Multiple sequence alignment - TraesCS1A01G353200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G353200 chr1A 100.000 5412 0 0 1 5412 536934653 536940064 0.000000e+00 9995.0
1 TraesCS1A01G353200 chr1A 96.000 200 8 0 5213 5412 536896149 536896348 5.230000e-85 326.0
2 TraesCS1A01G353200 chr1A 93.056 144 10 0 1 144 167219171 167219314 1.530000e-50 211.0
3 TraesCS1A01G353200 chr1B 95.397 4736 162 25 1 4701 598905636 598900922 0.000000e+00 7487.0
4 TraesCS1A01G353200 chr1B 89.855 138 12 2 4700 4835 598900967 598900830 5.570000e-40 176.0
5 TraesCS1A01G353200 chr1D 96.676 4512 104 15 1 4488 441080304 441075815 0.000000e+00 7459.0
6 TraesCS1A01G353200 chr1D 91.080 213 8 5 4492 4701 441075751 441075547 1.480000e-70 278.0
7 TraesCS1A01G353200 chr1D 92.814 167 12 0 4700 4866 441075592 441075426 5.420000e-60 243.0
8 TraesCS1A01G353200 chr1D 95.763 118 5 0 5295 5412 103032233 103032116 1.990000e-44 191.0
9 TraesCS1A01G353200 chr1D 93.023 86 6 0 4867 4952 441075362 441075277 5.690000e-25 126.0
10 TraesCS1A01G353200 chr1D 97.619 42 1 0 4757 4798 441075495 441075454 7.520000e-09 73.1
11 TraesCS1A01G353200 chrUn 100.000 398 0 0 3002 3399 478968816 478968419 0.000000e+00 736.0
12 TraesCS1A01G353200 chr6A 75.587 639 129 24 1965 2590 187739319 187739943 1.910000e-74 291.0
13 TraesCS1A01G353200 chr6A 95.868 121 5 0 5292 5412 249259869 249259749 4.280000e-46 196.0
14 TraesCS1A01G353200 chr6B 75.430 639 130 24 1965 2590 248354546 248355170 8.870000e-73 285.0
15 TraesCS1A01G353200 chr6D 75.274 639 129 26 1965 2589 142747621 142748244 1.480000e-70 278.0
16 TraesCS1A01G353200 chr6D 97.500 120 3 0 5293 5412 179949472 179949591 7.110000e-49 206.0
17 TraesCS1A01G353200 chr6D 90.909 88 8 0 5207 5294 469694509 469694596 9.520000e-23 119.0
18 TraesCS1A01G353200 chr7A 97.458 118 3 0 5295 5412 287473780 287473663 9.190000e-48 202.0
19 TraesCS1A01G353200 chr4A 95.868 121 5 0 5292 5412 208931428 208931308 4.280000e-46 196.0
20 TraesCS1A01G353200 chr5D 95.833 120 5 0 5293 5412 432764725 432764606 1.540000e-45 195.0
21 TraesCS1A01G353200 chr5D 90.909 88 8 0 5207 5294 529527487 529527574 9.520000e-23 119.0
22 TraesCS1A01G353200 chr3B 95.798 119 5 0 5294 5412 332944032 332943914 5.530000e-45 193.0
23 TraesCS1A01G353200 chr3B 93.750 48 3 0 4410 4457 31265643 31265596 7.520000e-09 73.1
24 TraesCS1A01G353200 chr4D 93.750 128 6 2 5285 5412 414346227 414346352 1.990000e-44 191.0
25 TraesCS1A01G353200 chr5B 92.222 90 6 1 5204 5293 377348216 377348304 5.690000e-25 126.0
26 TraesCS1A01G353200 chr3D 92.045 88 7 0 5207 5294 29684397 29684484 2.050000e-24 124.0
27 TraesCS1A01G353200 chr3D 86.364 66 9 0 4410 4475 19541317 19541252 7.520000e-09 73.1
28 TraesCS1A01G353200 chr7D 91.011 89 8 0 5206 5294 595966224 595966312 2.650000e-23 121.0
29 TraesCS1A01G353200 chr5A 90.278 72 7 0 4397 4468 92438447 92438518 1.600000e-15 95.3
30 TraesCS1A01G353200 chr2B 90.769 65 5 1 5207 5271 88236549 88236486 9.660000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G353200 chr1A 536934653 536940064 5411 False 9995.00 9995 100.0000 1 5412 1 chr1A.!!$F3 5411
1 TraesCS1A01G353200 chr1B 598900830 598905636 4806 True 3831.50 7487 92.6260 1 4835 2 chr1B.!!$R1 4834
2 TraesCS1A01G353200 chr1D 441075277 441080304 5027 True 1635.82 7459 94.2424 1 4952 5 chr1D.!!$R2 4951
3 TraesCS1A01G353200 chr6A 187739319 187739943 624 False 291.00 291 75.5870 1965 2590 1 chr6A.!!$F1 625
4 TraesCS1A01G353200 chr6B 248354546 248355170 624 False 285.00 285 75.4300 1965 2590 1 chr6B.!!$F1 625
5 TraesCS1A01G353200 chr6D 142747621 142748244 623 False 278.00 278 75.2740 1965 2589 1 chr6D.!!$F1 624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
284 286 0.108585 AACCAACCTCTGCATCGTGT 59.891 50.000 0.00 0.00 0.00 4.49 F
864 870 0.171007 TATTTTGCTTGCGCCTCTGC 59.829 50.000 4.18 4.37 34.43 4.26 F
1304 1310 0.907704 TAGTCATTGCTCGTGGGGGT 60.908 55.000 0.00 0.00 0.00 4.95 F
1313 1319 2.282180 CGTGGGGGTTTGTCTGGG 60.282 66.667 0.00 0.00 0.00 4.45 F
2764 2791 2.431782 ACATACCAAGGGCAATGCATTC 59.568 45.455 9.53 4.70 0.00 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1313 1319 0.391793 GGCTTGACTCAGGCACTACC 60.392 60.000 14.53 0.0 38.23 3.18 R
2803 2830 2.437281 GGATCAGGAGAAGATTGCCAGA 59.563 50.000 0.00 0.0 0.00 3.86 R
2897 2924 1.152963 AGTGGCCTGACGTTTGCTT 60.153 52.632 3.32 0.0 0.00 3.91 R
2900 2927 4.454948 TCAGTGGCCTGACGTTTG 57.545 55.556 3.32 0.0 42.80 2.93 R
4488 4525 0.953471 CATTTCTTCACCCGTCGGCA 60.953 55.000 5.50 0.0 0.00 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 104 4.131088 GTGCTCGACCCGTCTCCC 62.131 72.222 0.00 0.00 0.00 4.30
234 235 4.096984 GGCCTTTTATGTTCTCATGACCAG 59.903 45.833 0.00 0.00 35.70 4.00
280 282 5.705609 TTTCTTAAACCAACCTCTGCATC 57.294 39.130 0.00 0.00 0.00 3.91
284 286 0.108585 AACCAACCTCTGCATCGTGT 59.891 50.000 0.00 0.00 0.00 4.49
298 300 7.684670 TCTGCATCGTGTAATTTTCATCTTAC 58.315 34.615 0.00 0.00 0.00 2.34
302 304 9.370126 GCATCGTGTAATTTTCATCTTACATAC 57.630 33.333 0.00 0.00 39.34 2.39
312 314 7.624360 TTTCATCTTACATACATTGTGTCCC 57.376 36.000 0.00 0.00 39.48 4.46
320 322 0.404040 ACATTGTGTCCCGTCCCATT 59.596 50.000 0.00 0.00 0.00 3.16
354 356 7.443272 TCTGAATTCTGAACATATGCATGTAGG 59.557 37.037 10.16 0.00 44.83 3.18
370 372 1.899437 TAGGTTCAGCAAGGGAGCGG 61.899 60.000 0.00 0.00 40.15 5.52
371 373 3.435186 GTTCAGCAAGGGAGCGGC 61.435 66.667 0.00 0.00 40.15 6.53
426 428 2.887151 AAGGTCCTTGGATGGAGTTG 57.113 50.000 2.38 0.00 36.69 3.16
559 565 3.516615 GCCATACAAGTGAGTGAGAGAC 58.483 50.000 0.00 0.00 0.00 3.36
594 600 0.521735 GTCAAAACCCTGTCCATCGC 59.478 55.000 0.00 0.00 0.00 4.58
846 852 6.134535 TCCTTTCCCTTAATTCTGCAACTA 57.865 37.500 0.00 0.00 0.00 2.24
864 870 0.171007 TATTTTGCTTGCGCCTCTGC 59.829 50.000 4.18 4.37 34.43 4.26
865 871 1.808531 ATTTTGCTTGCGCCTCTGCA 61.809 50.000 4.18 7.31 44.61 4.41
921 927 6.985645 ACAGATTTGTCTATCTTGCATCTCTC 59.014 38.462 0.00 0.00 32.60 3.20
1304 1310 0.907704 TAGTCATTGCTCGTGGGGGT 60.908 55.000 0.00 0.00 0.00 4.95
1313 1319 2.282180 CGTGGGGGTTTGTCTGGG 60.282 66.667 0.00 0.00 0.00 4.45
1672 1678 4.184629 AGCAATTGCAAACGTGGTAAAAA 58.815 34.783 30.89 0.00 45.16 1.94
1758 1764 6.326064 TCTTCCAAATGGTTGATCCTTTGAAA 59.674 34.615 0.00 0.00 36.93 2.69
1857 1863 3.947834 GTGGTTTGATTATCCCTCAGTGG 59.052 47.826 0.00 0.00 0.00 4.00
2211 2220 3.070302 GTCTCAGTGGAAAGGTCAGAAGT 59.930 47.826 0.00 0.00 0.00 3.01
2590 2599 4.162320 CAGGAGCCATAGGTAAGAACTGAA 59.838 45.833 0.00 0.00 0.00 3.02
2696 2723 6.877611 TTTAGCTCTTCGTTTTTGATTCCT 57.122 33.333 0.00 0.00 0.00 3.36
2697 2724 4.756084 AGCTCTTCGTTTTTGATTCCTG 57.244 40.909 0.00 0.00 0.00 3.86
2764 2791 2.431782 ACATACCAAGGGCAATGCATTC 59.568 45.455 9.53 4.70 0.00 2.67
2784 2811 7.027161 GCATTCGTTTTTCCTATTGCTAAAGA 58.973 34.615 0.00 0.00 0.00 2.52
2897 2924 2.451490 CTCCACTCAAGCAGGAGTAGA 58.549 52.381 9.60 7.63 46.05 2.59
2900 2927 2.615869 CACTCAAGCAGGAGTAGAAGC 58.384 52.381 9.60 0.00 46.05 3.86
2905 2932 2.086054 AGCAGGAGTAGAAGCAAACG 57.914 50.000 0.00 0.00 0.00 3.60
2906 2933 1.344763 AGCAGGAGTAGAAGCAAACGT 59.655 47.619 0.00 0.00 0.00 3.99
3408 3435 5.819379 CAGCAACATCACTGGTATACTGATT 59.181 40.000 2.25 0.00 0.00 2.57
3479 3508 1.776662 TGCTCGCTCCTGTTACCTAT 58.223 50.000 0.00 0.00 0.00 2.57
4065 4094 0.038166 ATGGACACCATGGACGCTTT 59.962 50.000 21.47 0.00 43.39 3.51
4151 4184 1.450531 GATTTCAGGGAGCCCATGCG 61.451 60.000 8.53 0.00 44.33 4.73
4182 4215 4.323562 CGAAAGAAAGGACCTTCCCTACAT 60.324 45.833 7.34 0.00 37.19 2.29
4187 4220 2.320781 AGGACCTTCCCTACATGATCG 58.679 52.381 0.00 0.00 37.19 3.69
4196 4229 1.744320 CTACATGATCGACCCCGCCA 61.744 60.000 0.00 0.00 35.37 5.69
4197 4230 2.023414 TACATGATCGACCCCGCCAC 62.023 60.000 0.00 0.00 35.37 5.01
4224 4257 3.441290 CTTGCTCCAGCTGGCTGC 61.441 66.667 30.84 30.84 42.35 5.25
4439 4476 2.438434 GTGGAACCAGCCCATCCG 60.438 66.667 0.00 0.00 35.91 4.18
4488 4525 2.093764 GCTCTCATAGAAGGTGTGTGCT 60.094 50.000 0.00 0.00 31.03 4.40
4489 4526 3.519579 CTCTCATAGAAGGTGTGTGCTG 58.480 50.000 0.00 0.00 0.00 4.41
4490 4527 2.005451 CTCATAGAAGGTGTGTGCTGC 58.995 52.381 0.00 0.00 0.00 5.25
4513 4610 1.202879 ACGGGTGAAGAAATGCCAAGA 60.203 47.619 0.00 0.00 0.00 3.02
4514 4611 1.200020 CGGGTGAAGAAATGCCAAGAC 59.800 52.381 0.00 0.00 0.00 3.01
4515 4612 1.200020 GGGTGAAGAAATGCCAAGACG 59.800 52.381 0.00 0.00 0.00 4.18
4516 4613 1.200020 GGTGAAGAAATGCCAAGACGG 59.800 52.381 0.00 0.00 38.11 4.79
