Multiple sequence alignment - TraesCS1A01G354800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G354800 chr1A 100.000 2267 0 0 1 2267 537816963 537819229 0.000000e+00 4187.0
1 TraesCS1A01G354800 chr1A 92.973 185 10 3 1759 1942 24582712 24582894 1.330000e-67 267.0
2 TraesCS1A01G354800 chr1A 90.385 104 3 3 774 877 583586982 583586886 1.830000e-26 130.0
3 TraesCS1A01G354800 chr1D 91.993 537 41 2 3 538 440088382 440087847 0.000000e+00 752.0
4 TraesCS1A01G354800 chr1D 86.184 608 53 17 895 1481 440087444 440086847 1.480000e-176 628.0
5 TraesCS1A01G354800 chr1D 85.319 361 35 9 1 345 17181254 17181612 7.700000e-95 357.0
6 TraesCS1A01G354800 chr1D 88.476 269 21 6 581 847 440087847 440087587 1.310000e-82 316.0
7 TraesCS1A01G354800 chr1D 87.365 277 27 5 1485 1753 440086811 440086535 6.080000e-81 311.0
8 TraesCS1A01G354800 chr1D 94.186 86 2 1 774 856 486065940 486065855 6.570000e-26 128.0
9 TraesCS1A01G354800 chr1B 89.427 558 59 0 1 558 597669041 597668484 0.000000e+00 704.0
10 TraesCS1A01G354800 chr1B 83.543 796 64 22 1000 1743 597667952 597667172 0.000000e+00 682.0
11 TraesCS1A01G354800 chr1B 86.349 315 26 16 574 878 597668498 597668191 6.040000e-86 327.0
12 TraesCS1A01G354800 chr1B 95.276 127 5 1 2141 2267 38285207 38285082 1.370000e-47 200.0
13 TraesCS1A01G354800 chr1B 94.118 85 2 1 774 855 676738918 676738834 2.360000e-25 126.0
14 TraesCS1A01G354800 chr1B 94.048 84 3 1 774 855 676774963 676774880 2.360000e-25 126.0
15 TraesCS1A01G354800 chr2A 80.000 565 91 17 2 545 738037306 738037869 4.540000e-107 398.0
16 TraesCS1A01G354800 chr2A 80.550 545 80 13 2 526 763347385 763347923 1.630000e-106 396.0
17 TraesCS1A01G354800 chr2A 92.632 190 12 2 1758 1947 744892473 744892660 2.870000e-69 272.0
18 TraesCS1A01G354800 chr3A 79.676 556 92 16 5 540 143948471 143947917 4.570000e-102 381.0
19 TraesCS1A01G354800 chr3A 82.031 256 42 4 3 256 545283306 545283053 4.900000e-52 215.0
20 TraesCS1A01G354800 chr5A 79.433 564 82 19 2 538 577765845 577765289 3.560000e-98 368.0
21 TraesCS1A01G354800 chr2B 95.699 186 7 1 1758 1943 24927102 24926918 4.730000e-77 298.0
22 TraesCS1A01G354800 chr2B 90.576 191 15 3 1759 1947 626598481 626598292 1.340000e-62 250.0
23 TraesCS1A01G354800 chr2B 88.889 99 8 3 773 869 599821979 599822076 3.960000e-23 119.0
24 TraesCS1A01G354800 chr2D 94.737 190 7 3 1758 1947 373506224 373506038 2.200000e-75 292.0
25 TraesCS1A01G354800 chr2D 86.979 192 23 2 1759 1949 445181541 445181731 4.900000e-52 215.0
26 TraesCS1A01G354800 chr2D 95.181 83 4 0 773 855 510217089 510217171 5.080000e-27 132.0
27 TraesCS1A01G354800 chr4B 94.086 186 9 2 1758 1943 122885343 122885526 4.770000e-72 281.0
28 TraesCS1A01G354800 chr6B 93.617 188 10 2 1758 1945 11834513 11834328 1.710000e-71 279.0
29 TraesCS1A01G354800 chr6B 79.252 294 51 9 4 293 132758690 132758403 1.780000e-46 196.0
30 TraesCS1A01G354800 chr3B 82.213 253 41 4 3 253 792766251 792766501 4.900000e-52 215.0
31 TraesCS1A01G354800 chr3B 100.000 28 0 0 318 345 644328949 644328976 4.000000e-03 52.8
32 TraesCS1A01G354800 chr5D 81.250 256 45 3 3 256 30680503 30680757 1.060000e-48 204.0
33 TraesCS1A01G354800 chr5B 93.525 139 6 3 2131 2267 406057122 406057259 1.060000e-48 204.0
34 TraesCS1A01G354800 chr5B 86.598 194 14 7 1759 1945 657155414 657155602 1.060000e-48 204.0
35 TraesCS1A01G354800 chr3D 90.722 97 7 1 777 873 395077809 395077715 6.570000e-26 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G354800 chr1A 537816963 537819229 2266 False 4187.00 4187 100.000000 1 2267 1 chr1A.!!$F2 2266
1 TraesCS1A01G354800 chr1D 440086535 440088382 1847 True 501.75 752 88.504500 3 1753 4 chr1D.!!$R2 1750
2 TraesCS1A01G354800 chr1B 597667172 597669041 1869 True 571.00 704 86.439667 1 1743 3 chr1B.!!$R4 1742
3 TraesCS1A01G354800 chr2A 738037306 738037869 563 False 398.00 398 80.000000 2 545 1 chr2A.!!$F1 543
4 TraesCS1A01G354800 chr2A 763347385 763347923 538 False 396.00 396 80.550000 2 526 1 chr2A.!!$F3 524
5 TraesCS1A01G354800 chr3A 143947917 143948471 554 True 381.00 381 79.676000 5 540 1 chr3A.!!$R1 535
6 TraesCS1A01G354800 chr5A 577765289 577765845 556 True 368.00 368 79.433000 2 538 1 chr5A.!!$R1 536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
394 434 0.109226 CGGTTTCTCTCCTGACGGAC 60.109 60.0 0.0 0.0 34.92 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1839 2129 0.027586 GCGTTTACATGGGACGATGC 59.972 55.0 17.97 4.24 38.99 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 6.498651 AGGGGTAGTGTATCCTTGAATGATAG 59.501 42.308 0.00 0.00 0.00 2.08
42 43 7.453752 GGGGTAGTGTATCCTTGAATGATAGTA 59.546 40.741 0.00 0.00 0.00 1.82
70 71 8.370940 GTCTGTGATCCTTGGATCTTTGATATA 58.629 37.037 24.74 4.96 33.01 0.86
82 85 8.267183 TGGATCTTTGATATAGCACTCTTTTCA 58.733 33.333 0.00 0.00 0.00 2.69
141 146 8.823220 AGGTTTTAATGAGGCAATAGTAATGT 57.177 30.769 0.00 0.00 0.00 2.71
179 184 7.523293 TGTCATTTTCTCCTTATTTCTGCAA 57.477 32.000 0.00 0.00 0.00 4.08
193 199 8.688747 TTATTTCTGCAATGGGTTTTTCAAAT 57.311 26.923 0.00 0.00 0.00 2.32
259 280 4.591321 ACATGATTTTTGGAGGAGGCTA 57.409 40.909 0.00 0.00 0.00 3.93
260 281 4.273318 ACATGATTTTTGGAGGAGGCTAC 58.727 43.478 0.00 0.00 0.00 3.58
362 401 6.605471 AATTAAAGAAAACCCCTGCTTAGG 57.395 37.500 0.00 0.00 0.00 2.69
387 427 2.904434 ACCAACATACGGTTTCTCTCCT 59.096 45.455 0.00 0.00 37.72 3.69
394 434 0.109226 CGGTTTCTCTCCTGACGGAC 60.109 60.000 0.00 0.00 34.92 4.79
449 490 3.387699 TCCCATCTCTTGTAATGATCGCA 59.612 43.478 0.00 0.00 0.00 5.10
561 607 9.758651 CTTTAAAATAACAAATGGCTATACCCC 57.241 33.333 0.00 0.00 37.83 4.95
562 608 6.399639 AAAATAACAAATGGCTATACCCCG 57.600 37.500 0.00 0.00 37.83 5.73
563 609 1.687563 AACAAATGGCTATACCCCGC 58.312 50.000 0.00 0.00 37.83 6.13
564 610 0.548989 ACAAATGGCTATACCCCGCA 59.451 50.000 0.00 0.00 37.83 5.69
565 611 1.064314 ACAAATGGCTATACCCCGCAA 60.064 47.619 0.00 0.00 37.83 4.85
566 612 2.028130 CAAATGGCTATACCCCGCAAA 58.972 47.619 0.00 0.00 37.83 3.68
567 613 2.428890 CAAATGGCTATACCCCGCAAAA 59.571 45.455 0.00 0.00 37.83 2.44
568 614 2.445682 ATGGCTATACCCCGCAAAAA 57.554 45.000 0.00 0.00 37.83 1.94
691 751 5.417580 ACTTGACAGAACTGCAAACCTTTAA 59.582 36.000 1.46 0.00 0.00 1.52
693 753 5.646606 TGACAGAACTGCAAACCTTTAAAC 58.353 37.500 1.46 0.00 0.00 2.01
720 780 1.141881 ACTGATCTTAGGCGTGGCG 59.858 57.895 0.00 0.00 0.00 5.69
726 786 0.535335 TCTTAGGCGTGGCGAAAGAT 59.465 50.000 9.19 0.00 29.47 2.40
748 808 9.941664 AAGATCACGCTGATTAGAAATAAAATG 57.058 29.630 0.00 0.00 37.20 2.32
750 810 9.722056 GATCACGCTGATTAGAAATAAAATGTT 57.278 29.630 2.70 0.00 37.20 2.71
893 1081 1.531739 TTTCGGCATGCCAACCCTTC 61.532 55.000 34.93 6.89 35.37 3.46
900 1095 2.517959 CATGCCAACCCTTCAAGAGAA 58.482 47.619 0.00 0.00 0.00 2.87
905 1100 2.294512 CCAACCCTTCAAGAGAAACTGC 59.705 50.000 0.00 0.00 32.35 4.40
946 1145 0.606604 GTACGCTGGAACCTTCAGGA 59.393 55.000 0.00 0.00 38.94 3.86
947 1146 1.001633 GTACGCTGGAACCTTCAGGAA 59.998 52.381 0.00 0.00 38.94 3.36
956 1165 3.502595 GGAACCTTCAGGAAAACACTAGC 59.497 47.826 0.00 0.00 38.94 3.42
1268 1507 4.406173 CGTGCTCCGCGACTGACT 62.406 66.667 8.23 0.00 39.94 3.41
1361 1601 6.684613 GCGGATAATAAAGGTACTGGAACTGA 60.685 42.308 0.00 0.00 40.86 3.41
1362 1602 7.270047 CGGATAATAAAGGTACTGGAACTGAA 58.730 38.462 0.00 0.00 40.86 3.02
1363 1603 7.224167 CGGATAATAAAGGTACTGGAACTGAAC 59.776 40.741 0.00 0.00 40.86 3.18
1364 1604 8.265764 GGATAATAAAGGTACTGGAACTGAACT 58.734 37.037 0.00 0.00 40.86 3.01
1365 1605 9.099454 GATAATAAAGGTACTGGAACTGAACTG 57.901 37.037 0.00 0.00 40.86 3.16
1370 1616 4.881850 AGGTACTGGAACTGAACTGTTTTG 59.118 41.667 0.00 0.00 37.18 2.44
1374 1620 3.030291 TGGAACTGAACTGTTTTGGCAT 58.970 40.909 0.00 0.00 0.00 4.40
1381 1627 4.378774 TGAACTGTTTTGGCATTGGAATG 58.621 39.130 0.00 0.00 39.40 2.67
1411 1657 2.222027 GCTGGTATTGCTGGTATGGTC 58.778 52.381 0.00 0.00 0.00 4.02
1417 1663 5.133221 GGTATTGCTGGTATGGTCTCAAAT 58.867 41.667 0.00 0.00 0.00 2.32
1418 1664 6.126623 TGGTATTGCTGGTATGGTCTCAAATA 60.127 38.462 0.00 0.00 0.00 1.40
1420 1666 6.949352 ATTGCTGGTATGGTCTCAAATAAG 57.051 37.500 0.00 0.00 0.00 1.73
1427 1674 8.974060 TGGTATGGTCTCAAATAAGTTAATCC 57.026 34.615 0.00 0.00 0.00 3.01
1428 1675 8.553153 TGGTATGGTCTCAAATAAGTTAATCCA 58.447 33.333 0.00 0.00 0.00 3.41
1432 1679 6.889177 TGGTCTCAAATAAGTTAATCCATGCA 59.111 34.615 0.00 0.00 0.00 3.96
1440 1687 9.976511 AAATAAGTTAATCCATGCATGATTCTG 57.023 29.630 28.31 10.81 0.00 3.02
1481 1731 1.510480 GAAAACTCACCTGCGCTGCT 61.510 55.000 9.73 0.00 0.00 4.24
1482 1732 1.510480 AAAACTCACCTGCGCTGCTC 61.510 55.000 9.73 0.00 0.00 4.26
1520 1802 1.955778 TGAAACTGTGATTGGTGGCTG 59.044 47.619 0.00 0.00 0.00 4.85
