTGCAA 57.619 40.909 0.00 0.00 0.00 4.08
4416 4737 4.272489 CATCTGGGAGAGGTTAATTTGCA 58.728 43.478 0.00 0.00 0.00 4.08
4417 4738 3.067320 GCATCTGGGAGAGGTTAATTTGC 59.933 47.826 0.00 0.00 0.00 3.68
4418 4739 4.272489 TGCATCTGGGAGAGGTTAATTTG 58.728 43.478 0.00 0.00 0.00 2.32
4422 4743 3.523157 TCATTGCATCTGGGAGAGGTTAA 59.477 43.478 0.00 0.00 0.00 2.01
4424 4745 1.918262 TCATTGCATCTGGGAGAGGTT 59.082 47.619 0.00 0.00 0.00 3.50
4426 4747 2.295885 GTTCATTGCATCTGGGAGAGG 58.704 52.381 0.00 0.00 0.00 3.69
4428 4749 3.657398 ATGTTCATTGCATCTGGGAGA 57.343 42.857 0.00 0.00 0.00 3.71
4429 4750 3.181479 CCAATGTTCATTGCATCTGGGAG 60.181 47.826 17.04 0.81 0.00 4.30
4439 4760 1.205417 GGTCAGCCCCAATGTTCATTG 59.795 52.381 15.91 15.91 0.00 2.82
4482 4803 4.547367 ATAACCCGCAGCCGCTCC 62.547 66.667 0.00 0.00 35.30 4.70
4493 4854 0.102300 GCCATGCACGGAAATAACCC 59.898 55.000 1.12 0.00 0.00 4.11
4498 4859 0.322816 ACAGAGCCATGCACGGAAAT 60.323 50.000 1.12 0.00 0.00 2.17
4518 4879 3.250040 GCCAACGCTCTCTTCTGTAAAAA 59.750 43.478 0.00 0.00 0.00 1.94
4519 4880 2.806244 GCCAACGCTCTCTTCTGTAAAA 59.194 45.455 0.00 0.00 0.00 1.52
4524 4885 2.593346 ATAGCCAACGCTCTCTTCTG 57.407 50.000 0.00 0.00 43.95 3.02
4525 4886 3.891977 TGATATAGCCAACGCTCTCTTCT 59.108 43.478 0.00 0.00 43.95 2.85
4526 4887 4.244425 TGATATAGCCAACGCTCTCTTC 57.756 45.455 0.00 0.00 43.95 2.87
4527 4888 4.526262 AGATGATATAGCCAACGCTCTCTT 59.474 41.667 0.00 0.00 43.95 2.85
4560 4923 0.842030 TCAACATGAGGTCAGGGCCT 60.842 55.000 0.00 0.00 42.53 5.19
4598 4961 1.136141 CAGTTTGACACAGCGAGATGC 60.136 52.381 0.00 0.00 46.98 3.91
4600 4963 1.070758 ACCAGTTTGACACAGCGAGAT 59.929 47.619 0.00 0.00 0.00 2.75
4601 4964 0.464036 ACCAGTTTGACACAGCGAGA 59.536 50.000 0.00 0.00 0.00 4.04
4602 4965 0.583438 CACCAGTTTGACACAGCGAG 59.417 55.000 0.00 0.00 0.00 5.03
4603 4966 1.436195 GCACCAGTTTGACACAGCGA 61.436 55.000 0.00 0.00 0.00 4.93
4604 4967 1.009675 GCACCAGTTTGACACAGCG 60.010 57.895 0.00 0.00 0.00 5.18
4605 4968 1.360192 GGCACCAGTTTGACACAGC 59.640 57.895 0.00 0.00 0.00 4.40
4606 4969 1.066002 CTTGGCACCAGTTTGACACAG 59.934 52.381 0.00 0.00 32.78 3.66
4607 4970 1.102154 CTTGGCACCAGTTTGACACA 58.898 50.000 0.00 0.00 32.78 3.72
4608 4971 1.102978 ACTTGGCACCAGTTTGACAC 58.897 50.000 0.00 0.00 32.78 3.67