4590 4693 4.195225 TCGTTGTGCATTACATACTGGA 57.805 40.909 0.00 0.00 39.48 3.86
4591 4694 4.570930 TCGTTGTGCATTACATACTGGAA 58.429 39.130 0.00 0.00 39.48 3.53
4592 4695 5.182487 TCGTTGTGCATTACATACTGGAAT 58.818 37.500 0.00 0.00 39.48 3.01
4593 4696 5.645929 TCGTTGTGCATTACATACTGGAATT 59.354 36.000 0.00 0.00 39.48 2.17
4634 4738 2.413837 ACGTGGCACTAGAACAACATC 58.586 47.619 16.72 0.00 0.00 3.06
4656 4761 4.096311 CGTGTACTGAGTATTCGGACAAG 58.904 47.826 0.33 0.00 33.69 3.16
4657 4762 4.379186 CGTGTACTGAGTATTCGGACAAGT 60.379 45.833 0.33 0.00 33.69 3.16
4658 4763 5.467705 GTGTACTGAGTATTCGGACAAGTT 58.532 41.667 0.33 0.00 33.69 2.66
4659 4764 5.924825 GTGTACTGAGTATTCGGACAAGTTT 59.075 40.000 0.33 0.00 33.69 2.66
4660 4765 5.924254 TGTACTGAGTATTCGGACAAGTTTG 59.076 40.000 0.33 0.00 33.69 2.93
4661 4766 3.746492 ACTGAGTATTCGGACAAGTTTGC 59.254 43.478 0.33 0.00 33.69 3.68
4662 4767 3.997021 CTGAGTATTCGGACAAGTTTGCT 59.003 43.478 0.00 0.00 0.00 3.91
4663 4768 4.385825 TGAGTATTCGGACAAGTTTGCTT 58.614 39.130 0.00 0.00 34.82 3.91
4664 4769 4.819630 TGAGTATTCGGACAAGTTTGCTTT 59.180 37.500 0.00 0.00 31.49 3.51
4665 4770 5.298276 TGAGTATTCGGACAAGTTTGCTTTT 59.702 36.000 0.00 0.00 31.49 2.27
4666 4771 6.483974 TGAGTATTCGGACAAGTTTGCTTTTA 59.516 34.615 0.00 0.00 31.49 1.52
4667 4772 7.012515 TGAGTATTCGGACAAGTTTGCTTTTAA 59.987 33.333 0.00 0.00 31.49 1.52
4668 4773 7.708998 AGTATTCGGACAAGTTTGCTTTTAAA 58.291 30.769 0.00 0.00 31.49 1.52
4669 4774 7.860872 AGTATTCGGACAAGTTTGCTTTTAAAG 59.139 33.333 0.00 0.00 31.49 1.85
4670 4775 5.570234 TCGGACAAGTTTGCTTTTAAAGT 57.430 34.783 6.57 0.00 31.49 2.66
4671 4776 5.336744 TCGGACAAGTTTGCTTTTAAAGTG 58.663 37.500 6.57 0.00 31.49 3.16
4672 4777 4.502645 CGGACAAGTTTGCTTTTAAAGTGG 59.497 41.667 6.57 0.00 31.49 4.00
4673 4778 4.808895 GGACAAGTTTGCTTTTAAAGTGGG 59.191 41.667 6.57 0.00 31.49 4.61
4674 4779 4.188462 ACAAGTTTGCTTTTAAAGTGGGC 58.812 39.130 6.57 0.00 31.49 5.36
4675 4780 4.081142 ACAAGTTTGCTTTTAAAGTGGGCT 60.081 37.500 6.57 0.00 31.49 5.19
4676 4781 4.753516 AGTTTGCTTTTAAAGTGGGCTT 57.246 36.364 6.57 0.00 36.30 4.35
4677 4782 5.097742 AGTTTGCTTTTAAAGTGGGCTTT 57.902 34.783 6.57 0.00 45.85 3.51
4678 4783 5.496556 AGTTTGCTTTTAAAGTGGGCTTTT 58.503 33.333 6.57 0.00 41.78 2.27
4679 4784 5.943416 AGTTTGCTTTTAAAGTGGGCTTTTT 59.057 32.000 6.57 0.00 41.78 1.94
4705 4810 6.509418 TTGTTATGATCCAAGGTAGTTTGC 57.491 37.500 0.00 0.00 0.00 3.68
4721 4826 5.034852 AGTTTGCTTTTAAAGTGGGCAAT 57.965 34.783 15.31 5.08 41.47 3.56
4800 4906 7.562135 AGATGGAGAAAATGCAAATAAATGCT 58.438 30.769 0.00 0.00 46.54 3.79
4822 4929 7.615403 TGCTGGTTTCATATAGATAGATGGAC 58.385 38.462 0.00 0.00 0.00 4.02
4896 5066 4.396478 GGGGAGTAGTGAGCAAAATCTTTC 59.604 45.833 0.00 0.00 0.00 2.62
4943 5113 1.136992 CGTCAGCAAACGTTGTAGTCG 60.137 52.381 0.00 0.00 37.86 4.18
4948 5118 2.283351 AGCAAACGTTGTAGTCGTCAAC 59.717 45.455 0.00 0.00 40.69 3.18
4952 5122 4.703899 AACGTTGTAGTCGTCAACATTC 57.296 40.909 0.00 0.99 43.40 2.67
4953 5123 3.973657 ACGTTGTAGTCGTCAACATTCT 58.026 40.909 8.98 0.00 43.40 2.40
4954 5124 4.365723 ACGTTGTAGTCGTCAACATTCTT 58.634 39.130 8.98 0.00 43.40 2.52
4955 5125 4.443394 ACGTTGTAGTCGTCAACATTCTTC 59.557 41.667 8.98 0.00 43.40 2.87
4956 5126 4.143389 CGTTGTAGTCGTCAACATTCTTCC 60.143 45.833 8.98 0.00 43.40 3.46
4957 5127 4.594123 TGTAGTCGTCAACATTCTTCCA 57.406 40.909 0.00 0.00 0.00 3.53
4958 5128 4.951254 TGTAGTCGTCAACATTCTTCCAA 58.049 39.130 0.00 0.00 0.00 3.53
4959 5129 5.361427 TGTAGTCGTCAACATTCTTCCAAA 58.639 37.500 0.00 0.00 0.00 3.28
4960 5130 5.818336 TGTAGTCGTCAACATTCTTCCAAAA 59.182 36.000 0.00 0.00 0.00 2.44
4961 5131 5.169836 AGTCGTCAACATTCTTCCAAAAC 57.830 39.130 0.00 0.00 0.00 2.43
4962 5132 4.638421 AGTCGTCAACATTCTTCCAAAACA 59.362 37.500 0.00 0.00 0.00 2.83
4963 5133 4.970003 GTCGTCAACATTCTTCCAAAACAG 59.030 41.667 0.00 0.00 0.00 3.16
4964 5134 4.878971 TCGTCAACATTCTTCCAAAACAGA 59.121 37.500 0.00 0.00 0.00 3.41
4965 5135 5.007626 TCGTCAACATTCTTCCAAAACAGAG 59.992 40.000 0.00 0.00 0.00 3.35
4966 5136 4.978580 GTCAACATTCTTCCAAAACAGAGC 59.021 41.667 0.00 0.00 0.00 4.09
4967 5137 4.644234 TCAACATTCTTCCAAAACAGAGCA 59.356 37.500 0.00 0.00 0.00 4.26
4968 5138 5.302568 TCAACATTCTTCCAAAACAGAGCAT 59.697 36.000 0.00 0.00 0.00 3.79
4969 5139 5.382618 ACATTCTTCCAAAACAGAGCATC 57.617 39.130 0.00 0.00 0.00 3.91
4970 5140 4.828939 ACATTCTTCCAAAACAGAGCATCA 59.171 37.500 0.00 0.00 37.82 3.07
4971 5141 4.836125 TTCTTCCAAAACAGAGCATCAC 57.164 40.909 0.00 0.00 37.82 3.06
4972 5142 3.819368 TCTTCCAAAACAGAGCATCACA 58.181 40.909 0.00 0.00 37.82 3.58
4973 5143 3.565482 TCTTCCAAAACAGAGCATCACAC 59.435 43.478 0.00 0.00 37.82 3.82
4974 5144 2.229792 TCCAAAACAGAGCATCACACC 58.770 47.619 0.00 0.00 37.82 4.16
4975 5145 1.069022 CCAAAACAGAGCATCACACCG 60.069 52.381 0.00 0.00 37.82 4.94
4976 5146 1.872952 CAAAACAGAGCATCACACCGA 59.127 47.619 0.00 0.00 37.82 4.69
4977 5147 2.479566 AAACAGAGCATCACACCGAT 57.520 45.000 0.00 0.00 37.82 4.18
4983 5153 4.200287 CATCACACCGATGGCGAA 57.800 55.556 0.00 0.00 46.73 4.70
4984 5154 2.465774 CATCACACCGATGGCGAAA 58.534 52.632 0.00 0.00 46.73 3.46
4985 5155 0.374758 CATCACACCGATGGCGAAAG 59.625 55.000 0.00 0.00 46.73 2.62
4986 5156 0.249120 ATCACACCGATGGCGAAAGA 59.751 50.000 0.00 0.00 40.82 2.52
4987 5157 0.034198 TCACACCGATGGCGAAAGAA 59.966 50.000 0.00 0.00 40.82 2.52
4988 5158 1.086696 CACACCGATGGCGAAAGAAT 58.913 50.000 0.00 0.00 40.82 2.40
4989 5159 2.093921 TCACACCGATGGCGAAAGAATA 60.094 45.455 0.00 0.00 40.82 1.75
4990 5160 2.030457 CACACCGATGGCGAAAGAATAC 59.970 50.000 0.00 0.00 40.82 1.89
4991 5161 1.257936 CACCGATGGCGAAAGAATACG 59.742 52.381 0.00 0.00 40.82 3.06
4992 5162 0.859232 CCGATGGCGAAAGAATACGG 59.141 55.000 0.00 0.00 40.82 4.02
4993 5163 1.567504 CGATGGCGAAAGAATACGGT 58.432 50.000 0.00 0.00 40.82 4.83
4994 5164 1.521423 CGATGGCGAAAGAATACGGTC 59.479 52.381 0.00 0.00 40.82 4.79
4995 5165 1.865340 GATGGCGAAAGAATACGGTCC 59.135 52.381 0.00 0.00 0.00 4.46
4996 5166 0.458889 TGGCGAAAGAATACGGTCCG 60.459 55.000 10.48 10.48 0.00 4.79
4997 5167 1.149964 GGCGAAAGAATACGGTCCGG 61.150 60.000 17.28 0.00 0.00 5.14
4998 5168 0.459063 GCGAAAGAATACGGTCCGGT 60.459 55.000 17.28 3.88 0.00 5.28
4999 5169 1.274596 CGAAAGAATACGGTCCGGTG 58.725 55.000 17.28 0.00 0.00 4.94
5000 5170 1.004595 GAAAGAATACGGTCCGGTGC 58.995 55.000 17.28 2.25 0.00 5.01
5001 5171 0.611714 AAAGAATACGGTCCGGTGCT 59.388 50.000 17.28 4.84 0.00 4.40
5002 5172 0.611714 AAGAATACGGTCCGGTGCTT 59.388 50.000 17.28 11.04 0.00 3.91
5003 5173 1.477553 AGAATACGGTCCGGTGCTTA 58.522 50.000 17.28 0.00 0.00 3.09
5004 5174 2.037144 AGAATACGGTCCGGTGCTTAT 58.963 47.619 17.28 0.59 0.00 1.73
5005 5175 2.132762 GAATACGGTCCGGTGCTTATG 58.867 52.381 17.28 0.00 0.00 1.90
5006 5176 0.391597 ATACGGTCCGGTGCTTATGG 59.608 55.000 17.28 0.00 0.00 2.74
5007 5177 0.683828 TACGGTCCGGTGCTTATGGA 60.684 55.000 17.28 0.00 0.00 3.41
5008 5178 1.219664 CGGTCCGGTGCTTATGGAA 59.780 57.895 2.34 0.00 32.60 3.53
5009 5179 0.391927 CGGTCCGGTGCTTATGGAAA 60.392 55.000 2.34 0.00 32.60 3.13
5010 5180 1.379527 GGTCCGGTGCTTATGGAAAG 58.620 55.000 0.00 0.00 32.60 2.62
5011 5181 1.065709 GGTCCGGTGCTTATGGAAAGA 60.066 52.381 0.00 0.00 32.60 2.52
5012 5182 2.421529 GGTCCGGTGCTTATGGAAAGAT 60.422 50.000 0.00 0.00 32.60 2.40
5013 5183 2.614057 GTCCGGTGCTTATGGAAAGATG 59.386 50.000 0.00 0.00 32.60 2.90
5014 5184 2.503765 TCCGGTGCTTATGGAAAGATGA 59.496 45.455 0.00 0.00 0.00 2.92
5015 5185 3.136443 TCCGGTGCTTATGGAAAGATGAT 59.864 43.478 0.00 0.00 0.00 2.45
5016 5186 3.251729 CCGGTGCTTATGGAAAGATGATG 59.748 47.826 0.00 0.00 0.00 3.07
5017 5187 3.251729 CGGTGCTTATGGAAAGATGATGG 59.748 47.826 0.00 0.00 0.00 3.51
5018 5188 3.005155 GGTGCTTATGGAAAGATGATGGC 59.995 47.826 0.00 0.00 0.00 4.40
5019 5189 2.880268 TGCTTATGGAAAGATGATGGCG 59.120 45.455 0.00 0.00 0.00 5.69
5020 5190 2.227388 GCTTATGGAAAGATGATGGCGG 59.773 50.000 0.00 0.00 0.00 6.13
5021 5191 3.480470 CTTATGGAAAGATGATGGCGGT 58.520 45.455 0.00 0.00 0.00 5.68
5022 5192 1.683943 ATGGAAAGATGATGGCGGTG 58.316 50.000 0.00 0.00 0.00 4.94
5023 5193 0.327924 TGGAAAGATGATGGCGGTGT 59.672 50.000 0.00 0.00 0.00 4.16
5024 5194 1.271871 TGGAAAGATGATGGCGGTGTT 60.272 47.619 0.00 0.00 0.00 3.32
5025 5195 1.818674 GGAAAGATGATGGCGGTGTTT 59.181 47.619 0.00 0.00 0.00 2.83
5026 5196 2.415893 GGAAAGATGATGGCGGTGTTTG 60.416 50.000 0.00 0.00 0.00 2.93
5027 5197 1.909700 AAGATGATGGCGGTGTTTGT 58.090 45.000 0.00 0.00 0.00 2.83
5028 5198 1.909700 AGATGATGGCGGTGTTTGTT 58.090 45.000 0.00 0.00 0.00 2.83
