Multiple sequence alignment - TraesCS1A01G350300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G350300 chr1A 100.000 6072 0 0 1 6072 535202501 535196430 0.000000e+00 11213.0
1 TraesCS1A01G350300 chr1A 98.140 215 4 0 5858 6072 527245684 527245898 5.750000e-100 375.0
2 TraesCS1A01G350300 chr1B 95.058 2327 65 10 764 3077 594654004 594651715 0.000000e+00 3615.0
3 TraesCS1A01G350300 chr1B 96.468 2067 63 9 3058 5121 594651569 594649510 0.000000e+00 3404.0
4 TraesCS1A01G350300 chr1B 95.893 487 20 0 284 770 594655504 594655018 0.000000e+00 789.0
5 TraesCS1A01G350300 chr1B 95.380 368 17 0 5219 5586 594649190 594648823 2.440000e-163 586.0
6 TraesCS1A01G350300 chr1B 94.857 175 8 1 5586 5759 594648757 594648583 7.760000e-69 272.0
7 TraesCS1A01G350300 chr1B 93.370 181 7 4 1 180 594655679 594655503 4.670000e-66 263.0
8 TraesCS1A01G350300 chr1B 100.000 47 0 0 5119 5165 594649540 594649494 3.010000e-13 87.9
9 TraesCS1A01G350300 chr5A 88.116 1725 126 32 2925 4609 30203302 30204987 0.000000e+00 1977.0
10 TraesCS1A01G350300 chr5A 86.913 298 32 4 4794 5085 30212956 30213252 1.630000e-85 327.0
11 TraesCS1A01G350300 chr5A 90.086 232 22 1 2541 2772 30152642 30152872 3.560000e-77 300.0
12 TraesCS1A01G350300 chr5A 92.908 141 10 0 2213 2353 30152252 30152392 7.980000e-49 206.0
13 TraesCS1A01G350300 chr5A 94.545 110 6 0 176 285 363850901 363850792 2.910000e-38 171.0
14 TraesCS1A01G350300 chr5A 95.238 105 5 0 1118 1222 30151973 30152077 3.760000e-37 167.0
15 TraesCS1A01G350300 chr5A 86.747 166 2 8 2768 2929 30202479 30202628 3.760000e-37 167.0
16 TraesCS1A01G350300 chr5A 91.803 122 7 3 167 285 503040138 503040017 3.760000e-37 167.0
17 TraesCS1A01G350300 chr5A 91.228 114 7 3 1268 1378 30152093 30152206 1.050000e-32 152.0
18 TraesCS1A01G350300 chr5A 91.358 81 6 1 4602 4681 30212486 30212566 6.430000e-20 110.0
19 TraesCS1A01G350300 chr1D 98.092 891 14 3 284 1174 438829644 438828757 0.000000e+00 1548.0
20 TraesCS1A01G350300 chr1D 97.861 187 4 0 5673 5859 438808587 438808401 2.110000e-84 324.0
21 TraesCS1A01G350300 chr1D 91.160 181 13 3 1 180 438829821 438829643 6.080000e-60 243.0
22 TraesCS1A01G350300 chr7D 89.157 664 54 10 1584 2241 102298417 102299068 0.000000e+00 811.0
23 TraesCS1A01G350300 chr7D 82.123 895 62 31 385 1225 102295542 102296392 0.000000e+00 676.0
24 TraesCS1A01G350300 chr7D 84.426 610 73 18 4581 5188 102304201 102304790 1.130000e-161 580.0
25 TraesCS1A01G350300 chr7D 87.448 478 36 14 2872 3329 102301024 102301497 4.170000e-146 529.0
26 TraesCS1A01G350300 chr7D 84.270 356 34 6 3365 3715 102301497 102301835 1.630000e-85 327.0
27 TraesCS1A01G350300 chr7D 82.319 345 54 6 4174 4514 102303314 102303655 5.950000e-75 292.0
28 TraesCS1A01G350300 chr7D 95.413 109 5 0 3808 3916 102301846 102301954 2.250000e-39 174.0
29 TraesCS1A01G350300 chr7D 87.313 134 7 2 4054 4178 102302324 102302456 1.760000e-30 145.0
30 TraesCS1A01G350300 chr7D 91.892 74 4 2 1268 1339 102296401 102296474 1.080000e-17 102.0
31 TraesCS1A01G350300 chr7D 88.750 80 9 0 583 662 102295823 102295902 1.390000e-16 99.0
32 TraesCS1A01G350300 chr7A 88.704 540 53 7 1584 2118 106428862 106429398 0.000000e+00 652.0
33 TraesCS1A01G350300 chr7A 86.957 506 58 6 4581 5085 106440632 106441130 4.110000e-156 562.0
34 TraesCS1A01G350300 chr7A 89.802 353 23 9 2872 3215 106436597 106436945 2.010000e-119 440.0
35 TraesCS1A01G350300 chr7A 83.768 345 49 6 4174 4514 106439743 106440084 2.730000e-83 320.0
36 TraesCS1A01G350300 chr7A 94.393 107 6 0 179 285 16604203 16604309 1.350000e-36 165.0
37 TraesCS1A01G350300 chr7A 93.578 109 6 1 3808 3916 106437500 106437607 1.750000e-35 161.0
38 TraesCS1A01G350300 chr7A 86.567 134 8 4 4054 4178 106437853 106437985 8.210000e-29 139.0
39 TraesCS1A01G350300 chr4D 89.669 484 40 6 3933 4412 508554711 508554234 5.200000e-170 608.0
40 TraesCS1A01G350300 chr4D 97.664 214 5 0 5859 6072 56741429 56741216 9.610000e-98 368.0
41 TraesCS1A01G350300 chr2B 97.778 225 4 1 5848 6072 666484615 666484838 2.650000e-103 387.0
42 TraesCS1A01G350300 chr2B 95.370 108 5 0 179 286 443378054 443378161 8.090000e-39 172.0
43 TraesCS1A01G350300 chr2A 99.070 215 2 0 5858 6072 733160011 733160225 2.650000e-103 387.0
44 TraesCS1A01G350300 chr2A 97.235 217 6 0 5856 6072 777014413 777014629 9.610000e-98 368.0
45 TraesCS1A01G350300 chr2A 94.495 109 6 0 177 285 78333707 78333815 1.050000e-37 169.0
46 TraesCS1A01G350300 chr2A 93.694 111 7 0 175 285 63693675 63693565 3.760000e-37 167.0
47 TraesCS1A01G350300 chr5D 98.140 215 4 0 5858 6072 478444123 478443909 5.750000e-100 375.0
48 TraesCS1A01G350300 chr4A 98.131 214 4 0 5859 6072 617657128 617657341 2.070000e-99 374.0
49 TraesCS1A01G350300 chr4A 93.443 122 6 2 176 296 1232432 1232552 4.840000e-41 180.0
50 TraesCS1A01G350300 chr4A 94.545 110 6 0 176 285 274959736 274959845 2.910000e-38 171.0
51 TraesCS1A01G350300 chrUn 97.248 218 6 0 5855 6072 56924660 56924443 2.670000e-98 370.0
52 TraesCS1A01G350300 chr3B 97.235 217 6 0 5856 6072 155822830 155823046 9.610000e-98 368.0
53 TraesCS1A01G350300 chr3B 94.444 36 2 0 5499 5534 584740311 584740346 8.500000e-04 56.5
54 TraesCS1A01G350300 chr3D 94.495 109 6 0 177 285 103633179 103633287 1.050000e-37 169.0
55 TraesCS1A01G350300 chr3D 96.875 32 1 0 5502 5533 61319386 61319417 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G350300 chr1A 535196430 535202501 6071 True 11213.000000 11213 100.000000 1 6072 1 chr1A.!!$R1 6071
1 TraesCS1A01G350300 chr1B 594648583 594655679 7096 True 1288.128571 3615 95.860857 1 5759 7 chr1B.!!$R1 5758
2 TraesCS1A01G350300 chr5A 30202479 30204987 2508 False 1072.000000 1977 87.431500 2768 4609 2 chr5A.!!$F2 1841
3 TraesCS1A01G350300 chr5A 30212486 30213252 766 False 218.500000 327 89.135500 4602 5085 2 chr5A.!!$F3 483
4 TraesCS1A01G350300 chr5A 30151973 30152872 899 False 206.250000 300 92.365000 1118 2772 4 chr5A.!!$F1 1654
5 TraesCS1A01G350300 chr1D 438828757 438829821 1064 True 895.500000 1548 94.626000 1 1174 2 chr1D.!!$R2 1173
6 TraesCS1A01G350300 chr7D 102295542 102304790 9248 False 373.500000 811 87.311100 385 5188 10 chr7D.!!$F1 4803
7 TraesCS1A01G350300 chr7A 106428862 106429398 536 False 652.000000 652 88.704000 1584 2118 1 chr7A.!!$F2 534
8 TraesCS1A01G350300 chr7A 106436597 106441130 4533 False 324.400000 562 88.134400 2872 5085 5 chr7A.!!$F3 2213

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
462 465 0.394899 AACCCTAGGTACCTCGACCG 60.395 60.000 20.32 5.29 44.88 4.79 F
1633 4471 0.751277 TGTGAGTTGCAGTTGGGTGG 60.751 55.000 0.00 0.00 0.00 4.61 F
2618 6109 1.052287 GCGAGATTTTTGTTGCACGG 58.948 50.000 0.00 0.00 0.00 4.94 F
2632 6123 1.066502 TGCACGGTAAGCTAATGCAGA 60.067 47.619 6.27 0.00 41.18 4.26 F
3398 8526 3.466836 TCACATGGACTTCACTTGTCAC 58.533 45.455 0.00 0.00 36.26 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2146 4996 0.464373 TTGGATGGCGATGGAGCTTC 60.464 55.000 0.00 0.0 37.29 3.86 R
2637 6128 0.397941 CTCCTTCAGGCTGGTGTTCA 59.602 55.000 15.73 0.0 34.44 3.18 R
3559 8696 1.135972 GCTCGAAAGAAATCAAGCGCA 60.136 47.619 11.47 0.0 41.32 6.09 R
3560 8697 1.135972 TGCTCGAAAGAAATCAAGCGC 60.136 47.619 0.00 0.0 41.32 5.92 R
5247 13505 0.395862 TAAGGCCAGCTCGCTCTACT 60.396 55.000 5.01 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 87 1.001248 CGGGTCCCCACTCCTCTTA 59.999 63.158 1.00 0.00 35.37 2.10
94 96 2.160205 CCACTCCTCTTACTGTCGACA 58.840 52.381 18.88 18.88 0.00 4.35
180 182 7.148407 GGCTGTTGTGCATATGGAGTTATATAC 60.148 40.741 4.56 0.00 34.04 1.47
181 183 7.604164 GCTGTTGTGCATATGGAGTTATATACT 59.396 37.037 4.56 0.00 40.71 2.12
192 194 4.015764 GAGTTATATACTCCCTCCGTCCC 58.984 52.174 0.00 0.00 46.30 4.46
193 195 3.400322 AGTTATATACTCCCTCCGTCCCA 59.600 47.826 0.00 0.00 28.23 4.37
194 196 4.140853 AGTTATATACTCCCTCCGTCCCAA 60.141 45.833 0.00 0.00 28.23 4.12
195 197 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
196 198 2.191981 ATACTCCCTCCGTCCCAAAT 57.808 50.000 0.00 0.00 0.00 2.32
197 199 1.961133 TACTCCCTCCGTCCCAAATT 58.039 50.000 0.00 0.00 0.00 1.82
198 200 1.961133 ACTCCCTCCGTCCCAAATTA 58.039 50.000 0.00 0.00 0.00 1.40
199 201 1.558294 ACTCCCTCCGTCCCAAATTAC 59.442 52.381 0.00 0.00 0.00 1.89
200 202 1.838077 CTCCCTCCGTCCCAAATTACT 59.162 52.381 0.00 0.00 0.00 2.24
201 203 1.835531 TCCCTCCGTCCCAAATTACTC 59.164 52.381 0.00 0.00 0.00 2.59
202 204 1.472728 CCCTCCGTCCCAAATTACTCG 60.473 57.143 0.00 0.00 0.00 4.18
203 205 1.206371 CCTCCGTCCCAAATTACTCGT 59.794 52.381 0.00 0.00 0.00 4.18
204 206 2.537401 CTCCGTCCCAAATTACTCGTC 58.463 52.381 0.00 0.00 0.00 4.20
205 207 1.894466 TCCGTCCCAAATTACTCGTCA 59.106 47.619 0.00 0.00 0.00 4.35
206 208 1.997606 CCGTCCCAAATTACTCGTCAC 59.002 52.381 0.00 0.00 0.00 3.67
207 209 2.610976 CCGTCCCAAATTACTCGTCACA 60.611 50.000 0.00 0.00 0.00 3.58
208 210 2.666508 CGTCCCAAATTACTCGTCACAG 59.333 50.000 0.00 0.00 0.00 3.66