4609 4972 2.092646 ACTACTTGGCACCAGTTTGACA 60.093 45.455 0.00 0.00 30.33 3.58
4616 4981 0.250467 AGCACACTACTTGGCACCAG 60.250 55.000 0.00 0.00 0.00 4.00
4617 4982 0.250295 GAGCACACTACTTGGCACCA 60.250 55.000 0.00 0.00 0.00 4.17
4624 4989 2.563179 CCTGTACTGGAGCACACTACTT 59.437 50.000 13.30 0.00 0.00 2.24
4628 4993 0.681733 CACCTGTACTGGAGCACACT 59.318 55.000 24.19 0.00 0.00 3.55
4630 4995 1.480212 CCCACCTGTACTGGAGCACA 61.480 60.000 24.19 0.00 0.00 4.57
4673 5041 4.955925 TTATTACCGTCATTTGCCAGTG 57.044 40.909 0.00 0.00 0.00 3.66
4699 5067 7.343357 CACCCTGGTAAATCCATCTTAACTTA 58.657 38.462 0.00 0.00 46.12 2.24
4723 5092 6.352737 GGGGATAGACAAATTACTGAAGACCA 60.353 42.308 0.00 0.00 0.00 4.02
4724 5093 6.056236 GGGGATAGACAAATTACTGAAGACC 58.944 44.000 0.00 0.00 0.00 3.85
4725 5094 6.763610 CAGGGGATAGACAAATTACTGAAGAC 59.236 42.308 0.00 0.00 0.00 3.01
4726 5095 6.632672 GCAGGGGATAGACAAATTACTGAAGA 60.633 42.308 0.00 0.00 0.00 2.87
4731 5100 4.141390 CCAGCAGGGGATAGACAAATTACT 60.141 45.833 0.00 0.00 0.00 2.24
4741 5110 0.764369 TGGTAGCCAGCAGGGGATAG 60.764 60.000 0.00 0.00 37.04 2.08
4744 5113 2.688666 CTGGTAGCCAGCAGGGGA 60.689 66.667 3.18 0.00 45.13 4.81
4752 5121 0.690192 TTTACAGCAGCTGGTAGCCA 59.310 50.000 26.38 0.20 43.77 4.75
4753 5122 1.087501 GTTTACAGCAGCTGGTAGCC 58.912 55.000 26.38 6.49 43.77 3.93
4754 5123 2.100605 AGTTTACAGCAGCTGGTAGC 57.899 50.000 26.38 14.75 42.84 3.58
4755 5124 3.664107 TGAAGTTTACAGCAGCTGGTAG 58.336 45.455 26.38 15.05 35.51 3.18
4774 5143 4.873827 GCTCCAAATTGTAACTACGGATGA 59.126 41.667 0.00 0.00 0.00 2.92
4775 5144 4.634004 TGCTCCAAATTGTAACTACGGATG 59.366 41.667 0.00 0.00 0.00 3.51
4776 5145 4.839121 TGCTCCAAATTGTAACTACGGAT 58.161 39.130 0.00 0.00 0.00 4.18
4777 5146 4.274602 TGCTCCAAATTGTAACTACGGA 57.725 40.909 0.00 0.00 0.00 4.69
4779 5148 4.260212 CGGATGCTCCAAATTGTAACTACG 60.260 45.833 3.57 0.00 35.91 3.51
4780 5149 4.873827 TCGGATGCTCCAAATTGTAACTAC 59.126 41.667 3.57 0.00 35.91 2.73
4782 5151 3.950397 TCGGATGCTCCAAATTGTAACT 58.050 40.909 3.57 0.00 35.91 2.24
4783 5152 4.335315 TCATCGGATGCTCCAAATTGTAAC 59.665 41.667 13.15 0.00 35.91 2.50
4784 5153 4.522114 TCATCGGATGCTCCAAATTGTAA 58.478 39.130 13.15 0.00 35.91 2.41
4785 5154 4.149511 TCATCGGATGCTCCAAATTGTA 57.850 40.909 13.15 0.00 35.91 2.41
4786 5155 3.003394 TCATCGGATGCTCCAAATTGT 57.997 42.857 13.15 0.00 35.91 2.71
