Multiple sequence alignment - TraesCS1A01G348300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G348300 chr1A 100.000 2715 0 0 1 2715 533696646 533693932 0.000000e+00 5014.0
1 TraesCS1A01G348300 chr1A 97.826 92 0 2 2583 2673 533693974 533694064 1.010000e-34 158.0
2 TraesCS1A01G348300 chr1A 92.727 55 4 0 2091 2145 533671798 533671744 2.240000e-11 80.5
3 TraesCS1A01G348300 chr1B 91.074 1322 55 25 3 1289 591428244 591426951 0.000000e+00 1729.0
4 TraesCS1A01G348300 chr1B 96.535 635 13 5 1445 2073 591426958 591426327 0.000000e+00 1042.0
5 TraesCS1A01G348300 chr1B 86.282 503 52 11 790 1289 593683508 593683996 5.150000e-147 531.0
6 TraesCS1A01G348300 chr1B 83.302 527 58 15 765 1289 593721487 593721985 2.460000e-125 459.0
7 TraesCS1A01G348300 chr1B 90.759 303 23 3 1448 1746 593684000 593684301 1.510000e-107 399.0
8 TraesCS1A01G348300 chr1B 92.653 245 13 3 1448 1688 593721989 593722232 5.560000e-92 348.0
9 TraesCS1A01G348300 chr1B 92.683 205 14 1 988 1192 591359707 591359504 7.350000e-76 294.0
10 TraesCS1A01G348300 chr1B 93.889 180 6 2 2315 2494 591426137 591425963 1.600000e-67 267.0
11 TraesCS1A01G348300 chr1B 96.226 159 3 3 1290 1446 550314921 550314764 9.650000e-65 257.0
12 TraesCS1A01G348300 chr1B 92.442 172 10 3 2134 2303 488538927 488539097 2.700000e-60 243.0
13 TraesCS1A01G348300 chr1B 94.000 100 4 2 2481 2578 482722129 482722030 1.680000e-32 150.0
14 TraesCS1A01G348300 chr1B 94.000 100 4 2 2481 2578 482753289 482753190 1.680000e-32 150.0
15 TraesCS1A01G348300 chr1B 93.243 74 4 1 2073 2145 591426208 591426135 1.030000e-19 108.0
16 TraesCS1A01G348300 chr1B 95.918 49 2 0 2667 2715 591425956 591425908 2.240000e-11 80.5
17 TraesCS1A01G348300 chr1B 92.727 55 3 1 2091 2145 593684731 593684784 8.060000e-11 78.7
18 TraesCS1A01G348300 chr1D 91.291 643 33 5 650 1289 436615835 436615213 0.000000e+00 856.0
19 TraesCS1A01G348300 chr1D 94.142 478 27 1 177 653 436616450 436615973 0.000000e+00 726.0
20 TraesCS1A01G348300 chr1D 85.893 638 41 21 1445 2073 436615220 436614623 3.810000e-178 634.0
21 TraesCS1A01G348300 chr1D 84.746 295 30 8 902 1194 436377321 436377040 5.720000e-72 281.0
22 TraesCS1A01G348300 chr1D 93.578 109 7 0 1511 1619 436335560 436335452 2.160000e-36 163.0
23 TraesCS1A01G348300 chr1D 93.396 106 3 4 1 103 436616827 436616723 1.300000e-33 154.0
24 TraesCS1A01G348300 chr1D 75.191 262 31 19 1886 2144 436335250 436335020 2.880000e-15 93.5
25 TraesCS1A01G348300 chr4A 93.947 413 14 5 203 615 653640739 653640338 4.970000e-172 614.0
26 TraesCS1A01G348300 chr4A 96.863 255 8 0 361 615 653698259 653698513 6.950000e-116 427.0
27 TraesCS1A01G348300 chr4A 95.312 64 1 2 203 266 653698200 653698261 1.720000e-17 100.0
28 TraesCS1A01G348300 chrUn 96.863 255 8 0 361 615 331933762 331933508 6.950000e-116 427.0
29 TraesCS1A01G348300 chrUn 93.210 162 10 1 2142 2303 31220495 31220655 1.260000e-58 237.0
30 TraesCS1A01G348300 chrUn 96.774 93 3 0 2491 2583 100223825 100223733 3.620000e-34 156.0
31 TraesCS1A01G348300 chrUn 93.204 103 6 1 2480 2582 17103755 17103856 1.680000e-32 150.0
32 TraesCS1A01G348300 chrUn 93.204 103 6 1 2480 2582 17126099 17126200 1.680000e-32 150.0
33 TraesCS1A01G348300 chrUn 95.312 64 1 2 203 266 331933821 331933760 1.720000e-17 100.0
34 TraesCS1A01G348300 chr6B 94.904 157 6 2 1290 1444 72113696 72113540 7.510000e-61 244.0
35 TraesCS1A01G348300 chr6B 91.566 166 13 1 2138 2303 699977615 699977451 7.560000e-56 228.0
36 TraesCS1A01G348300 chr6B 94.949 99 4 1 2485 2583 187829242 187829339 1.300000e-33 154.0
37 TraesCS1A01G348300 chr4B 92.121 165 11 2 2143 2306 483266379 483266542 5.850000e-57 231.0
38 TraesCS1A01G348300 chr4B 92.547 161 11 1 2143 2303 63754002 63753843 2.100000e-56 230.0
39 TraesCS1A01G348300 chr3D 91.667 168 13 1 2139 2306 238999579 238999413 5.850000e-57 231.0
40 TraesCS1A01G348300 chr3A 93.038 158 11 0 1290 1447 527357027 527356870 5.850000e-57 231.0
41 TraesCS1A01G348300 chr3A 91.975 162 12 1 2142 2303 586886921 586886761 2.720000e-55 226.0
42 TraesCS1A01G348300 chr3A 87.179 156 19 1 1290 1444 583962854 583962699 2.780000e-40 176.0
43 TraesCS1A01G348300 chr2D 92.593 162 10 2 2144 2303 305515032 305514871 5.850000e-57 231.0
44 TraesCS1A01G348300 chr2D 91.124 169 13 2 2139 2306 445733667 445733834 7.560000e-56 228.0
45 TraesCS1A01G348300 chr2D 93.204 103 6 1 2480 2582 640897885 640897784 1.680000e-32 150.0
46 TraesCS1A01G348300 chr2D 90.741 108 10 0 2564 2671 188886063 188886170 7.830000e-31 145.0
47 TraesCS1A01G348300 chr6A 87.975 158 17 2 1288 1443 327762527 327762684 4.620000e-43 185.0
48 TraesCS1A01G348300 chr2B 87.578 161 16 3 1287 1444 671771937 671771778 1.660000e-42 183.0
49 TraesCS1A01G348300 chr7B 86.875 160 19 1 1287 1444 712683811 712683970 7.720000e-41 178.0
50 TraesCS1A01G348300 chr7B 87.179 156 17 2 1288 1440 198966171 198966016 9.990000e-40 174.0
51 TraesCS1A01G348300 chr5B 86.957 161 17 3 1287 1444 470482627 470482786 7.720000e-41 178.0
52 TraesCS1A01G348300 chr5B 92.453 106 6 2 2566 2670 140965910 140966014 1.680000e-32 150.0
53 TraesCS1A01G348300 chr5B 88.430 121 6 6 2558 2673 278886898 278886781 3.650000e-29 139.0
54 TraesCS1A01G348300 chr5D 93.396 106 5 2 2566 2670 128577568 128577672 3.620000e-34 156.0
55 TraesCS1A01G348300 chr5D 81.915 188 23 9 2487 2671 517755592 517755413 6.060000e-32 148.0
56 TraesCS1A01G348300 chr6D 92.381 105 5 3 2570 2674 199210425 199210324 2.180000e-31 147.0
57 TraesCS1A01G348300 chr3B 87.402 127 7 7 2553 2672 450376678 450376554 1.310000e-28 137.0
58 TraesCS1A01G348300 chr3B 80.645 186 26 8 2492 2673 429973435 429973614 4.720000e-28 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G348300 chr1A 533693932 533696646 2714 True 5014.000000 5014 100.000000 1 2715 1 chr1A.!!$R2 2714