209 211 3.613193 CGTCCCAAATTACTCGTCACAGA 60.613 47.826 0.00 0.00 0.00 3.41
210 212 4.312443 GTCCCAAATTACTCGTCACAGAA 58.688 43.478 0.00 0.00 0.00 3.02
211 213 4.753107 GTCCCAAATTACTCGTCACAGAAA 59.247 41.667 0.00 0.00 0.00 2.52
212 214 5.411669 GTCCCAAATTACTCGTCACAGAAAT 59.588 40.000 0.00 0.00 0.00 2.17
213 215 5.411361 TCCCAAATTACTCGTCACAGAAATG 59.589 40.000 0.00 0.00 0.00 2.32
214 216 5.391950 CCCAAATTACTCGTCACAGAAATGG 60.392 44.000 0.00 0.00 0.00 3.16
215 217 5.411361 CCAAATTACTCGTCACAGAAATGGA 59.589 40.000 0.00 0.00 0.00 3.41
216 218 6.094048 CCAAATTACTCGTCACAGAAATGGAT 59.906 38.462 0.00 0.00 0.00 3.41
217 219 6.668541 AATTACTCGTCACAGAAATGGATG 57.331 37.500 0.00 0.00 0.00 3.51
218 220 3.685139 ACTCGTCACAGAAATGGATGT 57.315 42.857 0.00 0.00 0.00 3.06
219 221 4.801330 ACTCGTCACAGAAATGGATGTA 57.199 40.909 0.00 0.00 0.00 2.29
220 222 5.344743 ACTCGTCACAGAAATGGATGTAT 57.655 39.130 0.00 0.00 0.00 2.29
221 223 5.352284 ACTCGTCACAGAAATGGATGTATC 58.648 41.667 0.00 0.00 0.00 2.24
222 224 5.127845 ACTCGTCACAGAAATGGATGTATCT 59.872 40.000 0.00 0.00 0.00 1.98
223 225 6.321435 ACTCGTCACAGAAATGGATGTATCTA 59.679 38.462 0.00 0.00 0.00 1.98
224 226 6.739112 TCGTCACAGAAATGGATGTATCTAG 58.261 40.000 0.00 0.00 0.00 2.43
225 227 6.546034 TCGTCACAGAAATGGATGTATCTAGA 59.454 38.462 0.00 0.00 0.00 2.43
226 228 7.068226 TCGTCACAGAAATGGATGTATCTAGAA 59.932 37.037 0.00 0.00 0.00 2.10
227 229 7.168302 CGTCACAGAAATGGATGTATCTAGAAC 59.832 40.741 0.00 0.00 0.00 3.01
228 230 8.200792 GTCACAGAAATGGATGTATCTAGAACT 58.799 37.037 0.00 0.00 0.00 3.01
229 231 9.421399 TCACAGAAATGGATGTATCTAGAACTA 57.579 33.333 0.00 0.00 0.00 2.24
258 260 6.625362 ACATCTAGATACATCCATACTTGCG 58.375 40.000 4.54 0.00 0.00 4.85
259 261 6.434340 ACATCTAGATACATCCATACTTGCGA 59.566 38.462 4.54 0.00 0.00 5.10
260 262 7.123397 ACATCTAGATACATCCATACTTGCGAT 59.877 37.037 4.54 0.00 0.00 4.58
261 263 8.624776 CATCTAGATACATCCATACTTGCGATA 58.375 37.037 4.54 0.00 0.00 2.92
262 264 8.575649 TCTAGATACATCCATACTTGCGATAA 57.424 34.615 0.00 0.00 0.00 1.75
263 265 8.678199 TCTAGATACATCCATACTTGCGATAAG 58.322 37.037 0.00 0.00 0.00 1.73
264 266 7.233389 AGATACATCCATACTTGCGATAAGT 57.767 36.000 9.87 9.87 0.00 2.24
265 267 8.349568 AGATACATCCATACTTGCGATAAGTA 57.650 34.615 12.98 12.98 37.18 2.24
266 268 8.803235 AGATACATCCATACTTGCGATAAGTAA 58.197 33.333 14.14 2.47 36.45 2.24
267 269 9.587772 GATACATCCATACTTGCGATAAGTAAT 57.412 33.333 14.14 4.62 36.45 1.89
268 270 9.944376 ATACATCCATACTTGCGATAAGTAATT 57.056 29.630 14.14 0.42 36.45 1.40
269 271 8.677148 ACATCCATACTTGCGATAAGTAATTT 57.323 30.769 14.14 0.00 36.45 1.82
270 272 8.559536 ACATCCATACTTGCGATAAGTAATTTG 58.440 33.333 14.14 9.54 36.45 2.32
271 273 8.773645 CATCCATACTTGCGATAAGTAATTTGA 58.226 33.333 14.14 9.82 36.45 2.69
272 274 8.725405 TCCATACTTGCGATAAGTAATTTGAA 57.275 30.769 14.14 0.00 36.45 2.69
273 275 9.168451 TCCATACTTGCGATAAGTAATTTGAAA 57.832 29.630 14.14 0.00 36.45 2.69
274 276 9.221775 CCATACTTGCGATAAGTAATTTGAAAC 57.778 33.333 14.14 0.00 36.45 2.78
275 277 8.933955 CATACTTGCGATAAGTAATTTGAAACG 58.066 33.333 14.14 0.00 36.45 3.60
276 278 7.124347 ACTTGCGATAAGTAATTTGAAACGA 57.876 32.000 3.98 0.00 0.00 3.85
277 279 7.577979 ACTTGCGATAAGTAATTTGAAACGAA 58.422 30.769 3.98 0.00 0.00 3.85
278 280 7.744715 ACTTGCGATAAGTAATTTGAAACGAAG 59.255 33.333 3.98 0.00 0.00 3.79
279 281 6.539324 TGCGATAAGTAATTTGAAACGAAGG 58.461 36.000 0.00 0.00 0.00 3.46
280 282 5.963586 GCGATAAGTAATTTGAAACGAAGGG 59.036 40.000 0.00 0.00 0.00 3.95
281 283 6.183360 GCGATAAGTAATTTGAAACGAAGGGA 60.183 38.462 0.00 0.00 0.00 4.20
282 284 7.399523 CGATAAGTAATTTGAAACGAAGGGAG 58.600 38.462 0.00 0.00 0.00 4.30
283 285 7.064253 CGATAAGTAATTTGAAACGAAGGGAGT 59.936 37.037 0.00 0.00 0.00 3.85
284 286 9.374838 GATAAGTAATTTGAAACGAAGGGAGTA 57.625 33.333 0.00 0.00 0.00 2.59
462 465 0.394899 AACCCTAGGTACCTCGACCG 60.395 60.000 20.32 5.29 44.88 4.79
465 468 0.822532 CCTAGGTACCTCGACCGCAT 60.823 60.000 20.32 0.00 44.88 4.73
663 697 2.478335 AATTCGCCGCCTCCTCCAAA 62.478 55.000 0.00 0.00 0.00 3.28
923 1985 3.589542 TGCCCCAAAGACCCCCTG 61.590 66.667 0.00 0.00 0.00 4.45
937 1999 1.077429 CCCTGACCTTAGCCCTTGC 60.077 63.158 0.00 0.00 37.95 4.01
1244 2318 4.320608 TTTGGTTTGGTTCATGCTTCTC 57.679 40.909 0.00 0.00 0.00 2.87
1467 2556 2.746904 TGGCGAAAATGTGTGGATAGTG 59.253 45.455 0.00 0.00 0.00 2.74
1502 2591 3.074538 AGCCAAATATGATAGTCACCCCC 59.925 47.826 0.00 0.00 0.00 5.40
1633 4471 0.751277 TGTGAGTTGCAGTTGGGTGG 60.751 55.000 0.00 0.00 0.00 4.61
1666 4504 5.512942 TCATCCAAACCTGTTTCTGGATA 57.487 39.130 13.31 3.80 34.84 2.59
1667 4505 5.886609 TCATCCAAACCTGTTTCTGGATAA 58.113 37.500 13.31 0.68 34.84 1.75
1730 4571 4.789012 TGCATTTCATGAAAGGACTTCC 57.211 40.909 31.10 16.14 34.35 3.46
1909 4750 1.404391 CTGCATCAAAGCCATCACTCC 59.596 52.381 0.00 0.00 0.00 3.85
1967 4810 5.447954 CCTTGTAGTCTGTAGTGACGATCAG 60.448 48.000 0.00 0.00 41.47 2.90
2132 4982 3.378427 GCCTGTTCATGATCCCAACTTAC 59.622 47.826 0.00 0.00 0.00 2.34
2145 4995 2.932614 CCAACTTACGATTCTCTGCTGG 59.067 50.000 0.00 0.00 0.00 4.85
2146 4996 2.932614 CAACTTACGATTCTCTGCTGGG 59.067 50.000 0.00 0.00 0.00 4.45
2147 4997 2.457598 ACTTACGATTCTCTGCTGGGA 58.542 47.619 0.00 0.00 0.00 4.37
2260 5111 1.151668 CCGCAGTTCTCAGAAACCAG 58.848 55.000 0.00 0.00 0.00 4.00
2374 5860 7.147759 TGGAGAGGAATAGTTGAGAAGATGAAG 60.148 40.741 0.00 0.00 0.00 3.02
2423 5910 3.736759 GGAAAAGACACGAGAGAGTTCAC 59.263 47.826 0.00 0.00 34.22 3.18
2450 5937 1.398692 TTTTGCCCAGAGTGGTGAAC 58.601 50.000 0.00 0.00 35.17 3.18
2521 6012 1.142870 TGTTTTCTCCCACCACCTGAG 59.857 52.381 0.00 0.00 0.00 3.35
2618 6109 1.052287 GCGAGATTTTTGTTGCACGG 58.948 50.000 0.00 0.00 0.00 4.94
2629 6120 1.466950 TGTTGCACGGTAAGCTAATGC 59.533 47.619 0.00 0.00 40.05 3.56
2632 6123 1.066502 TGCACGGTAAGCTAATGCAGA 60.067 47.619 6.27 0.00 41.18 4.26
2637 6128 4.572389 CACGGTAAGCTAATGCAGAGAAAT 59.428 41.667 2.62 0.00 42.74 2.17
2693 6184 7.404671 AACTTAAGGTATTGCAAGTTATGGG 57.595 36.000 4.94 0.00 38.96 4.00
3148 8175 4.101430 CCAGGTGGCCTATGCATTTTATTT 59.899 41.667 3.54 0.00 40.13 1.40
3209 8237 4.623167 CACTATAAGTCCATGCGCACTATC 59.377 45.833 14.90 4.08 0.00 2.08
3226 8342 3.976654 ACTATCCATACATGCCAAGGAGT 59.023 43.478 0.00 0.00 0.00 3.85
3265 8382 8.140112 AGTCTAACAGAGAGTTAATGGTGATT 57.860 34.615 0.00 0.00 41.89 2.57
3398 8526 3.466836 TCACATGGACTTCACTTGTCAC 58.533 45.455 0.00 0.00 36.26 3.67
3560 8697 8.174733 AGATTGGGAATCTTGCAATAACTATG 57.825 34.615 0.00 0.00 45.75 2.23
3624 8761 3.012502 TGGTACCAAGGACTCATAGGACT 59.987 47.826 13.60 0.00 0.00 3.85
3633 8770 3.018149 GACTCATAGGACTGAACCGAGT 58.982 50.000 0.00 0.00 33.30 4.18
3947 9119 3.013921 TGGACCAGTGAGTGTTTTCAAC 58.986 45.455 0.00 0.00 0.00 3.18
3989 9186 9.557061 CTCATGCATATTTGATATAGCATACCT 57.443 33.333 0.00 0.00 37.62 3.08
4029 9350 6.276847 CAGTATAACAACCACTTTGCCAAAA 58.723 36.000 0.00 0.00 39.01 2.44
4191 11430 5.894298 ACTCATCTAATTGGCCTGTCATA 57.106 39.130 3.32 0.00 0.00 2.15
4512 11754 7.758613 TGCGAACATCGTACTCAAATATTTA 57.241 32.000 0.00 0.00 42.81 1.40
4786 12511 1.675310 CTTTGCGGAGGTGCATCCA 60.675 57.895 7.13 0.00 45.78 3.41
5040 13048 4.038162 TGTTGTTTTCCCCTTCATTTACGG 59.962 41.667 0.00 0.00 0.00 4.02
5090 13098 4.522022 CCTGATTTCTCTTGGTTTCTTGCT 59.478 41.667 0.00 0.00 0.00 3.91
5092 13100 6.207417 CCTGATTTCTCTTGGTTTCTTGCTTA 59.793 38.462 0.00 0.00 0.00 3.09
5093 13101 7.255590 CCTGATTTCTCTTGGTTTCTTGCTTAA 60.256 37.037 0.00 0.00 0.00 1.85
5094 13102 7.651808 TGATTTCTCTTGGTTTCTTGCTTAAG 58.348 34.615 0.00 0.00 0.00 1.85
5096 13104 6.619801 TTCTCTTGGTTTCTTGCTTAAGTC 57.380 37.500 4.02 0.00 0.00 3.01
5097 13105 5.930135 TCTCTTGGTTTCTTGCTTAAGTCT 58.070 37.500 4.02 0.00 0.00 3.24
5099 13107 7.506114 TCTCTTGGTTTCTTGCTTAAGTCTTA 58.494 34.615 4.02 0.00 0.00 2.10
5100 13108 7.990886 TCTCTTGGTTTCTTGCTTAAGTCTTAA 59.009 33.333 4.02 4.97 0.00 1.85
5101 13109 8.691661 TCTTGGTTTCTTGCTTAAGTCTTAAT 57.308 30.769 5.50 0.00 0.00 1.40
5103 13111 8.691661 TTGGTTTCTTGCTTAAGTCTTAATCT 57.308 30.769 5.50 0.00 0.00 2.40
5104 13112 8.099364 TGGTTTCTTGCTTAAGTCTTAATCTG 57.901 34.615 5.50 0.00 0.00 2.90
5105 13113 7.936847 TGGTTTCTTGCTTAAGTCTTAATCTGA 59.063 33.333 5.50 2.94 0.00 3.27
5106 13114 8.951243 GGTTTCTTGCTTAAGTCTTAATCTGAT 58.049 33.333 5.50 0.00 0.00 2.90
5109 13117 8.484641 TCTTGCTTAAGTCTTAATCTGATGTG 57.515 34.615 5.50 0.00 0.00 3.21
5110 13118 6.668541 TGCTTAAGTCTTAATCTGATGTGC 57.331 37.500 5.50 4.22 0.00 4.57
5111 13119 6.409704 TGCTTAAGTCTTAATCTGATGTGCT 58.590 36.000 5.50 0.00 0.00 4.40
5112 13120 7.555965 TGCTTAAGTCTTAATCTGATGTGCTA 58.444 34.615 5.50 0.00 0.00 3.49
5113 13121 7.708322 TGCTTAAGTCTTAATCTGATGTGCTAG 59.292 37.037 5.50 0.00 0.00 3.42
5114 13122 7.923344 GCTTAAGTCTTAATCTGATGTGCTAGA 59.077 37.037 5.50 0.00 0.00 2.43
5115 13123 9.462174 CTTAAGTCTTAATCTGATGTGCTAGAG 57.538 37.037 5.50 0.00 0.00 2.43