4801 5172 2.156542 CCTACGCATGGCATCATCG 58.843 57.895 0.00 4.34 33.44 3.84
4823 5194 1.375140 CAGCAGTGTGTCGCCTGAT 60.375 57.895 6.18 0.00 0.00 2.90
4830 5201 8.783833 ATTTATATATCCATCAGCAGTGTGTC 57.216 34.615 0.00 0.00 0.00 3.67
4831 5202 9.578576 AAATTTATATATCCATCAGCAGTGTGT 57.421 29.630 0.00 0.00 0.00 3.72
4832 5203 9.836076 CAAATTTATATATCCATCAGCAGTGTG 57.164 33.333 0.00 0.00 0.00 3.82
4833 5204 9.578576 ACAAATTTATATATCCATCAGCAGTGT 57.421 29.630 0.00 0.00 0.00 3.55
4834 5205 9.836076 CACAAATTTATATATCCATCAGCAGTG 57.164 33.333 0.00 0.00 0.00 3.66
4835 5206 9.017509 CCACAAATTTATATATCCATCAGCAGT 57.982 33.333 0.00 0.00 0.00 4.40
4836 5207 9.017509 ACCACAAATTTATATATCCATCAGCAG 57.982 33.333 0.00 0.00 0.00 4.24
4837 5208 8.938801 ACCACAAATTTATATATCCATCAGCA 57.061 30.769 0.00 0.00 0.00 4.41
4838 5209 9.630098 CAACCACAAATTTATATATCCATCAGC 57.370 33.333 0.00 0.00 0.00 4.26
4841 5212 9.825972 CGTCAACCACAAATTTATATATCCATC 57.174 33.333 0.00 0.00 0.00 3.51
4842 5213 9.349713 ACGTCAACCACAAATTTATATATCCAT 57.650 29.630 0.00 0.00 0.00 3.41
4843 5214 8.740123 ACGTCAACCACAAATTTATATATCCA 57.260 30.769 0.00 0.00 0.00 3.41
4852 5223 6.349280 CCATAGATGACGTCAACCACAAATTT 60.349 38.462 24.13 0.75 0.00 1.82
4862 5233 4.820173 ACGATAGACCATAGATGACGTCAA 59.180 41.667 24.13 6.61 41.38 3.18
4865 5236 4.643463 AGACGATAGACCATAGATGACGT 58.357 43.478 0.00 0.00 41.38 4.34
4866 5237 5.614923 AAGACGATAGACCATAGATGACG 57.385 43.478 0.00 0.00 41.38 4.35
4869 5240 8.879342 AAAAGAAAGACGATAGACCATAGATG 57.121 34.615 0.00 0.00 41.38 2.90
4927 5298 9.638300 CGTAAACAATTAGTGATCTAAATGCTC 57.362 33.333 0.00 0.00 39.38 4.26
4928 5299 8.612619 CCGTAAACAATTAGTGATCTAAATGCT 58.387 33.333 0.00 0.00 39.38 3.79
4929 5300 8.609176 TCCGTAAACAATTAGTGATCTAAATGC 58.391 33.333 0.00 0.00 39.38 3.56
4931 5302 9.326413 CCTCCGTAAACAATTAGTGATCTAAAT 57.674 33.333 0.00 0.00 39.23 1.40
4932 5303 7.767198 CCCTCCGTAAACAATTAGTGATCTAAA 59.233 37.037 0.00 0.00 39.23 1.85
4939 5310 4.828829 ACTCCCTCCGTAAACAATTAGTG 58.171 43.478 0.00 0.00 0.00 2.74
4940 5311 5.481473 TGTACTCCCTCCGTAAACAATTAGT 59.519 40.000 0.00 0.00 0.00 2.24
4941 5312 5.969423 TGTACTCCCTCCGTAAACAATTAG 58.031 41.667 0.00 0.00 0.00 1.73
4943 5314 4.828829 CTGTACTCCCTCCGTAAACAATT 58.171 43.478 0.00 0.00 0.00 2.32