1540 1822 2.948979 TGTAGTTGACCAGGCAGTTTTG 59.051 45.455 0.00 0.00 0.00 2.44
1545 1827 3.228188 TGACCAGGCAGTTTTGAGATT 57.772 42.857 0.00 0.00 0.00 2.40
1548 1830 5.324409 TGACCAGGCAGTTTTGAGATTAAT 58.676 37.500 0.00 0.00 0.00 1.40
1554 1836 5.246883 AGGCAGTTTTGAGATTAATTGGCTT 59.753 36.000 3.49 0.00 41.75 4.35
1563 1845 7.367159 TGAGATTAATTGGCTTTGCAAATTG 57.633 32.000 13.23 2.98 41.59 2.32
1581 1863 2.024176 TGTAGGACCAGGAAGCAGAA 57.976 50.000 0.00 0.00 0.00 3.02
1615 1897 1.202110 CCAGCGACATTGTTGCAGATC 60.202 52.381 26.73 1.74 44.70 2.75
1658 1948 0.667184 CGTTTGCCCCATGTTCTTGC 60.667 55.000 0.00 0.00 0.00 4.01
1659 1949 0.667184 GTTTGCCCCATGTTCTTGCG 60.667 55.000 0.00 0.00 0.00 4.85
1692 1982 3.194968 CACGGTAGCGATTAATCCCCTAT 59.805 47.826 22.88 0.00 0.00 2.57
1705 1995 3.358111 TCCCCTATCGTTGCAATTTGA 57.642 42.857 0.59 1.55 0.00 2.69
1734 2024 7.397892 TGTAGAGATGTTAGTTCTTCAGGAG 57.602 40.000 0.00 0.00 0.00 3.69
1753 2043 4.534103 AGGAGCTTGAAGAATGTAGGTCTT 59.466 41.667 0.00 0.00 38.05 3.01
1754 2044 4.633565 GGAGCTTGAAGAATGTAGGTCTTG 59.366 45.833 0.00 0.00 35.46 3.02
1755 2045 4.006319 AGCTTGAAGAATGTAGGTCTTGC 58.994 43.478 0.00 0.00 35.46 4.01
1756 2046 3.127721 GCTTGAAGAATGTAGGTCTTGCC 59.872 47.826 0.00 0.00 35.46 4.52
1757 2047 3.350219 TGAAGAATGTAGGTCTTGCCC 57.650 47.619 0.00 0.00 35.46 5.36
1758 2048 2.912956 TGAAGAATGTAGGTCTTGCCCT 59.087 45.455 0.00 0.00 35.46 5.19
1759 2049 3.055094 TGAAGAATGTAGGTCTTGCCCTC 60.055 47.826 0.00 0.00 35.46 4.30
1760 2050 2.551270 AGAATGTAGGTCTTGCCCTCA 58.449 47.619 0.00 0.00 38.26 3.86
1761 2051 3.118531 AGAATGTAGGTCTTGCCCTCAT 58.881 45.455 0.00 0.00 38.26 2.90
1762 2052 4.298626 AGAATGTAGGTCTTGCCCTCATA 58.701 43.478 0.00 0.00 38.26 2.15
1763 2053 4.910304 AGAATGTAGGTCTTGCCCTCATAT 59.090 41.667 0.00 0.00 38.26 1.78
1764 2054 5.370880 AGAATGTAGGTCTTGCCCTCATATT 59.629 40.000 0.00 0.00 38.26 1.28
1765 2055 5.653255 ATGTAGGTCTTGCCCTCATATTT 57.347 39.130 0.00 0.00 38.26 1.40
1766 2056 4.780815 TGTAGGTCTTGCCCTCATATTTG 58.219 43.478 0.00 0.00 38.26 2.32
1767 2057 3.303351 AGGTCTTGCCCTCATATTTGG 57.697 47.619 0.00 0.00 38.26 3.28
1768 2058 2.852449 AGGTCTTGCCCTCATATTTGGA 59.148 45.455 0.00 0.00 38.26 3.53
1769 2059 3.117738 AGGTCTTGCCCTCATATTTGGAG 60.118 47.826 0.00 0.00 38.26 3.86
1770 2060 3.117888 GGTCTTGCCCTCATATTTGGAGA 60.118 47.826 0.00 0.00 34.24 3.71
1771 2061 4.446889 GGTCTTGCCCTCATATTTGGAGAT 60.447 45.833 0.00 0.00 34.24 2.75
1772 2062 5.221925 GGTCTTGCCCTCATATTTGGAGATA 60.222 44.000 0.00 0.00 34.24 1.98
1773 2063 5.936956 GTCTTGCCCTCATATTTGGAGATAG 59.063 44.000 0.00 0.00 34.24 2.08
1774 2064 5.608437 TCTTGCCCTCATATTTGGAGATAGT 59.392 40.000 0.00 0.00 34.24 2.12
1775 2065 5.912149 TGCCCTCATATTTGGAGATAGTT 57.088 39.130 0.00 0.00 34.24 2.24
1776 2066 6.266131 TGCCCTCATATTTGGAGATAGTTT 57.734 37.500 0.00 0.00 34.24 2.66
1777 2067 6.299141 TGCCCTCATATTTGGAGATAGTTTC 58.701 40.000 0.00 0.00 34.24 2.78
1778 2068 5.707764 GCCCTCATATTTGGAGATAGTTTCC 59.292 44.000 0.00 0.00 34.24 3.13
1779 2069 6.466470 GCCCTCATATTTGGAGATAGTTTCCT 60.466 42.308 0.00 0.00 35.67 3.36
1780 2070 7.164803 CCCTCATATTTGGAGATAGTTTCCTC 58.835 42.308 0.00 0.00 35.67 3.71
1781 2071 7.017056 CCCTCATATTTGGAGATAGTTTCCTCT 59.983 40.741 0.00 0.00 35.67 3.69
1782 2072 8.093927 CCTCATATTTGGAGATAGTTTCCTCTC 58.906 40.741 0.00 0.00 37.72 3.20
1791 2081 7.696992 GAGATAGTTTCCTCTCCTATGTAGG 57.303 44.000 0.00 0.00 45.02 3.18
1792 2082 6.557568 AGATAGTTTCCTCTCCTATGTAGGG 58.442 44.000 6.25 0.00 43.79 3.53
1793 2083 3.310193 AGTTTCCTCTCCTATGTAGGGC 58.690 50.000 6.25 0.00 43.79 5.19
1794 2084 1.996798 TTCCTCTCCTATGTAGGGCG 58.003 55.000 6.25 0.00 43.79 6.13
1795 2085 0.851469 TCCTCTCCTATGTAGGGCGT 59.149 55.000 6.25 0.00 43.79 5.68
1796 2086 1.217183 TCCTCTCCTATGTAGGGCGTT 59.783 52.381 6.25 0.00 43.79 4.84
1797 2087 1.341531 CCTCTCCTATGTAGGGCGTTG 59.658 57.143 6.25 0.00 43.79 4.10
1798 2088 2.032620 CTCTCCTATGTAGGGCGTTGT 58.967 52.381 6.25 0.00 43.79 3.32
1799 2089 2.029623 TCTCCTATGTAGGGCGTTGTC 58.970 52.381 6.25 0.00 43.79 3.18
1800 2090 2.032620 CTCCTATGTAGGGCGTTGTCT 58.967 52.381 6.25 0.00 43.79 3.41
1801 2091 2.431057 CTCCTATGTAGGGCGTTGTCTT 59.569 50.000 6.25 0.00 43.79 3.01
1802 2092 2.835764 TCCTATGTAGGGCGTTGTCTTT 59.164 45.455 6.25 0.00 43.79 2.52
1803 2093 3.118884 TCCTATGTAGGGCGTTGTCTTTC 60.119 47.826 6.25 0.00 43.79 2.62
1804 2094 3.118738 CCTATGTAGGGCGTTGTCTTTCT 60.119 47.826 0.00 0.00 39.86 2.52
1805 2095 2.922740 TGTAGGGCGTTGTCTTTCTT 57.077 45.000 0.00 0.00 0.00 2.52
1806 2096 4.546829 ATGTAGGGCGTTGTCTTTCTTA 57.453 40.909 0.00 0.00 0.00 2.10
1807 2097 3.921677 TGTAGGGCGTTGTCTTTCTTAG 58.078 45.455 0.00 0.00 0.00 2.18
1808 2098 3.322828 TGTAGGGCGTTGTCTTTCTTAGT 59.677 43.478 0.00 0.00 0.00 2.24
1809 2099 2.767505 AGGGCGTTGTCTTTCTTAGTG 58.232 47.619 0.00 0.00 0.00 2.74
1810 2100 1.804748 GGGCGTTGTCTTTCTTAGTGG 59.195 52.381 0.00 0.00 0.00 4.00
1811 2101 1.804748 GGCGTTGTCTTTCTTAGTGGG 59.195 52.381 0.00 0.00 0.00 4.61
1812 2102 2.549349 GGCGTTGTCTTTCTTAGTGGGA 60.549 50.000 0.00 0.00 0.00 4.37
1813 2103 2.479275 GCGTTGTCTTTCTTAGTGGGAC 59.521 50.000 0.00 0.00 0.00 4.46
1814 2104 3.724374 CGTTGTCTTTCTTAGTGGGACA 58.276 45.455 0.00 0.00 35.51 4.02
1815 2105 4.315803 CGTTGTCTTTCTTAGTGGGACAT 58.684 43.478 0.00 0.00 44.52 3.06
1816 2106 4.755123 CGTTGTCTTTCTTAGTGGGACATT 59.245 41.667 0.00 0.00 44.52 2.71
1817 2107 5.238650 CGTTGTCTTTCTTAGTGGGACATTT 59.761 40.000 0.00 0.00 44.52 2.32
1818 2108 6.238648 CGTTGTCTTTCTTAGTGGGACATTTT 60.239 38.462 0.00 0.00 44.52 1.82
1819 2109 6.877611 TGTCTTTCTTAGTGGGACATTTTC 57.122 37.500 0.00 0.00 44.52 2.29
1820 2110 6.601332 TGTCTTTCTTAGTGGGACATTTTCT 58.399 36.000 0.00 0.00 44.52 2.52
1821 2111 7.060421 TGTCTTTCTTAGTGGGACATTTTCTT 58.940 34.615 0.00 0.00 44.52 2.52
1822 2112 7.013274 TGTCTTTCTTAGTGGGACATTTTCTTG 59.987 37.037 0.00 0.00 44.52 3.02
1823 2113 5.705609 TTCTTAGTGGGACATTTTCTTGC 57.294 39.130 0.00 0.00 44.52 4.01
1824 2114 4.079253 TCTTAGTGGGACATTTTCTTGCC 58.921 43.478 0.00 0.00 44.52 4.52
1825 2115 2.380064 AGTGGGACATTTTCTTGCCA 57.620 45.000 0.00 0.00 44.52 4.92
1826 2116 2.242043 AGTGGGACATTTTCTTGCCAG 58.758 47.619 0.00 0.00 44.52 4.85
1827 2117 0.968405 TGGGACATTTTCTTGCCAGC 59.032 50.000 0.00 0.00 0.00 4.85
1828 2118 0.247460 GGGACATTTTCTTGCCAGCC 59.753 55.000 0.00 0.00 0.00 4.85
1829 2119 0.968405 GGACATTTTCTTGCCAGCCA 59.032 50.000 0.00 0.00 0.00 4.75
1830 2120 1.067354 GGACATTTTCTTGCCAGCCAG 60.067 52.381 0.00 0.00 0.00 4.85
1831 2121 0.971386 ACATTTTCTTGCCAGCCAGG 59.029 50.000 0.00 0.00 41.84 4.45
1849 2139 4.377370 CACAGTTGCATCGTCCCA 57.623 55.556 0.00 0.00 0.00 4.37
1850 2140 2.858622 CACAGTTGCATCGTCCCAT 58.141 52.632 0.00 0.00 0.00 4.00
1851 2141 0.448990 CACAGTTGCATCGTCCCATG 59.551 55.000 0.00 0.00 0.00 3.66
1852 2142 0.036732 ACAGTTGCATCGTCCCATGT 59.963 50.000 0.00 0.00 0.00 3.21
1853 2143 1.277842 ACAGTTGCATCGTCCCATGTA 59.722 47.619 0.00 0.00 0.00 2.29
1854 2144 2.290008 ACAGTTGCATCGTCCCATGTAA 60.290 45.455 0.00 0.00 0.00 2.41
1855 2145 2.746904 CAGTTGCATCGTCCCATGTAAA 59.253 45.455 0.00 0.00 31.17 2.01
1856 2146 2.747446 AGTTGCATCGTCCCATGTAAAC 59.253 45.455 0.00 0.00 31.17 2.01
1857 2147 1.364721 TGCATCGTCCCATGTAAACG 58.635 50.000 5.65 5.65 37.74 3.60
1858 2148 0.027586 GCATCGTCCCATGTAAACGC 59.972 55.000 6.83 0.00 36.40 4.84
1859 2149 0.300491 CATCGTCCCATGTAAACGCG 59.700 55.000 3.53 3.53 36.40 6.01
1860 2150 0.808453 ATCGTCCCATGTAAACGCGG 60.808 55.000 12.47 0.00 36.40 6.46
1861 2151 2.789249 GTCCCATGTAAACGCGGC 59.211 61.111 12.47 0.00 0.00 6.53
1862 2152 2.437002 TCCCATGTAAACGCGGCC 60.437 61.111 12.47 0.00 0.00 6.13
1863 2153 2.437716 CCCATGTAAACGCGGCCT 60.438 61.111 12.47 0.00 0.00 5.19
1864 2154 2.760159 CCCATGTAAACGCGGCCTG 61.760 63.158 12.47 0.00 0.00 4.85
1865 2155 2.100216 CATGTAAACGCGGCCTGC 59.900 61.111 12.47 5.20 41.47 4.85
1866 2156 3.131478 ATGTAAACGCGGCCTGCC 61.131 61.111 12.47 0.00 42.08 4.85
1878 2168 3.699894 CCTGCCGCTGGACACTCT 61.700 66.667 10.72 0.00 0.00 3.24
1879 2169 2.433838 CTGCCGCTGGACACTCTG 60.434 66.667 0.00 0.00 0.00 3.35
1880 2170 3.231889 CTGCCGCTGGACACTCTGT 62.232 63.158 0.00 0.00 0.00 3.41
1881 2171 1.877576 CTGCCGCTGGACACTCTGTA 61.878 60.000 0.00 0.00 0.00 2.74
1882 2172 1.257750 TGCCGCTGGACACTCTGTAT 61.258 55.000 0.00 0.00 0.00 2.29
1883 2173 0.108138 GCCGCTGGACACTCTGTATT 60.108 55.000 0.00 0.00 0.00 1.89
1884 2174 1.136305 GCCGCTGGACACTCTGTATTA 59.864 52.381 0.00 0.00 0.00 0.98
1885 2175 2.224066 GCCGCTGGACACTCTGTATTAT 60.224 50.000 0.00 0.00 0.00 1.28
1886 2176 3.741388 GCCGCTGGACACTCTGTATTATT 60.741 47.826 0.00 0.00 0.00 1.40