5116 13124 6.403866 AGTCTTAATCTGATGTGCTAGAGG 57.596 41.667 0.00 0.00 0.00 3.69
5117 13125 5.304101 AGTCTTAATCTGATGTGCTAGAGGG 59.696 44.000 0.00 0.00 0.00 4.30
5166 13174 2.412325 GGTTGCGTACGACAAGAAATGG 60.412 50.000 21.65 0.00 31.02 3.16
5167 13175 2.157834 TGCGTACGACAAGAAATGGT 57.842 45.000 21.65 0.00 0.00 3.55
5176 13184 1.682854 ACAAGAAATGGTGTGGTGCTG 59.317 47.619 0.00 0.00 0.00 4.41
5180 13188 1.412343 GAAATGGTGTGGTGCTGGTTT 59.588 47.619 0.00 0.00 0.00 3.27
5188 13196 2.331451 GTGCTGGTTTGTGGTCGC 59.669 61.111 0.00 0.00 0.00 5.19
5189 13197 2.124529 TGCTGGTTTGTGGTCGCA 60.125 55.556 0.00 0.00 0.00 5.10
5190 13198 1.528076 TGCTGGTTTGTGGTCGCAT 60.528 52.632 0.00 0.00 0.00 4.73
5191 13199 1.210155 GCTGGTTTGTGGTCGCATC 59.790 57.895 0.00 0.00 0.00 3.91
5192 13200 1.514678 GCTGGTTTGTGGTCGCATCA 61.515 55.000 0.00 0.00 0.00 3.07
5193 13201 0.950836 CTGGTTTGTGGTCGCATCAA 59.049 50.000 0.00 0.00 0.00 2.57
5194 13202 1.541147 CTGGTTTGTGGTCGCATCAAT 59.459 47.619 0.00 0.00 0.00 2.57
5195 13203 1.959985 TGGTTTGTGGTCGCATCAATT 59.040 42.857 0.00 0.00 0.00 2.32
5196 13204 2.363680 TGGTTTGTGGTCGCATCAATTT 59.636 40.909 0.00 0.00 0.00 1.82
5197 13205 2.730928 GGTTTGTGGTCGCATCAATTTG 59.269 45.455 0.00 0.00 0.00 2.32
5198 13206 3.380142 GTTTGTGGTCGCATCAATTTGT 58.620 40.909 0.00 0.00 0.00 2.83
5199 13207 3.724508 TTGTGGTCGCATCAATTTGTT 57.275 38.095 0.00 0.00 0.00 2.83
5200 13208 3.724508 TGTGGTCGCATCAATTTGTTT 57.275 38.095 0.00 0.00 0.00 2.83
5201 13209 4.052159 TGTGGTCGCATCAATTTGTTTT 57.948 36.364 0.00 0.00 0.00 2.43
5202 13210 4.437239 TGTGGTCGCATCAATTTGTTTTT 58.563 34.783 0.00 0.00 0.00 1.94
5247 13505 5.071788 AGTTCTTTGGTGGATTGTACTCTGA 59.928 40.000 0.00 0.00 0.00 3.27
5261 13519 0.662619 CTCTGAGTAGAGCGAGCTGG 59.337 60.000 0.84 0.00 43.62 4.85
5280 13538 2.377193 TGGCCTTATGGTAAGGTGTTGT 59.623 45.455 15.17 0.00 39.60 3.32
5338 13596 1.950216 TCGTTTGCACTTGTATTGGCA 59.050 42.857 0.00 0.00 0.00 4.92
5357 13615 4.897076 TGGCATCAGAATTTTAGCCATCAT 59.103 37.500 0.00 0.00 46.25 2.45
5362 13620 6.140303 TCAGAATTTTAGCCATCATTGCTC 57.860 37.500 0.00 0.00 40.23 4.26
5367 13625 8.193438 AGAATTTTAGCCATCATTGCTCTAAAC 58.807 33.333 0.00 0.00 40.23 2.01
5395 13653 8.593679 TGGATATTGTTCTCGTATGGATGTAAT 58.406 33.333 0.00 0.00 0.00 1.89
5427 13685 7.517343 AATATGATATCTCTTCGCACATTCG 57.483 36.000 3.98 0.00 0.00 3.34
5460 13718 7.596494 AGTTTAAGATCATGACATGTTTGGTG 58.404 34.615 14.98 0.00 0.00 4.17
5506 13764 7.392393 GCTAATACTCCCTTTGTTCCAAAACTA 59.608 37.037 0.00 0.00 36.30 2.24
5537 13795 7.475771 TGGTTTTAGTTCAAATTTGATGTGC 57.524 32.000 21.10 11.78 37.00 4.57
5547 13805 8.500773 GTTCAAATTTGATGTGCTGAATTCATT 58.499 29.630 21.10 0.00 37.00 2.57
5558 13816 4.095334 TGCTGAATTCATTGAACCGATCAG 59.905 41.667 8.96 19.11 39.77 2.90
5646 13970 4.370364 AGACGTTTTGCAGTTCAATTGT 57.630 36.364 5.13 0.00 34.12 2.71
5656 13980 4.186241 CAGTTCAATTGTGCTGCAAAAC 57.814 40.909 7.53 4.60 40.91 2.43
5717 14042 4.459390 TGTAAAATACAGCACGCCTCTA 57.541 40.909 0.00 0.00 34.06 2.43
5786 14111 9.685005 CTAACTTAATACTCCAATTTCGTTTCG 57.315 33.333 0.00 0.00 0.00 3.46
5787 14112 7.662604 ACTTAATACTCCAATTTCGTTTCGT 57.337 32.000 0.00 0.00 0.00 3.85
5788 14113 8.091385 ACTTAATACTCCAATTTCGTTTCGTT 57.909 30.769 0.00 0.00 0.00 3.85
5789 14114 8.562052 ACTTAATACTCCAATTTCGTTTCGTTT 58.438 29.630 0.00 0.00 0.00 3.60
5790 14115 9.389570 CTTAATACTCCAATTTCGTTTCGTTTT 57.610 29.630 0.00 0.00 0.00 2.43
5791 14116 7.847166 AATACTCCAATTTCGTTTCGTTTTC 57.153 32.000 0.00 0.00 0.00 2.29
5792 14117 4.276460 ACTCCAATTTCGTTTCGTTTTCG 58.724 39.130 0.00 0.00 45.64 3.46
5793 14118 3.619729 TCCAATTTCGTTTCGTTTTCGG 58.380 40.909 0.00 0.00 44.25 4.30
5794 14119 3.065095 TCCAATTTCGTTTCGTTTTCGGT 59.935 39.130 0.00 0.00 44.25 4.69
5795 14120 3.178814 CCAATTTCGTTTCGTTTTCGGTG 59.821 43.478 0.00 0.00 44.25 4.94
5796 14121 3.948196 ATTTCGTTTCGTTTTCGGTGA 57.052 38.095 0.00 0.00 44.25 4.02
5797 14122 3.948196 TTTCGTTTCGTTTTCGGTGAT 57.052 38.095 0.00 0.00 44.25 3.06
5798 14123 3.948196 TTCGTTTCGTTTTCGGTGATT 57.052 38.095 0.00 0.00 44.25 2.57
5799 14124 3.948196 TCGTTTCGTTTTCGGTGATTT 57.052 38.095 0.00 0.00 44.25 2.17
5800 14125 3.609475 TCGTTTCGTTTTCGGTGATTTG 58.391 40.909 0.00 0.00 44.25 2.32
5801 14126 3.063725 TCGTTTCGTTTTCGGTGATTTGT 59.936 39.130 0.00 0.00 44.25 2.83
5802 14127 3.787105 CGTTTCGTTTTCGGTGATTTGTT 59.213 39.130 0.00 0.00 44.25 2.83
5803 14128 4.316102 CGTTTCGTTTTCGGTGATTTGTTG 60.316 41.667 0.00 0.00 44.25 3.33
5804 14129 4.358494 TTCGTTTTCGGTGATTTGTTGT 57.642 36.364 0.00 0.00 44.25 3.32
5805 14130 3.686128 TCGTTTTCGGTGATTTGTTGTG 58.314 40.909 0.00 0.00 44.25 3.33
5806 14131 3.127203 TCGTTTTCGGTGATTTGTTGTGT 59.873 39.130 0.00 0.00 44.25 3.72
5807 14132 3.239483 CGTTTTCGGTGATTTGTTGTGTG 59.761 43.478 0.00 0.00 39.94 3.82
5808 14133 2.483583 TTCGGTGATTTGTTGTGTGC 57.516 45.000 0.00 0.00 0.00 4.57
5809 14134 0.306228 TCGGTGATTTGTTGTGTGCG 59.694 50.000 0.00 0.00 0.00 5.34
5810 14135 0.028770 CGGTGATTTGTTGTGTGCGT 59.971 50.000 0.00 0.00 0.00 5.24
5811 14136 1.476074 GGTGATTTGTTGTGTGCGTG 58.524 50.000 0.00 0.00 0.00 5.34
5812 14137 1.064803 GGTGATTTGTTGTGTGCGTGA 59.935 47.619 0.00 0.00 0.00 4.35
5813 14138 2.287547 GGTGATTTGTTGTGTGCGTGAT 60.288 45.455 0.00 0.00 0.00 3.06
5814 14139 2.973224 GTGATTTGTTGTGTGCGTGATC 59.027 45.455 0.00 0.00 0.00 2.92
5815 14140 2.233355 GATTTGTTGTGTGCGTGATCG 58.767 47.619 0.00 0.00 40.37 3.69
5816 14141 0.306228 TTTGTTGTGTGCGTGATCGG 59.694 50.000 0.00 0.00 37.56 4.18
5817 14142 0.812014 TTGTTGTGTGCGTGATCGGT 60.812 50.000 0.00 0.00 37.56 4.69
5818 14143 0.032267 TGTTGTGTGCGTGATCGGTA 59.968 50.000 0.00 0.00 37.56 4.02
5819 14144 1.141645 GTTGTGTGCGTGATCGGTAA 58.858 50.000 0.00 0.00 37.56 2.85
5820 14145 1.527736 GTTGTGTGCGTGATCGGTAAA 59.472 47.619 0.00 0.00 37.56 2.01
5821 14146 2.087501 TGTGTGCGTGATCGGTAAAT 57.912 45.000 0.00 0.00 37.56 1.40
5822 14147 2.418692 TGTGTGCGTGATCGGTAAATT 58.581 42.857 0.00 0.00 37.56 1.82
5823 14148 2.809119 TGTGTGCGTGATCGGTAAATTT 59.191 40.909 0.00 0.00 37.56 1.82
5824 14149 3.995048 TGTGTGCGTGATCGGTAAATTTA 59.005 39.130 0.00 0.00 37.56 1.40
5825 14150 4.632251 TGTGTGCGTGATCGGTAAATTTAT 59.368 37.500 0.31 0.00 37.56 1.40
5826 14151 5.122554 TGTGTGCGTGATCGGTAAATTTATT 59.877 36.000 0.31 0.00 37.56 1.40
5827 14152 6.025280 GTGTGCGTGATCGGTAAATTTATTT 58.975 36.000 0.31 0.00 37.56 1.40
5828 14153 6.193959 GTGTGCGTGATCGGTAAATTTATTTC 59.806 38.462 0.31 0.00 37.56 2.17
5829 14154 6.092944 TGTGCGTGATCGGTAAATTTATTTCT 59.907 34.615 0.31 0.00 37.56 2.52
5830 14155 6.410914 GTGCGTGATCGGTAAATTTATTTCTG 59.589 38.462 0.31 0.00 37.56 3.02
5831 14156 5.907391 GCGTGATCGGTAAATTTATTTCTGG 59.093 40.000 0.31 0.00 37.56 3.86
5832 14157 5.907391 CGTGATCGGTAAATTTATTTCTGGC 59.093 40.000 0.31 0.00 0.00 4.85
5833 14158 6.238374 CGTGATCGGTAAATTTATTTCTGGCT 60.238 38.462 0.31 0.00 0.00 4.75
5834 14159 7.132863 GTGATCGGTAAATTTATTTCTGGCTC 58.867 38.462 0.31 0.00 0.00 4.70
5835 14160 5.728351 TCGGTAAATTTATTTCTGGCTCG 57.272 39.130 0.31 0.00 0.00 5.03
5836 14161 4.034742 TCGGTAAATTTATTTCTGGCTCGC 59.965 41.667 0.31 0.00 0.00 5.03
5837 14162 4.201871 CGGTAAATTTATTTCTGGCTCGCA 60.202 41.667 0.31 0.00 0.00 5.10
5838 14163 5.505654 CGGTAAATTTATTTCTGGCTCGCAT 60.506 40.000 0.31 0.00 0.00 4.73
5839 14164 6.273071 GGTAAATTTATTTCTGGCTCGCATT 58.727 36.000 0.31 0.00 0.00 3.56
5840 14165 6.198966 GGTAAATTTATTTCTGGCTCGCATTG 59.801 38.462 0.31 0.00 0.00 2.82
5841 14166 3.781079 TTTATTTCTGGCTCGCATTGG 57.219 42.857 0.00 0.00 0.00 3.16
5842 14167 1.024271 TATTTCTGGCTCGCATTGGC 58.976 50.000 0.00 0.00 0.00 4.52
5843 14168 0.682209 ATTTCTGGCTCGCATTGGCT 60.682 50.000 0.00 0.00 38.10 4.75
5844 14169 0.895100 TTTCTGGCTCGCATTGGCTT 60.895 50.000 0.00 0.00 38.10 4.35
5845 14170 1.308069 TTCTGGCTCGCATTGGCTTC 61.308 55.000 0.00 0.00 38.10 3.86
5846 14171 2.751436 TGGCTCGCATTGGCTTCC 60.751 61.111 0.00 0.00 38.10 3.46
5847 14172 2.439156 GGCTCGCATTGGCTTCCT 60.439 61.111 0.00 0.00 38.10 3.36
5848 14173 1.153168 GGCTCGCATTGGCTTCCTA 60.153 57.895 0.00 0.00 38.10 2.94
5849 14174 1.440145 GGCTCGCATTGGCTTCCTAC 61.440 60.000 0.00 0.00 38.10 3.18
5850 14175 0.744414 GCTCGCATTGGCTTCCTACA 60.744 55.000 0.00 0.00 38.10 2.74
5851 14176 1.737838 CTCGCATTGGCTTCCTACAA 58.262 50.000 0.00 0.00 38.10 2.41
5852 14177 1.398390 CTCGCATTGGCTTCCTACAAC 59.602 52.381 0.00 0.00 38.10 3.32
5853 14178 0.096976 CGCATTGGCTTCCTACAACG 59.903 55.000 0.00 0.00 38.10 4.10
5854 14179 1.448985 GCATTGGCTTCCTACAACGA 58.551 50.000 0.00 0.00 36.96 3.85
5855 14180 2.017049 GCATTGGCTTCCTACAACGAT 58.983 47.619 0.00 0.00 36.96 3.73
5856 14181 2.423538 GCATTGGCTTCCTACAACGATT 59.576 45.455 0.00 0.00 36.96 3.34
5857 14182 3.625764 GCATTGGCTTCCTACAACGATTA 59.374 43.478 0.00 0.00 36.96 1.75
5858 14183 4.260784 GCATTGGCTTCCTACAACGATTAG 60.261 45.833 0.00 0.00 36.96 1.73