4944 5315 3.369157 GCTGTACTCCCTCCGTAAACAAT 60.369 47.826 0.00 0.00 0.00 2.71
4945 5316 2.028748 GCTGTACTCCCTCCGTAAACAA 60.029 50.000 0.00 0.00 0.00 2.83
4946 5317 1.547372 GCTGTACTCCCTCCGTAAACA 59.453 52.381 0.00 0.00 0.00 2.83
4947 5318 1.468736 CGCTGTACTCCCTCCGTAAAC 60.469 57.143 0.00 0.00 0.00 2.01
4949 5320 0.322816 ACGCTGTACTCCCTCCGTAA 60.323 55.000 0.00 0.00 0.00 3.18
4950 5321 0.541392 TACGCTGTACTCCCTCCGTA 59.459 55.000 0.00 0.00 0.00 4.02
4951 5322 0.747283 CTACGCTGTACTCCCTCCGT 60.747 60.000 0.00 0.00 0.00 4.69
4952 5323 0.463295 TCTACGCTGTACTCCCTCCG 60.463 60.000 0.00 0.00 0.00 4.63
4953 5324 1.023502 GTCTACGCTGTACTCCCTCC 58.976 60.000 0.00 0.00 0.00 4.30
4954 5325 1.747709 TGTCTACGCTGTACTCCCTC 58.252 55.000 0.00 0.00 0.00 4.30
4955 5326 1.817447 GTTGTCTACGCTGTACTCCCT 59.183 52.381 0.00 0.00 0.00 4.20
4956 5327 1.817447 AGTTGTCTACGCTGTACTCCC 59.183 52.381 0.00 0.00 0.00 4.30
4957 5328 2.748532 AGAGTTGTCTACGCTGTACTCC 59.251 50.000 0.00 0.00 35.41 3.85
4958 5329 3.436015 TGAGAGTTGTCTACGCTGTACTC 59.564 47.826 0.00 0.00 36.99 2.59
4959 5330 3.188873 GTGAGAGTTGTCTACGCTGTACT 59.811 47.826 0.00 0.00 36.99 2.73
4960 5331 3.188873 AGTGAGAGTTGTCTACGCTGTAC 59.811 47.826 0.00 0.00 36.99 2.90
4961 5332 3.409570 AGTGAGAGTTGTCTACGCTGTA 58.590 45.455 0.00 0.00 36.99 2.74
4962 5333 2.231529 AGTGAGAGTTGTCTACGCTGT 58.768 47.619 0.00 0.00 36.99 4.40
4963 5334 2.999507 AGTGAGAGTTGTCTACGCTG 57.000 50.000 0.00 0.00 36.99 5.18
4964 5335 3.119779 GCTTAGTGAGAGTTGTCTACGCT 60.120 47.826 0.00 0.00 39.81 5.07
4965 5336 3.172824 GCTTAGTGAGAGTTGTCTACGC 58.827 50.000 0.00 0.00 30.97 4.42
4971 5495 1.613925 TGAGCGCTTAGTGAGAGTTGT 59.386 47.619 13.26 0.00 0.00 3.32
4972 5496 2.257894 CTGAGCGCTTAGTGAGAGTTG 58.742 52.381 20.34 0.00 0.00 3.16
4987 5511 0.689080 TCCCATGGACTCTCCTGAGC 60.689 60.000 15.22 0.00 43.85 4.26
4990 5514 1.140452 CACATCCCATGGACTCTCCTG 59.860 57.143 15.22 2.19 37.46 3.86
4993 5517 0.835941 AGCACATCCCATGGACTCTC 59.164 55.000 15.22 0.00 32.98 3.20
5002 5976 2.482796 ATTCACGGCAGCACATCCCA 62.483 55.000 0.00 0.00 0.00 4.37
5004 5978 0.099436 GAATTCACGGCAGCACATCC 59.901 55.000 0.00 0.00 0.00 3.51
5007 5981 0.250252 TCTGAATTCACGGCAGCACA 60.250 50.000 3.38 0.00 0.00 4.57
5028 6002 6.591448 GGCCTTGAAGAAATAAAAATCTGTGG 59.409 38.462 0.00 0.00 0.00 4.17