5029 5199 2.238521 AGATGATGGCGGTGTTTGTTT 58.761 42.857 0.00 0.00 0.00 2.83
5030 5200 2.030007 AGATGATGGCGGTGTTTGTTTG 60.030 45.455 0.00 0.00 0.00 2.93
5031 5201 1.393603 TGATGGCGGTGTTTGTTTGA 58.606 45.000 0.00 0.00 0.00 2.69
5032 5202 1.066303 TGATGGCGGTGTTTGTTTGAC 59.934 47.619 0.00 0.00 0.00 3.18
5033 5203 1.066303 GATGGCGGTGTTTGTTTGACA 59.934 47.619 0.00 0.00 0.00 3.58
5034 5204 0.453793 TGGCGGTGTTTGTTTGACAG 59.546 50.000 0.00 0.00 0.00 3.51
5035 5205 0.736053 GGCGGTGTTTGTTTGACAGA 59.264 50.000 0.00 0.00 0.00 3.41
5036 5206 1.336755 GGCGGTGTTTGTTTGACAGAT 59.663 47.619 0.00 0.00 0.00 2.90
5037 5207 2.384382 GCGGTGTTTGTTTGACAGATG 58.616 47.619 0.00 0.00 0.00 2.90
5038 5208 2.032799 GCGGTGTTTGTTTGACAGATGA 59.967 45.455 0.00 0.00 0.00 2.92
5039 5209 3.304659 GCGGTGTTTGTTTGACAGATGAT 60.305 43.478 0.00 0.00 0.00 2.45
5040 5210 4.221342 CGGTGTTTGTTTGACAGATGATG 58.779 43.478 0.00 0.00 0.00 3.07
5041 5211 4.024133 CGGTGTTTGTTTGACAGATGATGA 60.024 41.667 0.00 0.00 0.00 2.92
5042 5212 5.505489 CGGTGTTTGTTTGACAGATGATGAA 60.505 40.000 0.00 0.00 0.00 2.57
5043 5213 6.272318 GGTGTTTGTTTGACAGATGATGAAA 58.728 36.000 0.00 0.00 0.00 2.69
5044 5214 6.925165 GGTGTTTGTTTGACAGATGATGAAAT 59.075 34.615 0.00 0.00 0.00 2.17
5045 5215 7.095940 GGTGTTTGTTTGACAGATGATGAAATG 60.096 37.037 0.00 0.00 0.00 2.32
5046 5216 6.421501 TGTTTGTTTGACAGATGATGAAATGC 59.578 34.615 0.00 0.00 0.00 3.56
5047 5217 4.725359 TGTTTGACAGATGATGAAATGCG 58.275 39.130 0.00 0.00 0.00 4.73
5048 5218 4.455190 TGTTTGACAGATGATGAAATGCGA 59.545 37.500 0.00 0.00 0.00 5.10
5049 5219 4.870221 TTGACAGATGATGAAATGCGAG 57.130 40.909 0.00 0.00 0.00 5.03
5050 5220 4.127566 TGACAGATGATGAAATGCGAGA 57.872 40.909 0.00 0.00 0.00 4.04
5051 5221 4.117685 TGACAGATGATGAAATGCGAGAG 58.882 43.478 0.00 0.00 0.00 3.20
5052 5222 4.118410 GACAGATGATGAAATGCGAGAGT 58.882 43.478 0.00 0.00 0.00 3.24
5053 5223 4.511527 ACAGATGATGAAATGCGAGAGTT 58.488 39.130 0.00 0.00 0.00 3.01
5054 5224 4.331992 ACAGATGATGAAATGCGAGAGTTG 59.668 41.667 0.00 0.00 0.00 3.16
5055 5225 3.875727 AGATGATGAAATGCGAGAGTTGG 59.124 43.478 0.00 0.00 0.00 3.77
5056 5226 1.739466 TGATGAAATGCGAGAGTTGGC 59.261 47.619 0.00 0.00 0.00 4.52
5057 5227 1.739466 GATGAAATGCGAGAGTTGGCA 59.261 47.619 0.00 0.00 42.40 4.92
5058 5228 0.874390 TGAAATGCGAGAGTTGGCAC 59.126 50.000 0.00 0.00 40.97 5.01
5059 5229 1.160137 GAAATGCGAGAGTTGGCACT 58.840 50.000 0.00 0.00 40.97 4.40
5060 5230 0.877071 AAATGCGAGAGTTGGCACTG 59.123 50.000 0.00 0.00 40.97 3.66
5061 5231 0.957395 AATGCGAGAGTTGGCACTGG 60.957 55.000 0.00 0.00 40.97 4.00
5062 5232 2.031163 GCGAGAGTTGGCACTGGT 59.969 61.111 0.00 0.00 31.22 4.00
5063 5233 2.029844 GCGAGAGTTGGCACTGGTC 61.030 63.158 0.00 0.00 31.22 4.02
5064 5234 1.668294 CGAGAGTTGGCACTGGTCT 59.332 57.895 0.00 0.00 31.22 3.85
5065 5235 0.034059 CGAGAGTTGGCACTGGTCTT 59.966 55.000 0.00 0.00 31.22 3.01
5066 5236 1.802069 GAGAGTTGGCACTGGTCTTC 58.198 55.000 0.00 0.00 31.22 2.87
5067 5237 1.346068 GAGAGTTGGCACTGGTCTTCT 59.654 52.381 0.00 0.00 31.22 2.85
5068 5238 2.563179 GAGAGTTGGCACTGGTCTTCTA 59.437 50.000 0.00 0.00 31.22 2.10
5069 5239 3.177228 AGAGTTGGCACTGGTCTTCTAT 58.823 45.455 0.00 0.00 31.22 1.98
5070 5240 3.584848 AGAGTTGGCACTGGTCTTCTATT 59.415 43.478 0.00 0.00 31.22 1.73
5071 5241 3.679389 AGTTGGCACTGGTCTTCTATTG 58.321 45.455 0.00 0.00 0.00 1.90
5072 5242 3.073062 AGTTGGCACTGGTCTTCTATTGT 59.927 43.478 0.00 0.00 0.00 2.71
5073 5243 4.286032 AGTTGGCACTGGTCTTCTATTGTA 59.714 41.667 0.00 0.00 0.00 2.41
5074 5244 4.901197 TGGCACTGGTCTTCTATTGTAA 57.099 40.909 0.00 0.00 0.00 2.41
5075 5245 4.575885 TGGCACTGGTCTTCTATTGTAAC 58.424 43.478 0.00 0.00 0.00 2.50
5076 5246 3.939592 GGCACTGGTCTTCTATTGTAACC 59.060 47.826 0.00 0.00 0.00 2.85
5077 5247 4.323562 GGCACTGGTCTTCTATTGTAACCT 60.324 45.833 0.00 0.00 0.00 3.50
5078 5248 4.870991 GCACTGGTCTTCTATTGTAACCTC 59.129 45.833 0.00 0.00 0.00 3.85
5079 5249 5.337652 GCACTGGTCTTCTATTGTAACCTCT 60.338 44.000 0.00 0.00 0.00 3.69
5080 5250 6.127423 GCACTGGTCTTCTATTGTAACCTCTA 60.127 42.308 0.00 0.00 0.00 2.43
5081 5251 7.418025 GCACTGGTCTTCTATTGTAACCTCTAT 60.418 40.741 0.00 0.00 0.00 1.98
5082 5252 9.132923 CACTGGTCTTCTATTGTAACCTCTATA 57.867 37.037 0.00 0.00 0.00 1.31
5083 5253 9.134055 ACTGGTCTTCTATTGTAACCTCTATAC 57.866 37.037 0.00 0.00 0.00 1.47
5084 5254 9.357161 CTGGTCTTCTATTGTAACCTCTATACT 57.643 37.037 0.00 0.00 0.00 2.12
5085 5255 9.710818 TGGTCTTCTATTGTAACCTCTATACTT 57.289 33.333 0.00 0.00 0.00 2.24
5093 5263 7.973048 TTGTAACCTCTATACTTCTGATGGT 57.027 36.000 0.00 0.00 0.00 3.55
5094 5264 7.973048 TGTAACCTCTATACTTCTGATGGTT 57.027 36.000 0.00 0.00 39.49 3.67
5095 5265 7.782049 TGTAACCTCTATACTTCTGATGGTTG 58.218 38.462 0.00 0.00 37.18 3.77
5096 5266 6.875972 AACCTCTATACTTCTGATGGTTGT 57.124 37.500 0.00 0.00 35.54 3.32
5097 5267 6.227298 ACCTCTATACTTCTGATGGTTGTG 57.773 41.667 0.00 0.00 0.00 3.33
5098 5268 5.958380 ACCTCTATACTTCTGATGGTTGTGA 59.042 40.000 0.00 0.00 0.00 3.58
5099 5269 6.613271 ACCTCTATACTTCTGATGGTTGTGAT 59.387 38.462 0.00 0.00 0.00 3.06
5100 5270 7.151308 CCTCTATACTTCTGATGGTTGTGATC 58.849 42.308 0.00 0.00 0.00 2.92
5101 5271 7.201947 CCTCTATACTTCTGATGGTTGTGATCA 60.202 40.741 0.00 0.00 0.00 2.92
5102 5272 8.078060 TCTATACTTCTGATGGTTGTGATCAA 57.922 34.615 0.00 0.00 29.44 2.57
5103 5273 8.200120 TCTATACTTCTGATGGTTGTGATCAAG 58.800 37.037 0.00 0.00 33.97 3.02
5104 5274 4.978099 ACTTCTGATGGTTGTGATCAAGT 58.022 39.130 0.00 0.00 33.97 3.16
5105 5275 5.380043 ACTTCTGATGGTTGTGATCAAGTT 58.620 37.500 0.00 0.00 33.97 2.66
5106 5276 5.471456 ACTTCTGATGGTTGTGATCAAGTTC 59.529 40.000 0.00 0.00 33.97 3.01
5107 5277 4.971939 TCTGATGGTTGTGATCAAGTTCA 58.028 39.130 0.00 0.00 33.97 3.18
5108 5278 5.375773 TCTGATGGTTGTGATCAAGTTCAA 58.624 37.500 0.00 0.00 33.97 2.69
5109 5279 5.471116 TCTGATGGTTGTGATCAAGTTCAAG 59.529 40.000 0.00 0.00 33.97 3.02
5110 5280 5.375773 TGATGGTTGTGATCAAGTTCAAGA 58.624 37.500 0.00 0.00 33.97 3.02
5111 5281 5.471116 TGATGGTTGTGATCAAGTTCAAGAG 59.529 40.000 0.00 0.00 33.97 2.85
5112 5282 5.034852 TGGTTGTGATCAAGTTCAAGAGA 57.965 39.130 0.00 0.00 33.97 3.10
5113 5283 5.624159 TGGTTGTGATCAAGTTCAAGAGAT 58.376 37.500 0.00 0.00 33.97 2.75
5114 5284 5.471116 TGGTTGTGATCAAGTTCAAGAGATG 59.529 40.000 0.00 0.00 33.97 2.90
5115 5285 5.388944 GTTGTGATCAAGTTCAAGAGATGC 58.611 41.667 0.00 0.00 33.97 3.91
5116 5286 4.903054 TGTGATCAAGTTCAAGAGATGCT 58.097 39.130 0.00 0.00 0.00 3.79
5117 5287 4.934001 TGTGATCAAGTTCAAGAGATGCTC 59.066 41.667 0.00 0.00 0.00 4.26
5118 5288 4.332268 GTGATCAAGTTCAAGAGATGCTCC 59.668 45.833 0.00 0.00 0.00 4.70
5119 5289 4.019950 TGATCAAGTTCAAGAGATGCTCCA 60.020 41.667 0.00 0.00 0.00 3.86
5120 5290 3.935315 TCAAGTTCAAGAGATGCTCCAG 58.065 45.455 0.00 0.00 0.00 3.86
5121 5291 3.580022 TCAAGTTCAAGAGATGCTCCAGA 59.420 43.478 0.00 0.00 0.00 3.86
5122 5292 4.040829 TCAAGTTCAAGAGATGCTCCAGAA 59.959 41.667 0.00 0.00 0.00 3.02
5123 5293 4.840716 AGTTCAAGAGATGCTCCAGAAT 57.159 40.909 0.00 0.00 30.59 2.40
5124 5294 5.946942 AGTTCAAGAGATGCTCCAGAATA 57.053 39.130 0.00 0.00 30.59 1.75
5125 5295 6.497624 AGTTCAAGAGATGCTCCAGAATAT 57.502 37.500 0.00 0.00 30.59 1.28
5126 5296 6.897986 AGTTCAAGAGATGCTCCAGAATATT 58.102 36.000 0.00 0.00 30.59 1.28
5127 5297 6.766944 AGTTCAAGAGATGCTCCAGAATATTG 59.233 38.462 0.00 0.00 30.59 1.90
5128 5298 6.490241 TCAAGAGATGCTCCAGAATATTGA 57.510 37.500 0.00 0.00 0.00 2.57
5129 5299 7.075851 TCAAGAGATGCTCCAGAATATTGAT 57.924 36.000 0.00 0.00 0.00 2.57
5130 5300 6.935208 TCAAGAGATGCTCCAGAATATTGATG 59.065 38.462 0.00 0.00 0.00 3.07
5131 5301 5.247084 AGAGATGCTCCAGAATATTGATGC 58.753 41.667 0.00 0.00 0.00 3.91
5132 5302 4.981812 AGATGCTCCAGAATATTGATGCA 58.018 39.130 0.00 0.00 33.33 3.96
5133 5303 5.571285 AGATGCTCCAGAATATTGATGCAT 58.429 37.500 0.00 0.00 38.50 3.96
5134 5304 5.648526 AGATGCTCCAGAATATTGATGCATC 59.351 40.000 20.14 20.14 44.33 3.91
5135 5305 4.077108 TGCTCCAGAATATTGATGCATCC 58.923 43.478 23.67 7.23 0.00 3.51
5136 5306 3.126514 GCTCCAGAATATTGATGCATCCG 59.873 47.826 23.67 4.26 0.00 4.18
5137 5307 4.321718 CTCCAGAATATTGATGCATCCGT 58.678 43.478 23.67 14.25 0.00 4.69
5138 5308 4.717877 TCCAGAATATTGATGCATCCGTT 58.282 39.130 23.67 12.49 0.00 4.44
5139 5309 5.132502 TCCAGAATATTGATGCATCCGTTT 58.867 37.500 23.67 11.83 0.00 3.60
5140 5310 5.239306 TCCAGAATATTGATGCATCCGTTTC 59.761 40.000 23.67 18.69 0.00 2.78
5141 5311 5.008911 CCAGAATATTGATGCATCCGTTTCA 59.991 40.000 23.67 2.43 0.00 2.69