5859 14184 3.536956 TGGCTTCCTACAACGATTAGG 57.463 47.619 0.00 0.00 37.99 2.69
5860 14185 2.210961 GGCTTCCTACAACGATTAGGC 58.789 52.381 0.00 0.00 36.74 3.93
5861 14186 2.210961 GCTTCCTACAACGATTAGGCC 58.789 52.381 0.00 0.00 36.74 5.19
5862 14187 2.835027 CTTCCTACAACGATTAGGCCC 58.165 52.381 0.00 0.00 36.74 5.80
5863 14188 2.170012 TCCTACAACGATTAGGCCCT 57.830 50.000 0.00 0.00 36.74 5.19
5864 14189 2.037144 TCCTACAACGATTAGGCCCTC 58.963 52.381 0.00 0.00 36.74 4.30
5865 14190 2.040178 CCTACAACGATTAGGCCCTCT 58.960 52.381 0.00 0.00 29.85 3.69
5866 14191 2.434702 CCTACAACGATTAGGCCCTCTT 59.565 50.000 0.00 0.00 29.85 2.85
5867 14192 3.118371 CCTACAACGATTAGGCCCTCTTT 60.118 47.826 0.00 0.00 29.85 2.52
5868 14193 2.711542 ACAACGATTAGGCCCTCTTTG 58.288 47.619 0.00 7.17 0.00 2.77
5869 14194 2.304761 ACAACGATTAGGCCCTCTTTGA 59.695 45.455 18.06 0.00 0.00 2.69
5870 14195 3.054361 ACAACGATTAGGCCCTCTTTGAT 60.054 43.478 18.06 0.00 0.00 2.57
5871 14196 3.933861 ACGATTAGGCCCTCTTTGATT 57.066 42.857 0.00 0.00 0.00 2.57
5872 14197 3.809905 ACGATTAGGCCCTCTTTGATTC 58.190 45.455 0.00 0.00 0.00 2.52
5873 14198 2.802816 CGATTAGGCCCTCTTTGATTCG 59.197 50.000 0.00 0.00 0.00 3.34
5874 14199 2.038387 TTAGGCCCTCTTTGATTCGC 57.962 50.000 0.00 0.00 0.00 4.70
5875 14200 0.908910 TAGGCCCTCTTTGATTCGCA 59.091 50.000 0.00 0.00 0.00 5.10
5876 14201 0.393537 AGGCCCTCTTTGATTCGCAG 60.394 55.000 0.00 0.00 0.00 5.18
5877 14202 1.379642 GGCCCTCTTTGATTCGCAGG 61.380 60.000 0.00 0.00 0.00 4.85
5878 14203 0.392998 GCCCTCTTTGATTCGCAGGA 60.393 55.000 0.00 0.00 0.00 3.86
5879 14204 1.748591 GCCCTCTTTGATTCGCAGGAT 60.749 52.381 0.00 0.00 0.00 3.24
5880 14205 2.648059 CCCTCTTTGATTCGCAGGATT 58.352 47.619 0.00 0.00 0.00 3.01
5881 14206 3.019564 CCCTCTTTGATTCGCAGGATTT 58.980 45.455 0.00 0.00 0.00 2.17
5882 14207 3.445096 CCCTCTTTGATTCGCAGGATTTT 59.555 43.478 0.00 0.00 0.00 1.82
5883 14208 4.439289 CCCTCTTTGATTCGCAGGATTTTC 60.439 45.833 0.00 0.00 0.00 2.29
5884 14209 4.156556 CCTCTTTGATTCGCAGGATTTTCA 59.843 41.667 0.00 0.00 0.00 2.69
5885 14210 5.335897 CCTCTTTGATTCGCAGGATTTTCAA 60.336 40.000 0.00 0.00 0.00 2.69
5886 14211 6.083098 TCTTTGATTCGCAGGATTTTCAAA 57.917 33.333 0.00 0.00 0.00 2.69
5887 14212 6.511416 TCTTTGATTCGCAGGATTTTCAAAA 58.489 32.000 0.00 0.00 0.00 2.44
5888 14213 6.420604 TCTTTGATTCGCAGGATTTTCAAAAC 59.579 34.615 0.00 0.00 0.00 2.43
5889 14214 4.225984 TGATTCGCAGGATTTTCAAAACG 58.774 39.130 0.00 0.00 0.00 3.60
5890 14215 3.701532 TTCGCAGGATTTTCAAAACGT 57.298 38.095 0.00 0.00 0.00 3.99
5891 14216 4.815040 TTCGCAGGATTTTCAAAACGTA 57.185 36.364 0.00 0.00 0.00 3.57
5892 14217 4.398549 TCGCAGGATTTTCAAAACGTAG 57.601 40.909 0.00 0.00 0.00 3.51
5893 14218 3.187637 TCGCAGGATTTTCAAAACGTAGG 59.812 43.478 0.00 0.00 0.00 3.18
5894 14219 3.187637 CGCAGGATTTTCAAAACGTAGGA 59.812 43.478 0.00 0.00 0.00 2.94
5895 14220 4.319911 CGCAGGATTTTCAAAACGTAGGAA 60.320 41.667 0.00 0.00 0.00 3.36
5896 14221 5.619086 CGCAGGATTTTCAAAACGTAGGAAT 60.619 40.000 0.00 0.00 0.00 3.01
5897 14222 6.402766 CGCAGGATTTTCAAAACGTAGGAATA 60.403 38.462 0.00 0.00 0.00 1.75
5898 14223 6.967199 GCAGGATTTTCAAAACGTAGGAATAG 59.033 38.462 0.00 0.00 0.00 1.73
5899 14224 7.472543 CAGGATTTTCAAAACGTAGGAATAGG 58.527 38.462 0.00 0.00 0.00 2.57
5900 14225 7.335924 CAGGATTTTCAAAACGTAGGAATAGGA 59.664 37.037 0.00 0.00 0.00 2.94
5901 14226 7.886446 AGGATTTTCAAAACGTAGGAATAGGAA 59.114 33.333 0.00 0.00 0.00 3.36
5902 14227 8.517056 GGATTTTCAAAACGTAGGAATAGGAAA 58.483 33.333 0.00 0.00 0.00 3.13
5903 14228 9.902196 GATTTTCAAAACGTAGGAATAGGAAAA 57.098 29.630 0.00 0.00 36.52 2.29
5904 14229 9.908152 ATTTTCAAAACGTAGGAATAGGAAAAG 57.092 29.630 0.00 0.00 35.84 2.27
5905 14230 8.454570 TTTCAAAACGTAGGAATAGGAAAAGT 57.545 30.769 0.00 0.00 0.00 2.66
5906 14231 9.558396 TTTCAAAACGTAGGAATAGGAAAAGTA 57.442 29.630 0.00 0.00 0.00 2.24
5907 14232 9.729281 TTCAAAACGTAGGAATAGGAAAAGTAT 57.271 29.630 0.00 0.00 0.00 2.12
5910 14235 9.828039 AAAACGTAGGAATAGGAAAAGTATAGG 57.172 33.333 0.00 0.00 0.00 2.57
5911 14236 7.536159 ACGTAGGAATAGGAAAAGTATAGGG 57.464 40.000 0.00 0.00 0.00 3.53
5912 14237 7.071917 ACGTAGGAATAGGAAAAGTATAGGGT 58.928 38.462 0.00 0.00 0.00 4.34
5913 14238 7.566509 ACGTAGGAATAGGAAAAGTATAGGGTT 59.433 37.037 0.00 0.00 0.00 4.11
5914 14239 7.871463 CGTAGGAATAGGAAAAGTATAGGGTTG 59.129 40.741 0.00 0.00 0.00 3.77
5915 14240 7.150447 AGGAATAGGAAAAGTATAGGGTTGG 57.850 40.000 0.00 0.00 0.00 3.77
5916 14241 6.912561 AGGAATAGGAAAAGTATAGGGTTGGA 59.087 38.462 0.00 0.00 0.00 3.53
5917 14242 7.072581 AGGAATAGGAAAAGTATAGGGTTGGAG 59.927 40.741 0.00 0.00 0.00 3.86
5918 14243 7.147355 GGAATAGGAAAAGTATAGGGTTGGAGT 60.147 40.741 0.00 0.00 0.00 3.85
5919 14244 5.437191 AGGAAAAGTATAGGGTTGGAGTG 57.563 43.478 0.00 0.00 0.00 3.51
5920 14245 4.227527 AGGAAAAGTATAGGGTTGGAGTGG 59.772 45.833 0.00 0.00 0.00 4.00
5921 14246 3.646736 AAAGTATAGGGTTGGAGTGGC 57.353 47.619 0.00 0.00 0.00 5.01
5922 14247 2.263895 AGTATAGGGTTGGAGTGGCA 57.736 50.000 0.00 0.00 0.00 4.92
5923 14248 2.776665 AGTATAGGGTTGGAGTGGCAT 58.223 47.619 0.00 0.00 0.00 4.40
5924 14249 2.439507 AGTATAGGGTTGGAGTGGCATG 59.560 50.000 0.00 0.00 0.00 4.06
5925 14250 0.106519 ATAGGGTTGGAGTGGCATGC 60.107 55.000 9.90 9.90 0.00 4.06
5926 14251 1.496444 TAGGGTTGGAGTGGCATGCA 61.496 55.000 21.36 2.54 0.00 3.96
5927 14252 2.639327 GGGTTGGAGTGGCATGCAC 61.639 63.158 21.36 15.34 0.00 4.57
5928 14253 1.902918 GGTTGGAGTGGCATGCACA 60.903 57.895 21.36 12.37 0.00 4.57
5929 14254 1.286880 GTTGGAGTGGCATGCACAC 59.713 57.895 23.70 23.70 39.10 3.82
5930 14255 1.152798 TTGGAGTGGCATGCACACA 60.153 52.632 29.08 19.93 41.21 3.72
5931 14256 0.540133 TTGGAGTGGCATGCACACAT 60.540 50.000 29.08 19.13 41.21 3.21
5943 14268 2.989909 TGCACACATGAATCCTACAGG 58.010 47.619 0.00 0.00 0.00 4.00
5944 14269 3.200605 ATGCACACATGAATCCTACAGGA 59.799 43.478 0.00 0.00 41.30 3.86
5945 14270 4.141321 ATGCACACATGAATCCTACAGGAT 60.141 41.667 4.86 4.86 45.44 3.24
5956 14281 3.928754 TCCTACAGGATTAGCATGGAGT 58.071 45.455 0.00 0.00 37.54 3.85
5957 14282 3.643320 TCCTACAGGATTAGCATGGAGTG 59.357 47.826 0.00 0.00 37.54 3.51
5958 14283 3.389329 CCTACAGGATTAGCATGGAGTGT 59.611 47.826 0.00 0.00 37.54 3.55
5959 14284 4.141620 CCTACAGGATTAGCATGGAGTGTT 60.142 45.833 0.00 0.00 37.54 3.32
5960 14285 4.307032 ACAGGATTAGCATGGAGTGTTT 57.693 40.909 0.00 0.00 31.20 2.83
5961 14286 4.012374 ACAGGATTAGCATGGAGTGTTTG 58.988 43.478 0.00 0.00 31.20 2.93
5962 14287 4.263462 ACAGGATTAGCATGGAGTGTTTGA 60.263 41.667 0.00 0.00 31.20 2.69
5963 14288 4.885907 CAGGATTAGCATGGAGTGTTTGAT 59.114 41.667 0.00 0.00 0.00 2.57
5964 14289 4.885907 AGGATTAGCATGGAGTGTTTGATG 59.114 41.667 0.00 0.00 0.00 3.07
5965 14290 4.037208 GGATTAGCATGGAGTGTTTGATGG 59.963 45.833 0.00 0.00 0.00 3.51
5966 14291 1.180029 AGCATGGAGTGTTTGATGGC 58.820 50.000 0.00 0.00 0.00 4.40
5967 14292 0.889994 GCATGGAGTGTTTGATGGCA 59.110 50.000 0.00 0.00 0.00 4.92
5968 14293 1.403249 GCATGGAGTGTTTGATGGCAC 60.403 52.381 0.00 0.00 35.98 5.01
5982 14307 2.600470 TGGCACAGGAAAAGCAAAAG 57.400 45.000 0.00 0.00 0.00 2.27
5983 14308 2.106566 TGGCACAGGAAAAGCAAAAGA 58.893 42.857 0.00 0.00 0.00 2.52
5984 14309 2.499289 TGGCACAGGAAAAGCAAAAGAA 59.501 40.909 0.00 0.00 0.00 2.52
5985 14310 3.134442 TGGCACAGGAAAAGCAAAAGAAT 59.866 39.130 0.00 0.00 0.00 2.40
5986 14311 4.129380 GGCACAGGAAAAGCAAAAGAATT 58.871 39.130 0.00 0.00 0.00 2.17
5987 14312 4.024641 GGCACAGGAAAAGCAAAAGAATTG 60.025 41.667 0.00 0.00 0.00 2.32
5988 14313 4.571984 GCACAGGAAAAGCAAAAGAATTGT 59.428 37.500 0.00 0.00 0.00 2.71
5989 14314 5.752955 GCACAGGAAAAGCAAAAGAATTGTA 59.247 36.000 0.00 0.00 0.00 2.41
5990 14315 6.257630 GCACAGGAAAAGCAAAAGAATTGTAA 59.742 34.615 0.00 0.00 0.00 2.41
5991 14316 7.201600 GCACAGGAAAAGCAAAAGAATTGTAAA 60.202 33.333 0.00 0.00 0.00 2.01
5992 14317 8.663911 CACAGGAAAAGCAAAAGAATTGTAAAA 58.336 29.630 0.00 0.00 0.00 1.52
5993 14318 9.225436 ACAGGAAAAGCAAAAGAATTGTAAAAA 57.775 25.926 0.00 0.00 0.00 1.94
5994 14319 9.706846 CAGGAAAAGCAAAAGAATTGTAAAAAG 57.293 29.630 0.00 0.00 0.00 2.27
5995 14320 9.665719 AGGAAAAGCAAAAGAATTGTAAAAAGA 57.334 25.926 0.00 0.00 0.00 2.52
5996 14321 9.920826 GGAAAAGCAAAAGAATTGTAAAAAGAG 57.079 29.630 0.00 0.00 0.00 2.85
5997 14322 9.920826 GAAAAGCAAAAGAATTGTAAAAAGAGG 57.079 29.630 0.00 0.00 0.00 3.69
5998 14323 9.448438 AAAAGCAAAAGAATTGTAAAAAGAGGT 57.552 25.926 0.00 0.00 0.00 3.85
5999 14324 9.448438 AAAGCAAAAGAATTGTAAAAAGAGGTT 57.552 25.926 0.00 0.00 0.00 3.50
6000 14325 8.424274 AGCAAAAGAATTGTAAAAAGAGGTTG 57.576 30.769 0.00 0.00 0.00 3.77
6001 14326 7.495606 AGCAAAAGAATTGTAAAAAGAGGTTGG 59.504 33.333 0.00 0.00 0.00 3.77
6002 14327 7.494298 GCAAAAGAATTGTAAAAAGAGGTTGGA 59.506 33.333 0.00 0.00 0.00 3.53
6003 14328 9.034544 CAAAAGAATTGTAAAAAGAGGTTGGAG 57.965 33.333 0.00 0.00 0.00 3.86
6004 14329 7.898014 AAGAATTGTAAAAAGAGGTTGGAGT 57.102 32.000 0.00 0.00 0.00 3.85