1 TraesCS1A01G348300 chr1B 591425908 591428244 2336 True 645.300000 1729 94.131800 3 2715 5 chr1B.!!$R5 2712
2 TraesCS1A01G348300 chr1B 593721487 593722232 745 False 403.500000 459 87.977500 765 1688 2 chr1B.!!$F3 923
3 TraesCS1A01G348300 chr1B 593683508 593684784 1276 False 336.233333 531 89.922667 790 2145 3 chr1B.!!$F2 1355
4 TraesCS1A01G348300 chr1D 436614623 436616827 2204 True 592.500000 856 91.180500 1 2073 4 chr1D.!!$R3 2072

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
126 156 0.828677 GTATGCAGTACCCGGTCCTT 59.171 55.0 0.00 0.0 0.0 3.36 F
690 1035 2.092753 TCCATGGCCTCTTCATCAGAAC 60.093 50.0 6.96 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1288 1642 0.107945 CAAGGTAGCTCTGTCCCTGC 60.108 60.0 0.0 0.0 0.0 4.85 R
2295 3165 0.030603 ACTCCCTCCATTCTCCCTCC 60.031 60.0 0.0 0.0 0.0 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 156 0.828677 GTATGCAGTACCCGGTCCTT 59.171 55.000 0.00 0.00 0.00 3.36
229 432 9.682465 ACATATCATAGATGAGAATGGGAAATG 57.318 33.333 16.23 2.38 40.64 2.32
232 435 3.607490 AGATGAGAATGGGAAATGGGG 57.393 47.619 0.00 0.00 0.00 4.96
241 444 4.642489 ATGGGAAATGGGGGAAAGTAAT 57.358 40.909 0.00 0.00 0.00 1.89
242 445 3.718723 TGGGAAATGGGGGAAAGTAATG 58.281 45.455 0.00 0.00 0.00 1.90
243 446 3.338214 TGGGAAATGGGGGAAAGTAATGA 59.662 43.478 0.00 0.00 0.00 2.57
258 461 7.256835 GGAAAGTAATGATGGATCCTATGACCT 60.257 40.741 14.23 0.00 0.00 3.85
259 462 6.617782 AGTAATGATGGATCCTATGACCTG 57.382 41.667 14.23 0.00 0.00 4.00
268 471 7.540474 TGGATCCTATGACCTGTATAGTTTC 57.460 40.000 14.23 0.00 0.00 2.78
300 503 5.740569 GTGCGTATCGAAGAAGTACATGTAA 59.259 40.000 7.25 0.00 43.58 2.41
315 518 5.514500 ACATGTAAATAACTGTCCCACCT 57.486 39.130 0.00 0.00 0.00 4.00
342 545 8.927675 ATGTTTGAACTTACTTGGGTATGTTA 57.072 30.769 7.19 0.00 42.44 2.41
367 570 4.990543 TGATAAACAAGTTCAGTGAGCG 57.009 40.909 0.92 0.00 0.00 5.03
676 1021 6.488006 AGATTCACATAATTACAGTCCATGGC 59.512 38.462 6.96 2.00 0.00 4.40
679 1024 4.516698 CACATAATTACAGTCCATGGCCTC 59.483 45.833 6.96 0.00 0.00 4.70
690 1035 2.092753 TCCATGGCCTCTTCATCAGAAC 60.093 50.000 6.96 0.00 0.00 3.01
757 1102 2.430332 GACTTCTCTATGCCACAGCTCT 59.570 50.000 0.00 0.00 40.80 4.09
800 1145 3.835395 CTGGTTCCTGAAGAAGTCTAGGT 59.165 47.826 0.00 0.00 34.29 3.08
814 1160 9.628500 AAGAAGTCTAGGTTGAAAATAACTGTT 57.372 29.630 0.00 0.00 0.00 3.16
876 1225 6.547510 GGGAATAAATGTCTGAAGTATTGGCT 59.452 38.462 0.00 0.00 0.00 4.75
877 1226 7.255277 GGGAATAAATGTCTGAAGTATTGGCTC 60.255 40.741 0.00 0.00 0.00 4.70
878 1227 7.255277 GGAATAAATGTCTGAAGTATTGGCTCC 60.255 40.741 0.00 0.00 0.00 4.70
879 1228 4.574674 AATGTCTGAAGTATTGGCTCCA 57.425 40.909 0.00 0.00 0.00 3.86
880 1229 4.574674 ATGTCTGAAGTATTGGCTCCAA 57.425 40.909 3.55 3.55 40.47 3.53
881 1230 3.674997 TGTCTGAAGTATTGGCTCCAAC 58.325 45.455 3.08 0.00 38.88 3.77
882 1231 3.327757 TGTCTGAAGTATTGGCTCCAACT 59.672 43.478 3.08 0.00 38.88 3.16
883 1232 4.202461 TGTCTGAAGTATTGGCTCCAACTT 60.202 41.667 3.08 4.69 38.88 2.66
884 1233 4.393371 GTCTGAAGTATTGGCTCCAACTTC 59.607 45.833 19.32 19.32 40.98 3.01
885 1234 4.287067 TCTGAAGTATTGGCTCCAACTTCT 59.713 41.667 23.39 12.51 41.09 2.85
886 1235 4.579869 TGAAGTATTGGCTCCAACTTCTC 58.420 43.478 23.39 12.23 41.09 2.87
887 1236 4.287067 TGAAGTATTGGCTCCAACTTCTCT 59.713 41.667 23.39 9.48 41.09 3.10
888 1237 5.483937 TGAAGTATTGGCTCCAACTTCTCTA 59.516 40.000 23.39 9.73 41.09 2.43
889 1238 6.156949 TGAAGTATTGGCTCCAACTTCTCTAT 59.843 38.462 23.39 4.46 41.09 1.98
890 1239 5.923204 AGTATTGGCTCCAACTTCTCTATG 58.077 41.667 3.08 0.00 38.88 2.23
891 1240 4.851639 ATTGGCTCCAACTTCTCTATGT 57.148 40.909 3.08 0.00 38.88 2.29
893 1242 4.640771 TGGCTCCAACTTCTCTATGTTT 57.359 40.909 0.00 0.00 0.00 2.83
896 1245 6.721318 TGGCTCCAACTTCTCTATGTTTTAT 58.279 36.000 0.00 0.00 0.00 1.40
951 1300 9.696917 CATAATTTGCTCCAACTTCTTACTTTT 57.303 29.630 0.00 0.00 0.00 2.27
992 1341 3.437049 GGAAATACTGTGTGAGCCAAGAC 59.563 47.826 0.00 0.00 0.00 3.01
1202 1551 8.630091 ACTCCATGGGGTATGTAGTATCTATTA 58.370 37.037 18.16 0.00 34.57 0.98
1220 1569 8.873215 ATCTATTAACATACGAGGTTTGACAG 57.127 34.615 0.00 0.00 0.00 3.51
1236 1586 6.183360 GGTTTGACAGGGAAATGAGTTTGTTA 60.183 38.462 0.00 0.00 0.00 2.41
1281 1635 3.914426 AGAAACCAGGCAGAATACGAT 57.086 42.857 0.00 0.00 0.00 3.73
1282 1636 5.353394 AAGAAACCAGGCAGAATACGATA 57.647 39.130 0.00 0.00 0.00 2.92
1283 1637 5.353394 AGAAACCAGGCAGAATACGATAA 57.647 39.130 0.00 0.00 0.00 1.75
1284 1638 5.116882 AGAAACCAGGCAGAATACGATAAC 58.883 41.667 0.00 0.00 0.00 1.89
1285 1639 4.481368 AACCAGGCAGAATACGATAACA 57.519 40.909 0.00 0.00 0.00 2.41
1286 1640 4.481368 ACCAGGCAGAATACGATAACAA 57.519 40.909 0.00 0.00 0.00 2.83
1287 1641 4.839121 ACCAGGCAGAATACGATAACAAA 58.161 39.130 0.00 0.00 0.00 2.83
1288 1642 4.876107 ACCAGGCAGAATACGATAACAAAG 59.124 41.667 0.00 0.00 0.00 2.77
1289 1643 4.260784 CCAGGCAGAATACGATAACAAAGC 60.261 45.833 0.00 0.00 0.00 3.51
1290 1644 4.332543 CAGGCAGAATACGATAACAAAGCA 59.667 41.667 0.00 0.00 0.00 3.91
1291 1645 4.572389 AGGCAGAATACGATAACAAAGCAG 59.428 41.667 0.00 0.00 0.00 4.24
1292 1646 4.260784 GGCAGAATACGATAACAAAGCAGG 60.261 45.833 0.00 0.00 0.00 4.85
1293 1647 4.260784 GCAGAATACGATAACAAAGCAGGG 60.261 45.833 0.00 0.00 0.00 4.45
1294 1648 5.116180 CAGAATACGATAACAAAGCAGGGA 58.884 41.667 0.00 0.00 0.00 4.20
1295 1649 5.006746 CAGAATACGATAACAAAGCAGGGAC 59.993 44.000 0.00 0.00 0.00 4.46
1296 1650 2.851263 ACGATAACAAAGCAGGGACA 57.149 45.000 0.00 0.00 0.00 4.02
1297 1651 2.699954 ACGATAACAAAGCAGGGACAG 58.300 47.619 0.00 0.00 0.00 3.51
1298 1652 2.301870 ACGATAACAAAGCAGGGACAGA 59.698 45.455 0.00 0.00 0.00 3.41