1887 2177 4.442706 CCGCTGGACACTCTGTATTATTT 58.557 43.478 0.00 0.00 0.00 1.40
1888 2178 4.508124 CCGCTGGACACTCTGTATTATTTC 59.492 45.833 0.00 0.00 0.00 2.17
1889 2179 5.352284 CGCTGGACACTCTGTATTATTTCT 58.648 41.667 0.00 0.00 0.00 2.52
1890 2180 5.460419 CGCTGGACACTCTGTATTATTTCTC 59.540 44.000 0.00 0.00 0.00 2.87
1891 2181 5.755861 GCTGGACACTCTGTATTATTTCTCC 59.244 44.000 0.00 0.00 0.00 3.71
1892 2182 6.407525 GCTGGACACTCTGTATTATTTCTCCT 60.408 42.308 0.00 0.00 0.00 3.69
1893 2183 7.496346 TGGACACTCTGTATTATTTCTCCTT 57.504 36.000 0.00 0.00 0.00 3.36
1894 2184 7.918076 TGGACACTCTGTATTATTTCTCCTTT 58.082 34.615 0.00 0.00 0.00 3.11
1895 2185 8.041323 TGGACACTCTGTATTATTTCTCCTTTC 58.959 37.037 0.00 0.00 0.00 2.62
1896 2186 7.496263 GGACACTCTGTATTATTTCTCCTTTCC 59.504 40.741 0.00 0.00 0.00 3.13
1897 2187 8.152023 ACACTCTGTATTATTTCTCCTTTCCT 57.848 34.615 0.00 0.00 0.00 3.36
1898 2188 8.261522 ACACTCTGTATTATTTCTCCTTTCCTC 58.738 37.037 0.00 0.00 0.00 3.71
1899 2189 8.482128 CACTCTGTATTATTTCTCCTTTCCTCT 58.518 37.037 0.00 0.00 0.00 3.69
1900 2190 9.716556 ACTCTGTATTATTTCTCCTTTCCTCTA 57.283 33.333 0.00 0.00 0.00 2.43
1908 2198 9.982651 TTATTTCTCCTTTCCTCTAATACATCG 57.017 33.333 0.00 0.00 0.00 3.84
1909 2199 6.406692 TTCTCCTTTCCTCTAATACATCGG 57.593 41.667 0.00 0.00 0.00 4.18
1910 2200 4.281182 TCTCCTTTCCTCTAATACATCGGC 59.719 45.833 0.00 0.00 0.00 5.54
1911 2201 3.964688 TCCTTTCCTCTAATACATCGGCA 59.035 43.478 0.00 0.00 0.00 5.69
1912 2202 4.058817 CCTTTCCTCTAATACATCGGCAC 58.941 47.826 0.00 0.00 0.00 5.01
1961 2251 2.067365 AAAAAGGTCTTGCCCTTCGT 57.933 45.000 0.00 0.00 44.14 3.85
1962 2252 2.943036 AAAAGGTCTTGCCCTTCGTA 57.057 45.000 0.00 0.00 44.14 3.43
1963 2253 2.180432 AAAGGTCTTGCCCTTCGTAC 57.820 50.000 0.00 0.00 44.14 3.67
1964 2254 0.323957 AAGGTCTTGCCCTTCGTACC 59.676 55.000 0.00 0.00 40.98 3.34
1965 2255 0.544595 AGGTCTTGCCCTTCGTACCT 60.545 55.000 0.00 0.00 38.26 3.08
1966 2256 1.188863 GGTCTTGCCCTTCGTACCTA 58.811 55.000 0.00 0.00 0.00 3.08
1967 2257 1.136500 GGTCTTGCCCTTCGTACCTAG 59.864 57.143 0.00 0.00 0.00 3.02
1968 2258 2.097825 GTCTTGCCCTTCGTACCTAGA 58.902 52.381 0.00 0.00 0.00 2.43
1969 2259 2.097825 TCTTGCCCTTCGTACCTAGAC 58.902 52.381 0.00 0.00 0.00 2.59
1970 2260 2.100989 CTTGCCCTTCGTACCTAGACT 58.899 52.381 0.00 0.00 0.00 3.24
1971 2261 2.226962 TGCCCTTCGTACCTAGACTT 57.773 50.000 0.00 0.00 0.00 3.01
1972 2262 1.822990 TGCCCTTCGTACCTAGACTTG 59.177 52.381 0.00 0.00 0.00 3.16
1973 2263 1.823610 GCCCTTCGTACCTAGACTTGT 59.176 52.381 0.00 0.00 0.00 3.16
1974 2264 2.233186 GCCCTTCGTACCTAGACTTGTT 59.767 50.000 0.00 0.00 0.00 2.83
1975 2265 3.306571 GCCCTTCGTACCTAGACTTGTTT 60.307 47.826 0.00 0.00 0.00 2.83
1976 2266 4.801914 GCCCTTCGTACCTAGACTTGTTTT 60.802 45.833 0.00 0.00 0.00 2.43
1977 2267 4.689345 CCCTTCGTACCTAGACTTGTTTTG 59.311 45.833 0.00 0.00 0.00 2.44
1978 2268 4.689345 CCTTCGTACCTAGACTTGTTTTGG 59.311 45.833 0.00 0.00 0.00 3.28
1979 2269 4.942761 TCGTACCTAGACTTGTTTTGGT 57.057 40.909 0.00 3.43 0.00 3.67
1980 2270 4.874970 TCGTACCTAGACTTGTTTTGGTC 58.125 43.478 1.32 0.00 0.00 4.02
1981 2271 3.671928 CGTACCTAGACTTGTTTTGGTCG 59.328 47.826 1.32 2.97 37.52 4.79
1982 2272 4.557296 CGTACCTAGACTTGTTTTGGTCGA 60.557 45.833 1.32 0.00 37.52 4.20
1983 2273 3.991367 ACCTAGACTTGTTTTGGTCGAG 58.009 45.455 0.00 0.00 37.52 4.04
1984 2274 3.387050 ACCTAGACTTGTTTTGGTCGAGT 59.613 43.478 0.00 0.00 37.52 4.18
1985 2275 3.741344 CCTAGACTTGTTTTGGTCGAGTG 59.259 47.826 0.00 0.00 37.52 3.51
1986 2276 1.940613 AGACTTGTTTTGGTCGAGTGC 59.059 47.619 0.00 0.00 37.52 4.40
1987 2277 1.940613 GACTTGTTTTGGTCGAGTGCT 59.059 47.619 0.00 0.00 30.65 4.40
1988 2278 2.354821 GACTTGTTTTGGTCGAGTGCTT 59.645 45.455 0.00 0.00 30.65 3.91
1989 2279 2.752903 ACTTGTTTTGGTCGAGTGCTTT 59.247 40.909 0.00 0.00 0.00 3.51
1990 2280 3.942748 ACTTGTTTTGGTCGAGTGCTTTA 59.057 39.130 0.00 0.00 0.00 1.85
1991 2281 4.578928 ACTTGTTTTGGTCGAGTGCTTTAT 59.421 37.500 0.00 0.00 0.00 1.40
1992 2282 4.481930 TGTTTTGGTCGAGTGCTTTATG 57.518 40.909 0.00 0.00 0.00 1.90
1993 2283 3.234386 GTTTTGGTCGAGTGCTTTATGC 58.766 45.455 0.00 0.00 43.25 3.14
2002 2292 3.111038 GCTTTATGCAGGGTCGGC 58.889 61.111 0.00 0.00 42.31 5.54
2003 2293 1.748879 GCTTTATGCAGGGTCGGCA 60.749 57.895 0.00 0.00 46.66 5.69
2004 2294 1.718757 GCTTTATGCAGGGTCGGCAG 61.719 60.000 0.00 0.00 45.68 4.85
2005 2295 0.107703 CTTTATGCAGGGTCGGCAGA 60.108 55.000 0.00 0.00 45.68 4.26
2006 2296 0.546122 TTTATGCAGGGTCGGCAGAT 59.454 50.000 0.00 0.00 45.68 2.90
2007 2297 1.419381 TTATGCAGGGTCGGCAGATA 58.581 50.000 0.00 0.00 45.68 1.98
2008 2298 0.679505 TATGCAGGGTCGGCAGATAC 59.320 55.000 0.00 0.00 45.68 2.24
2009 2299 2.279517 GCAGGGTCGGCAGATACG 60.280 66.667 0.00 0.00 0.00 3.06
2010 2300 2.417516 CAGGGTCGGCAGATACGG 59.582 66.667 0.00 0.00 0.00 4.02
2011 2301 2.043248 AGGGTCGGCAGATACGGT 60.043 61.111 0.00 0.00 0.00 4.83
2012 2302 1.105167 CAGGGTCGGCAGATACGGTA 61.105 60.000 0.00 0.00 0.00 4.02
2013 2303 0.822532 AGGGTCGGCAGATACGGTAG 60.823 60.000 0.00 0.00 0.00 3.18
2014 2304 0.820891 GGGTCGGCAGATACGGTAGA 60.821 60.000 0.00 0.00 0.00 2.59
2015 2305 1.027357 GGTCGGCAGATACGGTAGAA 58.973 55.000 0.00 0.00 0.00 2.10
2016 2306 1.406539 GGTCGGCAGATACGGTAGAAA 59.593 52.381 0.00 0.00 0.00 2.52
2017 2307 2.035576 GGTCGGCAGATACGGTAGAAAT 59.964 50.000 0.00 0.00 0.00 2.17
2018 2308 3.254166 GGTCGGCAGATACGGTAGAAATA 59.746 47.826 0.00 0.00 0.00 1.40
2019 2309 4.261741 GGTCGGCAGATACGGTAGAAATAA 60.262 45.833 0.00 0.00 0.00 1.40
2020 2310 5.284079 GTCGGCAGATACGGTAGAAATAAA 58.716 41.667 0.00 0.00 0.00 1.40
2021 2311 5.401674 GTCGGCAGATACGGTAGAAATAAAG 59.598 44.000 0.00 0.00 0.00 1.85
2022 2312 5.300034 TCGGCAGATACGGTAGAAATAAAGA 59.700 40.000 0.00 0.00 0.00 2.52
2023 2313 5.981315 CGGCAGATACGGTAGAAATAAAGAA 59.019 40.000 0.00 0.00 0.00 2.52
2024 2314 6.477688 CGGCAGATACGGTAGAAATAAAGAAA 59.522 38.462 0.00 0.00 0.00 2.52
2025 2315 7.010738 CGGCAGATACGGTAGAAATAAAGAAAA 59.989 37.037 0.00 0.00 0.00 2.29
2026 2316 8.121086 GGCAGATACGGTAGAAATAAAGAAAAC 58.879 37.037 0.00 0.00 0.00 2.43
2027 2317 8.662141 GCAGATACGGTAGAAATAAAGAAAACA 58.338 33.333 0.00 0.00 0.00 2.83
2032 2322 8.173542 ACGGTAGAAATAAAGAAAACATTGGT 57.826 30.769 0.00 0.00 0.00 3.67
2033 2323 8.635328 ACGGTAGAAATAAAGAAAACATTGGTT 58.365 29.630 0.00 0.00 39.43 3.67
2034 2324 9.124807 CGGTAGAAATAAAGAAAACATTGGTTC 57.875 33.333 0.00 0.00 35.82 3.62
2035 2325 9.124807 GGTAGAAATAAAGAAAACATTGGTTCG 57.875 33.333 0.00 0.00 35.82 3.95
2036 2326 9.887406 GTAGAAATAAAGAAAACATTGGTTCGA 57.113 29.630 0.00 0.00 35.82 3.71
2038 2328 8.846211 AGAAATAAAGAAAACATTGGTTCGAGA 58.154 29.630 0.00 0.00 35.82 4.04
2039 2329 9.118236 GAAATAAAGAAAACATTGGTTCGAGAG 57.882 33.333 0.00 0.00 35.82 3.20
2040 2330 4.489679 AAGAAAACATTGGTTCGAGAGC 57.510 40.909 0.00 0.00 35.82 4.09
2041 2331 3.476552 AGAAAACATTGGTTCGAGAGCA 58.523 40.909 0.00 0.00 35.82 4.26
2048 2338 0.874390 TGGTTCGAGAGCAAACATGC 59.126 50.000 0.00 0.00 31.67 4.06
2049 2339 0.169009 GGTTCGAGAGCAAACATGCC 59.831 55.000 0.00 0.00 34.90 4.40
2050 2340 0.874390 GTTCGAGAGCAAACATGCCA 59.126 50.000 0.00 0.00 34.90 4.92
2051 2341 1.266718 GTTCGAGAGCAAACATGCCAA 59.733 47.619 0.00 0.00 34.90 4.52
2052 2342 1.603456 TCGAGAGCAAACATGCCAAA 58.397 45.000 0.00 0.00 34.90 3.28
2053 2343 1.536766 TCGAGAGCAAACATGCCAAAG 59.463 47.619 0.00 0.00 34.90 2.77
2054 2344 1.401931 CGAGAGCAAACATGCCAAAGG 60.402 52.381 0.00 0.00 34.90 3.11
2065 2355 2.429927 GCCAAAGGCCAACAGAACT 58.570 52.632 5.01 0.00 44.06 3.01
2066 2356 0.752658 GCCAAAGGCCAACAGAACTT 59.247 50.000 5.01 0.00 44.06 2.66
2067 2357 1.138859 GCCAAAGGCCAACAGAACTTT 59.861 47.619 5.01 0.00 44.06 2.66
2068 2358 2.825205 CCAAAGGCCAACAGAACTTTG 58.175 47.619 5.01 4.04 45.64 2.77
2069 2359 2.168313 CCAAAGGCCAACAGAACTTTGT 59.832 45.455 5.01 0.00 44.98 2.83
2070 2360 3.189285 CAAAGGCCAACAGAACTTTGTG 58.811 45.455 5.01 0.00 42.78 3.33
2071 2361 2.435372 AGGCCAACAGAACTTTGTGA 57.565 45.000 5.01 0.00 0.00 3.58
2072 2362 2.949447 AGGCCAACAGAACTTTGTGAT 58.051 42.857 5.01 0.00 0.00 3.06
2073 2363 3.299503 AGGCCAACAGAACTTTGTGATT 58.700 40.909 5.01 0.00 0.00 2.57
2074 2364 3.706086 AGGCCAACAGAACTTTGTGATTT 59.294 39.130 5.01 0.00 0.00 2.17
2075 2365 4.051237 GGCCAACAGAACTTTGTGATTTC 58.949 43.478 0.00 0.00 0.00 2.17
2076 2366 4.441356 GGCCAACAGAACTTTGTGATTTCA 60.441 41.667 0.00 0.00 0.00 2.69
2077 2367 5.291971 GCCAACAGAACTTTGTGATTTCAT 58.708 37.500 0.00 0.00 0.00 2.57
2078 2368 5.754890 GCCAACAGAACTTTGTGATTTCATT 59.245 36.000 0.00 0.00 0.00 2.57
2079 2369 6.258507 GCCAACAGAACTTTGTGATTTCATTT 59.741 34.615 0.00 0.00 0.00 2.32