6005 14330 7.277174 AGAATTGTAAAAAGAGGTTGGAGTG 57.723 36.000 0.00 0.00 0.00 3.51
6006 14331 6.265422 AGAATTGTAAAAAGAGGTTGGAGTGG 59.735 38.462 0.00 0.00 0.00 4.00
6007 14332 4.781775 TGTAAAAAGAGGTTGGAGTGGA 57.218 40.909 0.00 0.00 0.00 4.02
6008 14333 5.319043 TGTAAAAAGAGGTTGGAGTGGAT 57.681 39.130 0.00 0.00 0.00 3.41
6009 14334 5.070001 TGTAAAAAGAGGTTGGAGTGGATG 58.930 41.667 0.00 0.00 0.00 3.51
6010 14335 3.884037 AAAAGAGGTTGGAGTGGATGT 57.116 42.857 0.00 0.00 0.00 3.06
6011 14336 3.884037 AAAGAGGTTGGAGTGGATGTT 57.116 42.857 0.00 0.00 0.00 2.71
6012 14337 4.993705 AAAGAGGTTGGAGTGGATGTTA 57.006 40.909 0.00 0.00 0.00 2.41
6013 14338 4.559862 AAGAGGTTGGAGTGGATGTTAG 57.440 45.455 0.00 0.00 0.00 2.34
6014 14339 3.791320 AGAGGTTGGAGTGGATGTTAGA 58.209 45.455 0.00 0.00 0.00 2.10
6015 14340 4.366267 AGAGGTTGGAGTGGATGTTAGAT 58.634 43.478 0.00 0.00 0.00 1.98
6016 14341 4.785376 AGAGGTTGGAGTGGATGTTAGATT 59.215 41.667 0.00 0.00 0.00 2.40
6017 14342 5.251700 AGAGGTTGGAGTGGATGTTAGATTT 59.748 40.000 0.00 0.00 0.00 2.17
6018 14343 5.501156 AGGTTGGAGTGGATGTTAGATTTC 58.499 41.667 0.00 0.00 0.00 2.17
6019 14344 4.640647 GGTTGGAGTGGATGTTAGATTTCC 59.359 45.833 0.00 0.00 0.00 3.13
6020 14345 5.501156 GTTGGAGTGGATGTTAGATTTCCT 58.499 41.667 0.00 0.00 0.00 3.36
6021 14346 6.352737 GGTTGGAGTGGATGTTAGATTTCCTA 60.353 42.308 0.00 0.00 0.00 2.94
6022 14347 7.283329 GTTGGAGTGGATGTTAGATTTCCTAT 58.717 38.462 0.00 0.00 0.00 2.57
6023 14348 6.830912 TGGAGTGGATGTTAGATTTCCTATG 58.169 40.000 0.00 0.00 0.00 2.23
6024 14349 6.615316 TGGAGTGGATGTTAGATTTCCTATGA 59.385 38.462 0.00 0.00 0.00 2.15
6025 14350 7.127186 TGGAGTGGATGTTAGATTTCCTATGAA 59.873 37.037 0.00 0.00 0.00 2.57
6026 14351 7.993183 GGAGTGGATGTTAGATTTCCTATGAAA 59.007 37.037 0.00 0.00 44.22 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 87 1.301244 CAGCAGCCTTGTCGACAGT 60.301 57.895 19.11 2.15 0.00 3.55
94 96 0.324091 CTTTCCCATCCAGCAGCCTT 60.324 55.000 0.00 0.00 0.00 4.35
180 182 1.838077 AGTAATTTGGGACGGAGGGAG 59.162 52.381 0.00 0.00 0.00 4.30
181 183 1.835531 GAGTAATTTGGGACGGAGGGA 59.164 52.381 0.00 0.00 0.00 4.20
182 184 1.472728 CGAGTAATTTGGGACGGAGGG 60.473 57.143 0.00 0.00 0.00 4.30
183 185 1.206371 ACGAGTAATTTGGGACGGAGG 59.794 52.381 0.00 0.00 0.00 4.30
184 186 2.094390 TGACGAGTAATTTGGGACGGAG 60.094 50.000 0.00 0.00 0.00 4.63
185 187 1.894466 TGACGAGTAATTTGGGACGGA 59.106 47.619 0.00 0.00 0.00 4.69
186 188 1.997606 GTGACGAGTAATTTGGGACGG 59.002 52.381 0.00 0.00 0.00 4.79
187 189 2.666508 CTGTGACGAGTAATTTGGGACG 59.333 50.000 0.00 0.00 0.00 4.79
188 190 3.921677 TCTGTGACGAGTAATTTGGGAC 58.078 45.455 0.00 0.00 0.00 4.46
189 191 4.610605 TTCTGTGACGAGTAATTTGGGA 57.389 40.909 0.00 0.00 0.00 4.37
190 192 5.391950 CCATTTCTGTGACGAGTAATTTGGG 60.392 44.000 0.00 0.00 0.00 4.12
191 193 5.411361 TCCATTTCTGTGACGAGTAATTTGG 59.589 40.000 0.00 0.00 0.00 3.28
192 194 6.480524 TCCATTTCTGTGACGAGTAATTTG 57.519 37.500 0.00 0.00 0.00 2.32
193 195 6.655003 ACATCCATTTCTGTGACGAGTAATTT 59.345 34.615 0.00 0.00 0.00 1.82
194 196 6.173339 ACATCCATTTCTGTGACGAGTAATT 58.827 36.000 0.00 0.00 0.00 1.40
195 197 5.734720 ACATCCATTTCTGTGACGAGTAAT 58.265 37.500 0.00 0.00 0.00 1.89
196 198 5.147330 ACATCCATTTCTGTGACGAGTAA 57.853 39.130 0.00 0.00 0.00 2.24
197 199 4.801330 ACATCCATTTCTGTGACGAGTA 57.199 40.909 0.00 0.00 0.00 2.59
198 200 3.685139 ACATCCATTTCTGTGACGAGT 57.315 42.857 0.00 0.00 0.00 4.18
199 201 5.595885 AGATACATCCATTTCTGTGACGAG 58.404 41.667 0.00 0.00 0.00 4.18
200 202 5.598416 AGATACATCCATTTCTGTGACGA 57.402 39.130 0.00 0.00 0.00 4.20
201 203 6.739112 TCTAGATACATCCATTTCTGTGACG 58.261 40.000 0.00 0.00 0.00 4.35
202 204 8.200792 AGTTCTAGATACATCCATTTCTGTGAC 58.799 37.037 0.00 0.00 0.00 3.67
203 205 8.311395 AGTTCTAGATACATCCATTTCTGTGA 57.689 34.615 0.00 0.00 0.00 3.58
232 234 8.409371 CGCAAGTATGGATGTATCTAGATGTAT 58.591 37.037 15.79 9.11 0.00 2.29
233 235 7.610305 TCGCAAGTATGGATGTATCTAGATGTA 59.390 37.037 15.79 4.44 39.48 2.29
234 236 6.434340 TCGCAAGTATGGATGTATCTAGATGT 59.566 38.462 15.79 1.25 39.48 3.06
235 237 6.856895 TCGCAAGTATGGATGTATCTAGATG 58.143 40.000 15.79 0.00 39.48 2.90
236 238 7.652524 ATCGCAAGTATGGATGTATCTAGAT 57.347 36.000 10.73 10.73 39.48 1.98
237 239 8.575649 TTATCGCAAGTATGGATGTATCTAGA 57.424 34.615 0.00 0.00 39.48 2.43
238 240 8.462811 ACTTATCGCAAGTATGGATGTATCTAG 58.537 37.037 0.92 0.00 39.48 2.43
239 241 8.349568 ACTTATCGCAAGTATGGATGTATCTA 57.650 34.615 0.92 0.00 39.48 1.98
240 242 7.233389 ACTTATCGCAAGTATGGATGTATCT 57.767 36.000 0.92 0.00 39.48 1.98
241 243 8.981724 TTACTTATCGCAAGTATGGATGTATC 57.018 34.615 9.40 0.00 33.27 2.24
242 244 9.944376 AATTACTTATCGCAAGTATGGATGTAT 57.056 29.630 9.40 0.00 33.27 2.29
243 245 9.772973 AAATTACTTATCGCAAGTATGGATGTA 57.227 29.630 9.40 0.00 33.27 2.29
244 246 8.559536 CAAATTACTTATCGCAAGTATGGATGT 58.440 33.333 9.40 0.00 33.27 3.06
245 247 8.773645 TCAAATTACTTATCGCAAGTATGGATG 58.226 33.333 9.40 7.58 33.27 3.51
246 248 8.902540 TCAAATTACTTATCGCAAGTATGGAT 57.097 30.769 9.40 0.63 33.27 3.41
247 249 8.725405 TTCAAATTACTTATCGCAAGTATGGA 57.275 30.769 9.40 0.27 33.27 3.41
248 250 9.221775 GTTTCAAATTACTTATCGCAAGTATGG 57.778 33.333 9.40 2.69 33.27 2.74
249 251 8.933955 CGTTTCAAATTACTTATCGCAAGTATG 58.066 33.333 9.40 6.46 33.27 2.39
250 252 8.875803 TCGTTTCAAATTACTTATCGCAAGTAT 58.124 29.630 9.40 0.00 33.27 2.12
251 253 8.242085 TCGTTTCAAATTACTTATCGCAAGTA 57.758 30.769 5.62 5.62 39.48 2.24
252 254 7.124347 TCGTTTCAAATTACTTATCGCAAGT 57.876 32.000 7.31 7.31 39.48 3.16
253 255 7.216317 CCTTCGTTTCAAATTACTTATCGCAAG 59.784 37.037 0.00 0.00 0.00 4.01
254 256 7.018826 CCTTCGTTTCAAATTACTTATCGCAA 58.981 34.615 0.00 0.00 0.00 4.85
255 257 6.402766 CCCTTCGTTTCAAATTACTTATCGCA 60.403 38.462 0.00 0.00 0.00 5.10
256 258 5.963586 CCCTTCGTTTCAAATTACTTATCGC 59.036 40.000 0.00 0.00 0.00 4.58
257 259 7.064253 ACTCCCTTCGTTTCAAATTACTTATCG 59.936 37.037 0.00 0.00 0.00 2.92
258 260 8.265165 ACTCCCTTCGTTTCAAATTACTTATC 57.735 34.615 0.00 0.00 0.00 1.75
259 261 9.729281 TTACTCCCTTCGTTTCAAATTACTTAT 57.271 29.630 0.00 0.00 0.00 1.73
260 262 9.558396 TTTACTCCCTTCGTTTCAAATTACTTA 57.442 29.630 0.00 0.00 0.00 2.24
261 263 8.454570 TTTACTCCCTTCGTTTCAAATTACTT 57.545 30.769 0.00 0.00 0.00 2.24
262 264 8.631480 ATTTACTCCCTTCGTTTCAAATTACT 57.369 30.769 0.00 0.00 0.00 2.24
263 265 7.691050 CGATTTACTCCCTTCGTTTCAAATTAC 59.309 37.037 0.00 0.00 0.00 1.89
264 266 7.148373 CCGATTTACTCCCTTCGTTTCAAATTA 60.148 37.037 0.00 0.00 0.00 1.40
265 267 6.349033 CCGATTTACTCCCTTCGTTTCAAATT 60.349 38.462 0.00 0.00 0.00 1.82
266 268 5.123344 CCGATTTACTCCCTTCGTTTCAAAT 59.877 40.000 0.00 0.00 0.00 2.32
267 269 4.453136 CCGATTTACTCCCTTCGTTTCAAA 59.547 41.667 0.00 0.00 0.00 2.69
268 270 3.998341 CCGATTTACTCCCTTCGTTTCAA 59.002 43.478 0.00 0.00 0.00 2.69
269 271 3.258872 TCCGATTTACTCCCTTCGTTTCA 59.741 43.478 0.00 0.00 0.00 2.69
270 272 3.853475 TCCGATTTACTCCCTTCGTTTC 58.147 45.455 0.00 0.00 0.00 2.78
271 273 3.967332 TCCGATTTACTCCCTTCGTTT 57.033 42.857 0.00 0.00 0.00 3.60
272 274 3.967332 TTCCGATTTACTCCCTTCGTT 57.033 42.857 0.00 0.00 0.00 3.85
273 275 3.967332 TTTCCGATTTACTCCCTTCGT 57.033 42.857 0.00 0.00 0.00 3.85
274 276 4.439057 TCATTTCCGATTTACTCCCTTCG 58.561 43.478 0.00 0.00 0.00 3.79
275 277 4.816925 CCTCATTTCCGATTTACTCCCTTC 59.183 45.833 0.00 0.00 0.00 3.46
276 278 4.227527 ACCTCATTTCCGATTTACTCCCTT 59.772 41.667 0.00 0.00 0.00 3.95
277 279 3.780850 ACCTCATTTCCGATTTACTCCCT 59.219 43.478 0.00 0.00 0.00 4.20
278 280 4.152284 ACCTCATTTCCGATTTACTCCC 57.848 45.455 0.00 0.00 0.00 4.30
279 281 5.915175 ACTACCTCATTTCCGATTTACTCC 58.085 41.667 0.00 0.00 0.00 3.85
280 282 8.358148 TCATACTACCTCATTTCCGATTTACTC 58.642 37.037 0.00 0.00 0.00 2.59
281 283 8.246430 TCATACTACCTCATTTCCGATTTACT 57.754 34.615 0.00 0.00 0.00 2.24
282 284 8.926710 CATCATACTACCTCATTTCCGATTTAC 58.073 37.037 0.00 0.00 0.00 2.01
283 285 8.094548 CCATCATACTACCTCATTTCCGATTTA 58.905 37.037 0.00 0.00 0.00 1.40
284 286 6.936900 CCATCATACTACCTCATTTCCGATTT 59.063 38.462 0.00 0.00 0.00 2.17
462 465 3.040763 GATGAGAGGCGGCGATGC 61.041 66.667 12.98 0.00 0.00 3.91
465 468 3.889044 GACGATGAGAGGCGGCGA 61.889 66.667 12.98 0.00 0.00 5.54
923 1985 1.750780 GCAGGCAAGGGCTAAGGTC 60.751 63.158 0.00 0.00 40.87 3.85
937 1999 2.892425 GCGACCGGATCTTGCAGG 60.892 66.667 9.46 0.00 0.00 4.85
1096 2170 6.018262 GCAATAAATTAGATGTCTACGCACCA 60.018 38.462 0.00 0.00 0.00 4.17
1244 2318 0.391263 GAAACCTGTACGCTGGGAGG 60.391 60.000 0.00 0.00 37.95 4.30
1502 2591 4.552166 AAACTCACCACTTCATTGAACG 57.448 40.909 0.00 0.00 0.00 3.95
1633 4471 2.755103 GGTTTGGATGATGGAAGTGGAC 59.245 50.000 0.00 0.00 0.00 4.02
1666 4504 2.302733 GTTGATGGTTCCCTTGCCATTT 59.697 45.455 0.00 0.00 44.73 2.32
1667 4505 1.901833 GTTGATGGTTCCCTTGCCATT 59.098 47.619 0.00 0.00 44.73 3.16
1730 4571 3.568538 GCACTTGCTCTTTAACACCATG 58.431 45.455 0.00 0.00 38.21 3.66