1299 1653 2.932614 CGATAACAAAGCAGGGACAGAG 59.067 50.000 0.00 0.00 0.00 3.35
1300 1654 2.185004 TAACAAAGCAGGGACAGAGC 57.815 50.000 0.00 0.00 0.00 4.09
1301 1655 0.475906 AACAAAGCAGGGACAGAGCT 59.524 50.000 0.00 0.00 41.03 4.09
1302 1656 1.352083 ACAAAGCAGGGACAGAGCTA 58.648 50.000 0.00 0.00 37.70 3.32
1303 1657 1.002544 ACAAAGCAGGGACAGAGCTAC 59.997 52.381 0.00 0.00 37.70 3.58
1304 1658 0.615850 AAAGCAGGGACAGAGCTACC 59.384 55.000 0.00 0.00 37.70 3.18
1305 1659 0.252467 AAGCAGGGACAGAGCTACCT 60.252 55.000 0.00 0.00 37.70 3.08
1306 1660 0.252467 AGCAGGGACAGAGCTACCTT 60.252 55.000 0.00 0.00 36.73 3.50
1307 1661 0.107945 GCAGGGACAGAGCTACCTTG 60.108 60.000 0.00 0.00 34.60 3.61
1308 1662 1.270907 CAGGGACAGAGCTACCTTGT 58.729 55.000 0.00 0.00 0.00 3.16
1309 1663 2.457598 CAGGGACAGAGCTACCTTGTA 58.542 52.381 0.00 0.00 0.00 2.41
1310 1664 2.832129 CAGGGACAGAGCTACCTTGTAA 59.168 50.000 0.00 0.00 0.00 2.41
1311 1665 3.100671 AGGGACAGAGCTACCTTGTAAG 58.899 50.000 0.00 0.00 0.00 2.34
1312 1666 2.418884 GGGACAGAGCTACCTTGTAAGC 60.419 54.545 0.00 0.00 39.08 3.09
1313 1667 2.233922 GGACAGAGCTACCTTGTAAGCA 59.766 50.000 0.00 0.00 41.32 3.91
1314 1668 3.306780 GGACAGAGCTACCTTGTAAGCAA 60.307 47.826 0.00 0.00 41.32 3.91
1315 1669 4.508662 GACAGAGCTACCTTGTAAGCAAT 58.491 43.478 0.00 0.00 41.32 3.56
1316 1670 4.256920 ACAGAGCTACCTTGTAAGCAATG 58.743 43.478 0.00 0.00 41.32 2.82
1317 1671 3.624861 CAGAGCTACCTTGTAAGCAATGG 59.375 47.826 0.00 0.00 41.32 3.16
1318 1672 2.945668 GAGCTACCTTGTAAGCAATGGG 59.054 50.000 0.00 0.00 41.32 4.00
1319 1673 2.024414 GCTACCTTGTAAGCAATGGGG 58.976 52.381 0.00 0.00 38.63 4.96
1320 1674 2.620627 GCTACCTTGTAAGCAATGGGGT 60.621 50.000 0.00 0.00 38.63 4.95
1321 1675 2.215942 ACCTTGTAAGCAATGGGGTC 57.784 50.000 0.00 0.00 33.65 4.46
1322 1676 1.427368 ACCTTGTAAGCAATGGGGTCA 59.573 47.619 0.00 0.00 33.65 4.02
1323 1677 2.158385 ACCTTGTAAGCAATGGGGTCAA 60.158 45.455 0.00 0.00 33.65 3.18
1324 1678 3.099141 CCTTGTAAGCAATGGGGTCAAT 58.901 45.455 0.00 0.00 33.65 2.57
1325 1679 3.515104 CCTTGTAAGCAATGGGGTCAATT 59.485 43.478 0.00 0.00 33.65 2.32
1326 1680 4.497300 CTTGTAAGCAATGGGGTCAATTG 58.503 43.478 0.00 0.00 33.65 2.32
1327 1681 3.772387 TGTAAGCAATGGGGTCAATTGA 58.228 40.909 3.38 3.38 0.00 2.57
1328 1682 3.509575 TGTAAGCAATGGGGTCAATTGAC 59.490 43.478 27.16 27.16 44.04 3.18
1329 1683 8.727889 CTTGTAAGCAATGGGGTCAATTGACC 62.728 46.154 38.92 38.92 46.89 4.02
1343 1697 6.935167 GTCAATTGACCCCAATGAAATTAGT 58.065 36.000 25.26 0.00 41.84 2.24
1344 1698 8.062065 GTCAATTGACCCCAATGAAATTAGTA 57.938 34.615 25.26 0.00 41.84 1.82
1345 1699 8.527810 GTCAATTGACCCCAATGAAATTAGTAA 58.472 33.333 25.26 0.00 41.84 2.24
1346 1700 9.094578 TCAATTGACCCCAATGAAATTAGTAAA 57.905 29.630 3.38 0.00 41.84 2.01
1347 1701 9.889128 CAATTGACCCCAATGAAATTAGTAAAT 57.111 29.630 0.00 0.00 41.84 1.40
1349 1703 7.654022 TGACCCCAATGAAATTAGTAAATCC 57.346 36.000 0.00 0.00 32.46 3.01
1350 1704 7.418378 TGACCCCAATGAAATTAGTAAATCCT 58.582 34.615 0.00 0.00 32.46 3.24
1351 1705 7.898636 TGACCCCAATGAAATTAGTAAATCCTT 59.101 33.333 0.00 0.00 32.46 3.36
1352 1706 8.306313 ACCCCAATGAAATTAGTAAATCCTTC 57.694 34.615 0.00 0.00 32.46 3.46
1353 1707 7.898636 ACCCCAATGAAATTAGTAAATCCTTCA 59.101 33.333 0.00 0.00 32.46 3.02
1354 1708 8.197439 CCCCAATGAAATTAGTAAATCCTTCAC 58.803 37.037 0.00 0.00 32.46 3.18
1355 1709 8.971073 CCCAATGAAATTAGTAAATCCTTCACT 58.029 33.333 0.00 0.00 32.46 3.41
1396 1750 9.442047 CATTACTCATTTATAGAAGATGACCCC 57.558 37.037 0.00 0.00 0.00 4.95
1397 1751 8.561536 TTACTCATTTATAGAAGATGACCCCA 57.438 34.615 0.00 0.00 0.00 4.96
1398 1752 6.831976 ACTCATTTATAGAAGATGACCCCAC 58.168 40.000 0.00 0.00 0.00 4.61
1399 1753 6.617371 ACTCATTTATAGAAGATGACCCCACT 59.383 38.462 0.00 0.00 0.00 4.00
1400 1754 6.830912 TCATTTATAGAAGATGACCCCACTG 58.169 40.000 0.00 0.00 0.00 3.66
1401 1755 6.386927 TCATTTATAGAAGATGACCCCACTGT 59.613 38.462 0.00 0.00 0.00 3.55
1402 1756 5.871396 TTATAGAAGATGACCCCACTGTC 57.129 43.478 0.00 0.00 35.77 3.51
1409 1763 2.871096 TGACCCCACTGTCATAAACC 57.129 50.000 0.00 0.00 40.22 3.27
1410 1764 2.344592 TGACCCCACTGTCATAAACCT 58.655 47.619 0.00 0.00 40.22 3.50
1411 1765 2.039746 TGACCCCACTGTCATAAACCTG 59.960 50.000 0.00 0.00 40.22 4.00
1412 1766 2.304761 GACCCCACTGTCATAAACCTGA 59.695 50.000 0.00 0.00 35.29 3.86
1413 1767 2.039879 ACCCCACTGTCATAAACCTGAC 59.960 50.000 0.00 0.00 44.70 3.51
1414 1768 2.618045 CCCCACTGTCATAAACCTGACC 60.618 54.545 2.08 0.00 43.99 4.02
1415 1769 2.618045 CCCACTGTCATAAACCTGACCC 60.618 54.545 2.08 0.00 43.99 4.46
1416 1770 2.618045 CCACTGTCATAAACCTGACCCC 60.618 54.545 2.08 0.00 43.99 4.95
1417 1771 2.039746 CACTGTCATAAACCTGACCCCA 59.960 50.000 2.08 0.00 43.99 4.96
1418 1772 2.919602 ACTGTCATAAACCTGACCCCAT 59.080 45.455 2.08 0.00 43.99 4.00
1419 1773 3.054361 ACTGTCATAAACCTGACCCCATC 60.054 47.826 2.08 0.00 43.99 3.51
1420 1774 2.916269 TGTCATAAACCTGACCCCATCA 59.084 45.455 2.08 0.00 43.99 3.07
1421 1775 3.332187 TGTCATAAACCTGACCCCATCAA 59.668 43.478 2.08 0.00 43.99 2.57
1422 1776 4.017591 TGTCATAAACCTGACCCCATCAAT 60.018 41.667 2.08 0.00 43.99 2.57
1423 1777 4.956075 GTCATAAACCTGACCCCATCAATT 59.044 41.667 0.00 0.00 39.72 2.32
1424 1778 5.422012 GTCATAAACCTGACCCCATCAATTT 59.578 40.000 0.00 0.00 39.72 1.82
1425 1779 6.022315 TCATAAACCTGACCCCATCAATTTT 58.978 36.000 0.00 0.00 36.69 1.82
1426 1780 6.500049 TCATAAACCTGACCCCATCAATTTTT 59.500 34.615 0.00 0.00 36.69 1.94
1484 1845 4.039488 TCGGGTTTCTAGTTTTGCTACTGA 59.961 41.667 0.00 0.00 0.00 3.41
1698 2063 1.301677 GCTGCCAAGAAGGAAGGACG 61.302 60.000 0.00 0.00 44.24 4.79
1823 2568 0.535780 TCTGTTGGCCTGCTGAACAG 60.536 55.000 21.30 21.30 45.27 3.16