2080 2370 7.517259 GCCAACAGAACTTTGTGATTTCATTTC 60.517 37.037 0.00 0.00 0.00 2.17
2081 2371 7.492020 CCAACAGAACTTTGTGATTTCATTTCA 59.508 33.333 0.00 0.00 0.00 2.69
2082 2372 7.992180 ACAGAACTTTGTGATTTCATTTCAC 57.008 32.000 0.00 0.00 43.04 3.18
2083 2373 7.775120 ACAGAACTTTGTGATTTCATTTCACT 58.225 30.769 5.52 0.00 43.12 3.41
2084 2374 7.703621 ACAGAACTTTGTGATTTCATTTCACTG 59.296 33.333 5.52 0.00 43.12 3.66
2085 2375 7.916977 CAGAACTTTGTGATTTCATTTCACTGA 59.083 33.333 5.52 0.00 43.12 3.41
2086 2376 8.469200 AGAACTTTGTGATTTCATTTCACTGAA 58.531 29.630 5.52 0.00 43.12 3.02
2087 2377 9.252962 GAACTTTGTGATTTCATTTCACTGAAT 57.747 29.630 5.52 0.00 43.12 2.57
2088 2378 9.603921 AACTTTGTGATTTCATTTCACTGAATT 57.396 25.926 5.52 0.00 43.12 2.17
2091 2381 9.695526 TTTGTGATTTCATTTCACTGAATTAGG 57.304 29.630 5.52 0.00 43.12 2.69
2092 2382 8.408043 TGTGATTTCATTTCACTGAATTAGGT 57.592 30.769 5.52 0.00 43.12 3.08
2093 2383 9.513906 TGTGATTTCATTTCACTGAATTAGGTA 57.486 29.630 5.52 0.00 43.12 3.08
2094 2384 9.774742 GTGATTTCATTTCACTGAATTAGGTAC 57.225 33.333 0.00 0.00 40.26 3.34
2095 2385 9.513906 TGATTTCATTTCACTGAATTAGGTACA 57.486 29.630 0.00 0.00 35.20 2.90
2096 2386 9.994432 GATTTCATTTCACTGAATTAGGTACAG 57.006 33.333 0.00 0.00 35.20 2.74
2097 2387 9.739276 ATTTCATTTCACTGAATTAGGTACAGA 57.261 29.630 0.00 0.00 35.20 3.41
2098 2388 9.567776 TTTCATTTCACTGAATTAGGTACAGAA 57.432 29.630 0.00 0.00 35.20 3.02
2099 2389 9.567776 TTCATTTCACTGAATTAGGTACAGAAA 57.432 29.630 0.00 0.00 35.85 2.52
2100 2390 8.999431 TCATTTCACTGAATTAGGTACAGAAAC 58.001 33.333 0.00 0.00 35.85 2.78
2101 2391 8.783093 CATTTCACTGAATTAGGTACAGAAACA 58.217 33.333 0.00 0.00 35.85 2.83
2102 2392 8.740123 TTTCACTGAATTAGGTACAGAAACAA 57.260 30.769 0.00 0.00 35.85 2.83
2103 2393 7.962964 TCACTGAATTAGGTACAGAAACAAG 57.037 36.000 0.00 0.00 35.85 3.16
2104 2394 6.934645 TCACTGAATTAGGTACAGAAACAAGG 59.065 38.462 0.00 0.00 35.85 3.61
2105 2395 6.710744 CACTGAATTAGGTACAGAAACAAGGT 59.289 38.462 0.00 0.00 35.85 3.50
2106 2396 6.710744 ACTGAATTAGGTACAGAAACAAGGTG 59.289 38.462 0.00 0.00 35.85 4.00
2107 2397 6.833041 TGAATTAGGTACAGAAACAAGGTGA 58.167 36.000 0.00 0.00 0.00 4.02
2108 2398 7.284074 TGAATTAGGTACAGAAACAAGGTGAA 58.716 34.615 0.00 0.00 0.00 3.18
2109 2399 7.776030 TGAATTAGGTACAGAAACAAGGTGAAA 59.224 33.333 0.00 0.00 0.00 2.69
2110 2400 7.745620 ATTAGGTACAGAAACAAGGTGAAAG 57.254 36.000 0.00 0.00 0.00 2.62
2111 2401 5.367945 AGGTACAGAAACAAGGTGAAAGA 57.632 39.130 0.00 0.00 0.00 2.52
2112 2402 5.368989 AGGTACAGAAACAAGGTGAAAGAG 58.631 41.667 0.00 0.00 0.00 2.85
2113 2403 5.130477 AGGTACAGAAACAAGGTGAAAGAGA 59.870 40.000 0.00 0.00 0.00 3.10
2114 2404 5.467063 GGTACAGAAACAAGGTGAAAGAGAG 59.533 44.000 0.00 0.00 0.00 3.20
2115 2405 5.359194 ACAGAAACAAGGTGAAAGAGAGA 57.641 39.130 0.00 0.00 0.00 3.10
2116 2406 5.745227 ACAGAAACAAGGTGAAAGAGAGAA 58.255 37.500 0.00 0.00 0.00 2.87
2117 2407 6.180472 ACAGAAACAAGGTGAAAGAGAGAAA 58.820 36.000 0.00 0.00 0.00 2.52
2118 2408 6.317391 ACAGAAACAAGGTGAAAGAGAGAAAG 59.683 38.462 0.00 0.00 0.00 2.62
2119 2409 5.825151 AGAAACAAGGTGAAAGAGAGAAAGG 59.175 40.000 0.00 0.00 0.00 3.11
2120 2410 5.373812 AACAAGGTGAAAGAGAGAAAGGA 57.626 39.130 0.00 0.00 0.00 3.36
2121 2411 4.967036 ACAAGGTGAAAGAGAGAAAGGAG 58.033 43.478 0.00 0.00 0.00 3.69
2122 2412 4.410555 ACAAGGTGAAAGAGAGAAAGGAGT 59.589 41.667 0.00 0.00 0.00 3.85
2123 2413 5.104318 ACAAGGTGAAAGAGAGAAAGGAGTT 60.104 40.000 0.00 0.00 0.00 3.01
2124 2414 5.638530 AGGTGAAAGAGAGAAAGGAGTTT 57.361 39.130 0.00 0.00 0.00 2.66
2125 2415 5.372373 AGGTGAAAGAGAGAAAGGAGTTTG 58.628 41.667 0.00 0.00 0.00 2.93
2126 2416 4.023622 GGTGAAAGAGAGAAAGGAGTTTGC 60.024 45.833 0.00 0.00 0.00 3.68
2127 2417 4.819088 GTGAAAGAGAGAAAGGAGTTTGCT 59.181 41.667 0.00 0.00 0.00 3.91
2128 2418 5.298026 GTGAAAGAGAGAAAGGAGTTTGCTT 59.702 40.000 0.00 0.00 0.00 3.91
2129 2419 5.529060 TGAAAGAGAGAAAGGAGTTTGCTTC 59.471 40.000 0.00 0.00 0.00 3.86
2130 2420 4.972751 AGAGAGAAAGGAGTTTGCTTCT 57.027 40.909 0.00 0.00 29.98 2.85
2131 2421 5.303259 AGAGAGAAAGGAGTTTGCTTCTT 57.697 39.130 0.00 0.00 42.20 2.52
2132 2422 5.304778 AGAGAGAAAGGAGTTTGCTTCTTC 58.695 41.667 0.00 0.00 39.57 2.87
2133 2423 5.071653 AGAGAGAAAGGAGTTTGCTTCTTCT 59.928 40.000 0.00 0.00 39.57 2.85
2134 2424 5.304778 AGAGAAAGGAGTTTGCTTCTTCTC 58.695 41.667 0.00 0.00 39.57 2.87
2135 2425 5.071653 AGAGAAAGGAGTTTGCTTCTTCTCT 59.928 40.000 8.05 8.05 39.57 3.10
2136 2426 5.689835 AGAAAGGAGTTTGCTTCTTCTCTT 58.310 37.500 0.00 0.00 39.57 2.85
2137 2427 6.831976 AGAAAGGAGTTTGCTTCTTCTCTTA 58.168 36.000 0.00 0.00 39.57 2.10
2138 2428 7.457561 AGAAAGGAGTTTGCTTCTTCTCTTAT 58.542 34.615 0.00 0.00 39.57 1.73
2139 2429 7.606073 AGAAAGGAGTTTGCTTCTTCTCTTATC 59.394 37.037 0.00 0.00 39.57 1.75
2140 2430 5.415221 AGGAGTTTGCTTCTTCTCTTATCG 58.585 41.667 0.00 0.00 0.00 2.92
2141 2431 4.568760 GGAGTTTGCTTCTTCTCTTATCGG 59.431 45.833 0.00 0.00 0.00 4.18
2142 2432 3.935828 AGTTTGCTTCTTCTCTTATCGGC 59.064 43.478 0.00 0.00 0.00 5.54
2143 2433 3.895232 TTGCTTCTTCTCTTATCGGCT 57.105 42.857 0.00 0.00 0.00 5.52
2144 2434 3.444703 TGCTTCTTCTCTTATCGGCTC 57.555 47.619 0.00 0.00 0.00 4.70
2145 2435 2.760650 TGCTTCTTCTCTTATCGGCTCA 59.239 45.455 0.00 0.00 0.00 4.26
2146 2436 3.386078 TGCTTCTTCTCTTATCGGCTCAT 59.614 43.478 0.00 0.00 0.00 2.90
2147 2437 4.141846 TGCTTCTTCTCTTATCGGCTCATT 60.142 41.667 0.00 0.00 0.00 2.57
2148 2438 4.813697 GCTTCTTCTCTTATCGGCTCATTT 59.186 41.667 0.00 0.00 0.00 2.32
2149 2439 5.277250 GCTTCTTCTCTTATCGGCTCATTTG 60.277 44.000 0.00 0.00 0.00 2.32
2150 2440 4.697514 TCTTCTCTTATCGGCTCATTTGG 58.302 43.478 0.00 0.00 0.00 3.28
2151 2441 4.162320 TCTTCTCTTATCGGCTCATTTGGT 59.838 41.667 0.00 0.00 0.00 3.67
2152 2442 4.487714 TCTCTTATCGGCTCATTTGGTT 57.512 40.909 0.00 0.00 0.00 3.67
2153 2443 4.843728 TCTCTTATCGGCTCATTTGGTTT 58.156 39.130 0.00 0.00 0.00 3.27
2154 2444 4.876107 TCTCTTATCGGCTCATTTGGTTTC 59.124 41.667 0.00 0.00 0.00 2.78
2155 2445 4.584874 TCTTATCGGCTCATTTGGTTTCA 58.415 39.130 0.00 0.00 0.00 2.69
2156 2446 4.635765 TCTTATCGGCTCATTTGGTTTCAG 59.364 41.667 0.00 0.00 0.00 3.02
2157 2447 1.533625 TCGGCTCATTTGGTTTCAGG 58.466 50.000 0.00 0.00 0.00 3.86
2158 2448 0.527565 CGGCTCATTTGGTTTCAGGG 59.472 55.000 0.00 0.00 0.00 4.45
2159 2449 1.632589 GGCTCATTTGGTTTCAGGGT 58.367 50.000 0.00 0.00 0.00 4.34
2160 2450 1.546029 GGCTCATTTGGTTTCAGGGTC 59.454 52.381 0.00 0.00 0.00 4.46
2161 2451 2.519013 GCTCATTTGGTTTCAGGGTCT 58.481 47.619 0.00 0.00 0.00 3.85
2162 2452 2.489722 GCTCATTTGGTTTCAGGGTCTC 59.510 50.000 0.00 0.00 0.00 3.36
2163 2453 3.084786 CTCATTTGGTTTCAGGGTCTCC 58.915 50.000 0.00 0.00 0.00 3.71
2164 2454 2.171003 CATTTGGTTTCAGGGTCTCCC 58.829 52.381 0.00 0.00 45.90 4.30
2180 2470 4.499116 CCCCGGGGATCCTGACCT 62.499 72.222 38.41 0.00 37.50 3.85
2181 2471 2.366972 CCCGGGGATCCTGACCTT 60.367 66.667 14.71 0.00 29.82 3.50
2182 2472 2.001269 CCCGGGGATCCTGACCTTT 61.001 63.158 14.71 0.00 29.82 3.11
2183 2473 1.571773 CCCGGGGATCCTGACCTTTT 61.572 60.000 14.71 0.00 29.82 2.27
2184 2474 0.331616 CCGGGGATCCTGACCTTTTT 59.668 55.000 12.58 0.00 29.82 1.94
2185 2475 1.682087 CCGGGGATCCTGACCTTTTTC 60.682 57.143 12.58 0.00 29.82 2.29
2186 2476 1.682087 CGGGGATCCTGACCTTTTTCC 60.682 57.143 12.58 0.00 29.82 3.13
2187 2477 1.682087 GGGGATCCTGACCTTTTTCCG 60.682 57.143 12.58 0.00 0.00 4.30
2188 2478 1.682087 GGGATCCTGACCTTTTTCCGG 60.682 57.143 12.58 0.00 0.00 5.14
2189 2479 1.004394 GGATCCTGACCTTTTTCCGGT 59.996 52.381 3.84 0.00 37.50 5.28
2190 2480 2.084546 GATCCTGACCTTTTTCCGGTG 58.915 52.381 0.00 0.00 34.19 4.94
2191 2481 0.536460 TCCTGACCTTTTTCCGGTGC 60.536 55.000 0.00 0.00 34.19 5.01
2192 2482 1.574428 CTGACCTTTTTCCGGTGCG 59.426 57.895 0.00 0.00 34.19 5.34
2193 2483 1.153127 TGACCTTTTTCCGGTGCGT 60.153 52.632 0.00 0.00 34.19 5.24
2194 2484 1.281656 GACCTTTTTCCGGTGCGTG 59.718 57.895 0.00 0.00 34.19 5.34
2195 2485 1.153127 ACCTTTTTCCGGTGCGTGA 60.153 52.632 0.00 0.00 32.41 4.35
2196 2486 0.748729 ACCTTTTTCCGGTGCGTGAA 60.749 50.000 0.00 0.00 32.41 3.18
2197 2487 0.382515 CCTTTTTCCGGTGCGTGAAA 59.617 50.000 0.00 0.00 0.00 2.69
2198 2488 1.202313 CCTTTTTCCGGTGCGTGAAAA 60.202 47.619 0.00 0.00 35.77 2.29
2199 2489 1.849829 CTTTTTCCGGTGCGTGAAAAC 59.150 47.619 0.00 0.00 36.55 2.43
2200 2490 0.100861 TTTTCCGGTGCGTGAAAACC 59.899 50.000 0.00 0.00 34.17 3.27
2201 2491 1.030488 TTTCCGGTGCGTGAAAACCA 61.030 50.000 0.00 0.00 36.14 3.67
2202 2492 1.716826 TTCCGGTGCGTGAAAACCAC 61.717 55.000 0.00 0.00 42.30 4.16
2212 2502 3.537793 GTGAAAACCACGTGGAATCTC 57.462 47.619 40.21 26.83 38.94 2.75
2213 2503 3.139077 GTGAAAACCACGTGGAATCTCT 58.861 45.455 40.21 14.91 38.94 3.10