1909 4750 7.609760 AGATAGTCGAGACAGCTATGAATAG 57.390 40.000 5.99 0.00 0.00 1.73
2034 4884 2.917971 TCGTTTTCAAAAAGCAACACCG 59.082 40.909 0.00 0.00 0.00 4.94
2092 4942 3.007182 CAGGCCAAGTTCATGTTGGATTT 59.993 43.478 15.79 0.08 46.53 2.17
2120 4970 3.804873 GCAGAGAATCGTAAGTTGGGATC 59.195 47.826 0.00 0.00 42.67 3.36
2132 4982 2.687842 GCTTCCCAGCAGAGAATCG 58.312 57.895 0.00 0.00 46.49 3.34
2145 4995 1.599240 GGATGGCGATGGAGCTTCC 60.599 63.158 0.00 0.00 36.96 3.46
2146 4996 0.464373 TTGGATGGCGATGGAGCTTC 60.464 55.000 0.00 0.00 37.29 3.86
2147 4997 0.749454 GTTGGATGGCGATGGAGCTT 60.749 55.000 0.00 0.00 37.29 3.74
2260 5111 5.904362 AGAAAAATCTTGAGTACCATGGC 57.096 39.130 13.04 0.00 0.00 4.40
2374 5860 1.542108 CCCATTCTCTCCAATCTCGCC 60.542 57.143 0.00 0.00 0.00 5.54
2423 5910 1.338020 ACTCTGGGCAAAAAGAAAGCG 59.662 47.619 0.00 0.00 0.00 4.68
2450 5937 4.521130 ATGATAGCACATACACGGGTAG 57.479 45.455 2.90 0.00 31.88 3.18
2490 5981 1.423921 GGAGAAAACAGGGTTCCTCCA 59.576 52.381 17.93 0.00 38.11 3.86
2591 6082 3.626028 ACAAAAATCTCGCCACACTTC 57.374 42.857 0.00 0.00 0.00 3.01
2618 6109 6.963805 GTGTTCATTTCTCTGCATTAGCTTAC 59.036 38.462 0.00 0.00 42.74 2.34
2629 6120 2.486982 CAGGCTGGTGTTCATTTCTCTG 59.513 50.000 6.61 0.00 0.00 3.35
2632 6123 2.957402 TCAGGCTGGTGTTCATTTCT 57.043 45.000 15.73 0.00 0.00 2.52
2637 6128 0.397941 CTCCTTCAGGCTGGTGTTCA 59.602 55.000 15.73 0.00 34.44 3.18
2693 6184 0.831711 AGGGCATGTTTGGTTGGGAC 60.832 55.000 0.00 0.00 0.00 4.46
3179 8207 4.259810 CGCATGGACTTATAGTGTGAAACG 60.260 45.833 0.00 0.00 42.39 3.60
3180 8208 4.494199 GCGCATGGACTTATAGTGTGAAAC 60.494 45.833 0.30 0.00 37.35 2.78
3209 8237 2.715749 TGACTCCTTGGCATGTATGG 57.284 50.000 0.00 0.00 0.00 2.74
3226 8342 8.107729 TCTCTGTTAGACTTAGTGTATCCTTGA 58.892 37.037 0.00 0.00 0.00 3.02
3303 8431 5.220989 CCACTGATCTGCATCGAAAATCATT 60.221 40.000 0.00 0.00 0.00 2.57
3372 8500 6.770303 TGACAAGTGAAGTCCATGTGAATTAA 59.230 34.615 0.00 0.00 35.15 1.40
3559 8696 1.135972 GCTCGAAAGAAATCAAGCGCA 60.136 47.619 11.47 0.00 41.32 6.09
3560 8697 1.135972 TGCTCGAAAGAAATCAAGCGC 60.136 47.619 0.00 0.00 41.32 5.92
3590 8727 5.009631 TCCTTGGTACCATTGAAATGAGTG 58.990 41.667 17.17 2.26 38.70 3.51
3591 8728 5.010282 GTCCTTGGTACCATTGAAATGAGT 58.990 41.667 17.17 4.04 38.70 3.41
3624 8761 4.761975 AGTGTTGAAACTTACTCGGTTCA 58.238 39.130 0.00 0.00 0.00 3.18
3633 8770 4.600111 ACCCCCTCATAGTGTTGAAACTTA 59.400 41.667 0.00 0.00 0.00 2.24
3947 9119 7.900782 ATGCATGAGATTCCAAAAGAAAAAG 57.099 32.000 0.00 0.00 38.21 2.27
4029 9350 3.937706 GTGAAGCACACATAGAGCATCTT 59.062 43.478 8.75 0.00 46.29 2.40
4249 11488 5.539955 GCAAATCCATCCCTACATACCAAAT 59.460 40.000 0.00 0.00 0.00 2.32
4512 11754 7.640597 AACAAACTAGTCTAAAAGCAAGGTT 57.359 32.000 0.00 0.00 0.00 3.50
4786 12511 4.169856 ACATCCTCCTCCTCTCTACAATCT 59.830 45.833 0.00 0.00 0.00 2.40
4872 12880 7.328277 ACTAAAGTATCTGCACACACAAAAA 57.672 32.000 0.00 0.00 0.00 1.94
4873 12881 6.935741 ACTAAAGTATCTGCACACACAAAA 57.064 33.333 0.00 0.00 0.00 2.44
4875 12883 7.360861 GCATAACTAAAGTATCTGCACACACAA 60.361 37.037 6.60 0.00 31.41 3.33
4877 12885 6.092122 TGCATAACTAAAGTATCTGCACACAC 59.908 38.462 9.01 0.00 34.29 3.82
4879 12887 6.662414 TGCATAACTAAAGTATCTGCACAC 57.338 37.500 9.01 0.00 34.29 3.82
5040 13048 7.148440 CCTCATCTTCACTTTCTTCATCACTTC 60.148 40.741 0.00 0.00 0.00 3.01
5090 13098 8.417106 CCTCTAGCACATCAGATTAAGACTTAA 58.583 37.037 10.02 10.02 0.00 1.85
5092 13100 6.183360 CCCTCTAGCACATCAGATTAAGACTT 60.183 42.308 0.00 0.00 0.00 3.01
5093 13101 5.304101 CCCTCTAGCACATCAGATTAAGACT 59.696 44.000 0.00 0.00 0.00 3.24
5094 13102 5.510520 CCCCTCTAGCACATCAGATTAAGAC 60.511 48.000 0.00 0.00 0.00 3.01
5096 13104 4.346418 ACCCCTCTAGCACATCAGATTAAG 59.654 45.833 0.00 0.00 0.00 1.85
5097 13105 4.298626 ACCCCTCTAGCACATCAGATTAA 58.701 43.478 0.00 0.00 0.00 1.40
5099 13107 2.769209 ACCCCTCTAGCACATCAGATT 58.231 47.619 0.00 0.00 0.00 2.40
5100 13108 2.485966 ACCCCTCTAGCACATCAGAT 57.514 50.000 0.00 0.00 0.00 2.90
5101 13109 2.254152 AACCCCTCTAGCACATCAGA 57.746 50.000 0.00 0.00 0.00 3.27
5103 13111 3.031736 GACTAACCCCTCTAGCACATCA 58.968 50.000 0.00 0.00 0.00 3.07
5104 13112 3.301274 AGACTAACCCCTCTAGCACATC 58.699 50.000 0.00 0.00 0.00 3.06
5105 13113 3.406512 AGACTAACCCCTCTAGCACAT 57.593 47.619 0.00 0.00 0.00 3.21
5106 13114 2.921834 AGACTAACCCCTCTAGCACA 57.078 50.000 0.00 0.00 0.00 4.57
5109 13117 5.834204 TCAGATTAAGACTAACCCCTCTAGC 59.166 44.000 0.00 0.00 0.00 3.42
5110 13118 7.507616 ACATCAGATTAAGACTAACCCCTCTAG 59.492 40.741 0.00 0.00 0.00 2.43
5111 13119 7.287927 CACATCAGATTAAGACTAACCCCTCTA 59.712 40.741 0.00 0.00 0.00 2.43
5112 13120 6.098982 CACATCAGATTAAGACTAACCCCTCT 59.901 42.308 0.00 0.00 0.00 3.69
5113 13121 6.284459 CACATCAGATTAAGACTAACCCCTC 58.716 44.000 0.00 0.00 0.00 4.30
5114 13122 5.396884 GCACATCAGATTAAGACTAACCCCT 60.397 44.000 0.00 0.00 0.00 4.79
5115 13123 4.816925 GCACATCAGATTAAGACTAACCCC 59.183 45.833 0.00 0.00 0.00 4.95
5116 13124 5.675538 AGCACATCAGATTAAGACTAACCC 58.324 41.667 0.00 0.00 0.00 4.11
5117 13125 7.436673 CACTAGCACATCAGATTAAGACTAACC 59.563 40.741 0.00 0.00 0.00 2.85
5166 13174 1.319614 ACCACAAACCAGCACCACAC 61.320 55.000 0.00 0.00 0.00 3.82
5167 13175 1.000270 ACCACAAACCAGCACCACA 60.000 52.632 0.00 0.00 0.00 4.17
5176 13184 2.723124 AATTGATGCGACCACAAACC 57.277 45.000 0.00 0.00 0.00 3.27
5180 13188 3.724508 AAACAAATTGATGCGACCACA 57.275 38.095 0.00 0.00 0.00 4.17
5201 13209 7.227049 ACTGAGTTCAAAGTCAAAGGAAAAA 57.773 32.000 2.18 0.00 37.87 1.94
5202 13210 6.834168 ACTGAGTTCAAAGTCAAAGGAAAA 57.166 33.333 2.18 0.00 37.87 2.29
5203 13211 6.659242 AGAACTGAGTTCAAAGTCAAAGGAAA 59.341 34.615 25.45 0.00 44.11 3.13
5204 13212 6.180472 AGAACTGAGTTCAAAGTCAAAGGAA 58.820 36.000 25.45 0.00 44.11 3.36
5205 13213 5.745227 AGAACTGAGTTCAAAGTCAAAGGA 58.255 37.500 25.45 0.00 44.11 3.36
5206 13214 6.442513 AAGAACTGAGTTCAAAGTCAAAGG 57.557 37.500 25.45 0.00 44.11 3.11
5207 13215 6.749118 CCAAAGAACTGAGTTCAAAGTCAAAG 59.251 38.462 25.45 6.20 44.11 2.77
5208 13216 6.208599 ACCAAAGAACTGAGTTCAAAGTCAAA 59.791 34.615 25.45 0.00 44.11 2.69
5209 13217 5.710099 ACCAAAGAACTGAGTTCAAAGTCAA 59.290 36.000 25.45 0.00 44.11 3.18
5210 13218 5.123820 CACCAAAGAACTGAGTTCAAAGTCA 59.876 40.000 25.45 0.65 44.11 3.41
5211 13219 5.449177 CCACCAAAGAACTGAGTTCAAAGTC 60.449 44.000 25.45 0.00 44.11 3.01
5212 13220 4.399303 CCACCAAAGAACTGAGTTCAAAGT 59.601 41.667 25.45 14.44 44.11 2.66
5213 13221 4.640201 TCCACCAAAGAACTGAGTTCAAAG 59.360 41.667 25.45 14.23 44.11 2.77
5214 13222 4.594970 TCCACCAAAGAACTGAGTTCAAA 58.405 39.130 25.45 0.95 44.11 2.69
5215 13223 4.229304 TCCACCAAAGAACTGAGTTCAA 57.771 40.909 25.45 0.00 44.11 2.69
5216 13224 3.924114 TCCACCAAAGAACTGAGTTCA 57.076 42.857 25.45 1.02 44.11 3.18
5217 13225 4.580580 ACAATCCACCAAAGAACTGAGTTC 59.419 41.667 17.22 17.22 42.25 3.01
5247 13505 0.395862 TAAGGCCAGCTCGCTCTACT 60.396 55.000 5.01 0.00 0.00 2.57
5254 13512 1.541233 CCTTACCATAAGGCCAGCTCG 60.541 57.143 5.01 0.00 39.06 5.03
5261 13519 3.681593 TCACAACACCTTACCATAAGGC 58.318 45.455 13.47 0.00 41.10 4.35
5280 13538 8.665643 ATTTCAATCAATCTTTTGCAACTTCA 57.334 26.923 0.00 0.00 32.61 3.02
5338 13596 6.550108 AGAGCAATGATGGCTAAAATTCTGAT 59.450 34.615 0.00 0.00 42.78 2.90
5357 13615 7.064609 CGAGAACAATATCCAAGTTTAGAGCAA 59.935 37.037 0.00 0.00 0.00 3.91
5362 13620 8.765219 CCATACGAGAACAATATCCAAGTTTAG 58.235 37.037 0.00 0.00 0.00 1.85
5367 13625 6.931281 ACATCCATACGAGAACAATATCCAAG 59.069 38.462 0.00 0.00 0.00 3.61
5395 13653 9.996554 TGCGAAGAGATATCATATTAGGAAAAA 57.003 29.630 5.32 0.00 0.00 1.94
5398 13656 8.122472 TGTGCGAAGAGATATCATATTAGGAA 57.878 34.615 5.32 0.00 0.00 3.36
5400 13658 8.939201 AATGTGCGAAGAGATATCATATTAGG 57.061 34.615 5.32 0.00 0.00 2.69
5427 13685 9.941664 CATGTCATGATCTTAAACTATTTGTCC 57.058 33.333 7.04 0.00 0.00 4.02
5460 13718 1.230635 TTGCGAGAAACTCCTGCAGC 61.231 55.000 8.66 0.00 36.83 5.25
5506 13764 8.474025 TCAAATTTGAACTAAAACCATGACACT 58.526 29.630 18.45 0.00 33.55 3.55
5537 13795 4.334759 AGCTGATCGGTTCAATGAATTCAG 59.665 41.667 14.54 16.63 32.78 3.02
5547 13805 2.353704 CCACAGTTAGCTGATCGGTTCA 60.354 50.000 14.09 0.00 45.28 3.18
5558 13816 4.708726 AAGATTTCATGCCACAGTTAGC 57.291 40.909 0.00 0.00 0.00 3.09
5609 13933 8.675888 GCAAAACGTCTTACATTAAGTTACAAC 58.324 33.333 0.00 0.00 37.10 3.32
5654 13978 4.890088 TCTGTAACTTGATGTAAGGCGTT 58.110 39.130 0.00 0.00 40.84 4.84
5656 13980 4.744570 TCTCTGTAACTTGATGTAAGGCG 58.255 43.478 0.00 0.00 40.84 5.52
5697 14021 5.789710 TTTAGAGGCGTGCTGTATTTTAC 57.210 39.130 0.00 0.00 0.00 2.01
5760 14085 9.685005 CGAAACGAAATTGGAGTATTAAGTTAG 57.315 33.333 0.00 0.00 0.00 2.34
5761 14086 9.206870 ACGAAACGAAATTGGAGTATTAAGTTA 57.793 29.630 0.00 0.00 0.00 2.24
5762 14087 8.091385 ACGAAACGAAATTGGAGTATTAAGTT 57.909 30.769 0.00 0.00 0.00 2.66