1833 2578 2.768253 TGCTGAACAGAGGGTACATG 57.232 50.000 5.97 0.00 0.00 3.21
1834 2579 1.977854 TGCTGAACAGAGGGTACATGT 59.022 47.619 2.69 2.69 0.00 3.21
1835 2580 3.169908 TGCTGAACAGAGGGTACATGTA 58.830 45.455 0.08 0.08 0.00 2.29
1836 2581 3.056107 TGCTGAACAGAGGGTACATGTAC 60.056 47.826 25.00 25.00 35.40 2.90
1837 2582 3.195825 GCTGAACAGAGGGTACATGTACT 59.804 47.826 29.89 15.46 36.36 2.73
1838 2583 4.748892 CTGAACAGAGGGTACATGTACTG 58.251 47.826 29.89 23.09 36.36 2.74
1839 2584 4.157246 TGAACAGAGGGTACATGTACTGT 58.843 43.478 29.89 23.65 42.13 3.55
1840 2585 5.326900 TGAACAGAGGGTACATGTACTGTA 58.673 41.667 29.89 13.14 39.39 2.74
1911 2656 4.706842 TCCAGTAGAGCAGAAAGGTTTT 57.293 40.909 0.00 0.00 0.00 2.43
1912 2657 5.818678 TCCAGTAGAGCAGAAAGGTTTTA 57.181 39.130 0.00 0.00 0.00 1.52
1913 2658 6.182507 TCCAGTAGAGCAGAAAGGTTTTAA 57.817 37.500 0.00 0.00 0.00 1.52
2015 2764 3.920231 TGAAGACATGCTGAATAGGCT 57.080 42.857 0.00 0.00 0.00 4.58
2034 2783 2.286294 GCTGCACCATCTTGTTATCGAG 59.714 50.000 0.00 0.00 0.00 4.04
2053 2803 4.058817 CGAGAACAGGCCATCCTTAATAC 58.941 47.826 5.01 0.00 41.93 1.89
2073 2823 1.600164 CCCACTGCGTGTTGATTTGTG 60.600 52.381 7.68 0.00 0.00 3.33
2074 2824 1.065401 CCACTGCGTGTTGATTTGTGT 59.935 47.619 7.68 0.00 0.00 3.72
2076 2826 2.531103 CACTGCGTGTTGATTTGTGTTG 59.469 45.455 1.24 0.00 0.00 3.33
2078 2828 1.135286 TGCGTGTTGATTTGTGTTGCA 60.135 42.857 0.00 0.00 0.00 4.08
2079 2829 1.255084 GCGTGTTGATTTGTGTTGCAC 59.745 47.619 0.00 0.00 34.56 4.57
2080 2830 2.524034 CGTGTTGATTTGTGTTGCACA 58.476 42.857 0.00 0.00 43.02 4.57
2081 2831 3.114809 CGTGTTGATTTGTGTTGCACAT 58.885 40.909 2.65 0.00 44.16 3.21
2082 2832 3.551082 CGTGTTGATTTGTGTTGCACATT 59.449 39.130 2.65 0.00 44.16 2.71
2094 2964 1.610379 GCACATTCCCTGGCCCTTT 60.610 57.895 0.00 0.00 0.00 3.11
2145 3015 8.621532 TCTGCAGTTCTGTTTATTCATTTACT 57.378 30.769 14.67 0.00 0.00 2.24
2146 3016 8.721478 TCTGCAGTTCTGTTTATTCATTTACTC 58.279 33.333 14.67 0.00 0.00 2.59
2147 3017 8.621532 TGCAGTTCTGTTTATTCATTTACTCT 57.378 30.769 1.78 0.00 0.00 3.24
2149 3019 8.178313 GCAGTTCTGTTTATTCATTTACTCTCC 58.822 37.037 1.78 0.00 0.00 3.71
2150 3020 8.669243 CAGTTCTGTTTATTCATTTACTCTCCC 58.331 37.037 0.00 0.00 0.00 4.30
2151 3021 7.829706 AGTTCTGTTTATTCATTTACTCTCCCC 59.170 37.037 0.00 0.00 0.00 4.81
2152 3022 6.659824 TCTGTTTATTCATTTACTCTCCCCC 58.340 40.000 0.00 0.00 0.00 5.40
2153 3023 5.433526 TGTTTATTCATTTACTCTCCCCCG 58.566 41.667 0.00 0.00 0.00 5.73
2154 3024 5.045432 TGTTTATTCATTTACTCTCCCCCGT 60.045 40.000 0.00 0.00 0.00 5.28
2155 3025 5.703730 TTATTCATTTACTCTCCCCCGTT 57.296 39.130 0.00 0.00 0.00 4.44
2156 3026 3.622166 TTCATTTACTCTCCCCCGTTC 57.378 47.619 0.00 0.00 0.00 3.95
2157 3027 1.835531 TCATTTACTCTCCCCCGTTCC 59.164 52.381 0.00 0.00 0.00 3.62
2158 3028 1.838077 CATTTACTCTCCCCCGTTCCT 59.162 52.381 0.00 0.00 0.00 3.36
2159 3029 2.925966 TTTACTCTCCCCCGTTCCTA 57.074 50.000 0.00 0.00 0.00 2.94
2160 3030 2.925966 TTACTCTCCCCCGTTCCTAA 57.074 50.000 0.00 0.00 0.00 2.69
2161 3031 2.925966 TACTCTCCCCCGTTCCTAAA 57.074 50.000 0.00 0.00 0.00 1.85
2162 3032 2.265526 ACTCTCCCCCGTTCCTAAAT 57.734 50.000 0.00 0.00 0.00 1.40
2163 3033 3.409804 ACTCTCCCCCGTTCCTAAATA 57.590 47.619 0.00 0.00 0.00 1.40
2164 3034 3.937751 ACTCTCCCCCGTTCCTAAATAT 58.062 45.455 0.00 0.00 0.00 1.28
2165 3035 5.083953 ACTCTCCCCCGTTCCTAAATATA 57.916 43.478 0.00 0.00 0.00 0.86
2166 3036 5.470501 ACTCTCCCCCGTTCCTAAATATAA 58.529 41.667 0.00 0.00 0.00 0.98
2167 3037 5.543020 ACTCTCCCCCGTTCCTAAATATAAG 59.457 44.000 0.00 0.00 0.00 1.73
2168 3038 5.470501 TCTCCCCCGTTCCTAAATATAAGT 58.529 41.667 0.00 0.00 0.00 2.24
2169 3039 5.541484 TCTCCCCCGTTCCTAAATATAAGTC 59.459 44.000 0.00 0.00 0.00 3.01
2170 3040 5.470501 TCCCCCGTTCCTAAATATAAGTCT 58.529 41.667 0.00 0.00 0.00 3.24
2171 3041 5.907079 TCCCCCGTTCCTAAATATAAGTCTT 59.093 40.000 0.00 0.00 0.00 3.01
2172 3042 6.387807 TCCCCCGTTCCTAAATATAAGTCTTT 59.612 38.462 0.00 0.00 0.00 2.52
2173 3043 6.485648 CCCCCGTTCCTAAATATAAGTCTTTG 59.514 42.308 0.00 0.00 0.00 2.77
2174 3044 7.052248 CCCCGTTCCTAAATATAAGTCTTTGT 58.948 38.462 0.00 0.00 0.00 2.83
2175 3045 8.206189 CCCCGTTCCTAAATATAAGTCTTTGTA 58.794 37.037 0.00 0.00 0.00 2.41
2176 3046 9.257651 CCCGTTCCTAAATATAAGTCTTTGTAG 57.742 37.037 0.00 0.00 0.00 2.74
2188 3058 6.426646 AAGTCTTTGTAGAGATTCCACTGT 57.573 37.500 0.00 0.00 0.00 3.55
2189 3059 5.788450 AGTCTTTGTAGAGATTCCACTGTG 58.212 41.667 0.00 0.00 0.00 3.66
2190 3060 4.932200 GTCTTTGTAGAGATTCCACTGTGG 59.068 45.833 20.86 20.86 39.43 4.17
2191 3061 4.838423 TCTTTGTAGAGATTCCACTGTGGA 59.162 41.667 25.12 25.12 46.61 4.02
2201 3071 2.097036 TCCACTGTGGACTACATACGG 58.903 52.381 25.12 0.00 42.67 4.02
2202 3072 2.097036 CCACTGTGGACTACATACGGA 58.903 52.381 22.33 0.00 40.96 4.69
2203 3073 2.099263 CCACTGTGGACTACATACGGAG 59.901 54.545 22.33 0.00 40.96 4.63
2204 3074 1.749634 ACTGTGGACTACATACGGAGC 59.250 52.381 0.00 0.00 38.92 4.70
2205 3075 1.749063 CTGTGGACTACATACGGAGCA 59.251 52.381 0.00 0.00 38.92 4.26
2206 3076 2.165641 CTGTGGACTACATACGGAGCAA 59.834 50.000 0.00 0.00 38.92 3.91
2207 3077 2.563620 TGTGGACTACATACGGAGCAAA 59.436 45.455 0.00 0.00 33.42 3.68
2208 3078 3.007074 TGTGGACTACATACGGAGCAAAA 59.993 43.478 0.00 0.00 33.42 2.44
2209 3079 4.189231 GTGGACTACATACGGAGCAAAAT 58.811 43.478 0.00 0.00 0.00 1.82
2210 3080 4.034048 GTGGACTACATACGGAGCAAAATG 59.966 45.833 0.00 0.00 0.00 2.32
2211 3081 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
2212 3082 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