2214 2504 3.058914 GTGAAAACCACGTGGAATCTCTG 60.059 47.826 40.21 12.15 38.94 3.35
2215 2505 2.185004 AAACCACGTGGAATCTCTGG 57.815 50.000 40.21 11.70 38.94 3.86
2216 2506 0.321653 AACCACGTGGAATCTCTGGC 60.322 55.000 40.21 0.00 38.94 4.85
2217 2507 1.450312 CCACGTGGAATCTCTGGCC 60.450 63.158 31.31 0.00 37.39 5.36
2218 2508 1.296392 CACGTGGAATCTCTGGCCA 59.704 57.895 7.95 4.71 0.00 5.36
2219 2509 0.742281 CACGTGGAATCTCTGGCCAG 60.742 60.000 27.87 27.87 31.18 4.85
2220 2510 1.153289 CGTGGAATCTCTGGCCAGG 60.153 63.158 32.23 22.04 31.18 4.45
2221 2511 1.225704 GTGGAATCTCTGGCCAGGG 59.774 63.158 32.23 30.27 31.18 4.45
2222 2512 1.082766 TGGAATCTCTGGCCAGGGA 59.917 57.895 37.04 37.04 43.04 4.20
2223 2513 0.984961 TGGAATCTCTGGCCAGGGAG 60.985 60.000 37.32 25.81 41.98 4.30
2224 2514 0.692419 GGAATCTCTGGCCAGGGAGA 60.692 60.000 37.32 29.75 41.98 3.71
2225 2515 1.207791 GAATCTCTGGCCAGGGAGAA 58.792 55.000 37.32 18.23 41.98 2.87
2226 2516 0.915364 AATCTCTGGCCAGGGAGAAC 59.085 55.000 37.32 0.00 41.98 3.01
2227 2517 0.985490 ATCTCTGGCCAGGGAGAACC 60.985 60.000 37.32 0.00 41.98 3.62
2228 2518 1.920325 CTCTGGCCAGGGAGAACCA 60.920 63.158 30.13 6.56 43.89 3.67
2229 2519 2.673523 CTGGCCAGGGAGAACCAG 59.326 66.667 26.14 0.00 43.45 4.00
2230 2520 3.635268 CTGGCCAGGGAGAACCAGC 62.635 68.421 26.14 0.00 42.96 4.85
2231 2521 4.785453 GGCCAGGGAGAACCAGCG 62.785 72.222 0.00 0.00 43.89 5.18
2233 2523 4.785453 CCAGGGAGAACCAGCGCC 62.785 72.222 2.29 0.00 43.89 6.53
2234 2524 4.020617 CAGGGAGAACCAGCGCCA 62.021 66.667 2.29 0.00 43.89 5.69
2235 2525 4.021925 AGGGAGAACCAGCGCCAC 62.022 66.667 2.29 0.00 43.89 5.01
2236 2526 4.329545 GGGAGAACCAGCGCCACA 62.330 66.667 2.29 0.00 39.85 4.17
2237 2527 2.045926 GGAGAACCAGCGCCACAT 60.046 61.111 2.29 0.00 35.97 3.21
2238 2528 1.675641 GGAGAACCAGCGCCACATT 60.676 57.895 2.29 0.00 35.97 2.71
2239 2529 1.244019 GGAGAACCAGCGCCACATTT 61.244 55.000 2.29 0.00 35.97 2.32
2240 2530 0.109597 GAGAACCAGCGCCACATTTG 60.110 55.000 2.29 0.00 0.00 2.32
2250 2540 4.685447 CACATTTGGACGACCCGA 57.315 55.556 0.34 0.00 37.93 5.14
2251 2541 3.153024 CACATTTGGACGACCCGAT 57.847 52.632 0.34 0.00 37.93 4.18
2252 2542 1.006832 CACATTTGGACGACCCGATC 58.993 55.000 0.34 0.00 37.93 3.69
2253 2543 0.107848 ACATTTGGACGACCCGATCC 60.108 55.000 0.34 0.00 37.93 3.36
2254 2544 0.107897 CATTTGGACGACCCGATCCA 60.108 55.000 0.34 0.00 43.42 3.41
2255 2545 0.837272 ATTTGGACGACCCGATCCAT 59.163 50.000 0.34 0.00 44.49 3.41
2256 2546 0.107897 TTTGGACGACCCGATCCATG 60.108 55.000 0.34 0.00 44.49 3.66
2257 2547 1.966901 TTGGACGACCCGATCCATGG 61.967 60.000 4.97 4.97 44.49 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
141 146 7.229306 GGAGAAAATGACATATCACAATGCCTA 59.771 37.037 0.00 0.00 37.79 3.93
174 179 5.058490 ACTCATTTGAAAAACCCATTGCAG 58.942 37.500 0.00 0.00 0.00 4.41
176 181 5.759763 AGAACTCATTTGAAAAACCCATTGC 59.240 36.000 0.00 0.00 0.00 3.56
179 184 7.123355 TCAAGAACTCATTTGAAAAACCCAT 57.877 32.000 0.00 0.00 30.84 4.00
193 199 6.413892 TGTACAATATGCCATCAAGAACTCA 58.586 36.000 0.00 0.00 0.00 3.41
241 247 3.587061 TGAGTAGCCTCCTCCAAAAATCA 59.413 43.478 0.00 0.00 36.86 2.57
259 280 7.698506 AAACATCATCATCAACATCTTGAGT 57.301 32.000 0.00 0.00 39.83 3.41
351 390 1.893137 GTTGGTTTTCCTAAGCAGGGG 59.107 52.381 0.00 0.00 42.87 4.79
394 434 3.231965 CGTCTGTTATATTAGGACGCGG 58.768 50.000 12.47 0.00 41.99 6.46
540 586 4.279922 GCGGGGTATAGCCATTTGTTATTT 59.720 41.667 22.07 0.00 39.65 1.40
594 640 1.675552 AGTTACGCTGTTGTTTGGCT 58.324 45.000 0.00 0.00 0.00 4.75
597 643 6.129820 CGTATTCAAAGTTACGCTGTTGTTTG 60.130 38.462 0.00 0.00 35.34 2.93
646 697 4.995487 AGTCAAGTGGTCCGTATTCTTTTC 59.005 41.667 0.00 0.00 0.00 2.29
647 698 4.969484 AGTCAAGTGGTCCGTATTCTTTT 58.031 39.130 0.00 0.00 0.00 2.27
648 699 4.618920 AGTCAAGTGGTCCGTATTCTTT 57.381 40.909 0.00 0.00 0.00 2.52
649 700 4.039973 TCAAGTCAAGTGGTCCGTATTCTT 59.960 41.667 0.00 0.00 0.00 2.52
650 701 3.576982 TCAAGTCAAGTGGTCCGTATTCT 59.423 43.478 0.00 0.00 0.00 2.40
651 702 3.678548 GTCAAGTCAAGTGGTCCGTATTC 59.321 47.826 0.00 0.00 0.00 1.75
691 751 0.110486 AAGATCAGTGGCCAACCGTT 59.890 50.000 7.24 0.00 39.70 4.44
693 753 1.656652 CTAAGATCAGTGGCCAACCG 58.343 55.000 7.24 0.00 39.70 4.44
720 780 9.988350 TTTTATTTCTAATCAGCGTGATCTTTC 57.012 29.630 0.00 0.00 35.76 2.62
747 807 7.211573 TCTGGTGTAGAAACGAAATCTAAACA 58.788 34.615 14.55 4.83 38.74 2.83
748 808 7.647907 TCTGGTGTAGAAACGAAATCTAAAC 57.352 36.000 0.00 0.00 37.04 2.01
750 810 6.367969 GCTTCTGGTGTAGAAACGAAATCTAA 59.632 38.462 0.00 0.00 44.47 2.10
752 812 4.691216 GCTTCTGGTGTAGAAACGAAATCT 59.309 41.667 0.00 0.00 44.47 2.40
855 915 9.787532 TGCCGAAAAGATGAAAAAGATTAATAG 57.212 29.630 0.00 0.00 0.00 1.73
859 919 6.531240 GCATGCCGAAAAGATGAAAAAGATTA 59.469 34.615 6.36 0.00 0.00 1.75
865 925 2.298446 TGGCATGCCGAAAAGATGAAAA 59.702 40.909 30.87 6.34 39.42 2.29
868 928 1.202114 GTTGGCATGCCGAAAAGATGA 59.798 47.619 28.68 5.81 39.42 2.92
893 1081 3.892918 CTGAACCAGCAGTTTCTCTTG 57.107 47.619 0.00 0.00 39.40 3.02
905 1100 2.667536 ACGCTGCAGCTGAACCAG 60.668 61.111 34.22 19.98 39.32 4.00
920 1118 2.084681 GTTCCAGCGTACCGTGACG 61.085 63.158 0.00 0.00 45.70 4.35
937 1136 2.367567 TCGCTAGTGTTTTCCTGAAGGT 59.632 45.455 2.66 0.00 36.34 3.50
946 1145 3.139077 CCTGAAGGTTCGCTAGTGTTTT 58.861 45.455 2.66 0.00 0.00 2.43
947 1146 2.767505 CCTGAAGGTTCGCTAGTGTTT 58.232 47.619 2.66 0.00 0.00 2.83
956 1165 0.670546 ACGATGTGCCTGAAGGTTCG 60.671 55.000 0.00 5.20 37.57 3.95
1348 1587 4.036380 CCAAAACAGTTCAGTTCCAGTACC 59.964 45.833 0.00 0.00 0.00 3.34
1361 1601 4.686191 TCATTCCAATGCCAAAACAGTT 57.314 36.364 0.00 0.00 36.36 3.16
1362 1602 4.686191 TTCATTCCAATGCCAAAACAGT 57.314 36.364 0.00 0.00 36.36 3.55
1363 1603 6.563222 AAATTCATTCCAATGCCAAAACAG 57.437 33.333 0.00 0.00 36.36 3.16
1364 1604 6.557291 GAAATTCATTCCAATGCCAAAACA 57.443 33.333 0.00 0.00 36.36 2.83
1381 1627 4.427312 CAGCAATACCAGCAAGGAAATTC 58.573 43.478 1.83 0.00 41.22 2.17
1389 1635 2.025416 ACCATACCAGCAATACCAGCAA 60.025 45.455 0.00 0.00 0.00 3.91
1391 1637 2.158755 AGACCATACCAGCAATACCAGC 60.159 50.000 0.00 0.00 0.00 4.85
1395 1641 7.499232 ACTTATTTGAGACCATACCAGCAATAC 59.501 37.037 0.00 0.00 0.00 1.89
1411 1657 9.976511 AATCATGCATGGATTAACTTATTTGAG 57.023 29.630 25.97 0.00 33.40 3.02
1417 1663 7.774625 TGACAGAATCATGCATGGATTAACTTA 59.225 33.333 25.97 4.08 35.23 2.24
1418 1664 6.604396 TGACAGAATCATGCATGGATTAACTT 59.396 34.615 25.97 8.70 35.23 2.66
1420 1666 6.381481 TGACAGAATCATGCATGGATTAAC 57.619 37.500 25.97 12.59 35.23 2.01
1520 1802 3.211045 TCAAAACTGCCTGGTCAACTAC 58.789 45.455 0.00 0.00 0.00 2.73
1540 1822 7.368480 ACAATTTGCAAAGCCAATTAATCTC 57.632 32.000 18.19 0.00 33.23 2.75
1545 1827 6.162777 GTCCTACAATTTGCAAAGCCAATTA 58.837 36.000 18.19 2.45 33.23 1.40
1548 1830 3.244044 GGTCCTACAATTTGCAAAGCCAA 60.244 43.478 18.19 2.74 0.00 4.52
1554 1836 3.517296 TCCTGGTCCTACAATTTGCAA 57.483 42.857 0.00 0.00 0.00 4.08
1563 1845 1.623811 TGTTCTGCTTCCTGGTCCTAC 59.376 52.381 0.00 0.00 0.00 3.18
1581 1863 3.701542 TGTCGCTGGAATCTAGAAGATGT 59.298 43.478 0.00 0.00 34.65 3.06
1615 1897 5.688807 AGATTTCCCATTAGGATCACACAG 58.311 41.667 0.00 0.00 46.94 3.66
1636 1918 0.400213 AGAACATGGGGCAAACGAGA 59.600 50.000 0.00 0.00 0.00 4.04
1637 1919 1.068333 CAAGAACATGGGGCAAACGAG 60.068 52.381 0.00 0.00 0.00 4.18
1638 1920 0.958091 CAAGAACATGGGGCAAACGA 59.042 50.000 0.00 0.00 0.00 3.85
1639 1921 0.667184 GCAAGAACATGGGGCAAACG 60.667 55.000 0.00 0.00 0.00 3.60
1640 1922 0.667184 CGCAAGAACATGGGGCAAAC 60.667 55.000 0.00 0.00 43.02 2.93
1641 1923 1.664873 CGCAAGAACATGGGGCAAA 59.335 52.632 0.00 0.00 43.02 3.68
1647 1937 1.577328 AAGTCGGCGCAAGAACATGG 61.577 55.000 10.83 0.00 43.02 3.66
1658 1948 0.247974 CTACCGTGAGTAAGTCGGCG 60.248 60.000 0.00 0.00 46.92 6.46
1659 1949 0.525029 GCTACCGTGAGTAAGTCGGC 60.525 60.000 2.72 0.00 46.92 5.54
1692 1982 4.994217 TCTACATCACTCAAATTGCAACGA 59.006 37.500 0.00 0.00 0.00 3.85
1705 1995 8.354711 TGAAGAACTAACATCTCTACATCACT 57.645 34.615 0.00 0.00 0.00 3.41
1734 2024 3.127721 GGCAAGACCTACATTCTTCAAGC 59.872 47.826 0.00 0.00 30.56 4.01
1743 2033 5.380043 CAAATATGAGGGCAAGACCTACAT 58.620 41.667 0.00 3.45 42.10 2.29
1744 2034 4.385199 CCAAATATGAGGGCAAGACCTACA 60.385 45.833 0.00 0.00 42.10 2.74
1745 2035 4.137543 CCAAATATGAGGGCAAGACCTAC 58.862 47.826 0.00 0.00 42.10 3.18
1753 2043 5.912149 AACTATCTCCAAATATGAGGGCA 57.088 39.130 0.00 0.00 0.00 5.36
1754 2044 5.707764 GGAAACTATCTCCAAATATGAGGGC 59.292 44.000 0.00 0.00 32.77 5.19
1755 2045 7.017056 AGAGGAAACTATCTCCAAATATGAGGG 59.983 40.741 0.00 0.00 44.43 4.30
1756 2046 7.972301 AGAGGAAACTATCTCCAAATATGAGG 58.028 38.462 0.00 0.00 44.43 3.86