5030 6004 6.498303 AGGGCCTTGAAGAAATAAAAATCTGT 59.502 34.615 0.00 0.00 0.00 3.41
5039 6013 4.220602 GCAGAAAAGGGCCTTGAAGAAATA 59.779 41.667 21.72 0.00 0.00 1.40
5040 6014 3.007290 GCAGAAAAGGGCCTTGAAGAAAT 59.993 43.478 21.72 0.00 0.00 2.17
5041 6015 2.365293 GCAGAAAAGGGCCTTGAAGAAA 59.635 45.455 21.72 0.00 0.00 2.52
5042 6016 1.963515 GCAGAAAAGGGCCTTGAAGAA 59.036 47.619 21.72 0.00 0.00 2.52
5043 6017 1.145738 AGCAGAAAAGGGCCTTGAAGA 59.854 47.619 21.72 0.00 0.00 2.87
5044 6018 1.625511 AGCAGAAAAGGGCCTTGAAG 58.374 50.000 21.72 11.44 0.00 3.02
5045 6019 2.086610 AAGCAGAAAAGGGCCTTGAA 57.913 45.000 21.72 0.00 0.00 2.69
5046 6020 2.086610 AAAGCAGAAAAGGGCCTTGA 57.913 45.000 21.72 0.00 0.00 3.02
5047 6021 2.916702 AAAAGCAGAAAAGGGCCTTG 57.083 45.000 21.72 9.31 0.00 3.61
5070 6044 1.736645 CACCTGTCCCACGCGTAAG 60.737 63.158 13.44 6.36 43.44 2.34
5071 6045 2.340809 CACCTGTCCCACGCGTAA 59.659 61.111 13.44 0.00 0.00 3.18
5072 6046 2.913578 ACACCTGTCCCACGCGTA 60.914 61.111 13.44 0.00 0.00 4.42
5073 6047 4.295119 GACACCTGTCCCACGCGT 62.295 66.667 5.58 5.58 39.07 6.01
5173 6154 9.749340 GCCAACCCATACCTTTTATAAGTATAT 57.251 33.333 0.00 0.00 0.00 0.86
5174 6155 8.725256 TGCCAACCCATACCTTTTATAAGTATA 58.275 33.333 0.00 0.00 0.00 1.47
5175 6156 7.588169 TGCCAACCCATACCTTTTATAAGTAT 58.412 34.615 0.00 0.00 0.00 2.12
5176 6157 6.971340 TGCCAACCCATACCTTTTATAAGTA 58.029 36.000 0.00 0.00 0.00 2.24
5177 6158 5.833340 TGCCAACCCATACCTTTTATAAGT 58.167 37.500 0.00 0.00 0.00 2.24
5178 6159 6.783708 TTGCCAACCCATACCTTTTATAAG 57.216 37.500 0.00 0.00 0.00 1.73
5179 6160 6.897966 TCATTGCCAACCCATACCTTTTATAA 59.102 34.615 0.00 0.00 0.00 0.98
5180 6161 6.436027 TCATTGCCAACCCATACCTTTTATA 58.564 36.000 0.00 0.00 0.00 0.98
5181 6162 5.276440 TCATTGCCAACCCATACCTTTTAT 58.724 37.500 0.00 0.00 0.00 1.40
5182 6163 4.678256 TCATTGCCAACCCATACCTTTTA 58.322 39.130 0.00 0.00 0.00 1.52
5183 6164 3.515562 TCATTGCCAACCCATACCTTTT 58.484 40.909 0.00 0.00 0.00 2.27
5184 6165 3.182887 TCATTGCCAACCCATACCTTT 57.817 42.857 0.00 0.00 0.00 3.11
5185 6166 2.917713 TCATTGCCAACCCATACCTT 57.082 45.000 0.00 0.00 0.00 3.50
5186 6167 3.299503 GAATCATTGCCAACCCATACCT 58.700 45.455 0.00 0.00 0.00 3.08
5187 6168 3.030291 TGAATCATTGCCAACCCATACC 58.970 45.455 0.00 0.00 0.00 2.73