2213 3083 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2214 3084 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2215 3085 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2216 3086 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2217 3087 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2218 3088 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2219 3089 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2220 3090 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2221 3091 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2222 3092 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2223 3093 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2236 3106 8.430801 AGTGAATCTACACTCTAAAATGCATC 57.569 34.615 0.00 0.00 46.36 3.91
2237 3107 7.497249 AGTGAATCTACACTCTAAAATGCATCC 59.503 37.037 0.00 0.00 46.36 3.51
2238 3108 7.280876 GTGAATCTACACTCTAAAATGCATCCA 59.719 37.037 0.00 0.00 37.73 3.41
2239 3109 7.280876 TGAATCTACACTCTAAAATGCATCCAC 59.719 37.037 0.00 0.00 0.00 4.02
2240 3110 6.048732 TCTACACTCTAAAATGCATCCACA 57.951 37.500 0.00 0.00 0.00 4.17
2241 3111 6.653020 TCTACACTCTAAAATGCATCCACAT 58.347 36.000 0.00 0.00 0.00 3.21
2242 3112 7.791029 TCTACACTCTAAAATGCATCCACATA 58.209 34.615 0.00 0.00 0.00 2.29
2243 3113 6.683974 ACACTCTAAAATGCATCCACATAC 57.316 37.500 0.00 0.00 0.00 2.39
2244 3114 6.179756 ACACTCTAAAATGCATCCACATACA 58.820 36.000 0.00 0.00 0.00 2.29
2245 3115 6.830324 ACACTCTAAAATGCATCCACATACAT 59.170 34.615 0.00 0.00 0.00 2.29
2246 3116 7.012704 ACACTCTAAAATGCATCCACATACATC 59.987 37.037 0.00 0.00 0.00 3.06
2247 3117 7.228108 CACTCTAAAATGCATCCACATACATCT 59.772 37.037 0.00 0.00 0.00 2.90
2248 3118 7.228108 ACTCTAAAATGCATCCACATACATCTG 59.772 37.037 0.00 0.00 0.00 2.90
2249 3119 4.579454 AAATGCATCCACATACATCTGC 57.421 40.909 0.00 0.00 0.00 4.26
2250 3120 2.713863 TGCATCCACATACATCTGCA 57.286 45.000 0.00 0.00 37.29 4.41
2251 3121 3.217681 TGCATCCACATACATCTGCAT 57.782 42.857 0.00 0.00 34.92 3.96
2252 3122 2.882137 TGCATCCACATACATCTGCATG 59.118 45.455 0.00 0.00 34.92 4.06
2253 3123 2.882761 GCATCCACATACATCTGCATGT 59.117 45.455 0.00 0.00 45.73 3.21
2254 3124 3.317149 GCATCCACATACATCTGCATGTT 59.683 43.478 0.00 0.00 40.66 2.71
2255 3125 4.791734 GCATCCACATACATCTGCATGTTG 60.792 45.833 0.00 0.71 40.66 3.33
2256 3126 3.954200 TCCACATACATCTGCATGTTGT 58.046 40.909 0.00 0.18 40.66 3.32
2257 3127 3.940852 TCCACATACATCTGCATGTTGTC 59.059 43.478 0.00 0.00 40.66 3.18
2258 3128 3.065786 CCACATACATCTGCATGTTGTCC 59.934 47.826 0.00 0.00 40.66 4.02
2259 3129 3.690628 CACATACATCTGCATGTTGTCCA 59.309 43.478 0.00 0.00 40.66 4.02
2260 3130 4.337274 CACATACATCTGCATGTTGTCCAT 59.663 41.667 0.00 0.00 40.66 3.41
2261 3131 5.528320 CACATACATCTGCATGTTGTCCATA 59.472 40.000 0.00 0.00 40.66 2.74
2262 3132 5.761726 ACATACATCTGCATGTTGTCCATAG 59.238 40.000 0.00 0.00 40.66 2.23
2263 3133 2.947652 ACATCTGCATGTTGTCCATAGC 59.052 45.455 0.00 0.00 40.66 2.97
2264 3134 1.655484 TCTGCATGTTGTCCATAGCG 58.345 50.000 0.00 0.00 33.17 4.26
2265 3135 1.206849 TCTGCATGTTGTCCATAGCGA 59.793 47.619 0.00 0.00 33.17 4.93
2266 3136 2.009051 CTGCATGTTGTCCATAGCGAA 58.991 47.619 0.00 0.00 33.17 4.70
2267 3137 2.615447 CTGCATGTTGTCCATAGCGAAT 59.385 45.455 0.00 0.00 33.17 3.34
2268 3138 3.016031 TGCATGTTGTCCATAGCGAATT 58.984 40.909 0.00 0.00 33.17 2.17
2269 3139 3.065233 TGCATGTTGTCCATAGCGAATTC 59.935 43.478 0.00 0.00 33.17 2.17
2270 3140 3.313526 GCATGTTGTCCATAGCGAATTCT 59.686 43.478 3.52 0.00 30.71 2.40
2271 3141 4.553547 GCATGTTGTCCATAGCGAATTCTC 60.554 45.833 3.52 0.00 30.71 2.87
2272 3142 4.471904 TGTTGTCCATAGCGAATTCTCT 57.528 40.909 3.04 3.04 0.00 3.10
2273 3143 5.592104 TGTTGTCCATAGCGAATTCTCTA 57.408 39.130 7.58 7.58 0.00 2.43
2274 3144 5.348986 TGTTGTCCATAGCGAATTCTCTAC 58.651 41.667 7.30 0.00 0.00 2.59
2275 3145 5.105513 TGTTGTCCATAGCGAATTCTCTACA 60.106 40.000 7.30 1.43 0.00 2.74
2276 3146 5.592104 TGTCCATAGCGAATTCTCTACAA 57.408 39.130 7.30 0.00 0.00 2.41
2277 3147 5.972935 TGTCCATAGCGAATTCTCTACAAA 58.027 37.500 7.30 0.00 0.00 2.83
2278 3148 6.042777 TGTCCATAGCGAATTCTCTACAAAG 58.957 40.000 7.30 0.00 0.00 2.77
2279 3149 6.127451 TGTCCATAGCGAATTCTCTACAAAGA 60.127 38.462 7.30 0.61 0.00 2.52
2280 3150 6.199342 GTCCATAGCGAATTCTCTACAAAGAC 59.801 42.308 7.30 8.24 0.00 3.01
2281 3151 6.096987 TCCATAGCGAATTCTCTACAAAGACT 59.903 38.462 7.30 0.00 0.00 3.24
2282 3152 6.758886 CCATAGCGAATTCTCTACAAAGACTT 59.241 38.462 7.30 0.00 0.00 3.01
2283 3153 7.921214 CCATAGCGAATTCTCTACAAAGACTTA 59.079 37.037 7.30 0.00 0.00 2.24
2284 3154 9.469807 CATAGCGAATTCTCTACAAAGACTTAT 57.530 33.333 7.30 0.00 0.00 1.73
2299 3169 9.853177 ACAAAGACTTATATTTAGGAATGGAGG 57.147 33.333 0.00 0.00 0.00 4.30
2300 3170 9.289782 CAAAGACTTATATTTAGGAATGGAGGG 57.710 37.037 0.00 0.00 0.00 4.30
2301 3171 8.814448 AAGACTTATATTTAGGAATGGAGGGA 57.186 34.615 0.00 0.00 0.00 4.20
2302 3172 8.442660 AGACTTATATTTAGGAATGGAGGGAG 57.557 38.462 0.00 0.00 0.00 4.30
2303 3173 8.242325 AGACTTATATTTAGGAATGGAGGGAGA 58.758 37.037 0.00 0.00 0.00 3.71
2304 3174 8.814448 ACTTATATTTAGGAATGGAGGGAGAA 57.186 34.615 0.00 0.00 0.00 2.87
2305 3175 9.411848 ACTTATATTTAGGAATGGAGGGAGAAT 57.588 33.333 0.00 0.00 0.00 2.40
2306 3176 9.678260 CTTATATTTAGGAATGGAGGGAGAATG 57.322 37.037 0.00 0.00 0.00 2.67
2307 3177 4.796110 TTTAGGAATGGAGGGAGAATGG 57.204 45.455 0.00 0.00 0.00 3.16
2308 3178 2.594536 AGGAATGGAGGGAGAATGGA 57.405 50.000 0.00 0.00 0.00 3.41
2309 3179 2.416638 AGGAATGGAGGGAGAATGGAG 58.583 52.381 0.00 0.00 0.00 3.86
2310 3180 1.423161 GGAATGGAGGGAGAATGGAGG 59.577 57.143 0.00 0.00 0.00 4.30
2311 3181 1.423161 GAATGGAGGGAGAATGGAGGG 59.577 57.143 0.00 0.00 0.00 4.30
2312 3182 0.649992 ATGGAGGGAGAATGGAGGGA 59.350 55.000 0.00 0.00 0.00 4.20
2313 3183 0.030705 TGGAGGGAGAATGGAGGGAG 60.031 60.000 0.00 0.00 0.00 4.30