1770 2060 5.088026 GCCCTACATAGGAGAGGAAACTAT 58.912 45.833 6.52 0.00 46.63 2.12
1771 2061 4.481072 GCCCTACATAGGAGAGGAAACTA 58.519 47.826 6.52 0.00 46.63 2.24
1772 2062 3.310193 GCCCTACATAGGAGAGGAAACT 58.690 50.000 6.52 0.00 46.63 2.66
1773 2063 2.036089 CGCCCTACATAGGAGAGGAAAC 59.964 54.545 6.52 0.00 46.63 2.78
1774 2064 2.317040 CGCCCTACATAGGAGAGGAAA 58.683 52.381 6.52 0.00 46.63 3.13
1775 2065 1.217183 ACGCCCTACATAGGAGAGGAA 59.783 52.381 6.52 0.00 46.63 3.36
1776 2066 0.851469 ACGCCCTACATAGGAGAGGA 59.149 55.000 6.52 0.00 46.63 3.71
1777 2067 1.341531 CAACGCCCTACATAGGAGAGG 59.658 57.143 6.52 0.00 46.63 3.69
1778 2068 2.032620 ACAACGCCCTACATAGGAGAG 58.967 52.381 6.52 1.81 46.63 3.20
1779 2069 2.029623 GACAACGCCCTACATAGGAGA 58.970 52.381 6.52 0.00 46.63 3.71
1780 2070 2.032620 AGACAACGCCCTACATAGGAG 58.967 52.381 6.52 3.11 46.63 3.69
1781 2071 2.154567 AGACAACGCCCTACATAGGA 57.845 50.000 6.52 0.00 46.63 2.94
1782 2072 2.981859 AAGACAACGCCCTACATAGG 57.018 50.000 0.00 0.00 43.25 2.57
1783 2073 4.124851 AGAAAGACAACGCCCTACATAG 57.875 45.455 0.00 0.00 0.00 2.23
1784 2074 4.546829 AAGAAAGACAACGCCCTACATA 57.453 40.909 0.00 0.00 0.00 2.29
1785 2075 3.418684 AAGAAAGACAACGCCCTACAT 57.581 42.857 0.00 0.00 0.00 2.29
1786 2076 2.922740 AAGAAAGACAACGCCCTACA 57.077 45.000 0.00 0.00 0.00 2.74
1787 2077 3.678548 CACTAAGAAAGACAACGCCCTAC 59.321 47.826 0.00 0.00 0.00 3.18
1788 2078 3.306502 CCACTAAGAAAGACAACGCCCTA 60.307 47.826 0.00 0.00 0.00 3.53
1789 2079 2.550208 CCACTAAGAAAGACAACGCCCT 60.550 50.000 0.00 0.00 0.00 5.19
1790 2080 1.804748 CCACTAAGAAAGACAACGCCC 59.195 52.381 0.00 0.00 0.00 6.13
1791 2081 1.804748 CCCACTAAGAAAGACAACGCC 59.195 52.381 0.00 0.00 0.00 5.68
1792 2082 2.479275 GTCCCACTAAGAAAGACAACGC 59.521 50.000 0.00 0.00 0.00 4.84
1793 2083 3.724374 TGTCCCACTAAGAAAGACAACG 58.276 45.455 0.00 0.00 34.68 4.10
1794 2084 6.635030 AAATGTCCCACTAAGAAAGACAAC 57.365 37.500 0.00 0.00 40.56 3.32
1795 2085 7.060421 AGAAAATGTCCCACTAAGAAAGACAA 58.940 34.615 0.00 0.00 40.56 3.18
1796 2086 6.601332 AGAAAATGTCCCACTAAGAAAGACA 58.399 36.000 0.00 0.00 41.35 3.41
1797 2087 7.363431 CAAGAAAATGTCCCACTAAGAAAGAC 58.637 38.462 0.00 0.00 0.00 3.01
1798 2088 6.016276 GCAAGAAAATGTCCCACTAAGAAAGA 60.016 38.462 0.00 0.00 0.00 2.52
1799 2089 6.152379 GCAAGAAAATGTCCCACTAAGAAAG 58.848 40.000 0.00 0.00 0.00 2.62
1800 2090 5.010617 GGCAAGAAAATGTCCCACTAAGAAA 59.989 40.000 0.00 0.00 0.00 2.52
1801 2091 4.522789 GGCAAGAAAATGTCCCACTAAGAA 59.477 41.667 0.00 0.00 0.00 2.52
1802 2092 4.079253 GGCAAGAAAATGTCCCACTAAGA 58.921 43.478 0.00 0.00 0.00 2.10
1803 2093 3.826157 TGGCAAGAAAATGTCCCACTAAG 59.174 43.478 0.00 0.00 0.00 2.18
1804 2094 3.826157 CTGGCAAGAAAATGTCCCACTAA 59.174 43.478 0.00 0.00 0.00 2.24
1805 2095 3.420893 CTGGCAAGAAAATGTCCCACTA 58.579 45.455 0.00 0.00 0.00 2.74
1806 2096 2.242043 CTGGCAAGAAAATGTCCCACT 58.758 47.619 0.00 0.00 0.00 4.00
1807 2097 1.337167 GCTGGCAAGAAAATGTCCCAC 60.337 52.381 0.00 0.00 0.00 4.61
1808 2098 0.968405 GCTGGCAAGAAAATGTCCCA 59.032 50.000 0.00 0.00 0.00 4.37
1809 2099 0.247460 GGCTGGCAAGAAAATGTCCC 59.753 55.000 0.00 0.00 0.00 4.46
1810 2100 0.968405 TGGCTGGCAAGAAAATGTCC 59.032 50.000 0.00 0.00 0.00 4.02
1811 2101 1.067354 CCTGGCTGGCAAGAAAATGTC 60.067 52.381 5.14 0.00 0.00 3.06
1812 2102 0.971386 CCTGGCTGGCAAGAAAATGT 59.029 50.000 5.14 0.00 0.00 2.71
1813 2103 3.826637 CCTGGCTGGCAAGAAAATG 57.173 52.632 5.14 0.00 0.00 2.32
1823 2113 3.677648 GCAACTGTGCCTGGCTGG 61.678 66.667 21.03 11.84 45.68 4.85
1832 2122 0.448990 CATGGGACGATGCAACTGTG 59.551 55.000 0.00 0.00 0.00 3.66
1833 2123 0.036732 ACATGGGACGATGCAACTGT 59.963 50.000 0.00 0.00 0.00 3.55
1834 2124 2.022764 TACATGGGACGATGCAACTG 57.977 50.000 0.00 0.00 0.00 3.16
1835 2125 2.747446 GTTTACATGGGACGATGCAACT 59.253 45.455 0.00 0.00 0.00 3.16
1836 2126 2.475519 CGTTTACATGGGACGATGCAAC 60.476 50.000 10.93 0.00 38.99 4.17
1837 2127 1.735018 CGTTTACATGGGACGATGCAA 59.265 47.619 10.93 0.00 38.99 4.08
1838 2128 1.364721 CGTTTACATGGGACGATGCA 58.635 50.000 10.93 0.00 38.99 3.96
1839 2129 0.027586 GCGTTTACATGGGACGATGC 59.972 55.000 17.97 4.24 38.99 3.91
1840 2130 0.300491 CGCGTTTACATGGGACGATG 59.700 55.000 17.97 8.31 38.99 3.84
1841 2131 0.808453 CCGCGTTTACATGGGACGAT 60.808 55.000 17.97 0.00 38.99 3.73
1842 2132 1.446445 CCGCGTTTACATGGGACGA 60.446 57.895 17.97 0.00 38.99 4.20
1843 2133 3.086309 CCGCGTTTACATGGGACG 58.914 61.111 4.92 11.77 39.61 4.79
1844 2134 2.757056 GGCCGCGTTTACATGGGAC 61.757 63.158 4.92 0.00 0.00 4.46
1845 2135 2.437002 GGCCGCGTTTACATGGGA 60.437 61.111 4.92 0.00 0.00 4.37
1846 2136 2.437716 AGGCCGCGTTTACATGGG 60.438 61.111 4.92 0.00 0.00 4.00
1847 2137 2.791256 CAGGCCGCGTTTACATGG 59.209 61.111 4.92 0.00 0.00 3.66
1848 2138 2.100216 GCAGGCCGCGTTTACATG 59.900 61.111 4.92 0.30 0.00 3.21
1849 2139 3.131478 GGCAGGCCGCGTTTACAT 61.131 61.111 4.92 0.00 43.84 2.29
1861 2151 3.699894 AGAGTGTCCAGCGGCAGG 61.700 66.667 4.84 4.84 0.00 4.85
1862 2152 1.877576 TACAGAGTGTCCAGCGGCAG 61.878 60.000 1.45 0.00 0.00 4.85
1863 2153 1.257750 ATACAGAGTGTCCAGCGGCA 61.258 55.000 1.45 0.00 0.00 5.69
1864 2154 0.108138 AATACAGAGTGTCCAGCGGC 60.108 55.000 0.00 0.00 0.00 6.53
1865 2155 3.735237 ATAATACAGAGTGTCCAGCGG 57.265 47.619 0.00 0.00 0.00 5.52
1866 2156 5.352284 AGAAATAATACAGAGTGTCCAGCG 58.648 41.667 0.00 0.00 0.00 5.18
1867 2157 5.755861 GGAGAAATAATACAGAGTGTCCAGC 59.244 44.000 0.00 0.00 0.00 4.85
1868 2158 7.118496 AGGAGAAATAATACAGAGTGTCCAG 57.882 40.000 0.00 0.00 0.00 3.86
1869 2159 7.496346 AAGGAGAAATAATACAGAGTGTCCA 57.504 36.000 0.00 0.00 0.00 4.02
1870 2160 7.496263 GGAAAGGAGAAATAATACAGAGTGTCC 59.504 40.741 0.00 0.00 0.00 4.02
1871 2161 8.261522 AGGAAAGGAGAAATAATACAGAGTGTC 58.738 37.037 0.00 0.00 0.00 3.67
1872 2162 8.152023 AGGAAAGGAGAAATAATACAGAGTGT 57.848 34.615 0.00 0.00 0.00 3.55
1873 2163 8.482128 AGAGGAAAGGAGAAATAATACAGAGTG 58.518 37.037 0.00 0.00 0.00 3.51
1874 2164 8.616799 AGAGGAAAGGAGAAATAATACAGAGT 57.383 34.615 0.00 0.00 0.00 3.24
1882 2172 9.982651 CGATGTATTAGAGGAAAGGAGAAATAA 57.017 33.333 0.00 0.00 0.00 1.40
1883 2173 8.585881 CCGATGTATTAGAGGAAAGGAGAAATA 58.414 37.037 0.00 0.00 0.00 1.40
1884 2174 7.445945 CCGATGTATTAGAGGAAAGGAGAAAT 58.554 38.462 0.00 0.00 0.00 2.17
1885 2175 6.685620 GCCGATGTATTAGAGGAAAGGAGAAA 60.686 42.308 0.00 0.00 0.00 2.52
1886 2176 5.221461 GCCGATGTATTAGAGGAAAGGAGAA 60.221 44.000 0.00 0.00 0.00 2.87
1887 2177 4.281182 GCCGATGTATTAGAGGAAAGGAGA 59.719 45.833 0.00 0.00 0.00 3.71
1888 2178 4.039245 TGCCGATGTATTAGAGGAAAGGAG 59.961 45.833 0.00 0.00 0.00 3.69
1889 2179 3.964688 TGCCGATGTATTAGAGGAAAGGA 59.035 43.478 0.00 0.00 0.00 3.36
1890 2180 4.058817 GTGCCGATGTATTAGAGGAAAGG 58.941 47.826 0.00 0.00 0.00 3.11
1891 2181 3.736252 CGTGCCGATGTATTAGAGGAAAG 59.264 47.826 0.00 0.00 0.00 2.62
1892 2182 3.713288 CGTGCCGATGTATTAGAGGAAA 58.287 45.455 0.00 0.00 0.00 3.13
1893 2183 2.545113 GCGTGCCGATGTATTAGAGGAA 60.545 50.000 0.00 0.00 0.00 3.36
1894 2184 1.000607 GCGTGCCGATGTATTAGAGGA 60.001 52.381 0.00 0.00 0.00 3.71
1895 2185 1.269569 TGCGTGCCGATGTATTAGAGG 60.270 52.381 0.00 0.00 0.00 3.69
1896 2186 2.134201 TGCGTGCCGATGTATTAGAG 57.866 50.000 0.00 0.00 0.00 2.43
1897 2187 2.469826 CTTGCGTGCCGATGTATTAGA 58.530 47.619 0.00 0.00 0.00 2.10
1898 2188 1.070577 GCTTGCGTGCCGATGTATTAG 60.071 52.381 0.00 0.00 0.00 1.73
1899 2189 0.934496 GCTTGCGTGCCGATGTATTA 59.066 50.000 0.00 0.00 0.00 0.98
1900 2190 1.714899 GGCTTGCGTGCCGATGTATT 61.715 55.000 4.01 0.00 43.74 1.89
1901 2191 2.180204 GGCTTGCGTGCCGATGTAT 61.180 57.895 4.01 0.00 43.74 2.29
1902 2192 2.817834 GGCTTGCGTGCCGATGTA 60.818 61.111 4.01 0.00 43.74 2.29
1913 2203 1.661509 GGACACGCAAAAGGCTTGC 60.662 57.895 0.00 0.00 45.05 4.01
1914 2204 1.370414 CGGACACGCAAAAGGCTTG 60.370 57.895 0.00 0.00 46.47 4.01
1915 2205 3.030652 CGGACACGCAAAAGGCTT 58.969 55.556 0.00 0.00 41.67 4.35
1946 2236 0.544595 AGGTACGAAGGGCAAGACCT 60.545 55.000 0.00 0.00 44.56 3.85
1947 2237 1.136500 CTAGGTACGAAGGGCAAGACC 59.864 57.143 0.00 0.00 37.93 3.85
1948 2238 2.097825 TCTAGGTACGAAGGGCAAGAC 58.902 52.381 0.00 0.00 0.00 3.01
1949 2239 2.097825 GTCTAGGTACGAAGGGCAAGA 58.902 52.381 0.00 0.00 0.00 3.02
1950 2240 2.100989 AGTCTAGGTACGAAGGGCAAG 58.899 52.381 0.00 0.00 0.00 4.01
1951 2241 2.226962 AGTCTAGGTACGAAGGGCAA 57.773 50.000 0.00 0.00 0.00 4.52
1952 2242 1.822990 CAAGTCTAGGTACGAAGGGCA 59.177 52.381 0.00 0.00 0.00 5.36
1953 2243 1.823610 ACAAGTCTAGGTACGAAGGGC 59.176 52.381 0.00 0.00 0.00 5.19
1954 2244 4.532314 AAACAAGTCTAGGTACGAAGGG 57.468 45.455 0.00 0.00 0.00 3.95
1955 2245 4.689345 CCAAAACAAGTCTAGGTACGAAGG 59.311 45.833 0.00 0.00 0.00 3.46