5142 5312 6.459985 CCAGAATATTGATGCATCCGTTTCAA 60.460 38.462 23.67 12.18 33.06 2.69
5143 5313 7.143340 CAGAATATTGATGCATCCGTTTCAAT 58.857 34.615 23.67 18.07 40.74 2.57
5144 5314 7.114388 CAGAATATTGATGCATCCGTTTCAATG 59.886 37.037 23.67 10.00 38.77 2.82
5145 5315 4.987408 ATTGATGCATCCGTTTCAATGA 57.013 36.364 23.67 0.00 37.41 2.57
5146 5316 4.359971 TTGATGCATCCGTTTCAATGAG 57.640 40.909 23.67 0.00 0.00 2.90
5147 5317 3.608796 TGATGCATCCGTTTCAATGAGA 58.391 40.909 23.67 0.00 0.00 3.27
5148 5318 4.201657 TGATGCATCCGTTTCAATGAGAT 58.798 39.130 23.67 0.00 0.00 2.75
5149 5319 4.035909 TGATGCATCCGTTTCAATGAGATG 59.964 41.667 23.67 6.01 37.87 2.90
5150 5320 3.608796 TGCATCCGTTTCAATGAGATGA 58.391 40.909 12.53 0.00 37.16 2.92
5151 5321 4.009002 TGCATCCGTTTCAATGAGATGAA 58.991 39.130 12.53 1.53 37.16 2.57
5152 5322 4.142622 TGCATCCGTTTCAATGAGATGAAC 60.143 41.667 12.53 0.89 38.95 3.18
5153 5323 4.142622 GCATCCGTTTCAATGAGATGAACA 60.143 41.667 12.53 0.00 38.95 3.18
5154 5324 5.619757 GCATCCGTTTCAATGAGATGAACAA 60.620 40.000 12.53 0.00 38.95 2.83
5155 5325 5.356882 TCCGTTTCAATGAGATGAACAAC 57.643 39.130 0.00 0.00 38.95 3.32
5156 5326 4.215399 TCCGTTTCAATGAGATGAACAACC 59.785 41.667 0.00 0.00 38.95 3.77
5157 5327 4.216257 CCGTTTCAATGAGATGAACAACCT 59.784 41.667 0.00 0.00 38.95 3.50
5158 5328 5.149273 CGTTTCAATGAGATGAACAACCTG 58.851 41.667 0.00 0.00 38.95 4.00
5159 5329 4.771590 TTCAATGAGATGAACAACCTGC 57.228 40.909 0.00 0.00 34.50 4.85
5160 5330 4.025040 TCAATGAGATGAACAACCTGCT 57.975 40.909 0.00 0.00 0.00 4.24
5161 5331 5.164620 TCAATGAGATGAACAACCTGCTA 57.835 39.130 0.00 0.00 0.00 3.49
5162 5332 5.748402 TCAATGAGATGAACAACCTGCTAT 58.252 37.500 0.00 0.00 0.00 2.97
5163 5333 5.819379 TCAATGAGATGAACAACCTGCTATC 59.181 40.000 0.00 0.00 0.00 2.08
5164 5334 4.824479 TGAGATGAACAACCTGCTATCA 57.176 40.909 0.00 0.00 0.00 2.15
5165 5335 5.164620 TGAGATGAACAACCTGCTATCAA 57.835 39.130 0.00 0.00 0.00 2.57
5166 5336 5.181009 TGAGATGAACAACCTGCTATCAAG 58.819 41.667 0.00 0.00 0.00 3.02
5167 5337 4.521146 AGATGAACAACCTGCTATCAAGG 58.479 43.478 0.00 0.00 0.00 3.61
5168 5338 4.225942 AGATGAACAACCTGCTATCAAGGA 59.774 41.667 0.00 0.00 0.00 3.36
5169 5339 3.674997 TGAACAACCTGCTATCAAGGAC 58.325 45.455 0.00 0.00 0.00 3.85
5170 5340 3.327757 TGAACAACCTGCTATCAAGGACT 59.672 43.478 0.00 0.00 0.00 3.85
5171 5341 4.202461 TGAACAACCTGCTATCAAGGACTT 60.202 41.667 0.00 0.00 0.00 3.01
5172 5342 3.944087 ACAACCTGCTATCAAGGACTTC 58.056 45.455 0.00 0.00 0.00 3.01
5173 5343 3.584848 ACAACCTGCTATCAAGGACTTCT 59.415 43.478 0.00 0.00 0.00 2.85
5174 5344 4.187694 CAACCTGCTATCAAGGACTTCTC 58.812 47.826 0.00 0.00 0.00 2.87
5175 5345 3.718723 ACCTGCTATCAAGGACTTCTCT 58.281 45.455 0.00 0.00 0.00 3.10
5176 5346 3.450457 ACCTGCTATCAAGGACTTCTCTG 59.550 47.826 0.00 0.00 0.00 3.35
5177 5347 3.703556 CCTGCTATCAAGGACTTCTCTGA 59.296 47.826 0.00 0.00 0.00 3.27
5178 5348 4.344679 CCTGCTATCAAGGACTTCTCTGAT 59.655 45.833 0.00 0.00 32.30 2.90
5179 5349 5.273674 TGCTATCAAGGACTTCTCTGATG 57.726 43.478 0.00 0.00 31.06 3.07
5180 5350 4.958581 TGCTATCAAGGACTTCTCTGATGA 59.041 41.667 0.00 0.00 31.06 2.92
5181 5351 5.601729 TGCTATCAAGGACTTCTCTGATGAT 59.398 40.000 0.00 0.00 31.06 2.45
5182 5352 5.927689 GCTATCAAGGACTTCTCTGATGATG 59.072 44.000 0.00 0.00 31.06 3.07
5183 5353 6.239261 GCTATCAAGGACTTCTCTGATGATGA 60.239 42.308 0.00 0.00 31.06 2.92
5184 5354 5.595257 TCAAGGACTTCTCTGATGATGAG 57.405 43.478 0.00 0.00 0.00 2.90
5185 5355 5.267587 TCAAGGACTTCTCTGATGATGAGA 58.732 41.667 0.00 0.00 38.62 3.27
5186 5356 5.898397 TCAAGGACTTCTCTGATGATGAGAT 59.102 40.000 0.00 0.00 39.87 2.75
5187 5357 6.383436 TCAAGGACTTCTCTGATGATGAGATT 59.617 38.462 0.00 0.00 39.87 2.40
5188 5358 6.164417 AGGACTTCTCTGATGATGAGATTG 57.836 41.667 0.00 0.00 39.87 2.67
5189 5359 5.898397 AGGACTTCTCTGATGATGAGATTGA 59.102 40.000 0.00 0.00 39.87 2.57
5190 5360 6.383436 AGGACTTCTCTGATGATGAGATTGAA 59.617 38.462 0.00 0.00 39.87 2.69
5191 5361 7.046652 GGACTTCTCTGATGATGAGATTGAAA 58.953 38.462 0.00 0.00 39.87 2.69
5192 5362 7.225145 GGACTTCTCTGATGATGAGATTGAAAG 59.775 40.741 0.00 0.00 39.87 2.62
5193 5363 7.049133 ACTTCTCTGATGATGAGATTGAAAGG 58.951 38.462 0.00 0.00 39.87 3.11
5194 5364 5.926663 TCTCTGATGATGAGATTGAAAGGG 58.073 41.667 0.00 0.00 35.86 3.95
5195 5365 4.458397 TCTGATGATGAGATTGAAAGGGC 58.542 43.478 0.00 0.00 0.00 5.19
5196 5366 4.080186 TCTGATGATGAGATTGAAAGGGCA 60.080 41.667 0.00 0.00 0.00 5.36
5197 5367 4.800023 TGATGATGAGATTGAAAGGGCAT 58.200 39.130 0.00 0.00 0.00 4.40
5198 5368 5.205821 TGATGATGAGATTGAAAGGGCATT 58.794 37.500 0.00 0.00 0.00 3.56
5199 5369 6.367161 TGATGATGAGATTGAAAGGGCATTA 58.633 36.000 0.00 0.00 0.00 1.90
5200 5370 7.008332 TGATGATGAGATTGAAAGGGCATTAT 58.992 34.615 0.00 0.00 0.00 1.28
5201 5371 7.507956 TGATGATGAGATTGAAAGGGCATTATT 59.492 33.333 0.00 0.00 0.00 1.40
5202 5372 7.664552 TGATGAGATTGAAAGGGCATTATTT 57.335 32.000 0.00 0.00 0.00 1.40
5203 5373 7.494211 TGATGAGATTGAAAGGGCATTATTTG 58.506 34.615 0.00 0.00 0.00 2.32
5204 5374 7.342541 TGATGAGATTGAAAGGGCATTATTTGA 59.657 33.333 0.00 0.00 0.00 2.69
5205 5375 7.664552 TGAGATTGAAAGGGCATTATTTGAT 57.335 32.000 0.00 0.00 0.00 2.57
5206 5376 8.765488 TGAGATTGAAAGGGCATTATTTGATA 57.235 30.769 0.00 0.00 0.00 2.15
5207 5377 8.632679 TGAGATTGAAAGGGCATTATTTGATAC 58.367 33.333 0.00 0.00 0.00 2.24
5208 5378 8.773033 AGATTGAAAGGGCATTATTTGATACT 57.227 30.769 0.00 0.00 0.00 2.12
5209 5379 9.866655 AGATTGAAAGGGCATTATTTGATACTA 57.133 29.630 0.00 0.00 0.00 1.82
5211 5381 9.646522 ATTGAAAGGGCATTATTTGATACTAGT 57.353 29.630 0.00 0.00 0.00 2.57
5212 5382 8.450578 TGAAAGGGCATTATTTGATACTAGTG 57.549 34.615 5.39 0.00 0.00 2.74
5213 5383 7.502226 TGAAAGGGCATTATTTGATACTAGTGG 59.498 37.037 5.39 0.00 0.00 4.00
5214 5384 6.515512 AGGGCATTATTTGATACTAGTGGT 57.484 37.500 5.39 0.00 0.00 4.16
5215 5385 6.911308 AGGGCATTATTTGATACTAGTGGTT 58.089 36.000 5.39 0.00 0.00 3.67
5216 5386 6.772716 AGGGCATTATTTGATACTAGTGGTTG 59.227 38.462 5.39 0.00 0.00 3.77
5217 5387 6.016276 GGGCATTATTTGATACTAGTGGTTGG 60.016 42.308 5.39 0.00 0.00 3.77
5218 5388 6.016276 GGCATTATTTGATACTAGTGGTTGGG 60.016 42.308 5.39 0.00 0.00 4.12
5219 5389 6.016276 GCATTATTTGATACTAGTGGTTGGGG 60.016 42.308 5.39 0.00 0.00 4.96
5220 5390 3.359695 TTTGATACTAGTGGTTGGGGC 57.640 47.619 5.39 0.00 0.00 5.80
5221 5391 0.828022 TGATACTAGTGGTTGGGGCG 59.172 55.000 5.39 0.00 0.00 6.13
5222 5392 0.532196 GATACTAGTGGTTGGGGCGC 60.532 60.000 5.39 0.00 0.00 6.53
5223 5393 1.268992 ATACTAGTGGTTGGGGCGCA 61.269 55.000 10.83 0.00 0.00 6.09
5224 5394 2.175035 TACTAGTGGTTGGGGCGCAC 62.175 60.000 10.83 4.83 0.00 5.34
5225 5395 4.338710 TAGTGGTTGGGGCGCACC 62.339 66.667 25.59 25.59 39.11 5.01
5231 5401 4.652131 TTGGGGCGCACCGTTGAT 62.652 61.111 26.48 0.00 41.60 2.57
5238 5408 4.166011 GCACCGTTGATGCGCCTC 62.166 66.667 4.18 5.02 32.45 4.70
5239 5409 3.499737 CACCGTTGATGCGCCTCC 61.500 66.667 4.18 0.00 0.00 4.30
5240 5410 3.706373 ACCGTTGATGCGCCTCCT 61.706 61.111 4.18 0.00 0.00 3.69
5241 5411 3.197790 CCGTTGATGCGCCTCCTG 61.198 66.667 4.18 0.00 0.00 3.86
5242 5412 2.125552 CGTTGATGCGCCTCCTGA 60.126 61.111 4.18 0.00 0.00 3.86
5243 5413 2.169789 CGTTGATGCGCCTCCTGAG 61.170 63.158 4.18 0.00 0.00 3.35
5244 5414 2.124983 TTGATGCGCCTCCTGAGC 60.125 61.111 4.18 0.00 0.00 4.26
5262 5432 4.704833 GGAAGCTCTGCGGTGCCA 62.705 66.667 15.72 0.00 38.80 4.92
5263 5433 3.123620 GAAGCTCTGCGGTGCCAG 61.124 66.667 15.72 0.00 32.98 4.85
5264 5434 4.711949 AAGCTCTGCGGTGCCAGG 62.712 66.667 15.72 0.00 33.64 4.45
5266 5436 4.082523 GCTCTGCGGTGCCAGGTA 62.083 66.667 8.42 0.00 33.64 3.08
5267 5437 2.185350 CTCTGCGGTGCCAGGTAG 59.815 66.667 0.00 0.00 33.64 3.18
5268 5438 3.376935 CTCTGCGGTGCCAGGTAGG 62.377 68.421 0.00 0.00 41.84 3.18
5269 5439 3.706373 CTGCGGTGCCAGGTAGGT 61.706 66.667 0.00 0.00 40.61 3.08
5270 5440 3.958147 CTGCGGTGCCAGGTAGGTG 62.958 68.421 0.00 0.00 40.61 4.00
5271 5441 4.016706 GCGGTGCCAGGTAGGTGT 62.017 66.667 0.00 0.00 40.61 4.16
5272 5442 2.264794 CGGTGCCAGGTAGGTGTC 59.735 66.667 0.00 0.00 40.61 3.67
5273 5443 2.264794 GGTGCCAGGTAGGTGTCG 59.735 66.667 0.00 0.00 40.61 4.35
5274 5444 2.434359 GTGCCAGGTAGGTGTCGC 60.434 66.667 0.00 0.00 40.61 5.19
5275 5445 3.702048 TGCCAGGTAGGTGTCGCC 61.702 66.667 0.00 0.00 40.61 5.54
5276 5446 4.468689 GCCAGGTAGGTGTCGCCC 62.469 72.222 0.00 0.00 40.61 6.13
5277 5447 3.000819 CCAGGTAGGTGTCGCCCA 61.001 66.667 0.00 0.00 38.26 5.36