2314 3184 0.030603 GGAGGGAGAATGGAGGGAGT 60.031 60.000 0.00 0.00 0.00 3.85
2315 3185 1.220750 GGAGGGAGAATGGAGGGAGTA 59.779 57.143 0.00 0.00 0.00 2.59
2316 3186 2.321719 GAGGGAGAATGGAGGGAGTAC 58.678 57.143 0.00 0.00 0.00 2.73
2317 3187 1.651770 AGGGAGAATGGAGGGAGTACA 59.348 52.381 0.00 0.00 0.00 2.90
2318 3188 2.251338 AGGGAGAATGGAGGGAGTACAT 59.749 50.000 0.00 0.00 0.00 2.29
2319 3189 2.635427 GGGAGAATGGAGGGAGTACATC 59.365 54.545 0.00 0.00 0.00 3.06
2332 3202 3.019564 GAGTACATCCTTTTGCATGCCT 58.980 45.455 16.68 0.00 0.00 4.75
2358 3228 4.647424 TTGTAACCCTGCTGTTTTGAAG 57.353 40.909 0.00 0.00 0.00 3.02
2413 3283 5.279384 CAGCCAGATTATTGATCAAACTGC 58.721 41.667 13.09 13.72 37.22 4.40
2464 3334 2.739932 CGATCTTCTCCAGGCATCGTTT 60.740 50.000 0.00 0.00 33.29 3.60
2465 3335 2.099141 TCTTCTCCAGGCATCGTTTG 57.901 50.000 0.00 0.00 0.00 2.93
2494 3364 7.328493 GGTATGGCTGATTTGAAAACAAGTTAC 59.672 37.037 0.00 0.00 0.00 2.50
2496 3366 6.503524 TGGCTGATTTGAAAACAAGTTACTC 58.496 36.000 0.00 0.00 0.00 2.59
2497 3367 5.920840 GGCTGATTTGAAAACAAGTTACTCC 59.079 40.000 0.00 0.00 0.00 3.85
2498 3368 5.920840 GCTGATTTGAAAACAAGTTACTCCC 59.079 40.000 0.00 0.00 0.00 4.30
2500 3370 7.272037 TGATTTGAAAACAAGTTACTCCCTC 57.728 36.000 0.00 0.00 0.00 4.30
2501 3371 6.264518 TGATTTGAAAACAAGTTACTCCCTCC 59.735 38.462 0.00 0.00 0.00 4.30
2502 3372 3.735591 TGAAAACAAGTTACTCCCTCCG 58.264 45.455 0.00 0.00 0.00 4.63
2503 3373 3.135167 TGAAAACAAGTTACTCCCTCCGT 59.865 43.478 0.00 0.00 0.00 4.69
2504 3374 3.397849 AAACAAGTTACTCCCTCCGTC 57.602 47.619 0.00 0.00 0.00 4.79
2505 3375 1.264295 ACAAGTTACTCCCTCCGTCC 58.736 55.000 0.00 0.00 0.00 4.79
2506 3376 0.535797 CAAGTTACTCCCTCCGTCCC 59.464 60.000 0.00 0.00 0.00 4.46
2507 3377 0.115745 AAGTTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
2508 3378 0.338814 AGTTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
2509 3379 1.572415 AGTTACTCCCTCCGTCCCATA 59.428 52.381 0.00 0.00 0.00 2.74
2510 3380 2.023695 AGTTACTCCCTCCGTCCCATAA 60.024 50.000 0.00 0.00 0.00 1.90
2511 3381 2.970640 GTTACTCCCTCCGTCCCATAAT 59.029 50.000 0.00 0.00 0.00 1.28
2512 3382 4.140853 AGTTACTCCCTCCGTCCCATAATA 60.141 45.833 0.00 0.00 0.00 0.98
2513 3383 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2514 3384 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2515 3385 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2516 3386 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2517 3387 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2518 3388 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
2519 3389 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
2520 3390 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
2521 3391 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
2522 3392 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
2523 3393 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
2524 3394 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
2525 3395 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
2526 3396 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
2527 3397 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
2528 3398 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
2529 3399 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
2530 3400 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
2537 3407 8.876275 ATAAGAACGTTTTTGACACTAGTGTA 57.124 30.769 27.98 11.50 45.05 2.90
2538 3408 6.823678 AGAACGTTTTTGACACTAGTGTAG 57.176 37.500 27.98 14.79 45.05 2.74
2539 3409 6.335777 AGAACGTTTTTGACACTAGTGTAGT 58.664 36.000 27.98 15.35 45.05 2.73
2572 3442 6.561519 ATTCTTATATTATGGGACGGAGGG 57.438 41.667 0.00 0.00 0.00 4.30
2573 3443 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
2574 3444 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2575 3445 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
2576 3446 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
2577 3447 2.376695 TTATGGGACGGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
2578 3448 1.229131 TATGGGACGGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
2579 3449 1.229131 ATGGGACGGAGGGAGTAGTA 58.771 55.000 0.00 0.00 0.00 1.82
2580 3450 1.002069 TGGGACGGAGGGAGTAGTAA 58.998 55.000 0.00 0.00 0.00 2.24
2581 3451 1.358787 TGGGACGGAGGGAGTAGTAAA 59.641 52.381 0.00 0.00 0.00 2.01
2582 3452 2.023695 TGGGACGGAGGGAGTAGTAAAT 60.024 50.000 0.00 0.00 0.00 1.40
2583 3453 3.205056 TGGGACGGAGGGAGTAGTAAATA 59.795 47.826 0.00 0.00 0.00 1.40
2584 3454 3.825585 GGGACGGAGGGAGTAGTAAATAG 59.174 52.174 0.00 0.00 0.00 1.73
2585 3455 4.468713 GGACGGAGGGAGTAGTAAATAGT 58.531 47.826 0.00 0.00 0.00 2.12
2586 3456 5.456763 GGGACGGAGGGAGTAGTAAATAGTA 60.457 48.000 0.00 0.00 0.00 1.82
2587 3457 5.471797 GGACGGAGGGAGTAGTAAATAGTAC 59.528 48.000 0.00 0.00 33.35 2.73
2588 3458 6.259346 ACGGAGGGAGTAGTAAATAGTACT 57.741 41.667 0.00 0.00 43.25 2.73
2595 3465 6.799926 GAGTAGTAAATAGTACTCCCTCCG 57.200 45.833 18.56 0.00 46.32 4.63
2596 3466 6.259346 AGTAGTAAATAGTACTCCCTCCGT 57.741 41.667 0.00 0.00 37.81 4.69
2597 3467 7.380423 AGTAGTAAATAGTACTCCCTCCGTA 57.620 40.000 0.00 0.00 37.81 4.02
2598 3468 7.806180 AGTAGTAAATAGTACTCCCTCCGTAA 58.194 38.462 0.00 0.00 37.81 3.18
2599 3469 8.275040 AGTAGTAAATAGTACTCCCTCCGTAAA 58.725 37.037 0.00 0.00 37.81 2.01
2600 3470 7.579761 AGTAAATAGTACTCCCTCCGTAAAG 57.420 40.000 0.00 0.00 0.00 1.85
2601 3471 7.349598 AGTAAATAGTACTCCCTCCGTAAAGA 58.650 38.462 0.00 0.00 0.00 2.52
2602 3472 7.836183 AGTAAATAGTACTCCCTCCGTAAAGAA 59.164 37.037 0.00 0.00 0.00 2.52
2603 3473 7.486407 AAATAGTACTCCCTCCGTAAAGAAA 57.514 36.000 0.00 0.00 0.00 2.52
2604 3474 7.672122 AATAGTACTCCCTCCGTAAAGAAAT 57.328 36.000 0.00 0.00 0.00 2.17