1956 2246 5.295152 ACCAAAACAAGTCTAGGTACGAAG 58.705 41.667 0.00 0.00 0.00 3.79
1957 2247 5.280654 ACCAAAACAAGTCTAGGTACGAA 57.719 39.130 0.00 0.00 0.00 3.85
1958 2248 4.557296 CGACCAAAACAAGTCTAGGTACGA 60.557 45.833 0.00 0.00 0.00 3.43
1959 2249 3.671928 CGACCAAAACAAGTCTAGGTACG 59.328 47.826 0.00 0.00 0.00 3.67
1960 2250 4.874970 TCGACCAAAACAAGTCTAGGTAC 58.125 43.478 0.00 0.00 0.00 3.34
1961 2251 4.586001 ACTCGACCAAAACAAGTCTAGGTA 59.414 41.667 0.00 0.00 31.84 3.08
1962 2252 3.387050 ACTCGACCAAAACAAGTCTAGGT 59.613 43.478 0.00 0.00 31.84 3.08
1963 2253 3.741344 CACTCGACCAAAACAAGTCTAGG 59.259 47.826 0.00 0.00 31.84 3.02
1964 2254 3.184581 GCACTCGACCAAAACAAGTCTAG 59.815 47.826 0.00 0.00 33.33 2.43
1965 2255 3.128349 GCACTCGACCAAAACAAGTCTA 58.872 45.455 0.00 0.00 0.00 2.59
1966 2256 1.940613 GCACTCGACCAAAACAAGTCT 59.059 47.619 0.00 0.00 0.00 3.24
1967 2257 1.940613 AGCACTCGACCAAAACAAGTC 59.059 47.619 0.00 0.00 0.00 3.01
1968 2258 2.038387 AGCACTCGACCAAAACAAGT 57.962 45.000 0.00 0.00 0.00 3.16
1969 2259 3.420839 AAAGCACTCGACCAAAACAAG 57.579 42.857 0.00 0.00 0.00 3.16
1970 2260 4.791411 GCATAAAGCACTCGACCAAAACAA 60.791 41.667 0.00 0.00 44.79 2.83
1971 2261 3.304391 GCATAAAGCACTCGACCAAAACA 60.304 43.478 0.00 0.00 44.79 2.83
1972 2262 3.234386 GCATAAAGCACTCGACCAAAAC 58.766 45.455 0.00 0.00 44.79 2.43
1973 2263 3.552604 GCATAAAGCACTCGACCAAAA 57.447 42.857 0.00 0.00 44.79 2.44
1985 2275 1.718757 CTGCCGACCCTGCATAAAGC 61.719 60.000 0.00 0.00 45.96 3.51
1986 2276 0.107703 TCTGCCGACCCTGCATAAAG 60.108 55.000 0.00 0.00 38.22 1.85
1987 2277 0.546122 ATCTGCCGACCCTGCATAAA 59.454 50.000 0.00 0.00 38.22 1.40
1988 2278 1.070134 GTATCTGCCGACCCTGCATAA 59.930 52.381 0.00 0.00 38.22 1.90
1989 2279 0.679505 GTATCTGCCGACCCTGCATA 59.320 55.000 0.00 0.00 38.22 3.14
1990 2280 1.447643 GTATCTGCCGACCCTGCAT 59.552 57.895 0.00 0.00 38.22 3.96
1991 2281 2.900273 GTATCTGCCGACCCTGCA 59.100 61.111 0.00 0.00 37.17 4.41
1992 2282 2.279517 CGTATCTGCCGACCCTGC 60.280 66.667 0.00 0.00 0.00 4.85
1993 2283 1.105167 TACCGTATCTGCCGACCCTG 61.105 60.000 0.00 0.00 0.00 4.45
1994 2284 0.822532 CTACCGTATCTGCCGACCCT 60.823 60.000 0.00 0.00 0.00 4.34
1995 2285 0.820891 TCTACCGTATCTGCCGACCC 60.821 60.000 0.00 0.00 0.00 4.46
1996 2286 1.027357 TTCTACCGTATCTGCCGACC 58.973 55.000 0.00 0.00 0.00 4.79
1997 2287 2.857592 TTTCTACCGTATCTGCCGAC 57.142 50.000 0.00 0.00 0.00 4.79
1998 2288 5.300034 TCTTTATTTCTACCGTATCTGCCGA 59.700 40.000 0.00 0.00 0.00 5.54
1999 2289 5.526115 TCTTTATTTCTACCGTATCTGCCG 58.474 41.667 0.00 0.00 0.00 5.69
2000 2290 7.781548 TTTCTTTATTTCTACCGTATCTGCC 57.218 36.000 0.00 0.00 0.00 4.85
2001 2291 8.662141 TGTTTTCTTTATTTCTACCGTATCTGC 58.338 33.333 0.00 0.00 0.00 4.26
2006 2296 9.287373 ACCAATGTTTTCTTTATTTCTACCGTA 57.713 29.630 0.00 0.00 0.00 4.02
2007 2297 8.173542 ACCAATGTTTTCTTTATTTCTACCGT 57.826 30.769 0.00 0.00 0.00 4.83
2008 2298 9.124807 GAACCAATGTTTTCTTTATTTCTACCG 57.875 33.333 0.00 0.00 33.97 4.02
2009 2299 9.124807 CGAACCAATGTTTTCTTTATTTCTACC 57.875 33.333 0.00 0.00 33.97 3.18
2010 2300 9.887406 TCGAACCAATGTTTTCTTTATTTCTAC 57.113 29.630 0.00 0.00 33.97 2.59
2012 2302 8.846211 TCTCGAACCAATGTTTTCTTTATTTCT 58.154 29.630 0.00 0.00 33.97 2.52
2013 2303 9.118236 CTCTCGAACCAATGTTTTCTTTATTTC 57.882 33.333 0.00 0.00 33.97 2.17
2014 2304 7.595130 GCTCTCGAACCAATGTTTTCTTTATTT 59.405 33.333 0.00 0.00 33.97 1.40
2015 2305 7.084486 GCTCTCGAACCAATGTTTTCTTTATT 58.916 34.615 0.00 0.00 33.97 1.40
2016 2306 6.206634 TGCTCTCGAACCAATGTTTTCTTTAT 59.793 34.615 0.00 0.00 33.97 1.40
2017 2307 5.529430 TGCTCTCGAACCAATGTTTTCTTTA 59.471 36.000 0.00 0.00 33.97 1.85
2018 2308 4.338118 TGCTCTCGAACCAATGTTTTCTTT 59.662 37.500 0.00 0.00 33.97 2.52
2019 2309 3.882888 TGCTCTCGAACCAATGTTTTCTT 59.117 39.130 0.00 0.00 33.97 2.52
2020 2310 3.476552 TGCTCTCGAACCAATGTTTTCT 58.523 40.909 0.00 0.00 33.97 2.52
2021 2311 3.896648 TGCTCTCGAACCAATGTTTTC 57.103 42.857 0.00 0.00 33.97 2.29
2022 2312 4.142271 TGTTTGCTCTCGAACCAATGTTTT 60.142 37.500 0.00 0.00 36.05 2.43
2023 2313 3.380004 TGTTTGCTCTCGAACCAATGTTT 59.620 39.130 0.00 0.00 36.05 2.83
2024 2314 2.948979 TGTTTGCTCTCGAACCAATGTT 59.051 40.909 0.00 0.00 36.05 2.71
2025 2315 2.571212 TGTTTGCTCTCGAACCAATGT 58.429 42.857 0.00 0.00 36.05 2.71
2026 2316 3.495193 CATGTTTGCTCTCGAACCAATG 58.505 45.455 0.00 0.00 36.05 2.82
2027 2317 2.095059 GCATGTTTGCTCTCGAACCAAT 60.095 45.455 0.00 0.00 45.77 3.16
2028 2318 1.266718 GCATGTTTGCTCTCGAACCAA 59.733 47.619 0.00 0.00 45.77 3.67
2029 2319 0.874390 GCATGTTTGCTCTCGAACCA 59.126 50.000 0.00 0.00 45.77 3.67
2030 2320 3.683581 GCATGTTTGCTCTCGAACC 57.316 52.632 0.00 0.00 45.77 3.62
2048 2338 2.168313 ACAAAGTTCTGTTGGCCTTTGG 59.832 45.455 3.32 0.00 44.98 3.28
2049 2339 3.119173 TCACAAAGTTCTGTTGGCCTTTG 60.119 43.478 3.32 6.28 45.74 2.77
2050 2340 3.096092 TCACAAAGTTCTGTTGGCCTTT 58.904 40.909 3.32 0.00 0.00 3.11
2051 2341 2.733956 TCACAAAGTTCTGTTGGCCTT 58.266 42.857 3.32 0.00 0.00 4.35
2052 2342 2.435372 TCACAAAGTTCTGTTGGCCT 57.565 45.000 3.32 0.00 0.00 5.19
2053 2343 3.733443 AATCACAAAGTTCTGTTGGCC 57.267 42.857 0.00 0.00 0.00 5.36
2054 2344 4.681744 TGAAATCACAAAGTTCTGTTGGC 58.318 39.130 0.00 0.00 0.00 4.52
2055 2345 7.492020 TGAAATGAAATCACAAAGTTCTGTTGG 59.508 33.333 0.00 0.00 0.00 3.77
2056 2346 8.323140 GTGAAATGAAATCACAAAGTTCTGTTG 58.677 33.333 2.01 0.00 45.13 3.33
2057 2347 8.411318 GTGAAATGAAATCACAAAGTTCTGTT 57.589 30.769 2.01 0.00 45.13 3.16
2058 2348 7.992180 GTGAAATGAAATCACAAAGTTCTGT 57.008 32.000 2.01 0.00 45.13 3.41
2068 2358 9.774742 GTACCTAATTCAGTGAAATGAAATCAC 57.225 33.333 10.14 0.00 45.94 3.06
2069 2359 9.513906 TGTACCTAATTCAGTGAAATGAAATCA 57.486 29.630 10.14 3.01 42.21 2.57
2070 2360 9.994432 CTGTACCTAATTCAGTGAAATGAAATC 57.006 33.333 10.14 0.48 42.21 2.17
2071 2361 9.739276 TCTGTACCTAATTCAGTGAAATGAAAT 57.261 29.630 10.14 0.00 42.21 2.17
2072 2362 9.567776 TTCTGTACCTAATTCAGTGAAATGAAA 57.432 29.630 10.14 0.00 42.21 2.69
2073 2363 9.567776 TTTCTGTACCTAATTCAGTGAAATGAA 57.432 29.630 10.14 0.00 43.04 2.57
2074 2364 8.999431 GTTTCTGTACCTAATTCAGTGAAATGA 58.001 33.333 10.14 0.00 0.00 2.57
2075 2365 8.783093 TGTTTCTGTACCTAATTCAGTGAAATG 58.217 33.333 10.14 3.15 0.00 2.32
2076 2366 8.918202 TGTTTCTGTACCTAATTCAGTGAAAT 57.082 30.769 10.14 3.88 0.00 2.17
2077 2367 8.740123 TTGTTTCTGTACCTAATTCAGTGAAA 57.260 30.769 10.14 0.00 0.00 2.69
2078 2368 7.444183 CCTTGTTTCTGTACCTAATTCAGTGAA 59.556 37.037 8.27 8.27 0.00 3.18
2079 2369 6.934645 CCTTGTTTCTGTACCTAATTCAGTGA 59.065 38.462 0.00 0.00 0.00 3.41
2080 2370 6.710744 ACCTTGTTTCTGTACCTAATTCAGTG 59.289 38.462 0.00 0.00 0.00 3.66
2081 2371 6.710744 CACCTTGTTTCTGTACCTAATTCAGT 59.289 38.462 0.00 0.00 0.00 3.41
2082 2372 6.934645 TCACCTTGTTTCTGTACCTAATTCAG 59.065 38.462 0.00 0.00 0.00 3.02
2083 2373 6.833041 TCACCTTGTTTCTGTACCTAATTCA 58.167 36.000 0.00 0.00 0.00 2.57
2084 2374 7.739498 TTCACCTTGTTTCTGTACCTAATTC 57.261 36.000 0.00 0.00 0.00 2.17
2085 2375 7.996644 TCTTTCACCTTGTTTCTGTACCTAATT 59.003 33.333 0.00 0.00 0.00 1.40
2086 2376 7.514721 TCTTTCACCTTGTTTCTGTACCTAAT 58.485 34.615 0.00 0.00 0.00 1.73
2087 2377 6.891388 TCTTTCACCTTGTTTCTGTACCTAA 58.109 36.000 0.00 0.00 0.00 2.69
2088 2378 6.325545 TCTCTTTCACCTTGTTTCTGTACCTA 59.674 38.462 0.00 0.00 0.00 3.08
2089 2379 5.130477 TCTCTTTCACCTTGTTTCTGTACCT 59.870 40.000 0.00 0.00 0.00 3.08
2090 2380 5.365619 TCTCTTTCACCTTGTTTCTGTACC 58.634 41.667 0.00 0.00 0.00 3.34
2091 2381 6.281405 TCTCTCTTTCACCTTGTTTCTGTAC 58.719 40.000 0.00 0.00 0.00 2.90
2092 2382 6.479972 TCTCTCTTTCACCTTGTTTCTGTA 57.520 37.500 0.00 0.00 0.00 2.74
2093 2383 5.359194 TCTCTCTTTCACCTTGTTTCTGT 57.641 39.130 0.00 0.00 0.00 3.41
2094 2384 6.238593 CCTTTCTCTCTTTCACCTTGTTTCTG 60.239 42.308 0.00 0.00 0.00 3.02
2095 2385 5.825151 CCTTTCTCTCTTTCACCTTGTTTCT 59.175 40.000 0.00 0.00 0.00 2.52
2096 2386 5.823045 TCCTTTCTCTCTTTCACCTTGTTTC 59.177 40.000 0.00 0.00 0.00 2.78
2097 2387 5.755849 TCCTTTCTCTCTTTCACCTTGTTT 58.244 37.500 0.00 0.00 0.00 2.83
2098 2388 5.104318 ACTCCTTTCTCTCTTTCACCTTGTT 60.104 40.000 0.00 0.00 0.00 2.83
2099 2389 4.410555 ACTCCTTTCTCTCTTTCACCTTGT 59.589 41.667 0.00 0.00 0.00 3.16
2100 2390 4.967036 ACTCCTTTCTCTCTTTCACCTTG 58.033 43.478 0.00 0.00 0.00 3.61
2101 2391 5.638530 AACTCCTTTCTCTCTTTCACCTT 57.361 39.130 0.00 0.00 0.00 3.50
2102 2392 5.372373 CAAACTCCTTTCTCTCTTTCACCT 58.628 41.667 0.00 0.00 0.00 4.00
2103 2393 4.023622 GCAAACTCCTTTCTCTCTTTCACC 60.024 45.833 0.00 0.00 0.00 4.02
2104 2394 4.819088 AGCAAACTCCTTTCTCTCTTTCAC 59.181 41.667 0.00 0.00 0.00 3.18
2105 2395 5.041191 AGCAAACTCCTTTCTCTCTTTCA 57.959 39.130 0.00 0.00 0.00 2.69