5278 5448 2.367202 CCAGGTAGGTGTCGCCCAT 61.367 63.158 0.00 0.00 38.26 4.00
5279 5449 1.602237 CAGGTAGGTGTCGCCCATT 59.398 57.895 0.00 0.00 38.26 3.16
5280 5450 0.035439 CAGGTAGGTGTCGCCCATTT 60.035 55.000 0.00 0.00 38.26 2.32
5281 5451 0.252197 AGGTAGGTGTCGCCCATTTC 59.748 55.000 0.00 0.00 38.26 2.17
5282 5452 0.035820 GGTAGGTGTCGCCCATTTCA 60.036 55.000 0.00 0.00 38.26 2.69
5283 5453 1.369625 GTAGGTGTCGCCCATTTCAG 58.630 55.000 0.00 0.00 38.26 3.02
5284 5454 0.981183 TAGGTGTCGCCCATTTCAGT 59.019 50.000 0.00 0.00 38.26 3.41
5285 5455 0.110486 AGGTGTCGCCCATTTCAGTT 59.890 50.000 0.00 0.00 38.26 3.16
5286 5456 0.958822 GGTGTCGCCCATTTCAGTTT 59.041 50.000 0.00 0.00 0.00 2.66
5287 5457 1.068541 GGTGTCGCCCATTTCAGTTTC 60.069 52.381 0.00 0.00 0.00 2.78
5288 5458 1.880027 GTGTCGCCCATTTCAGTTTCT 59.120 47.619 0.00 0.00 0.00 2.52
5289 5459 2.293399 GTGTCGCCCATTTCAGTTTCTT 59.707 45.455 0.00 0.00 0.00 2.52
5290 5460 2.955660 TGTCGCCCATTTCAGTTTCTTT 59.044 40.909 0.00 0.00 0.00 2.52
5291 5461 3.383185 TGTCGCCCATTTCAGTTTCTTTT 59.617 39.130 0.00 0.00 0.00 2.27
5292 5462 4.142049 TGTCGCCCATTTCAGTTTCTTTTT 60.142 37.500 0.00 0.00 0.00 1.94
5313 5483 7.703058 TTTTTAGGCCTCCTTTGATTTAGAG 57.297 36.000 9.68 0.00 34.61 2.43
5324 5494 9.323985 CTCCTTTGATTTAGAGGAATCTTGTAG 57.676 37.037 0.00 0.00 39.00 2.74
5325 5495 9.046846 TCCTTTGATTTAGAGGAATCTTGTAGA 57.953 33.333 0.00 0.00 36.67 2.59
5326 5496 9.672673 CCTTTGATTTAGAGGAATCTTGTAGAA 57.327 33.333 0.00 0.00 37.04 2.10
5336 5506 9.844257 AGAGGAATCTTGTAGAAATTTCATAGG 57.156 33.333 19.99 6.56 0.00 2.57
5337 5507 9.838339 GAGGAATCTTGTAGAAATTTCATAGGA 57.162 33.333 19.99 11.18 0.00 2.94
5379 5549 9.851686 AAAAATTTCTTTAGAGCCCTTTGATTT 57.148 25.926 0.00 0.00 0.00 2.17
5380 5550 8.837788 AAATTTCTTTAGAGCCCTTTGATTTG 57.162 30.769 0.00 0.00 0.00 2.32
5381 5551 6.976934 TTTCTTTAGAGCCCTTTGATTTGT 57.023 33.333 0.00 0.00 0.00 2.83
5382 5552 8.650143 ATTTCTTTAGAGCCCTTTGATTTGTA 57.350 30.769 0.00 0.00 0.00 2.41
5383 5553 7.687941 TTCTTTAGAGCCCTTTGATTTGTAG 57.312 36.000 0.00 0.00 0.00 2.74
5384 5554 6.180472 TCTTTAGAGCCCTTTGATTTGTAGG 58.820 40.000 0.00 0.00 0.00 3.18
5385 5555 5.772393 TTAGAGCCCTTTGATTTGTAGGA 57.228 39.130 0.00 0.00 0.00 2.94
5386 5556 4.657814 AGAGCCCTTTGATTTGTAGGAA 57.342 40.909 0.00 0.00 0.00 3.36
5387 5557 5.198602 AGAGCCCTTTGATTTGTAGGAAT 57.801 39.130 0.00 0.00 0.00 3.01
5388 5558 4.952335 AGAGCCCTTTGATTTGTAGGAATG 59.048 41.667 0.00 0.00 0.00 2.67
5389 5559 4.026052 AGCCCTTTGATTTGTAGGAATGG 58.974 43.478 0.00 0.00 0.00 3.16
5390 5560 4.023291 GCCCTTTGATTTGTAGGAATGGA 58.977 43.478 0.00 0.00 0.00 3.41
5391 5561 4.466015 GCCCTTTGATTTGTAGGAATGGAA 59.534 41.667 0.00 0.00 0.00 3.53
5392 5562 5.129320 GCCCTTTGATTTGTAGGAATGGAAT 59.871 40.000 0.00 0.00 0.00 3.01
5393 5563 6.683861 GCCCTTTGATTTGTAGGAATGGAATC 60.684 42.308 0.00 0.00 0.00 2.52
5394 5564 6.183360 CCCTTTGATTTGTAGGAATGGAATCC 60.183 42.308 0.00 0.00 39.96 3.01
5406 5576 6.642733 GGAATGGAATCCTATTCCTATGGA 57.357 41.667 23.95 0.29 45.66 3.41
5407 5577 6.657875 GGAATGGAATCCTATTCCTATGGAG 58.342 44.000 23.95 0.00 45.66 3.86
5408 5578 6.353429 GGAATGGAATCCTATTCCTATGGAGG 60.353 46.154 23.95 0.00 45.66 4.30
5409 5579 8.471702 GGAATGGAATCCTATTCCTATGGAGGA 61.472 44.444 23.95 0.00 45.66 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
267 268 2.093306 TTACACGATGCAGAGGTTGG 57.907 50.000 0.00 0.00 0.00 3.77
268 269 4.685169 AAATTACACGATGCAGAGGTTG 57.315 40.909 0.00 0.00 0.00 3.77
298 300 1.065782 TGGGACGGGACACAATGTATG 60.066 52.381 0.00 0.00 0.00 2.39
302 304 1.544724 AAATGGGACGGGACACAATG 58.455 50.000 0.00 0.00 0.00 2.82
303 305 3.443145 TTAAATGGGACGGGACACAAT 57.557 42.857 0.00 0.00 0.00 2.71
311 313 7.880195 AGAATTCAGATAGATTAAATGGGACGG 59.120 37.037 8.44 0.00 0.00 4.79
312 314 8.715998 CAGAATTCAGATAGATTAAATGGGACG 58.284 37.037 8.44 0.00 0.00 4.79
354 356 3.435186 GCCGCTCCCTTGCTGAAC 61.435 66.667 0.00 0.00 0.00 3.18
370 372 2.357034 TGTTCGGTGCCTTCTCGC 60.357 61.111 0.00 0.00 0.00 5.03
371 373 2.372690 CGTGTTCGGTGCCTTCTCG 61.373 63.158 0.00 0.00 0.00 4.04
426 428 2.119655 CCATTGCTGGAGCCAGAGC 61.120 63.158 20.29 7.23 46.37 4.09
497 503 0.860457 AGCCAGAAAAACCTCCCCTT 59.140 50.000 0.00 0.00 0.00 3.95
498 504 0.113190 CAGCCAGAAAAACCTCCCCT 59.887 55.000 0.00 0.00 0.00 4.79
559 565 1.886886 TGACATGGCATGGATGATCG 58.113 50.000 29.49 4.05 33.60 3.69
701 707 5.685728 AGAGGAACTAAATTGTGGATAGGC 58.314 41.667 0.00 0.00 41.55 3.93
864 870 9.558648 TTCACGAATCAATTCAGACAATAATTG 57.441 29.630 3.81 0.00 42.05 2.32
865 871 9.778993 CTTCACGAATCAATTCAGACAATAATT 57.221 29.630 3.81 0.00 36.61 1.40
921 927 1.319374 CGTAAGTACCATGCGTTCACG 59.681 52.381 0.00 0.00 43.27 4.35
1010 1016 6.520272 AGGATCAAGAAAACGAGAGGATATG 58.480 40.000 0.00 0.00 0.00 1.78
1147 1153 3.552604 TTCCTTTGTCGCATGCTAAAC 57.447 42.857 17.13 11.55 0.00 2.01
1276 1282 2.539953 CGAGCAATGACTAGAGGACGAC 60.540 54.545 0.00 0.00 0.00 4.34
1304 1310 0.400213 CAGGCACTACCCCAGACAAA 59.600 55.000 0.00 0.00 40.58 2.83
1313 1319 0.391793 GGCTTGACTCAGGCACTACC 60.392 60.000 14.53 0.00 38.23 3.18
1403 1409 3.291101 GAAGCCCACACCGTCGCTA 62.291 63.158 0.00 0.00 0.00 4.26
1857 1863 4.024893 TGAGCGAGACAAAACATTCTGAAC 60.025 41.667 0.00 0.00 0.00 3.18
2211 2220 9.238368 AGAAACCGGAAAATCAACTTTATATCA 57.762 29.630 9.46 0.00 0.00 2.15
2590 2599 8.055181 TCCATTTCAGTTATAGCTTCTTCCATT 58.945 33.333 0.00 0.00 0.00 3.16
2696 2723 4.971939 TCCTCATGAAGATGTTGTCAACA 58.028 39.130 20.28 20.28 46.94 3.33
2697 2724 5.065731 GGATCCTCATGAAGATGTTGTCAAC 59.934 44.000 11.60 8.86 0.00 3.18
2764 2791 7.083875 TCCATCTTTAGCAATAGGAAAAACG 57.916 36.000 0.00 0.00 0.00 3.60
2803 2830 2.437281 GGATCAGGAGAAGATTGCCAGA 59.563 50.000 0.00 0.00 0.00 3.86
2897 2924 1.152963 AGTGGCCTGACGTTTGCTT 60.153 52.632 3.32 0.00 0.00 3.91
2900 2927 4.454948 TCAGTGGCCTGACGTTTG 57.545 55.556 3.32 0.00 42.80 2.93
3408 3435 2.159179 TGCTGTCTACCTCTATGCCA 57.841 50.000 0.00 0.00 0.00 4.92
3479 3508 6.770303 TGATCAGTTGGACAGAATAACAACAA 59.230 34.615 8.79 0.00 44.10 2.83
4027 4056 3.693085 CCATCAAGCAAAGCAGATACTGT 59.307 43.478 0.00 0.00 33.43 3.55
4065 4094 5.932303 CGTCAGGAAGAAGAAGATTTAACCA 59.068 40.000 0.00 0.00 0.00 3.67
4151 4184 2.483106 GGTCCTTTCTTTCGTAGTTGGC 59.517 50.000 0.00 0.00 0.00 4.52
4182 4215 4.077184 GTGTGGCGGGGTCGATCA 62.077 66.667 0.00 0.00 39.00 2.92
4224 4257 3.775654 GAGGGACCGAGCCAGTGG 61.776 72.222 4.20 4.20 0.00 4.00
4488 4525 0.953471 CATTTCTTCACCCGTCGGCA 60.953 55.000 5.50 0.00 0.00 5.69
4489 4526 1.794222 CATTTCTTCACCCGTCGGC 59.206 57.895 5.50 0.00 0.00 5.54
4490 4527 1.644786 GGCATTTCTTCACCCGTCGG 61.645 60.000 3.60 3.60 0.00 4.79
4513 4610 2.183478 TGCAACAAGATGATGTCCGT 57.817 45.000 0.00 0.00 31.81 4.69
4514 4611 3.557577 TTTGCAACAAGATGATGTCCG 57.442 42.857 0.00 0.00 31.81 4.79
4515 4612 5.343249 GGTATTTGCAACAAGATGATGTCC 58.657 41.667 0.00 0.00 31.81 4.02
4516 4613 5.343249 GGGTATTTGCAACAAGATGATGTC 58.657 41.667 0.00 0.00 31.81 3.06
4558 4655 1.934525 TGCACAACGAACTTAGCGAAA 59.065 42.857 0.00 0.00 0.00 3.46
4634 4738 3.752412 TGTCCGAATACTCAGTACACG 57.248 47.619 0.00 5.75 0.00 4.49
4656 4761 5.811399 AAAAGCCCACTTTAAAAGCAAAC 57.189 34.783 0.00 0.00 45.48 2.93
4679 4784 7.870445 GCAAACTACCTTGGATCATAACAAAAA 59.130 33.333 0.00 0.00 0.00 1.94
4680 4785 7.232534 AGCAAACTACCTTGGATCATAACAAAA 59.767 33.333 0.00 0.00 0.00 2.44
4681 4786 6.719370 AGCAAACTACCTTGGATCATAACAAA 59.281 34.615 0.00 0.00 0.00 2.83
4682 4787 6.245408 AGCAAACTACCTTGGATCATAACAA 58.755 36.000 0.00 0.00 0.00 2.83
4683 4788 5.815581 AGCAAACTACCTTGGATCATAACA 58.184 37.500 0.00 0.00 0.00 2.41
4684 4789 6.759497 AAGCAAACTACCTTGGATCATAAC 57.241 37.500 0.00 0.00 0.00 1.89
4685 4790 7.775053 AAAAGCAAACTACCTTGGATCATAA 57.225 32.000 0.00 0.00 0.00 1.90
4686 4791 8.871629 TTAAAAGCAAACTACCTTGGATCATA 57.128 30.769 0.00 0.00 0.00 2.15
4687 4792 7.775053 TTAAAAGCAAACTACCTTGGATCAT 57.225 32.000 0.00 0.00 0.00 2.45
4688 4793 7.286775 ACTTTAAAAGCAAACTACCTTGGATCA 59.713 33.333 0.00 0.00 0.00 2.92
4689 4794 7.595130 CACTTTAAAAGCAAACTACCTTGGATC 59.405 37.037 0.00 0.00 0.00 3.36
4690 4795 7.433680 CACTTTAAAAGCAAACTACCTTGGAT 58.566 34.615 0.00 0.00 0.00 3.41
4691 4796 6.183360 CCACTTTAAAAGCAAACTACCTTGGA 60.183 38.462 0.00 0.00 0.00 3.53
4692 4797 5.983118 CCACTTTAAAAGCAAACTACCTTGG 59.017 40.000 0.00 0.00 0.00 3.61
4693 4798 5.983118 CCCACTTTAAAAGCAAACTACCTTG 59.017 40.000 0.00 0.00 0.00 3.61
4694 4799 5.452776 GCCCACTTTAAAAGCAAACTACCTT 60.453 40.000 0.00 0.00 0.00 3.50