2605 3475 8.773033 AATAGTACTCCCTCCGTAAAGAAATA 57.227 34.615 0.00 0.00 0.00 1.40
2606 3476 8.953223 ATAGTACTCCCTCCGTAAAGAAATAT 57.047 34.615 0.00 0.00 0.00 1.28
2608 3478 8.773033 AGTACTCCCTCCGTAAAGAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
2609 3479 8.858094 AGTACTCCCTCCGTAAAGAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
2610 3480 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
2611 3481 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
2612 3482 7.564292 ACTCCCTCCGTAAAGAAATATAAGAGT 59.436 37.037 0.00 0.00 0.00 3.24
2613 3483 7.723324 TCCCTCCGTAAAGAAATATAAGAGTG 58.277 38.462 0.00 0.00 0.00 3.51
2614 3484 7.343833 TCCCTCCGTAAAGAAATATAAGAGTGT 59.656 37.037 0.00 0.00 0.00 3.55
2615 3485 7.985752 CCCTCCGTAAAGAAATATAAGAGTGTT 59.014 37.037 0.00 0.00 0.00 3.32
2616 3486 9.379791 CCTCCGTAAAGAAATATAAGAGTGTTT 57.620 33.333 0.00 0.00 0.00 2.83
2664 3534 8.943909 AACACTCTTATATTTCTTTACGGAGG 57.056 34.615 0.00 0.00 0.00 4.30
2665 3535 7.498443 ACACTCTTATATTTCTTTACGGAGGG 58.502 38.462 0.00 0.00 0.00 4.30
2704 3574 4.022068 TGCAGGCAGAAAATAGTTGGAAAG 60.022 41.667 0.00 0.00 0.00 2.62
2710 3580 7.874528 AGGCAGAAAATAGTTGGAAAGAAATTG 59.125 33.333 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 4.156556 TGTGATCTGCTTGCTAATTCAACC 59.843 41.667 0.00 0.00 0.00 3.77
90 94 3.988517 GCATACTACTGAATTAGCCGTCC 59.011 47.826 0.00 0.00 0.00 4.79
101 131 2.304092 CCGGGTACTGCATACTACTGA 58.696 52.381 0.00 0.00 33.87 3.41
157 188 6.883756 TGGATATGTGCTCATTTGTTTAGTGA 59.116 34.615 6.57 0.00 35.70 3.41
229 432 3.399305 AGGATCCATCATTACTTTCCCCC 59.601 47.826 15.82 0.00 0.00 5.40
232 435 6.881602 GGTCATAGGATCCATCATTACTTTCC 59.118 42.308 15.82 0.00 0.00 3.13
241 444 6.805150 ACTATACAGGTCATAGGATCCATCA 58.195 40.000 15.82 0.00 31.44 3.07
242 445 7.726033 AACTATACAGGTCATAGGATCCATC 57.274 40.000 15.82 0.00 31.44 3.51
243 446 7.958583 AGAAACTATACAGGTCATAGGATCCAT 59.041 37.037 15.82 2.53 31.44 3.41
258 461 5.720202 ACGCACATCAAGAGAAACTATACA 58.280 37.500 0.00 0.00 0.00 2.29
259 462 7.149112 CGATACGCACATCAAGAGAAACTATAC 60.149 40.741 0.00 0.00 0.00 1.47
268 471 3.695816 TCTTCGATACGCACATCAAGAG 58.304 45.455 0.00 0.00 0.00 2.85
300 503 4.657814 AACATCAGGTGGGACAGTTATT 57.342 40.909 0.00 0.00 41.80 1.40
306 509 2.174639 AGTTCAAACATCAGGTGGGACA 59.825 45.455 0.00 0.00 0.00 4.02
315 518 7.001674 ACATACCCAAGTAAGTTCAAACATCA 58.998 34.615 0.00 0.00 25.83 3.07
342 545 6.857964 CGCTCACTGAACTTGTTTATCAAATT 59.142 34.615 0.00 0.00 35.48 1.82
352 555 0.461870 TGTGCGCTCACTGAACTTGT 60.462 50.000 9.73 0.00 43.49 3.16
359 562 1.220529 TTCTCTTTGTGCGCTCACTG 58.779 50.000 12.40 8.00 43.49 3.66
367 570 7.483059 GCTTACACTCATAATTTCTCTTTGTGC 59.517 37.037 0.00 0.00 0.00 4.57
508 712 4.846779 TGTGAAGGCATTACAAGGTTTC 57.153 40.909 0.00 0.00 0.00 2.78
511 715 2.890945 GGTTGTGAAGGCATTACAAGGT 59.109 45.455 0.00 0.00 35.24 3.50
750 1095 2.310779 TCTCTACCCACAAGAGCTGT 57.689 50.000 0.00 0.00 40.30 4.40
757 1102 5.305585 CAGTTTAAGCTTCTCTACCCACAA 58.694 41.667 0.00 0.00 0.00 3.33
992 1341 3.439857 TCCCCTTGTTCATCTTTGAGG 57.560 47.619 0.00 0.00 32.27 3.86
1202 1551 2.635915 TCCCTGTCAAACCTCGTATGTT 59.364 45.455 0.00 0.00 0.00 2.71
1220 1569 7.214467 TGAGAATGTAACAAACTCATTTCCC 57.786 36.000 0.00 0.00 33.57 3.97
1269 1623 4.260784 CCTGCTTTGTTATCGTATTCTGCC 60.261 45.833 0.00 0.00 0.00 4.85
1281 1635 1.699634 AGCTCTGTCCCTGCTTTGTTA 59.300 47.619 0.00 0.00 32.61 2.41
1282 1636 0.475906 AGCTCTGTCCCTGCTTTGTT 59.524 50.000 0.00 0.00 32.61 2.83
1283 1637 1.002544 GTAGCTCTGTCCCTGCTTTGT 59.997 52.381 0.00 0.00 38.15 2.83
1284 1638 1.677217 GGTAGCTCTGTCCCTGCTTTG 60.677 57.143 0.00 0.00 38.15 2.77
1285 1639 0.615850 GGTAGCTCTGTCCCTGCTTT 59.384 55.000 0.00 0.00 38.15 3.51
1286 1640 0.252467 AGGTAGCTCTGTCCCTGCTT 60.252 55.000 0.00 0.00 38.15 3.91
1287 1641 0.252467 AAGGTAGCTCTGTCCCTGCT 60.252 55.000 0.00 0.00 40.43 4.24
1288 1642 0.107945 CAAGGTAGCTCTGTCCCTGC 60.108 60.000 0.00 0.00 0.00 4.85
1289 1643 1.270907 ACAAGGTAGCTCTGTCCCTG 58.729 55.000 0.00 0.00 0.00 4.45
1290 1644 2.921834 TACAAGGTAGCTCTGTCCCT 57.078 50.000 11.35 0.00 0.00 4.20
1291 1645 2.418884 GCTTACAAGGTAGCTCTGTCCC 60.419 54.545 11.35 0.00 34.57 4.46
1292 1646 2.233922 TGCTTACAAGGTAGCTCTGTCC 59.766 50.000 11.35 0.00 38.22 4.02
1293 1647 3.594603 TGCTTACAAGGTAGCTCTGTC 57.405 47.619 11.35 2.19 38.22 3.51
1294 1648 4.256920 CATTGCTTACAAGGTAGCTCTGT 58.743 43.478 12.27 12.27 39.69 3.41
1295 1649 3.624861 CCATTGCTTACAAGGTAGCTCTG 59.375 47.826 0.00 0.00 39.69 3.35
1296 1650 3.370953 CCCATTGCTTACAAGGTAGCTCT 60.371 47.826 0.00 0.00 39.69 4.09
1297 1651 2.945668 CCCATTGCTTACAAGGTAGCTC 59.054 50.000 0.00 0.00 39.69 4.09
1298 1652 2.357154 CCCCATTGCTTACAAGGTAGCT 60.357 50.000 0.00 0.00 39.69 3.32
1299 1653 2.024414 CCCCATTGCTTACAAGGTAGC 58.976 52.381 0.00 0.00 39.69 3.58
1300 1654 3.279434 GACCCCATTGCTTACAAGGTAG 58.721 50.000 0.00 0.00 39.69 3.18
1301 1655 2.645297 TGACCCCATTGCTTACAAGGTA 59.355 45.455 0.00 0.00 39.69 3.08
1302 1656 1.427368 TGACCCCATTGCTTACAAGGT 59.573 47.619 0.00 0.00 39.69 3.50
1303 1657 2.214376 TGACCCCATTGCTTACAAGG 57.786 50.000 0.00 0.00 39.69 3.61
1304 1658 4.220382 TCAATTGACCCCATTGCTTACAAG 59.780 41.667 3.38 0.00 39.69 3.16
1305 1659 4.021544 GTCAATTGACCCCATTGCTTACAA 60.022 41.667 25.26 0.00 39.07 2.41
1306 1660 3.509575 GTCAATTGACCCCATTGCTTACA 59.490 43.478 25.26 0.00 39.07 2.41
1307 1661 4.110036 GTCAATTGACCCCATTGCTTAC 57.890 45.455 25.26 0.00 39.07 2.34
1319 1673 6.935167 ACTAATTTCATTGGGGTCAATTGAC 58.065 36.000 27.16 27.16 41.29 3.18
1320 1674 8.657387 TTACTAATTTCATTGGGGTCAATTGA 57.343 30.769 3.38 3.38 41.29 2.57