2106 2396 5.762711 AGAAGCAAACTCCTTTCTCTCTTTC 59.237 40.000 0.00 0.00 0.00 2.62
2107 2397 5.689835 AGAAGCAAACTCCTTTCTCTCTTT 58.310 37.500 0.00 0.00 0.00 2.52
2108 2398 5.303259 AGAAGCAAACTCCTTTCTCTCTT 57.697 39.130 0.00 0.00 0.00 2.85
2109 2399 4.972751 AGAAGCAAACTCCTTTCTCTCT 57.027 40.909 0.00 0.00 0.00 3.10
2110 2400 5.304778 AGAAGAAGCAAACTCCTTTCTCTC 58.695 41.667 0.00 0.00 0.00 3.20
2111 2401 5.071653 AGAGAAGAAGCAAACTCCTTTCTCT 59.928 40.000 7.76 7.76 39.51 3.10
2112 2402 5.304778 AGAGAAGAAGCAAACTCCTTTCTC 58.695 41.667 3.76 3.76 37.10 2.87
2113 2403 5.303259 AGAGAAGAAGCAAACTCCTTTCT 57.697 39.130 0.00 0.00 0.00 2.52
2114 2404 7.412455 CGATAAGAGAAGAAGCAAACTCCTTTC 60.412 40.741 0.00 0.00 0.00 2.62
2115 2405 6.370166 CGATAAGAGAAGAAGCAAACTCCTTT 59.630 38.462 0.00 0.00 0.00 3.11
2116 2406 5.872070 CGATAAGAGAAGAAGCAAACTCCTT 59.128 40.000 0.00 0.00 0.00 3.36
2117 2407 5.415221 CGATAAGAGAAGAAGCAAACTCCT 58.585 41.667 0.00 0.00 0.00 3.69
2118 2408 4.568760 CCGATAAGAGAAGAAGCAAACTCC 59.431 45.833 0.00 0.00 0.00 3.85
2119 2409 4.033472 GCCGATAAGAGAAGAAGCAAACTC 59.967 45.833 0.00 0.00 0.00 3.01
2120 2410 3.935828 GCCGATAAGAGAAGAAGCAAACT 59.064 43.478 0.00 0.00 0.00 2.66
2121 2411 3.935828 AGCCGATAAGAGAAGAAGCAAAC 59.064 43.478 0.00 0.00 0.00 2.93
2122 2412 4.184629 GAGCCGATAAGAGAAGAAGCAAA 58.815 43.478 0.00 0.00 0.00 3.68
2123 2413 3.195610 TGAGCCGATAAGAGAAGAAGCAA 59.804 43.478 0.00 0.00 0.00 3.91
2124 2414 2.760650 TGAGCCGATAAGAGAAGAAGCA 59.239 45.455 0.00 0.00 0.00 3.91
2125 2415 3.444703 TGAGCCGATAAGAGAAGAAGC 57.555 47.619 0.00 0.00 0.00 3.86
2126 2416 5.236047 CCAAATGAGCCGATAAGAGAAGAAG 59.764 44.000 0.00 0.00 0.00 2.85
2127 2417 5.118990 CCAAATGAGCCGATAAGAGAAGAA 58.881 41.667 0.00 0.00 0.00 2.52
2128 2418 4.162320 ACCAAATGAGCCGATAAGAGAAGA 59.838 41.667 0.00 0.00 0.00 2.87
2129 2419 4.446371 ACCAAATGAGCCGATAAGAGAAG 58.554 43.478 0.00 0.00 0.00 2.85
2130 2420 4.487714 ACCAAATGAGCCGATAAGAGAA 57.512 40.909 0.00 0.00 0.00 2.87
2131 2421 4.487714 AACCAAATGAGCCGATAAGAGA 57.512 40.909 0.00 0.00 0.00 3.10
2132 2422 4.635765 TGAAACCAAATGAGCCGATAAGAG 59.364 41.667 0.00 0.00 0.00 2.85
2133 2423 4.584874 TGAAACCAAATGAGCCGATAAGA 58.415 39.130 0.00 0.00 0.00 2.10
2134 2424 4.201950 CCTGAAACCAAATGAGCCGATAAG 60.202 45.833 0.00 0.00 0.00 1.73
2135 2425 3.694072 CCTGAAACCAAATGAGCCGATAA 59.306 43.478 0.00 0.00 0.00 1.75
2136 2426 3.278574 CCTGAAACCAAATGAGCCGATA 58.721 45.455 0.00 0.00 0.00 2.92
2137 2427 2.094675 CCTGAAACCAAATGAGCCGAT 58.905 47.619 0.00 0.00 0.00 4.18
2138 2428 1.533625 CCTGAAACCAAATGAGCCGA 58.466 50.000 0.00 0.00 0.00 5.54
2139 2429 0.527565 CCCTGAAACCAAATGAGCCG 59.472 55.000 0.00 0.00 0.00 5.52
2140 2430 1.546029 GACCCTGAAACCAAATGAGCC 59.454 52.381 0.00 0.00 0.00 4.70
2141 2431 2.489722 GAGACCCTGAAACCAAATGAGC 59.510 50.000 0.00 0.00 0.00 4.26
2142 2432 3.084786 GGAGACCCTGAAACCAAATGAG 58.915 50.000 0.00 0.00 0.00 2.90
2143 2433 3.154827 GGAGACCCTGAAACCAAATGA 57.845 47.619 0.00 0.00 0.00 2.57
2163 2453 4.499116 AGGTCAGGATCCCCGGGG 62.499 72.222 35.80 35.80 37.58 5.73
2164 2454 1.571773 AAAAGGTCAGGATCCCCGGG 61.572 60.000 15.80 15.80 37.58 5.73
2165 2455 0.331616 AAAAAGGTCAGGATCCCCGG 59.668 55.000 8.55 0.00 37.58 5.73
2166 2456 1.682087 GGAAAAAGGTCAGGATCCCCG 60.682 57.143 8.55 0.00 37.58 5.73
2167 2457 1.682087 CGGAAAAAGGTCAGGATCCCC 60.682 57.143 8.55 2.27 0.00 4.81
2168 2458 1.682087 CCGGAAAAAGGTCAGGATCCC 60.682 57.143 8.55 0.00 35.07 3.85
2169 2459 1.004394 ACCGGAAAAAGGTCAGGATCC 59.996 52.381 9.46 2.48 37.44 3.36
2170 2460 2.084546 CACCGGAAAAAGGTCAGGATC 58.915 52.381 9.46 0.00 40.59 3.36
2171 2461 1.886655 GCACCGGAAAAAGGTCAGGAT 60.887 52.381 9.46 0.00 40.59 3.24
2172 2462 0.536460 GCACCGGAAAAAGGTCAGGA 60.536 55.000 9.46 0.00 40.59 3.86
2173 2463 1.852067 CGCACCGGAAAAAGGTCAGG 61.852 60.000 9.46 0.00 40.59 3.86
2174 2464 1.164041 ACGCACCGGAAAAAGGTCAG 61.164 55.000 9.46 0.00 40.59 3.51
2175 2465 1.153127 ACGCACCGGAAAAAGGTCA 60.153 52.632 9.46 0.00 40.59 4.02
2176 2466 1.161563 TCACGCACCGGAAAAAGGTC 61.162 55.000 9.46 0.00 40.59 3.85
2177 2467 0.748729 TTCACGCACCGGAAAAAGGT 60.749 50.000 9.46 0.00 43.97 3.50
2178 2468 0.382515 TTTCACGCACCGGAAAAAGG 59.617 50.000 9.46 0.00 30.59 3.11
2179 2469 1.849829 GTTTTCACGCACCGGAAAAAG 59.150 47.619 9.46 0.00 42.62 2.27
2180 2470 1.469423 GGTTTTCACGCACCGGAAAAA 60.469 47.619 9.46 2.13 42.62 1.94
2181 2471 0.100861 GGTTTTCACGCACCGGAAAA 59.899 50.000 9.46 0.00 39.82 2.29
2182 2472 1.030488 TGGTTTTCACGCACCGGAAA 61.030 50.000 9.46 0.00 35.60 3.13
2183 2473 1.451567 TGGTTTTCACGCACCGGAA 60.452 52.632 9.46 0.00 35.60 4.30
2184 2474 2.181521 GTGGTTTTCACGCACCGGA 61.182 57.895 9.46 0.00 36.56 5.14
2185 2475 2.330041 GTGGTTTTCACGCACCGG 59.670 61.111 0.00 0.00 36.56 5.28
2192 2482 3.058914 CAGAGATTCCACGTGGTTTTCAC 60.059 47.826 32.74 23.25 42.74 3.18
2193 2483 3.138304 CAGAGATTCCACGTGGTTTTCA 58.862 45.455 32.74 11.90 36.34 2.69
2194 2484 2.484264 CCAGAGATTCCACGTGGTTTTC 59.516 50.000 32.74 25.06 36.34 2.29
2195 2485 2.504367 CCAGAGATTCCACGTGGTTTT 58.496 47.619 32.74 18.94 36.34 2.43
2196 2486 1.882352 GCCAGAGATTCCACGTGGTTT 60.882 52.381 32.74 21.45 36.34 3.27
2197 2487 0.321653 GCCAGAGATTCCACGTGGTT 60.322 55.000 32.74 21.82 36.34 3.67
2198 2488 1.296715 GCCAGAGATTCCACGTGGT 59.703 57.895 32.74 16.38 36.34 4.16
2199 2489 1.450312 GGCCAGAGATTCCACGTGG 60.450 63.158 29.26 29.26 0.00 4.94
2200 2490 0.742281 CTGGCCAGAGATTCCACGTG 60.742 60.000 29.88 9.08 0.00 4.49
2201 2491 1.599047 CTGGCCAGAGATTCCACGT 59.401 57.895 29.88 0.00 0.00 4.49
2202 2492 1.153289 CCTGGCCAGAGATTCCACG 60.153 63.158 34.91 10.00 0.00 4.94
2203 2493 1.225704 CCCTGGCCAGAGATTCCAC 59.774 63.158 34.91 0.00 0.00 4.02
2204 2494 0.984961 CTCCCTGGCCAGAGATTCCA 60.985 60.000 34.91 3.01 31.43 3.53
2205 2495 0.692419 TCTCCCTGGCCAGAGATTCC 60.692 60.000 34.91 0.00 34.23 3.01
2206 2496 1.134250 GTTCTCCCTGGCCAGAGATTC 60.134 57.143 34.91 19.48 38.86 2.52
2207 2497 0.915364 GTTCTCCCTGGCCAGAGATT 59.085 55.000 34.91 0.00 38.86 2.40
2208 2498 0.985490 GGTTCTCCCTGGCCAGAGAT 60.985 60.000 34.91 0.00 38.86 2.75
2209 2499 1.613630 GGTTCTCCCTGGCCAGAGA 60.614 63.158 34.91 26.00 37.36 3.10
2210 2500 1.920325 TGGTTCTCCCTGGCCAGAG 60.920 63.158 34.91 22.73 0.00 3.35
2211 2501 2.206900 TGGTTCTCCCTGGCCAGA 59.793 61.111 34.91 14.80 0.00 3.86
2212 2502 2.673523 CTGGTTCTCCCTGGCCAG 59.326 66.667 26.87 26.87 41.89 4.85
2213 2503 3.650950 GCTGGTTCTCCCTGGCCA 61.651 66.667 4.71 4.71 32.93 5.36
2214 2504 4.785453 CGCTGGTTCTCCCTGGCC 62.785 72.222 0.00 0.00 32.93 5.36
2216 2506 4.785453 GGCGCTGGTTCTCCCTGG 62.785 72.222 7.64 0.00 32.93 4.45
2217 2507 4.020617 TGGCGCTGGTTCTCCCTG 62.021 66.667 7.64 0.00 35.34 4.45
2218 2508 4.021925 GTGGCGCTGGTTCTCCCT 62.022 66.667 7.64 0.00 0.00 4.20
2219 2509 3.628646 ATGTGGCGCTGGTTCTCCC 62.629 63.158 7.64 0.00 0.00 4.30
2220 2510 1.244019 AAATGTGGCGCTGGTTCTCC 61.244 55.000 7.64 0.00 0.00 3.71
2221 2511 0.109597 CAAATGTGGCGCTGGTTCTC 60.110 55.000 7.64 0.00 0.00 2.87
2222 2512 1.526575 CCAAATGTGGCGCTGGTTCT 61.527 55.000 7.64 0.00 38.35 3.01
2223 2513 1.080569 CCAAATGTGGCGCTGGTTC 60.081 57.895 7.64 0.00 38.35 3.62
2224 2514 1.530419 TCCAAATGTGGCGCTGGTT 60.530 52.632 7.64 0.00 45.54 3.67
2225 2515 2.115052 TCCAAATGTGGCGCTGGT 59.885 55.556 7.64 0.00 45.54 4.00
2226 2516 2.568090 GTCCAAATGTGGCGCTGG 59.432 61.111 7.64 5.98 45.54 4.85
2227 2517 2.176546 CGTCCAAATGTGGCGCTG 59.823 61.111 7.64 0.00 45.54 5.18
2228 2518 2.031919 TCGTCCAAATGTGGCGCT 59.968 55.556 7.64 0.00 45.54 5.92
2229 2519 2.175811 GTCGTCCAAATGTGGCGC 59.824 61.111 12.31 0.00 45.54 6.53
2230 2520 2.686816 GGGTCGTCCAAATGTGGCG 61.687 63.158 11.24 11.24 45.54 5.69
2231 2521 2.686816 CGGGTCGTCCAAATGTGGC 61.687 63.158 0.00 0.00 45.54 5.01
2233 2523 1.006832 GATCGGGTCGTCCAAATGTG 58.993 55.000 0.04 0.00 34.36 3.21
2234 2524 0.107848 GGATCGGGTCGTCCAAATGT 60.108 55.000 0.04 0.00 34.57 2.71
2235 2525 0.107897 TGGATCGGGTCGTCCAAATG 60.108 55.000 0.04 0.00 41.36 2.32
2236 2526 0.837272 ATGGATCGGGTCGTCCAAAT 59.163 50.000 12.69 0.00 46.78 2.32
2237 2527 0.107897 CATGGATCGGGTCGTCCAAA 60.108 55.000 12.69 0.00 46.78 3.28
2238 2528 1.520192 CATGGATCGGGTCGTCCAA 59.480 57.895 12.69 0.00 46.78 3.53
2240 2530 2.421739 CCATGGATCGGGTCGTCC 59.578 66.667 5.56 0.00 35.02 4.79
2241 2531 2.421739 CCCATGGATCGGGTCGTC 59.578 66.667 15.22 0.00 39.05 4.20
2242 2532 3.161450 CCCCATGGATCGGGTCGT 61.161 66.667 15.22 0.00 42.77 4.34
2243 2533 4.626081 GCCCCATGGATCGGGTCG 62.626 72.222 15.22 0.00 42.77 4.79
2244 2534 4.626081 CGCCCCATGGATCGGGTC 62.626 72.222 15.22 1.49 42.77 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.