4695 4800 4.038763 GCCCACTTTAAAAGCAAACTACCT 59.961 41.667 0.00 0.00 0.00 3.08
4696 4801 4.202172 TGCCCACTTTAAAAGCAAACTACC 60.202 41.667 0.00 0.00 0.00 3.18
4697 4802 4.939271 TGCCCACTTTAAAAGCAAACTAC 58.061 39.130 0.00 0.00 0.00 2.73
4698 4803 5.599999 TTGCCCACTTTAAAAGCAAACTA 57.400 34.783 10.46 0.00 40.26 2.24
4847 4954 3.377172 CGGCTTTCCTCATAAAAATCGGT 59.623 43.478 0.00 0.00 0.00 4.69
4896 5066 1.298859 CCTCCTTGGAGGCGTTTTCG 61.299 60.000 21.32 0.00 41.84 3.46
4915 5085 0.179215 CGTTTGCTGACGCCATCTTC 60.179 55.000 0.00 0.00 36.12 2.87
4934 5104 4.748102 TGGAAGAATGTTGACGACTACAAC 59.252 41.667 6.26 8.82 45.07 3.32
4939 5109 4.638421 TGTTTTGGAAGAATGTTGACGACT 59.362 37.500 0.00 0.00 0.00 4.18
4943 5113 4.978580 GCTCTGTTTTGGAAGAATGTTGAC 59.021 41.667 0.00 0.00 0.00 3.18
4948 5118 5.159209 GTGATGCTCTGTTTTGGAAGAATG 58.841 41.667 0.00 0.00 0.00 2.67
4952 5122 3.304928 GGTGTGATGCTCTGTTTTGGAAG 60.305 47.826 0.00 0.00 0.00 3.46
4953 5123 2.622942 GGTGTGATGCTCTGTTTTGGAA 59.377 45.455 0.00 0.00 0.00 3.53
4954 5124 2.229792 GGTGTGATGCTCTGTTTTGGA 58.770 47.619 0.00 0.00 0.00 3.53
4955 5125 1.069022 CGGTGTGATGCTCTGTTTTGG 60.069 52.381 0.00 0.00 0.00 3.28
4956 5126 1.872952 TCGGTGTGATGCTCTGTTTTG 59.127 47.619 0.00 0.00 0.00 2.44
4957 5127 2.254546 TCGGTGTGATGCTCTGTTTT 57.745 45.000 0.00 0.00 0.00 2.43
4958 5128 2.479566 ATCGGTGTGATGCTCTGTTT 57.520 45.000 0.00 0.00 35.45 2.83
4967 5137 0.249120 TCTTTCGCCATCGGTGTGAT 59.751 50.000 0.00 0.00 38.01 3.06
4968 5138 0.034198 TTCTTTCGCCATCGGTGTGA 59.966 50.000 0.00 0.00 34.40 3.58
4969 5139 1.086696 ATTCTTTCGCCATCGGTGTG 58.913 50.000 0.00 0.00 34.40 3.82
4970 5140 2.277084 GTATTCTTTCGCCATCGGTGT 58.723 47.619 0.00 0.00 34.40 4.16
4971 5141 1.257936 CGTATTCTTTCGCCATCGGTG 59.742 52.381 0.00 0.00 36.13 4.94
4972 5142 1.567504 CGTATTCTTTCGCCATCGGT 58.432 50.000 0.00 0.00 36.13 4.69
4973 5143 0.859232 CCGTATTCTTTCGCCATCGG 59.141 55.000 0.00 0.00 36.13 4.18
4974 5144 1.521423 GACCGTATTCTTTCGCCATCG 59.479 52.381 0.00 0.00 0.00 3.84
4975 5145 1.865340 GGACCGTATTCTTTCGCCATC 59.135 52.381 0.00 0.00 0.00 3.51
4976 5146 1.805120 CGGACCGTATTCTTTCGCCAT 60.805 52.381 5.48 0.00 0.00 4.40
4977 5147 0.458889 CGGACCGTATTCTTTCGCCA 60.459 55.000 5.48 0.00 0.00 5.69
4978 5148 1.149964 CCGGACCGTATTCTTTCGCC 61.150 60.000 13.94 0.00 0.00 5.54
4979 5149 0.459063 ACCGGACCGTATTCTTTCGC 60.459 55.000 9.46 0.00 0.00 4.70
4980 5150 1.274596 CACCGGACCGTATTCTTTCG 58.725 55.000 9.46 0.00 0.00 3.46
4981 5151 1.004595 GCACCGGACCGTATTCTTTC 58.995 55.000 9.46 0.00 0.00 2.62
4982 5152 0.611714 AGCACCGGACCGTATTCTTT 59.388 50.000 9.46 0.00 0.00 2.52
4983 5153 0.611714 AAGCACCGGACCGTATTCTT 59.388 50.000 9.46 7.53 0.00 2.52
4984 5154 1.477553 TAAGCACCGGACCGTATTCT 58.522 50.000 9.46 1.28 0.00 2.40
4985 5155 2.132762 CATAAGCACCGGACCGTATTC 58.867 52.381 9.46 0.00 0.00 1.75
4986 5156 1.202604 CCATAAGCACCGGACCGTATT 60.203 52.381 9.46 4.39 0.00 1.89
4987 5157 0.391597 CCATAAGCACCGGACCGTAT 59.608 55.000 9.46 3.51 0.00 3.06
4988 5158 0.683828 TCCATAAGCACCGGACCGTA 60.684 55.000 9.46 0.85 0.00 4.02
4989 5159 1.546589 TTCCATAAGCACCGGACCGT 61.547 55.000 9.46 0.00 0.00 4.83
4990 5160 0.391927 TTTCCATAAGCACCGGACCG 60.392 55.000 9.46 6.99 0.00 4.79
4991 5161 1.065709 TCTTTCCATAAGCACCGGACC 60.066 52.381 9.46 0.00 0.00 4.46
4992 5162 2.396590 TCTTTCCATAAGCACCGGAC 57.603 50.000 9.46 0.00 0.00 4.79
4993 5163 2.503765 TCATCTTTCCATAAGCACCGGA 59.496 45.455 9.46 0.00 0.00 5.14
4994 5164 2.917933 TCATCTTTCCATAAGCACCGG 58.082 47.619 0.00 0.00 0.00 5.28
4995 5165 3.251729 CCATCATCTTTCCATAAGCACCG 59.748 47.826 0.00 0.00 0.00 4.94
4996 5166 3.005155 GCCATCATCTTTCCATAAGCACC 59.995 47.826 0.00 0.00 0.00 5.01
4997 5167 3.304257 CGCCATCATCTTTCCATAAGCAC 60.304 47.826 0.00 0.00 0.00 4.40
4998 5168 2.880268 CGCCATCATCTTTCCATAAGCA 59.120 45.455 0.00 0.00 0.00 3.91
4999 5169 2.227388 CCGCCATCATCTTTCCATAAGC 59.773 50.000 0.00 0.00 0.00 3.09
5000 5170 3.251729 CACCGCCATCATCTTTCCATAAG 59.748 47.826 0.00 0.00 0.00 1.73
5001 5171 3.213506 CACCGCCATCATCTTTCCATAA 58.786 45.455 0.00 0.00 0.00 1.90
5002 5172 2.172505 ACACCGCCATCATCTTTCCATA 59.827 45.455 0.00 0.00 0.00 2.74
5003 5173 1.064463 ACACCGCCATCATCTTTCCAT 60.064 47.619 0.00 0.00 0.00 3.41
5004 5174 0.327924 ACACCGCCATCATCTTTCCA 59.672 50.000 0.00 0.00 0.00 3.53
5005 5175 1.463674 AACACCGCCATCATCTTTCC 58.536 50.000 0.00 0.00 0.00 3.13
5006 5176 2.228822 ACAAACACCGCCATCATCTTTC 59.771 45.455 0.00 0.00 0.00 2.62
5007 5177 2.238521 ACAAACACCGCCATCATCTTT 58.761 42.857 0.00 0.00 0.00 2.52
5008 5178 1.909700 ACAAACACCGCCATCATCTT 58.090 45.000 0.00 0.00 0.00 2.40
5009 5179 1.909700 AACAAACACCGCCATCATCT 58.090 45.000 0.00 0.00 0.00 2.90
5010 5180 2.030363 TCAAACAAACACCGCCATCATC 60.030 45.455 0.00 0.00 0.00 2.92
5011 5181 1.959985 TCAAACAAACACCGCCATCAT 59.040 42.857 0.00 0.00 0.00 2.45
5012 5182 1.066303 GTCAAACAAACACCGCCATCA 59.934 47.619 0.00 0.00 0.00 3.07
5013 5183 1.066303 TGTCAAACAAACACCGCCATC 59.934 47.619 0.00 0.00 0.00 3.51
5014 5184 1.066908 CTGTCAAACAAACACCGCCAT 59.933 47.619 0.00 0.00 0.00 4.40
5015 5185 0.453793 CTGTCAAACAAACACCGCCA 59.546 50.000 0.00 0.00 0.00 5.69
5016 5186 0.736053 TCTGTCAAACAAACACCGCC 59.264 50.000 0.00 0.00 0.00 6.13
5017 5187 2.032799 TCATCTGTCAAACAAACACCGC 59.967 45.455 0.00 0.00 0.00 5.68
5018 5188 3.961477 TCATCTGTCAAACAAACACCG 57.039 42.857 0.00 0.00 0.00 4.94
5019 5189 5.437289 TCATCATCTGTCAAACAAACACC 57.563 39.130 0.00 0.00 0.00 4.16
5020 5190 7.568134 GCATTTCATCATCTGTCAAACAAACAC 60.568 37.037 0.00 0.00 0.00 3.32
5021 5191 6.421501 GCATTTCATCATCTGTCAAACAAACA 59.578 34.615 0.00 0.00 0.00 2.83
5022 5192 6.399249 CGCATTTCATCATCTGTCAAACAAAC 60.399 38.462 0.00 0.00 0.00 2.93
5023 5193 5.630264 CGCATTTCATCATCTGTCAAACAAA 59.370 36.000 0.00 0.00 0.00 2.83
5024 5194 5.048852 TCGCATTTCATCATCTGTCAAACAA 60.049 36.000 0.00 0.00 0.00 2.83
5025 5195 4.455190 TCGCATTTCATCATCTGTCAAACA 59.545 37.500 0.00 0.00 0.00 2.83
5026 5196 4.973396 TCGCATTTCATCATCTGTCAAAC 58.027 39.130 0.00 0.00 0.00 2.93
5027 5197 4.937015 TCTCGCATTTCATCATCTGTCAAA 59.063 37.500 0.00 0.00 0.00 2.69
5028 5198 4.506758 TCTCGCATTTCATCATCTGTCAA 58.493 39.130 0.00 0.00 0.00 3.18
5029 5199 4.117685 CTCTCGCATTTCATCATCTGTCA 58.882 43.478 0.00 0.00 0.00 3.58
5030 5200 4.118410 ACTCTCGCATTTCATCATCTGTC 58.882 43.478 0.00 0.00 0.00 3.51
5031 5201 4.134379 ACTCTCGCATTTCATCATCTGT 57.866 40.909 0.00 0.00 0.00 3.41
5032 5202 4.260661 CCAACTCTCGCATTTCATCATCTG 60.261 45.833 0.00 0.00 0.00 2.90
5033 5203 3.875727 CCAACTCTCGCATTTCATCATCT 59.124 43.478 0.00 0.00 0.00 2.90
5034 5204 3.547613 GCCAACTCTCGCATTTCATCATC 60.548 47.826 0.00 0.00 0.00 2.92
5035 5205 2.357009 GCCAACTCTCGCATTTCATCAT 59.643 45.455 0.00 0.00 0.00 2.45
5036 5206 1.739466 GCCAACTCTCGCATTTCATCA 59.261 47.619 0.00 0.00 0.00 3.07
5037 5207 1.739466 TGCCAACTCTCGCATTTCATC 59.261 47.619 0.00 0.00 0.00 2.92
5038 5208 1.470098 GTGCCAACTCTCGCATTTCAT 59.530 47.619 0.00 0.00 37.33 2.57
5039 5209 0.874390 GTGCCAACTCTCGCATTTCA 59.126 50.000 0.00 0.00 37.33 2.69
5040 5210 1.135859 CAGTGCCAACTCTCGCATTTC 60.136 52.381 0.00 0.00 37.33 2.17
5041 5211 0.877071 CAGTGCCAACTCTCGCATTT 59.123 50.000 0.00 0.00 37.33 2.32
5042 5212 0.957395 CCAGTGCCAACTCTCGCATT 60.957 55.000 0.00 0.00 37.33 3.56
5043 5213 1.376424 CCAGTGCCAACTCTCGCAT 60.376 57.895 0.00 0.00 37.33 4.73
5044 5214 2.031012 CCAGTGCCAACTCTCGCA 59.969 61.111 0.00 0.00 32.98 5.10
5045 5215 2.029844 GACCAGTGCCAACTCTCGC 61.030 63.158 0.00 0.00 32.98 5.03
5046 5216 0.034059 AAGACCAGTGCCAACTCTCG 59.966 55.000 0.00 0.00 32.98 4.04
5047 5217 1.346068 AGAAGACCAGTGCCAACTCTC 59.654 52.381 0.00 0.00 32.98 3.20
5048 5218 1.428869 AGAAGACCAGTGCCAACTCT 58.571 50.000 0.00 0.00 32.98 3.24
5049 5219 3.618690 ATAGAAGACCAGTGCCAACTC 57.381 47.619 0.00 0.00 32.98 3.01
5050 5220 3.073062 ACAATAGAAGACCAGTGCCAACT 59.927 43.478 0.00 0.00 36.98 3.16
5051 5221 3.412386 ACAATAGAAGACCAGTGCCAAC 58.588 45.455 0.00 0.00 0.00 3.77
5052 5222 3.788227 ACAATAGAAGACCAGTGCCAA 57.212 42.857 0.00 0.00 0.00 4.52
5053 5223 4.564821 GGTTACAATAGAAGACCAGTGCCA 60.565 45.833 0.00 0.00 0.00 4.92
5054 5224 3.939592 GGTTACAATAGAAGACCAGTGCC 59.060 47.826 0.00 0.00 0.00 5.01
5055 5225 4.833390 AGGTTACAATAGAAGACCAGTGC 58.167 43.478 0.00 0.00 32.81 4.40
5056 5226 6.287589 AGAGGTTACAATAGAAGACCAGTG 57.712 41.667 0.00 0.00 32.81 3.66
5057 5227 9.134055 GTATAGAGGTTACAATAGAAGACCAGT 57.866 37.037 0.00 0.00 32.81 4.00