5763 14088 7.662604 ACGAAACGAAATTGGAGTATTAAGT 57.337 32.000 0.00 0.00 0.00 2.24
5764 14089 8.944212 AAACGAAACGAAATTGGAGTATTAAG 57.056 30.769 0.00 0.00 0.00 1.85
5765 14090 9.384682 GAAAACGAAACGAAATTGGAGTATTAA 57.615 29.630 0.00 0.00 0.00 1.40
5766 14091 7.741216 CGAAAACGAAACGAAATTGGAGTATTA 59.259 33.333 0.00 0.00 0.00 0.98
5767 14092 6.575942 CGAAAACGAAACGAAATTGGAGTATT 59.424 34.615 0.00 0.00 0.00 1.89
5768 14093 6.075280 CGAAAACGAAACGAAATTGGAGTAT 58.925 36.000 0.00 0.00 0.00 2.12
5769 14094 5.433855 CGAAAACGAAACGAAATTGGAGTA 58.566 37.500 0.00 0.00 0.00 2.59
5770 14095 4.276460 CGAAAACGAAACGAAATTGGAGT 58.724 39.130 0.00 0.00 0.00 3.85
5771 14096 3.662186 CCGAAAACGAAACGAAATTGGAG 59.338 43.478 0.00 0.00 0.00 3.86
5772 14097 3.065095 ACCGAAAACGAAACGAAATTGGA 59.935 39.130 0.00 0.00 0.00 3.53
5773 14098 3.178814 CACCGAAAACGAAACGAAATTGG 59.821 43.478 0.00 0.00 0.00 3.16
5774 14099 4.029704 TCACCGAAAACGAAACGAAATTG 58.970 39.130 0.00 0.00 0.00 2.32
5775 14100 4.275838 TCACCGAAAACGAAACGAAATT 57.724 36.364 0.00 0.00 0.00 1.82
5776 14101 3.948196 TCACCGAAAACGAAACGAAAT 57.052 38.095 0.00 0.00 0.00 2.17
5777 14102 3.948196 ATCACCGAAAACGAAACGAAA 57.052 38.095 0.00 0.00 0.00 3.46
5778 14103 3.948196 AATCACCGAAAACGAAACGAA 57.052 38.095 0.00 0.00 0.00 3.85
5779 14104 3.063725 ACAAATCACCGAAAACGAAACGA 59.936 39.130 0.00 0.00 0.00 3.85
5780 14105 3.356145 ACAAATCACCGAAAACGAAACG 58.644 40.909 0.00 0.00 0.00 3.60
5781 14106 4.559643 ACAACAAATCACCGAAAACGAAAC 59.440 37.500 0.00 0.00 0.00 2.78
5782 14107 4.559251 CACAACAAATCACCGAAAACGAAA 59.441 37.500 0.00 0.00 0.00 3.46
5783 14108 4.099120 CACAACAAATCACCGAAAACGAA 58.901 39.130 0.00 0.00 0.00 3.85
5784 14109 3.127203 ACACAACAAATCACCGAAAACGA 59.873 39.130 0.00 0.00 0.00 3.85
5785 14110 3.239483 CACACAACAAATCACCGAAAACG 59.761 43.478 0.00 0.00 0.00 3.60
5786 14111 3.000177 GCACACAACAAATCACCGAAAAC 60.000 43.478 0.00 0.00 0.00 2.43
5787 14112 3.182967 GCACACAACAAATCACCGAAAA 58.817 40.909 0.00 0.00 0.00 2.29
5788 14113 2.792890 CGCACACAACAAATCACCGAAA 60.793 45.455 0.00 0.00 0.00 3.46
5789 14114 1.268285 CGCACACAACAAATCACCGAA 60.268 47.619 0.00 0.00 0.00 4.30
5790 14115 0.306228 CGCACACAACAAATCACCGA 59.694 50.000 0.00 0.00 0.00 4.69
5791 14116 0.028770 ACGCACACAACAAATCACCG 59.971 50.000 0.00 0.00 0.00 4.94
5792 14117 1.064803 TCACGCACACAACAAATCACC 59.935 47.619 0.00 0.00 0.00 4.02
5793 14118 2.466870 TCACGCACACAACAAATCAC 57.533 45.000 0.00 0.00 0.00 3.06
5794 14119 2.349343 CGATCACGCACACAACAAATCA 60.349 45.455 0.00 0.00 0.00 2.57
5795 14120 2.233355 CGATCACGCACACAACAAATC 58.767 47.619 0.00 0.00 0.00 2.17
5796 14121 1.069296 CCGATCACGCACACAACAAAT 60.069 47.619 0.00 0.00 38.29 2.32
5797 14122 0.306228 CCGATCACGCACACAACAAA 59.694 50.000 0.00 0.00 38.29 2.83
5798 14123 0.812014 ACCGATCACGCACACAACAA 60.812 50.000 0.00 0.00 38.29 2.83
5799 14124 0.032267 TACCGATCACGCACACAACA 59.968 50.000 0.00 0.00 38.29 3.33
5800 14125 1.141645 TTACCGATCACGCACACAAC 58.858 50.000 0.00 0.00 38.29 3.32
5801 14126 1.867166 TTTACCGATCACGCACACAA 58.133 45.000 0.00 0.00 38.29 3.33
5802 14127 2.087501 ATTTACCGATCACGCACACA 57.912 45.000 0.00 0.00 38.29 3.72
5803 14128 3.465122 AAATTTACCGATCACGCACAC 57.535 42.857 0.00 0.00 38.29 3.82
5804 14129 5.804692 AATAAATTTACCGATCACGCACA 57.195 34.783 0.00 0.00 38.29 4.57
5805 14130 6.410914 CAGAAATAAATTTACCGATCACGCAC 59.589 38.462 0.00 0.00 38.29 5.34
5806 14131 6.457663 CCAGAAATAAATTTACCGATCACGCA 60.458 38.462 0.00 0.00 38.29 5.24
5807 14132 5.907391 CCAGAAATAAATTTACCGATCACGC 59.093 40.000 0.00 0.00 38.29 5.34
5808 14133 5.907391 GCCAGAAATAAATTTACCGATCACG 59.093 40.000 0.00 0.00 39.43 4.35
5809 14134 7.027778 AGCCAGAAATAAATTTACCGATCAC 57.972 36.000 0.00 0.00 0.00 3.06
5810 14135 6.018262 CGAGCCAGAAATAAATTTACCGATCA 60.018 38.462 0.00 0.00 0.00 2.92
5811 14136 6.363473 CGAGCCAGAAATAAATTTACCGATC 58.637 40.000 0.00 0.00 0.00 3.69
5812 14137 5.277828 GCGAGCCAGAAATAAATTTACCGAT 60.278 40.000 0.00 0.00 0.00 4.18
5813 14138 4.034742 GCGAGCCAGAAATAAATTTACCGA 59.965 41.667 0.00 0.00 0.00 4.69
5814 14139 4.201871 TGCGAGCCAGAAATAAATTTACCG 60.202 41.667 0.00 0.00 0.00 4.02
5815 14140 5.243426 TGCGAGCCAGAAATAAATTTACC 57.757 39.130 0.00 0.00 0.00 2.85
5816 14141 6.198966 CCAATGCGAGCCAGAAATAAATTTAC 59.801 38.462 0.00 0.00 0.00 2.01
5817 14142 6.272318 CCAATGCGAGCCAGAAATAAATTTA 58.728 36.000 0.00 0.00 0.00 1.40
5818 14143 5.111293 CCAATGCGAGCCAGAAATAAATTT 58.889 37.500 0.00 0.00 0.00 1.82
5819 14144 4.685924 CCAATGCGAGCCAGAAATAAATT 58.314 39.130 0.00 0.00 0.00 1.82
5820 14145 3.491447 GCCAATGCGAGCCAGAAATAAAT 60.491 43.478 0.00 0.00 0.00 1.40
5821 14146 2.159254 GCCAATGCGAGCCAGAAATAAA 60.159 45.455 0.00 0.00 0.00 1.40
5822 14147 1.405105 GCCAATGCGAGCCAGAAATAA 59.595 47.619 0.00 0.00 0.00 1.40
5823 14148 1.024271 GCCAATGCGAGCCAGAAATA 58.976 50.000 0.00 0.00 0.00 1.40
5824 14149 0.682209 AGCCAATGCGAGCCAGAAAT 60.682 50.000 0.00 0.00 44.33 2.17
5825 14150 0.895100 AAGCCAATGCGAGCCAGAAA 60.895 50.000 0.00 0.00 44.33 2.52
5826 14151 1.303561 AAGCCAATGCGAGCCAGAA 60.304 52.632 0.00 0.00 44.33 3.02
5827 14152 1.746615 GAAGCCAATGCGAGCCAGA 60.747 57.895 0.00 0.00 44.33 3.86
5828 14153 2.768492 GGAAGCCAATGCGAGCCAG 61.768 63.158 0.00 0.00 44.33 4.85
5829 14154 1.909459 TAGGAAGCCAATGCGAGCCA 61.909 55.000 0.00 0.00 44.33 4.75
5830 14155 1.153168 TAGGAAGCCAATGCGAGCC 60.153 57.895 0.00 0.00 44.33 4.70
5831 14156 0.744414 TGTAGGAAGCCAATGCGAGC 60.744 55.000 0.00 0.00 44.33 5.03
5832 14157 1.398390 GTTGTAGGAAGCCAATGCGAG 59.602 52.381 0.00 0.00 44.33 5.03
5833 14158 1.448985 GTTGTAGGAAGCCAATGCGA 58.551 50.000 0.00 0.00 44.33 5.10
5834 14159 0.096976 CGTTGTAGGAAGCCAATGCG 59.903 55.000 0.00 0.00 44.33 4.73
5835 14160 1.448985 TCGTTGTAGGAAGCCAATGC 58.551 50.000 0.00 0.00 37.95 3.56
5836 14161 4.273480 CCTAATCGTTGTAGGAAGCCAATG 59.727 45.833 3.61 0.00 40.67 2.82
5837 14162 4.451900 CCTAATCGTTGTAGGAAGCCAAT 58.548 43.478 3.61 0.00 40.67 3.16
5838 14163 3.869065 CCTAATCGTTGTAGGAAGCCAA 58.131 45.455 3.61 0.00 40.67 4.52
5839 14164 2.419574 GCCTAATCGTTGTAGGAAGCCA 60.420 50.000 11.41 0.00 40.67 4.75
5840 14165 2.210961 GCCTAATCGTTGTAGGAAGCC 58.789 52.381 11.41 0.00 40.67 4.35
5841 14166 2.210961 GGCCTAATCGTTGTAGGAAGC 58.789 52.381 11.41 0.00 40.67 3.86
5842 14167 2.434702 AGGGCCTAATCGTTGTAGGAAG 59.565 50.000 2.82 0.00 40.67 3.46
5843 14168 2.433239 GAGGGCCTAATCGTTGTAGGAA 59.567 50.000 5.73 0.00 40.67 3.36
5844 14169 2.037144 GAGGGCCTAATCGTTGTAGGA 58.963 52.381 5.73 0.00 40.67 2.94
5845 14170 2.040178 AGAGGGCCTAATCGTTGTAGG 58.960 52.381 5.73 4.95 41.08 3.18
5846 14171 3.821421 AAGAGGGCCTAATCGTTGTAG 57.179 47.619 5.73 0.00 0.00 2.74
5847 14172 3.516300 TCAAAGAGGGCCTAATCGTTGTA 59.484 43.478 21.27 11.91 36.62 2.41
5848 14173 2.304761 TCAAAGAGGGCCTAATCGTTGT 59.695 45.455 21.27 0.00 36.62 3.32
5849 14174 2.985896 TCAAAGAGGGCCTAATCGTTG 58.014 47.619 5.73 18.40 36.59 4.10
5850 14175 3.933861 ATCAAAGAGGGCCTAATCGTT 57.066 42.857 5.73 0.00 0.00 3.85
5851 14176 3.741388 CGAATCAAAGAGGGCCTAATCGT 60.741 47.826 5.73 0.00 0.00 3.73
5852 14177 2.802816 CGAATCAAAGAGGGCCTAATCG 59.197 50.000 5.73 0.26 0.00 3.34
5853 14178 2.550180 GCGAATCAAAGAGGGCCTAATC 59.450 50.000 5.73 0.00 0.00 1.75
5854 14179 2.092429 TGCGAATCAAAGAGGGCCTAAT 60.092 45.455 5.73 0.00 0.00 1.73
5855 14180 1.280710 TGCGAATCAAAGAGGGCCTAA 59.719 47.619 5.73 0.00 0.00 2.69
5856 14181 0.908910 TGCGAATCAAAGAGGGCCTA 59.091 50.000 5.73 0.00 0.00 3.93
5857 14182 0.393537 CTGCGAATCAAAGAGGGCCT 60.394 55.000 5.25 5.25 0.00 5.19
5858 14183 1.379642 CCTGCGAATCAAAGAGGGCC 61.380 60.000 0.00 0.00 0.00 5.80
5859 14184 0.392998 TCCTGCGAATCAAAGAGGGC 60.393 55.000 0.00 0.00 0.00 5.19
5860 14185 2.338577 ATCCTGCGAATCAAAGAGGG 57.661 50.000 0.00 0.00 0.00 4.30
5861 14186 4.156556 TGAAAATCCTGCGAATCAAAGAGG 59.843 41.667 0.00 0.00 0.00 3.69
5862 14187 5.300969 TGAAAATCCTGCGAATCAAAGAG 57.699 39.130 0.00 0.00 0.00 2.85
5863 14188 5.703978 TTGAAAATCCTGCGAATCAAAGA 57.296 34.783 0.00 0.00 0.00 2.52
5864 14189 6.584056 GTTTTGAAAATCCTGCGAATCAAAG 58.416 36.000 0.00 0.00 0.00 2.77
5865 14190 5.174761 CGTTTTGAAAATCCTGCGAATCAAA 59.825 36.000 0.00 0.00 0.00 2.69
5866 14191 4.679197 CGTTTTGAAAATCCTGCGAATCAA 59.321 37.500 0.00 0.00 0.00 2.57
5867 14192 4.225984 CGTTTTGAAAATCCTGCGAATCA 58.774 39.130 0.00 0.00 0.00 2.57
5868 14193 4.226761 ACGTTTTGAAAATCCTGCGAATC 58.773 39.130 4.92 0.00 0.00 2.52
5869 14194 4.237349 ACGTTTTGAAAATCCTGCGAAT 57.763 36.364 4.92 0.00 0.00 3.34
5870 14195 3.701532 ACGTTTTGAAAATCCTGCGAA 57.298 38.095 4.92 0.00 0.00 4.70
5871 14196 3.187637 CCTACGTTTTGAAAATCCTGCGA 59.812 43.478 0.00 0.00 0.00 5.10
5872 14197 3.187637 TCCTACGTTTTGAAAATCCTGCG 59.812 43.478 0.00 0.00 0.00 5.18
5873 14198 4.759516 TCCTACGTTTTGAAAATCCTGC 57.240 40.909 0.00 0.00 0.00 4.85
5874 14199 7.335924 TCCTATTCCTACGTTTTGAAAATCCTG 59.664 37.037 0.00 0.00 0.00 3.86