5188 6169 3.701040 AGTGAATCATTGCCAACCCATAC 59.299 43.478 0.00 0.00 0.00 2.39
5189 6170 3.953612 GAGTGAATCATTGCCAACCCATA 59.046 43.478 0.00 0.00 0.00 2.74
5190 6171 2.762327 GAGTGAATCATTGCCAACCCAT 59.238 45.455 0.00 0.00 0.00 4.00
5191 6172 2.170166 GAGTGAATCATTGCCAACCCA 58.830 47.619 0.00 0.00 0.00 4.51
5192 6173 2.424956 GAGAGTGAATCATTGCCAACCC 59.575 50.000 0.00 0.00 0.00 4.11
5193 6174 2.424956 GGAGAGTGAATCATTGCCAACC 59.575 50.000 0.00 0.00 0.00 3.77
5194 6175 2.424956 GGGAGAGTGAATCATTGCCAAC 59.575 50.000 0.00 0.00 0.00 3.77
5195 6176 2.041485 TGGGAGAGTGAATCATTGCCAA 59.959 45.455 3.86 0.00 0.00 4.52
5196 6177 1.634973 TGGGAGAGTGAATCATTGCCA 59.365 47.619 2.54 2.54 0.00 4.92
5197 6178 2.425143 TGGGAGAGTGAATCATTGCC 57.575 50.000 0.00 0.00 0.00 4.52
5198 6179 3.548770 TGATGGGAGAGTGAATCATTGC 58.451 45.455 0.00 0.00 0.00 3.56
5199 6180 6.710597 AATTGATGGGAGAGTGAATCATTG 57.289 37.500 0.00 0.00 0.00 2.82
5200 6181 7.618512 AGAAAATTGATGGGAGAGTGAATCATT 59.381 33.333 0.00 0.00 0.00 2.57
5201 6182 7.124052 AGAAAATTGATGGGAGAGTGAATCAT 58.876 34.615 0.00 0.00 0.00 2.45
5202 6183 6.487828 AGAAAATTGATGGGAGAGTGAATCA 58.512 36.000 0.00 0.00 0.00 2.57
5203 6184 7.338957 AGAAGAAAATTGATGGGAGAGTGAATC 59.661 37.037 0.00 0.00 0.00 2.52
5204 6185 7.180663 AGAAGAAAATTGATGGGAGAGTGAAT 58.819 34.615 0.00 0.00 0.00 2.57
5205 6186 6.546484 AGAAGAAAATTGATGGGAGAGTGAA 58.454 36.000 0.00 0.00 0.00 3.18
5206 6187 6.131972 AGAAGAAAATTGATGGGAGAGTGA 57.868 37.500 0.00 0.00 0.00 3.41
5207 6188 6.830873 AAGAAGAAAATTGATGGGAGAGTG 57.169 37.500 0.00 0.00 0.00 3.51
5208 6189 7.944554 TGTAAAGAAGAAAATTGATGGGAGAGT 59.055 33.333 0.00 0.00 0.00 3.24
5209 6190 8.340618 TGTAAAGAAGAAAATTGATGGGAGAG 57.659 34.615 0.00 0.00 0.00 3.20
5210 6191 8.742777 CATGTAAAGAAGAAAATTGATGGGAGA 58.257 33.333 0.00 0.00 0.00 3.71
5211 6192 8.526147 ACATGTAAAGAAGAAAATTGATGGGAG 58.474 33.333 0.00 0.00 0.00 4.30
5212 6193 8.421249 ACATGTAAAGAAGAAAATTGATGGGA 57.579 30.769 0.00 0.00 0.00 4.37
5224 6205 9.665719 TCTTGCATATGTTACATGTAAAGAAGA 57.334 29.630 19.63 14.34 31.29 2.87
5225 6206 9.708222 GTCTTGCATATGTTACATGTAAAGAAG 57.292 33.333 19.63 12.67 33.72 2.85
5226 6207 9.448438 AGTCTTGCATATGTTACATGTAAAGAA 57.552 29.630 19.63 9.26 33.72 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.