5058 5228 9.357161 AGTATAGAGGTTACAATAGAAGACCAG 57.643 37.037 0.00 0.00 32.81 4.00
5059 5229 9.710818 AAGTATAGAGGTTACAATAGAAGACCA 57.289 33.333 0.00 0.00 32.81 4.02
5067 5237 9.656323 ACCATCAGAAGTATAGAGGTTACAATA 57.344 33.333 0.00 0.00 0.00 1.90
5068 5238 8.554490 ACCATCAGAAGTATAGAGGTTACAAT 57.446 34.615 0.00 0.00 0.00 2.71
5069 5239 7.973048 ACCATCAGAAGTATAGAGGTTACAA 57.027 36.000 0.00 0.00 0.00 2.41
5070 5240 7.399191 ACAACCATCAGAAGTATAGAGGTTACA 59.601 37.037 0.00 0.00 36.43 2.41
5071 5241 7.707035 CACAACCATCAGAAGTATAGAGGTTAC 59.293 40.741 0.00 0.00 36.43 2.50
5072 5242 7.618117 TCACAACCATCAGAAGTATAGAGGTTA 59.382 37.037 0.00 0.00 36.43 2.85
5073 5243 6.440647 TCACAACCATCAGAAGTATAGAGGTT 59.559 38.462 0.00 0.00 38.55 3.50
5074 5244 5.958380 TCACAACCATCAGAAGTATAGAGGT 59.042 40.000 0.00 0.00 0.00 3.85
5075 5245 6.471233 TCACAACCATCAGAAGTATAGAGG 57.529 41.667 0.00 0.00 0.00 3.69
5076 5246 7.720442 TGATCACAACCATCAGAAGTATAGAG 58.280 38.462 0.00 0.00 0.00 2.43
5077 5247 7.660030 TGATCACAACCATCAGAAGTATAGA 57.340 36.000 0.00 0.00 0.00 1.98
5078 5248 7.984050 ACTTGATCACAACCATCAGAAGTATAG 59.016 37.037 0.00 0.00 31.84 1.31
5079 5249 7.851228 ACTTGATCACAACCATCAGAAGTATA 58.149 34.615 0.00 0.00 31.84 1.47
5080 5250 6.715280 ACTTGATCACAACCATCAGAAGTAT 58.285 36.000 0.00 0.00 31.84 2.12
5081 5251 6.114187 ACTTGATCACAACCATCAGAAGTA 57.886 37.500 0.00 0.00 31.84 2.24
5082 5252 4.978099 ACTTGATCACAACCATCAGAAGT 58.022 39.130 0.00 0.00 31.84 3.01
5083 5253 5.471116 TGAACTTGATCACAACCATCAGAAG 59.529 40.000 0.00 0.00 31.84 2.85
5084 5254 5.375773 TGAACTTGATCACAACCATCAGAA 58.624 37.500 0.00 0.00 31.84 3.02
5085 5255 4.971939 TGAACTTGATCACAACCATCAGA 58.028 39.130 0.00 0.00 31.84 3.27
5086 5256 5.471116 TCTTGAACTTGATCACAACCATCAG 59.529 40.000 0.00 0.00 31.84 2.90
5087 5257 5.375773 TCTTGAACTTGATCACAACCATCA 58.624 37.500 0.00 0.00 32.27 3.07
5088 5258 5.702670 TCTCTTGAACTTGATCACAACCATC 59.297 40.000 0.00 0.00 32.27 3.51
5089 5259 5.624159 TCTCTTGAACTTGATCACAACCAT 58.376 37.500 0.00 0.00 32.27 3.55
5090 5260 5.034852 TCTCTTGAACTTGATCACAACCA 57.965 39.130 0.00 0.00 32.27 3.67
5091 5261 5.618640 GCATCTCTTGAACTTGATCACAACC 60.619 44.000 0.00 0.00 32.27 3.77
5092 5262 5.180868 AGCATCTCTTGAACTTGATCACAAC 59.819 40.000 0.00 0.00 32.27 3.32
5093 5263 5.311265 AGCATCTCTTGAACTTGATCACAA 58.689 37.500 0.00 0.00 34.65 3.33
5094 5264 4.903054 AGCATCTCTTGAACTTGATCACA 58.097 39.130 0.00 0.00 0.00 3.58
5095 5265 4.332268 GGAGCATCTCTTGAACTTGATCAC 59.668 45.833 0.00 0.00 33.73 3.06
5096 5266 4.019950 TGGAGCATCTCTTGAACTTGATCA 60.020 41.667 0.00 0.00 33.73 2.92
5097 5267 4.511527 TGGAGCATCTCTTGAACTTGATC 58.488 43.478 0.00 0.00 33.73 2.92
5098 5268 4.224594 TCTGGAGCATCTCTTGAACTTGAT 59.775 41.667 0.00 0.00 33.73 2.57
5099 5269 3.580022 TCTGGAGCATCTCTTGAACTTGA 59.420 43.478 0.00 0.00 33.73 3.02
5100 5270 3.935315 TCTGGAGCATCTCTTGAACTTG 58.065 45.455 0.00 0.00 33.73 3.16
5101 5271 4.630644 TTCTGGAGCATCTCTTGAACTT 57.369 40.909 0.00 0.00 33.73 2.66
5102 5272 4.840716 ATTCTGGAGCATCTCTTGAACT 57.159 40.909 0.00 0.00 33.73 3.01
5103 5273 6.765036 TCAATATTCTGGAGCATCTCTTGAAC 59.235 38.462 0.00 0.00 33.73 3.18
5104 5274 6.892485 TCAATATTCTGGAGCATCTCTTGAA 58.108 36.000 0.00 0.00 33.73 2.69
5105 5275 6.490241 TCAATATTCTGGAGCATCTCTTGA 57.510 37.500 0.00 0.00 33.73 3.02
5106 5276 6.348622 GCATCAATATTCTGGAGCATCTCTTG 60.349 42.308 0.00 0.00 33.73 3.02
5107 5277 5.706369 GCATCAATATTCTGGAGCATCTCTT 59.294 40.000 0.00 0.00 33.73 2.85
5108 5278 5.221864 TGCATCAATATTCTGGAGCATCTCT 60.222 40.000 0.00 0.00 33.73 3.10
5109 5279 5.001874 TGCATCAATATTCTGGAGCATCTC 58.998 41.667 0.00 0.00 33.73 2.75
5110 5280 4.981812 TGCATCAATATTCTGGAGCATCT 58.018 39.130 0.00 0.00 33.73 2.90
5111 5281 5.163642 GGATGCATCAATATTCTGGAGCATC 60.164 44.000 27.25 19.42 44.37 3.91
5112 5282 4.705507 GGATGCATCAATATTCTGGAGCAT 59.294 41.667 27.25 0.00 38.80 3.79
5113 5283 4.077108 GGATGCATCAATATTCTGGAGCA 58.923 43.478 27.25 0.00 33.31 4.26
5114 5284 3.126514 CGGATGCATCAATATTCTGGAGC 59.873 47.826 27.25 4.99 0.00 4.70
5115 5285 4.321718 ACGGATGCATCAATATTCTGGAG 58.678 43.478 27.25 6.51 0.00 3.86
5116 5286 4.356405 ACGGATGCATCAATATTCTGGA 57.644 40.909 27.25 0.00 0.00 3.86
5117 5287 5.008911 TGAAACGGATGCATCAATATTCTGG 59.991 40.000 27.25 7.51 0.00 3.86
5118 5288 6.063640 TGAAACGGATGCATCAATATTCTG 57.936 37.500 27.25 8.69 0.00 3.02
5119 5289 6.698008 TTGAAACGGATGCATCAATATTCT 57.302 33.333 27.25 5.40 0.00 2.40
5120 5290 7.140705 TCATTGAAACGGATGCATCAATATTC 58.859 34.615 27.25 22.21 39.74 1.75
5121 5291 7.013559 TCTCATTGAAACGGATGCATCAATATT 59.986 33.333 27.25 15.77 39.74 1.28
5122 5292 6.487668 TCTCATTGAAACGGATGCATCAATAT 59.512 34.615 27.25 11.11 39.74 1.28
5123 5293 5.821995 TCTCATTGAAACGGATGCATCAATA 59.178 36.000 27.25 6.24 39.74 1.90
5124 5294 4.641541 TCTCATTGAAACGGATGCATCAAT 59.358 37.500 27.25 15.89 41.78 2.57
5125 5295 4.009002 TCTCATTGAAACGGATGCATCAA 58.991 39.130 27.25 14.28 36.35 2.57
5126 5296 3.608796 TCTCATTGAAACGGATGCATCA 58.391 40.909 27.25 5.09 0.00 3.07
5127 5297 4.274214 TCATCTCATTGAAACGGATGCATC 59.726 41.667 18.81 18.81 35.25 3.91
5128 5298 4.201657 TCATCTCATTGAAACGGATGCAT 58.798 39.130 0.00 0.00 35.25 3.96
5129 5299 3.608796 TCATCTCATTGAAACGGATGCA 58.391 40.909 8.16 0.00 35.25 3.96
5130 5300 4.142622 TGTTCATCTCATTGAAACGGATGC 60.143 41.667 8.16 0.00 37.36 3.91
5131 5301 5.550232 TGTTCATCTCATTGAAACGGATG 57.450 39.130 7.11 7.11 37.36 3.51
5132 5302 5.106157 GGTTGTTCATCTCATTGAAACGGAT 60.106 40.000 0.00 0.00 37.36 4.18
5133 5303 4.215399 GGTTGTTCATCTCATTGAAACGGA 59.785 41.667 0.00 0.00 37.36 4.69
5134 5304 4.216257 AGGTTGTTCATCTCATTGAAACGG 59.784 41.667 0.00 0.00 37.36 4.44
5135 5305 5.149273 CAGGTTGTTCATCTCATTGAAACG 58.851 41.667 0.00 0.00 37.36 3.60
5136 5306 4.919754 GCAGGTTGTTCATCTCATTGAAAC 59.080 41.667 0.00 0.00 37.36 2.78
5137 5307 4.828939 AGCAGGTTGTTCATCTCATTGAAA 59.171 37.500 0.00 0.00 37.36 2.69
5138 5308 4.401022 AGCAGGTTGTTCATCTCATTGAA 58.599 39.130 0.00 0.00 33.32 2.69
5139 5309 4.025040 AGCAGGTTGTTCATCTCATTGA 57.975 40.909 0.00 0.00 0.00 2.57
5140 5310 5.587443 TGATAGCAGGTTGTTCATCTCATTG 59.413 40.000 0.00 0.00 0.00 2.82
5141 5311 5.748402 TGATAGCAGGTTGTTCATCTCATT 58.252 37.500 0.00 0.00 0.00 2.57
5142 5312 5.363562 TGATAGCAGGTTGTTCATCTCAT 57.636 39.130 0.00 0.00 0.00 2.90
5143 5313 4.824479 TGATAGCAGGTTGTTCATCTCA 57.176 40.909 0.00 0.00 0.00 3.27
5144 5314 4.574013 CCTTGATAGCAGGTTGTTCATCTC 59.426 45.833 0.00 0.00 0.00 2.75
5145 5315 4.225942 TCCTTGATAGCAGGTTGTTCATCT 59.774 41.667 0.00 0.00 0.00 2.90
5146 5316 4.333926 GTCCTTGATAGCAGGTTGTTCATC 59.666 45.833 0.00 0.00 0.00 2.92
5147 5317 4.018960 AGTCCTTGATAGCAGGTTGTTCAT 60.019 41.667 0.00 0.00 0.00 2.57
5148 5318 3.327757 AGTCCTTGATAGCAGGTTGTTCA 59.672 43.478 0.00 0.00 0.00 3.18
5149 5319 3.944087 AGTCCTTGATAGCAGGTTGTTC 58.056 45.455 0.00 0.00 0.00 3.18
5150 5320 4.042187 AGAAGTCCTTGATAGCAGGTTGTT 59.958 41.667 0.00 0.00 0.00 2.83
5151 5321 3.584848 AGAAGTCCTTGATAGCAGGTTGT 59.415 43.478 0.00 0.00 0.00 3.32
5152 5322 4.081198 AGAGAAGTCCTTGATAGCAGGTTG 60.081 45.833 0.00 0.00 0.00 3.77
5153 5323 4.081198 CAGAGAAGTCCTTGATAGCAGGTT 60.081 45.833 0.00 0.00 0.00 3.50
5154 5324 3.450457 CAGAGAAGTCCTTGATAGCAGGT 59.550 47.826 0.00 0.00 0.00 4.00
5155 5325 3.703556 TCAGAGAAGTCCTTGATAGCAGG 59.296 47.826 0.00 0.00 0.00 4.85
5156 5326 4.998671 TCAGAGAAGTCCTTGATAGCAG 57.001 45.455 0.00 0.00 0.00 4.24
5157 5327 4.958581 TCATCAGAGAAGTCCTTGATAGCA 59.041 41.667 0.00 0.00 0.00 3.49
5158 5328 5.528043 TCATCAGAGAAGTCCTTGATAGC 57.472 43.478 0.00 0.00 0.00 2.97
5159 5329 7.231115 TCTCATCATCAGAGAAGTCCTTGATAG 59.769 40.741 0.00 0.00 39.07 2.08
5160 5330 7.065504 TCTCATCATCAGAGAAGTCCTTGATA 58.934 38.462 0.00 0.00 39.07 2.15
5161 5331 5.898397 TCTCATCATCAGAGAAGTCCTTGAT 59.102 40.000 0.00 0.00 39.07 2.57
5162 5332 5.267587 TCTCATCATCAGAGAAGTCCTTGA 58.732 41.667 0.00 0.00 39.07 3.02
5163 5333 5.595257 TCTCATCATCAGAGAAGTCCTTG 57.405 43.478 0.00 0.00 39.07 3.61
5164 5334 6.383436 TCAATCTCATCATCAGAGAAGTCCTT 59.617 38.462 0.00 0.00 44.56 3.36
5165 5335 5.898397 TCAATCTCATCATCAGAGAAGTCCT 59.102 40.000 0.00 0.00 44.56 3.85
5166 5336 6.159299 TCAATCTCATCATCAGAGAAGTCC 57.841 41.667 0.00 0.00 44.56 3.85
5167 5337 7.225145 CCTTTCAATCTCATCATCAGAGAAGTC 59.775 40.741 0.00 0.00 44.56 3.01
5168 5338 7.049133 CCTTTCAATCTCATCATCAGAGAAGT 58.951 38.462 0.00 0.00 44.56 3.01