5875 14200 7.399634 TCCTATTCCTACGTTTTGAAAATCCT 58.600 34.615 0.00 0.00 0.00 3.24
5876 14201 7.619964 TCCTATTCCTACGTTTTGAAAATCC 57.380 36.000 0.00 0.00 0.00 3.01
5877 14202 9.902196 TTTTCCTATTCCTACGTTTTGAAAATC 57.098 29.630 0.00 0.00 0.00 2.17
5878 14203 9.908152 CTTTTCCTATTCCTACGTTTTGAAAAT 57.092 29.630 0.00 0.00 31.26 1.82
5879 14204 8.905850 ACTTTTCCTATTCCTACGTTTTGAAAA 58.094 29.630 0.00 0.00 0.00 2.29
5880 14205 8.454570 ACTTTTCCTATTCCTACGTTTTGAAA 57.545 30.769 0.00 0.00 0.00 2.69
5881 14206 9.729281 ATACTTTTCCTATTCCTACGTTTTGAA 57.271 29.630 0.00 0.00 0.00 2.69
5884 14209 9.828039 CCTATACTTTTCCTATTCCTACGTTTT 57.172 33.333 0.00 0.00 0.00 2.43
5885 14210 8.427276 CCCTATACTTTTCCTATTCCTACGTTT 58.573 37.037 0.00 0.00 0.00 3.60
5886 14211 7.566509 ACCCTATACTTTTCCTATTCCTACGTT 59.433 37.037 0.00 0.00 0.00 3.99
5887 14212 7.071917 ACCCTATACTTTTCCTATTCCTACGT 58.928 38.462 0.00 0.00 0.00 3.57
5888 14213 7.536159 ACCCTATACTTTTCCTATTCCTACG 57.464 40.000 0.00 0.00 0.00 3.51
5889 14214 8.155510 CCAACCCTATACTTTTCCTATTCCTAC 58.844 40.741 0.00 0.00 0.00 3.18
5890 14215 8.075621 TCCAACCCTATACTTTTCCTATTCCTA 58.924 37.037 0.00 0.00 0.00 2.94
5891 14216 6.912561 TCCAACCCTATACTTTTCCTATTCCT 59.087 38.462 0.00 0.00 0.00 3.36
5892 14217 7.145474 TCCAACCCTATACTTTTCCTATTCC 57.855 40.000 0.00 0.00 0.00 3.01
5893 14218 7.715686 CACTCCAACCCTATACTTTTCCTATTC 59.284 40.741 0.00 0.00 0.00 1.75
5894 14219 7.366551 CCACTCCAACCCTATACTTTTCCTATT 60.367 40.741 0.00 0.00 0.00 1.73
5895 14220 6.101296 CCACTCCAACCCTATACTTTTCCTAT 59.899 42.308 0.00 0.00 0.00 2.57
5896 14221 5.427481 CCACTCCAACCCTATACTTTTCCTA 59.573 44.000 0.00 0.00 0.00 2.94
5897 14222 4.227527 CCACTCCAACCCTATACTTTTCCT 59.772 45.833 0.00 0.00 0.00 3.36
5898 14223 4.524053 CCACTCCAACCCTATACTTTTCC 58.476 47.826 0.00 0.00 0.00 3.13
5899 14224 3.945921 GCCACTCCAACCCTATACTTTTC 59.054 47.826 0.00 0.00 0.00 2.29
5900 14225 3.332485 TGCCACTCCAACCCTATACTTTT 59.668 43.478 0.00 0.00 0.00 2.27
5901 14226 2.916934 TGCCACTCCAACCCTATACTTT 59.083 45.455 0.00 0.00 0.00 2.66
5902 14227 2.557869 TGCCACTCCAACCCTATACTT 58.442 47.619 0.00 0.00 0.00 2.24
5903 14228 2.263895 TGCCACTCCAACCCTATACT 57.736 50.000 0.00 0.00 0.00 2.12
5904 14229 2.851195 CATGCCACTCCAACCCTATAC 58.149 52.381 0.00 0.00 0.00 1.47
5905 14230 1.142870 GCATGCCACTCCAACCCTATA 59.857 52.381 6.36 0.00 0.00 1.31
5906 14231 0.106519 GCATGCCACTCCAACCCTAT 60.107 55.000 6.36 0.00 0.00 2.57
5907 14232 1.302949 GCATGCCACTCCAACCCTA 59.697 57.895 6.36 0.00 0.00 3.53
5908 14233 2.036256 GCATGCCACTCCAACCCT 59.964 61.111 6.36 0.00 0.00 4.34
5909 14234 2.283101 TGCATGCCACTCCAACCC 60.283 61.111 16.68 0.00 0.00 4.11
5910 14235 1.902918 TGTGCATGCCACTCCAACC 60.903 57.895 16.68 0.00 44.92 3.77
5911 14236 1.286880 GTGTGCATGCCACTCCAAC 59.713 57.895 23.79 12.15 44.92 3.77
5912 14237 0.540133 ATGTGTGCATGCCACTCCAA 60.540 50.000 28.04 15.69 44.92 3.53
5913 14238 1.075305 ATGTGTGCATGCCACTCCA 59.925 52.632 28.04 19.77 44.92 3.86
5914 14239 1.509463 CATGTGTGCATGCCACTCC 59.491 57.895 28.04 16.35 44.87 3.85
5920 14245 6.274623 CCTGTAGGATTCATGTGTGCATGC 62.275 50.000 11.82 11.82 43.87 4.06
5921 14246 3.314357 CCTGTAGGATTCATGTGTGCATG 59.686 47.826 0.00 1.50 44.73 4.06
5922 14247 3.200605 TCCTGTAGGATTCATGTGTGCAT 59.799 43.478 0.00 0.00 39.78 3.96
5923 14248 2.571202 TCCTGTAGGATTCATGTGTGCA 59.429 45.455 0.00 0.00 39.78 4.57
5924 14249 3.266510 TCCTGTAGGATTCATGTGTGC 57.733 47.619 0.00 0.00 39.78 4.57
5936 14261 3.389329 ACACTCCATGCTAATCCTGTAGG 59.611 47.826 0.00 0.00 0.00 3.18
5937 14262 4.679373 ACACTCCATGCTAATCCTGTAG 57.321 45.455 0.00 0.00 0.00 2.74
5938 14263 5.045942 TCAAACACTCCATGCTAATCCTGTA 60.046 40.000 0.00 0.00 0.00 2.74
5939 14264 4.012374 CAAACACTCCATGCTAATCCTGT 58.988 43.478 0.00 0.00 0.00 4.00
5940 14265 4.264253 TCAAACACTCCATGCTAATCCTG 58.736 43.478 0.00 0.00 0.00 3.86
5941 14266 4.574674 TCAAACACTCCATGCTAATCCT 57.425 40.909 0.00 0.00 0.00 3.24
5942 14267 4.037208 CCATCAAACACTCCATGCTAATCC 59.963 45.833 0.00 0.00 0.00 3.01
5943 14268 4.498682 GCCATCAAACACTCCATGCTAATC 60.499 45.833 0.00 0.00 0.00 1.75
5944 14269 3.382546 GCCATCAAACACTCCATGCTAAT 59.617 43.478 0.00 0.00 0.00 1.73
5945 14270 2.754552 GCCATCAAACACTCCATGCTAA 59.245 45.455 0.00 0.00 0.00 3.09
5946 14271 2.290832 TGCCATCAAACACTCCATGCTA 60.291 45.455 0.00 0.00 0.00 3.49
5947 14272 1.180029 GCCATCAAACACTCCATGCT 58.820 50.000 0.00 0.00 0.00 3.79
5948 14273 0.889994 TGCCATCAAACACTCCATGC 59.110 50.000 0.00 0.00 0.00 4.06
5949 14274 1.887854 TGTGCCATCAAACACTCCATG 59.112 47.619 0.00 0.00 37.68 3.66
5950 14275 2.165167 CTGTGCCATCAAACACTCCAT 58.835 47.619 0.00 0.00 37.68 3.41
5951 14276 1.608055 CTGTGCCATCAAACACTCCA 58.392 50.000 0.00 0.00 37.68 3.86
5952 14277 0.883833 CCTGTGCCATCAAACACTCC 59.116 55.000 0.00 0.00 37.68 3.85
5953 14278 1.896220 TCCTGTGCCATCAAACACTC 58.104 50.000 0.00 0.00 37.68 3.51
5954 14279 2.363306 TTCCTGTGCCATCAAACACT 57.637 45.000 0.00 0.00 37.68 3.55
5955 14280 3.383761 CTTTTCCTGTGCCATCAAACAC 58.616 45.455 0.00 0.00 37.31 3.32
5956 14281 2.224018 GCTTTTCCTGTGCCATCAAACA 60.224 45.455 0.00 0.00 0.00 2.83
5957 14282 2.224018 TGCTTTTCCTGTGCCATCAAAC 60.224 45.455 0.00 0.00 0.00 2.93
5958 14283 2.037901 TGCTTTTCCTGTGCCATCAAA 58.962 42.857 0.00 0.00 0.00 2.69
5959 14284 1.702182 TGCTTTTCCTGTGCCATCAA 58.298 45.000 0.00 0.00 0.00 2.57
5960 14285 1.702182 TTGCTTTTCCTGTGCCATCA 58.298 45.000 0.00 0.00 0.00 3.07
5961 14286 2.818130 TTTGCTTTTCCTGTGCCATC 57.182 45.000 0.00 0.00 0.00 3.51
5962 14287 2.699846 TCTTTTGCTTTTCCTGTGCCAT 59.300 40.909 0.00 0.00 0.00 4.40
5963 14288 2.106566 TCTTTTGCTTTTCCTGTGCCA 58.893 42.857 0.00 0.00 0.00 4.92
5964 14289 2.888834 TCTTTTGCTTTTCCTGTGCC 57.111 45.000 0.00 0.00 0.00 5.01
5965 14290 4.571984 ACAATTCTTTTGCTTTTCCTGTGC 59.428 37.500 0.00 0.00 0.00 4.57
5966 14291 7.769272 TTACAATTCTTTTGCTTTTCCTGTG 57.231 32.000 0.00 0.00 0.00 3.66
5967 14292 8.785329 TTTTACAATTCTTTTGCTTTTCCTGT 57.215 26.923 0.00 0.00 0.00 4.00
5968 14293 9.706846 CTTTTTACAATTCTTTTGCTTTTCCTG 57.293 29.630 0.00 0.00 0.00 3.86
5969 14294 9.665719 TCTTTTTACAATTCTTTTGCTTTTCCT 57.334 25.926 0.00 0.00 0.00 3.36
5970 14295 9.920826 CTCTTTTTACAATTCTTTTGCTTTTCC 57.079 29.630 0.00 0.00 0.00 3.13
5971 14296 9.920826 CCTCTTTTTACAATTCTTTTGCTTTTC 57.079 29.630 0.00 0.00 0.00 2.29
5972 14297 9.448438 ACCTCTTTTTACAATTCTTTTGCTTTT 57.552 25.926 0.00 0.00 0.00 2.27
5973 14298 9.448438 AACCTCTTTTTACAATTCTTTTGCTTT 57.552 25.926 0.00 0.00 0.00 3.51
5974 14299 8.882736 CAACCTCTTTTTACAATTCTTTTGCTT 58.117 29.630 0.00 0.00 0.00 3.91
5975 14300 7.495606 CCAACCTCTTTTTACAATTCTTTTGCT 59.504 33.333 0.00 0.00 0.00 3.91
5976 14301 7.494298 TCCAACCTCTTTTTACAATTCTTTTGC 59.506 33.333 0.00 0.00 0.00 3.68
5977 14302 8.940768 TCCAACCTCTTTTTACAATTCTTTTG 57.059 30.769 0.00 0.00 0.00 2.44
5978 14303 8.758829 ACTCCAACCTCTTTTTACAATTCTTTT 58.241 29.630 0.00 0.00 0.00 2.27
5979 14304 8.197439 CACTCCAACCTCTTTTTACAATTCTTT 58.803 33.333 0.00 0.00 0.00 2.52
5980 14305 7.201911 CCACTCCAACCTCTTTTTACAATTCTT 60.202 37.037 0.00 0.00 0.00 2.52
5981 14306 6.265422 CCACTCCAACCTCTTTTTACAATTCT 59.735 38.462 0.00 0.00 0.00 2.40
5982 14307 6.264518 TCCACTCCAACCTCTTTTTACAATTC 59.735 38.462 0.00 0.00 0.00 2.17
5983 14308 6.133356 TCCACTCCAACCTCTTTTTACAATT 58.867 36.000 0.00 0.00 0.00 2.32
5984 14309 5.701224 TCCACTCCAACCTCTTTTTACAAT 58.299 37.500 0.00 0.00 0.00 2.71
5985 14310 5.118729 TCCACTCCAACCTCTTTTTACAA 57.881 39.130 0.00 0.00 0.00 2.41
5986 14311 4.781775 TCCACTCCAACCTCTTTTTACA 57.218 40.909 0.00 0.00 0.00 2.41
5987 14312 5.070685 ACATCCACTCCAACCTCTTTTTAC 58.929 41.667 0.00 0.00 0.00 2.01
5988 14313 5.319043 ACATCCACTCCAACCTCTTTTTA 57.681 39.130 0.00 0.00 0.00 1.52
5989 14314 4.184649 ACATCCACTCCAACCTCTTTTT 57.815 40.909 0.00 0.00 0.00 1.94
5990 14315 3.884037 ACATCCACTCCAACCTCTTTT 57.116 42.857 0.00 0.00 0.00 2.27
5991 14316 3.884037 AACATCCACTCCAACCTCTTT 57.116 42.857 0.00 0.00 0.00 2.52
5992 14317 4.168101 TCTAACATCCACTCCAACCTCTT 58.832 43.478 0.00 0.00 0.00 2.85
5993 14318 3.791320 TCTAACATCCACTCCAACCTCT 58.209 45.455 0.00 0.00 0.00 3.69
5994 14319 4.762289 ATCTAACATCCACTCCAACCTC 57.238 45.455 0.00 0.00 0.00 3.85
5995 14320 5.501156 GAAATCTAACATCCACTCCAACCT 58.499 41.667 0.00 0.00 0.00 3.50
5996 14321 4.640647 GGAAATCTAACATCCACTCCAACC 59.359 45.833 0.00 0.00 33.30 3.77
5997 14322 5.501156 AGGAAATCTAACATCCACTCCAAC 58.499 41.667 0.00 0.00 35.62 3.77
5998 14323 5.779241 AGGAAATCTAACATCCACTCCAA 57.221 39.130 0.00 0.00 35.62 3.53
5999 14324 6.615316 TCATAGGAAATCTAACATCCACTCCA 59.385 38.462 0.00 0.00 35.62 3.86
6000 14325 7.067496 TCATAGGAAATCTAACATCCACTCC 57.933 40.000 0.00 0.00 35.62 3.85
6001 14326 8.964476 TTTCATAGGAAATCTAACATCCACTC 57.036 34.615 0.00 0.00 38.07 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.