5169 5339 6.483974 CCCTTTCAATCTCATCATCAGAGAAG 59.516 42.308 0.00 0.00 44.56 2.85
5170 5340 6.354938 CCCTTTCAATCTCATCATCAGAGAA 58.645 40.000 0.00 0.00 44.56 2.87
5171 5341 5.686913 GCCCTTTCAATCTCATCATCAGAGA 60.687 44.000 0.00 0.00 45.38 3.10
5172 5342 4.515944 GCCCTTTCAATCTCATCATCAGAG 59.484 45.833 0.00 0.00 34.42 3.35
5173 5343 4.080186 TGCCCTTTCAATCTCATCATCAGA 60.080 41.667 0.00 0.00 0.00 3.27
5174 5344 4.204799 TGCCCTTTCAATCTCATCATCAG 58.795 43.478 0.00 0.00 0.00 2.90
5175 5345 4.239428 TGCCCTTTCAATCTCATCATCA 57.761 40.909 0.00 0.00 0.00 3.07
5176 5346 5.786264 AATGCCCTTTCAATCTCATCATC 57.214 39.130 0.00 0.00 0.00 2.92
5177 5347 7.850935 AATAATGCCCTTTCAATCTCATCAT 57.149 32.000 0.00 0.00 0.00 2.45
5178 5348 7.342541 TCAAATAATGCCCTTTCAATCTCATCA 59.657 33.333 0.00 0.00 0.00 3.07
5179 5349 7.719483 TCAAATAATGCCCTTTCAATCTCATC 58.281 34.615 0.00 0.00 0.00 2.92
5180 5350 7.664552 TCAAATAATGCCCTTTCAATCTCAT 57.335 32.000 0.00 0.00 0.00 2.90
5181 5351 7.664552 ATCAAATAATGCCCTTTCAATCTCA 57.335 32.000 0.00 0.00 0.00 3.27
5182 5352 8.854117 AGTATCAAATAATGCCCTTTCAATCTC 58.146 33.333 0.00 0.00 0.00 2.75
5183 5353 8.773033 AGTATCAAATAATGCCCTTTCAATCT 57.227 30.769 0.00 0.00 0.00 2.40
5185 5355 9.646522 ACTAGTATCAAATAATGCCCTTTCAAT 57.353 29.630 0.00 0.00 0.00 2.57
5186 5356 8.902806 CACTAGTATCAAATAATGCCCTTTCAA 58.097 33.333 0.00 0.00 0.00 2.69
5187 5357 7.502226 CCACTAGTATCAAATAATGCCCTTTCA 59.498 37.037 0.00 0.00 0.00 2.69
5188 5358 7.502561 ACCACTAGTATCAAATAATGCCCTTTC 59.497 37.037 0.00 0.00 0.00 2.62
5189 5359 7.354312 ACCACTAGTATCAAATAATGCCCTTT 58.646 34.615 0.00 0.00 0.00 3.11
5190 5360 6.911308 ACCACTAGTATCAAATAATGCCCTT 58.089 36.000 0.00 0.00 0.00 3.95
5191 5361 6.515512 ACCACTAGTATCAAATAATGCCCT 57.484 37.500 0.00 0.00 0.00 5.19
5192 5362 6.016276 CCAACCACTAGTATCAAATAATGCCC 60.016 42.308 0.00 0.00 0.00 5.36
5193 5363 6.016276 CCCAACCACTAGTATCAAATAATGCC 60.016 42.308 0.00 0.00 0.00 4.40
5194 5364 6.016276 CCCCAACCACTAGTATCAAATAATGC 60.016 42.308 0.00 0.00 0.00 3.56
5195 5365 6.016276 GCCCCAACCACTAGTATCAAATAATG 60.016 42.308 0.00 0.00 0.00 1.90
5196 5366 6.068670 GCCCCAACCACTAGTATCAAATAAT 58.931 40.000 0.00 0.00 0.00 1.28
5197 5367 5.442391 GCCCCAACCACTAGTATCAAATAA 58.558 41.667 0.00 0.00 0.00 1.40
5198 5368 4.443739 CGCCCCAACCACTAGTATCAAATA 60.444 45.833 0.00 0.00 0.00 1.40
5199 5369 3.684413 CGCCCCAACCACTAGTATCAAAT 60.684 47.826 0.00 0.00 0.00 2.32
5200 5370 2.355310 CGCCCCAACCACTAGTATCAAA 60.355 50.000 0.00 0.00 0.00 2.69
5201 5371 1.208535 CGCCCCAACCACTAGTATCAA 59.791 52.381 0.00 0.00 0.00 2.57
5202 5372 0.828022 CGCCCCAACCACTAGTATCA 59.172 55.000 0.00 0.00 0.00 2.15
5203 5373 0.532196 GCGCCCCAACCACTAGTATC 60.532 60.000 0.00 0.00 0.00 2.24
5204 5374 1.268992 TGCGCCCCAACCACTAGTAT 61.269 55.000 4.18 0.00 0.00 2.12
5205 5375 1.914263 TGCGCCCCAACCACTAGTA 60.914 57.895 4.18 0.00 0.00 1.82
5206 5376 3.246112 TGCGCCCCAACCACTAGT 61.246 61.111 4.18 0.00 0.00 2.57
5207 5377 2.746277 GTGCGCCCCAACCACTAG 60.746 66.667 4.18 0.00 0.00 2.57
5208 5378 4.338710 GGTGCGCCCCAACCACTA 62.339 66.667 3.18 0.00 0.00 2.74
5214 5384 4.652131 ATCAACGGTGCGCCCCAA 62.652 61.111 10.26 0.00 0.00 4.12
5221 5391 4.166011 GAGGCGCATCAACGGTGC 62.166 66.667 18.55 0.00 40.91 5.01
5222 5392 3.499737 GGAGGCGCATCAACGGTG 61.500 66.667 24.79 0.00 0.00 4.94
5223 5393 3.706373 AGGAGGCGCATCAACGGT 61.706 61.111 24.79 0.00 0.00 4.83
5224 5394 3.197790 CAGGAGGCGCATCAACGG 61.198 66.667 24.79 4.16 0.00 4.44
5225 5395 2.125552 TCAGGAGGCGCATCAACG 60.126 61.111 24.79 11.17 0.00 4.10
5226 5396 2.467826 GCTCAGGAGGCGCATCAAC 61.468 63.158 24.79 7.34 0.00 3.18
5227 5397 2.124983 GCTCAGGAGGCGCATCAA 60.125 61.111 24.79 7.61 0.00 2.57
5228 5398 4.519437 CGCTCAGGAGGCGCATCA 62.519 66.667 24.79 1.95 45.83 3.07
5245 5415 4.704833 TGGCACCGCAGAGCTTCC 62.705 66.667 0.00 0.00 0.00 3.46
5246 5416 3.123620 CTGGCACCGCAGAGCTTC 61.124 66.667 0.00 0.00 0.00 3.86
5247 5417 4.711949 CCTGGCACCGCAGAGCTT 62.712 66.667 0.00 0.00 0.00 3.74
5249 5419 4.082523 TACCTGGCACCGCAGAGC 62.083 66.667 0.00 0.00 0.00 4.09
5250 5420 2.185350 CTACCTGGCACCGCAGAG 59.815 66.667 0.00 0.00 0.00 3.35
5251 5421 3.390521 CCTACCTGGCACCGCAGA 61.391 66.667 0.00 0.00 0.00 4.26
5252 5422 3.706373 ACCTACCTGGCACCGCAG 61.706 66.667 0.00 0.00 40.22 5.18
5253 5423 4.015406 CACCTACCTGGCACCGCA 62.015 66.667 0.00 0.00 40.22 5.69
5254 5424 3.952628 GACACCTACCTGGCACCGC 62.953 68.421 0.00 0.00 40.22 5.68
5255 5425 2.264794 GACACCTACCTGGCACCG 59.735 66.667 0.00 0.00 40.22 4.94
5256 5426 2.264794 CGACACCTACCTGGCACC 59.735 66.667 0.00 0.00 40.22 5.01
5257 5427 2.434359 GCGACACCTACCTGGCAC 60.434 66.667 0.00 0.00 40.22 5.01
5258 5428 3.702048 GGCGACACCTACCTGGCA 61.702 66.667 0.00 0.00 40.22 4.92
5259 5429 4.468689 GGGCGACACCTACCTGGC 62.469 72.222 0.00 0.00 40.22 4.85
5260 5430 1.910580 AATGGGCGACACCTACCTGG 61.911 60.000 0.00 0.00 42.93 4.45
5261 5431 0.035439 AAATGGGCGACACCTACCTG 60.035 55.000 0.00 0.00 39.10 4.00
5262 5432 0.252197 GAAATGGGCGACACCTACCT 59.748 55.000 0.00 0.00 39.10 3.08
5263 5433 0.035820 TGAAATGGGCGACACCTACC 60.036 55.000 0.00 0.00 39.10 3.18
5264 5434 1.338769 ACTGAAATGGGCGACACCTAC 60.339 52.381 0.00 0.00 39.10 3.18
5265 5435 0.981183 ACTGAAATGGGCGACACCTA 59.019 50.000 0.00 0.00 39.10 3.08
5266 5436 0.110486 AACTGAAATGGGCGACACCT 59.890 50.000 0.00 0.00 39.10 4.00
5267 5437 0.958822 AAACTGAAATGGGCGACACC 59.041 50.000 0.00 0.00 37.93 4.16
5268 5438 1.880027 AGAAACTGAAATGGGCGACAC 59.120 47.619 0.00 0.00 0.00 3.67
5269 5439 2.270352 AGAAACTGAAATGGGCGACA 57.730 45.000 0.00 0.00 0.00 4.35
5270 5440 3.643159 AAAGAAACTGAAATGGGCGAC 57.357 42.857 0.00 0.00 0.00 5.19
5271 5441 4.664150 AAAAAGAAACTGAAATGGGCGA 57.336 36.364 0.00 0.00 0.00 5.54
5289 5459 6.663523 CCTCTAAATCAAAGGAGGCCTAAAAA 59.336 38.462 4.42 0.00 38.82 1.94
5290 5460 6.011981 TCCTCTAAATCAAAGGAGGCCTAAAA 60.012 38.462 4.42 0.00 43.46 1.52
5291 5461 5.491078 TCCTCTAAATCAAAGGAGGCCTAAA 59.509 40.000 4.42 0.00 43.46 1.85
5292 5462 5.036916 TCCTCTAAATCAAAGGAGGCCTAA 58.963 41.667 4.42 0.00 43.46 2.69
5293 5463 4.631234 TCCTCTAAATCAAAGGAGGCCTA 58.369 43.478 4.42 0.00 43.46 3.93
5294 5464 3.464828 TCCTCTAAATCAAAGGAGGCCT 58.535 45.455 3.86 3.86 43.46 5.19
5295 5465 3.933861 TCCTCTAAATCAAAGGAGGCC 57.066 47.619 0.00 0.00 43.46 5.19
5296 5466 5.689835 AGATTCCTCTAAATCAAAGGAGGC 58.310 41.667 0.00 0.00 43.46 4.70
5297 5467 7.115414 ACAAGATTCCTCTAAATCAAAGGAGG 58.885 38.462 0.00 0.00 44.69 4.30
5298 5468 9.323985 CTACAAGATTCCTCTAAATCAAAGGAG 57.676 37.037 0.00 0.00 40.21 3.69
5299 5469 9.046846 TCTACAAGATTCCTCTAAATCAAAGGA 57.953 33.333 0.00 0.00 37.98 3.36
5300 5470 9.672673 TTCTACAAGATTCCTCTAAATCAAAGG 57.327 33.333 0.00 0.00 37.98 3.11
5310 5480 9.844257 CCTATGAAATTTCTACAAGATTCCTCT 57.156 33.333 18.64 0.00 0.00 3.69
5311 5481 9.838339 TCCTATGAAATTTCTACAAGATTCCTC 57.162 33.333 18.64 0.00 0.00 3.71
5353 5523 9.851686 AAATCAAAGGGCTCTAAAGAAATTTTT 57.148 25.926 0.00 0.00 0.00 1.94
5354 5524 9.276590 CAAATCAAAGGGCTCTAAAGAAATTTT 57.723 29.630 0.00 0.00 0.00 1.82
5355 5525 8.432013 ACAAATCAAAGGGCTCTAAAGAAATTT 58.568 29.630 0.00 0.00 0.00 1.82
5356 5526 7.966812 ACAAATCAAAGGGCTCTAAAGAAATT 58.033 30.769 0.00 0.00 0.00 1.82
5357 5527 7.544804 ACAAATCAAAGGGCTCTAAAGAAAT 57.455 32.000 0.00 0.00 0.00 2.17
5358 5528 6.976934 ACAAATCAAAGGGCTCTAAAGAAA 57.023 33.333 0.00 0.00 0.00 2.52
5359 5529 6.659242 CCTACAAATCAAAGGGCTCTAAAGAA 59.341 38.462 0.00 0.00 0.00 2.52
5360 5530 6.012858 TCCTACAAATCAAAGGGCTCTAAAGA 60.013 38.462 0.00 0.00 0.00 2.52
5361 5531 6.180472 TCCTACAAATCAAAGGGCTCTAAAG 58.820 40.000 0.00 0.00 0.00 1.85
5362 5532 6.134535 TCCTACAAATCAAAGGGCTCTAAA 57.865 37.500 0.00 0.00 0.00 1.85
5363 5533 5.772393 TCCTACAAATCAAAGGGCTCTAA 57.228 39.130 0.00 0.00 0.00 2.10
5364 5534 5.772393 TTCCTACAAATCAAAGGGCTCTA 57.228 39.130 0.00 0.00 0.00 2.43
5365 5535 4.657814 TTCCTACAAATCAAAGGGCTCT 57.342 40.909 0.00 0.00 0.00 4.09
5366 5536 4.098501 CCATTCCTACAAATCAAAGGGCTC 59.901 45.833 0.00 0.00 0.00 4.70
5367 5537 4.026052 CCATTCCTACAAATCAAAGGGCT 58.974 43.478 0.00 0.00 0.00 5.19
5368 5538 4.023291 TCCATTCCTACAAATCAAAGGGC 58.977 43.478 0.00 0.00 0.00 5.19
5369 5539 6.183360 GGATTCCATTCCTACAAATCAAAGGG 60.183 42.308 0.00 0.00 32.68 3.95
5370 5540 6.608808 AGGATTCCATTCCTACAAATCAAAGG 59.391 38.462 5.29 0.00 44.50 3.11
5371 5541 7.651027 AGGATTCCATTCCTACAAATCAAAG 57.349 36.000 5.29 0.00 44.50 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.