1321 1675 9.889128 ATTTACTAATTTCATTGGGGTCAATTG 57.111 29.630 0.00 0.00 41.29 2.32
1323 1677 8.704668 GGATTTACTAATTTCATTGGGGTCAAT 58.295 33.333 0.00 0.00 43.79 2.57
1324 1678 7.898636 AGGATTTACTAATTTCATTGGGGTCAA 59.101 33.333 0.00 0.00 37.28 3.18
1325 1679 7.418378 AGGATTTACTAATTTCATTGGGGTCA 58.582 34.615 0.00 0.00 0.00 4.02
1326 1680 7.898014 AGGATTTACTAATTTCATTGGGGTC 57.102 36.000 0.00 0.00 0.00 4.46
1327 1681 7.898636 TGAAGGATTTACTAATTTCATTGGGGT 59.101 33.333 0.00 0.00 0.00 4.95
1328 1682 8.197439 GTGAAGGATTTACTAATTTCATTGGGG 58.803 37.037 0.00 0.00 31.06 4.96
1329 1683 8.971073 AGTGAAGGATTTACTAATTTCATTGGG 58.029 33.333 0.00 0.00 43.67 4.12
1370 1724 9.442047 GGGGTCATCTTCTATAAATGAGTAATG 57.558 37.037 0.00 0.00 30.43 1.90
1371 1725 9.170890 TGGGGTCATCTTCTATAAATGAGTAAT 57.829 33.333 0.00 0.00 30.43 1.89
1372 1726 8.429641 GTGGGGTCATCTTCTATAAATGAGTAA 58.570 37.037 0.00 0.00 30.43 2.24
1373 1727 7.789831 AGTGGGGTCATCTTCTATAAATGAGTA 59.210 37.037 0.00 0.00 30.43 2.59
1374 1728 6.617371 AGTGGGGTCATCTTCTATAAATGAGT 59.383 38.462 0.00 0.00 30.43 3.41
1375 1729 6.933521 CAGTGGGGTCATCTTCTATAAATGAG 59.066 42.308 0.00 0.00 30.43 2.90
1376 1730 6.386927 ACAGTGGGGTCATCTTCTATAAATGA 59.613 38.462 0.00 0.00 0.00 2.57
1377 1731 6.595682 ACAGTGGGGTCATCTTCTATAAATG 58.404 40.000 0.00 0.00 0.00 2.32
1378 1732 6.386927 TGACAGTGGGGTCATCTTCTATAAAT 59.613 38.462 0.00 0.00 42.56 1.40
1379 1733 5.724370 TGACAGTGGGGTCATCTTCTATAAA 59.276 40.000 0.00 0.00 42.56 1.40
1380 1734 5.277250 TGACAGTGGGGTCATCTTCTATAA 58.723 41.667 0.00 0.00 42.56 0.98
1381 1735 4.878968 TGACAGTGGGGTCATCTTCTATA 58.121 43.478 0.00 0.00 42.56 1.31
1382 1736 3.724478 TGACAGTGGGGTCATCTTCTAT 58.276 45.455 0.00 0.00 42.56 1.98
1383 1737 3.184382 TGACAGTGGGGTCATCTTCTA 57.816 47.619 0.00 0.00 42.56 2.10
1384 1738 2.030027 TGACAGTGGGGTCATCTTCT 57.970 50.000 0.00 0.00 42.56 2.85
1391 1745 2.304761 TCAGGTTTATGACAGTGGGGTC 59.695 50.000 0.00 0.00 38.29 4.46
1392 1746 2.344592 TCAGGTTTATGACAGTGGGGT 58.655 47.619 0.00 0.00 0.00 4.95
1401 1755 4.879295 ATTGATGGGGTCAGGTTTATGA 57.121 40.909 0.00 0.00 38.29 2.15
1402 1756 5.937975 AAATTGATGGGGTCAGGTTTATG 57.062 39.130 0.00 0.00 38.29 1.90
1403 1757 6.950860 AAAAATTGATGGGGTCAGGTTTAT 57.049 33.333 0.00 0.00 38.29 1.40
1424 1778 3.764237 ACAGGGACGAAGCTAGAAAAA 57.236 42.857 0.00 0.00 0.00 1.94
1425 1779 4.039488 TGTTACAGGGACGAAGCTAGAAAA 59.961 41.667 0.00 0.00 0.00 2.29
1426 1780 3.575256 TGTTACAGGGACGAAGCTAGAAA 59.425 43.478 0.00 0.00 0.00 2.52
1427 1781 3.159472 TGTTACAGGGACGAAGCTAGAA 58.841 45.455 0.00 0.00 0.00 2.10
1428 1782 2.799017 TGTTACAGGGACGAAGCTAGA 58.201 47.619 0.00 0.00 0.00 2.43
1429 1783 3.587797 TTGTTACAGGGACGAAGCTAG 57.412 47.619 0.00 0.00 0.00 3.42
1430 1784 3.322828 ACTTTGTTACAGGGACGAAGCTA 59.677 43.478 0.00 0.00 40.59 3.32
1431 1785 2.104281 ACTTTGTTACAGGGACGAAGCT 59.896 45.455 0.00 0.00 40.59 3.74
1432 1786 2.490991 ACTTTGTTACAGGGACGAAGC 58.509 47.619 0.00 0.00 40.59 3.86
1433 1787 7.095270 ACTTATACTTTGTTACAGGGACGAAG 58.905 38.462 0.00 3.35 41.96 3.79
1434 1788 6.996509 ACTTATACTTTGTTACAGGGACGAA 58.003 36.000 0.00 0.00 0.00 3.85
1435 1789 6.594788 ACTTATACTTTGTTACAGGGACGA 57.405 37.500 0.00 0.00 0.00 4.20
1436 1790 8.937634 ATAACTTATACTTTGTTACAGGGACG 57.062 34.615 0.00 0.00 0.00 4.79
1437 1791 9.028185 CGATAACTTATACTTTGTTACAGGGAC 57.972 37.037 0.00 0.00 0.00 4.46
1438 1792 8.199449 CCGATAACTTATACTTTGTTACAGGGA 58.801 37.037 0.00 0.00 0.00 4.20
1439 1793 7.440255 CCCGATAACTTATACTTTGTTACAGGG 59.560 40.741 0.00 0.00 38.53 4.45
1440 1794 7.983484 ACCCGATAACTTATACTTTGTTACAGG 59.017 37.037 0.00 0.00 0.00 4.00
1441 1795 8.937634 ACCCGATAACTTATACTTTGTTACAG 57.062 34.615 0.00 0.00 0.00 2.74
1442 1796 9.723601 AAACCCGATAACTTATACTTTGTTACA 57.276 29.630 0.00 0.00 0.00 2.41
1698 2063 9.525409 AATGAATTGTTTATAGAATGCTTGCTC 57.475 29.630 0.00 0.00 0.00 4.26
1828 2573 7.214381 AGAAGTGCAAAAGTACAGTACATGTA 58.786 34.615 13.37 0.08 43.66 2.29
1829 2574 6.055588 AGAAGTGCAAAAGTACAGTACATGT 58.944 36.000 13.37 2.69 46.45 3.21
1830 2575 6.545504 AGAAGTGCAAAAGTACAGTACATG 57.454 37.500 13.37 9.56 0.00 3.21
1831 2576 7.499232 AGAAAGAAGTGCAAAAGTACAGTACAT 59.501 33.333 13.37 0.00 0.00 2.29
1832 2577 6.821665 AGAAAGAAGTGCAAAAGTACAGTACA 59.178 34.615 13.37 0.00 0.00 2.90
1833 2578 7.247929 AGAAAGAAGTGCAAAAGTACAGTAC 57.752 36.000 2.05 2.05 0.00 2.73
1834 2579 7.551262 TGAAGAAAGAAGTGCAAAAGTACAGTA 59.449 33.333 0.00 0.00 0.00 2.74
1835 2580 6.374333 TGAAGAAAGAAGTGCAAAAGTACAGT 59.626 34.615 0.00 0.00 0.00 3.55
1836 2581 6.785191 TGAAGAAAGAAGTGCAAAAGTACAG 58.215 36.000 0.00 0.00 0.00 2.74
1837 2582 6.597672 TCTGAAGAAAGAAGTGCAAAAGTACA 59.402 34.615 0.00 0.00 0.00 2.90
1838 2583 7.016361 TCTGAAGAAAGAAGTGCAAAAGTAC 57.984 36.000 0.00 0.00 0.00 2.73
1839 2584 7.807977 ATCTGAAGAAAGAAGTGCAAAAGTA 57.192 32.000 0.00 0.00 0.00 2.24
1840 2585 6.705863 ATCTGAAGAAAGAAGTGCAAAAGT 57.294 33.333 0.00 0.00 0.00 2.66
1841 2586 9.125906 CATTATCTGAAGAAAGAAGTGCAAAAG 57.874 33.333 0.00 0.00 0.00 2.27
1842 2587 8.632679 ACATTATCTGAAGAAAGAAGTGCAAAA 58.367 29.630 0.00 0.00 0.00 2.44
1843 2588 8.077991 CACATTATCTGAAGAAAGAAGTGCAAA 58.922 33.333 0.00 0.00 0.00 3.68
1844 2589 7.587629 CACATTATCTGAAGAAAGAAGTGCAA 58.412 34.615 0.00 0.00 0.00 4.08
1845 2590 6.348786 GCACATTATCTGAAGAAAGAAGTGCA 60.349 38.462 16.45 0.00 40.53 4.57
1846 2591 6.026513 GCACATTATCTGAAGAAAGAAGTGC 58.973 40.000 0.00 0.00 37.48 4.40
1847 2592 7.333921 AGAGCACATTATCTGAAGAAAGAAGTG 59.666 37.037 0.00 0.00 0.00 3.16
1848 2593 7.333921 CAGAGCACATTATCTGAAGAAAGAAGT 59.666 37.037 0.00 0.00 44.68 3.01
2015 2764 3.885724 TCTCGATAACAAGATGGTGCA 57.114 42.857 0.00 0.00 0.00 4.57
2034 2783 3.117663 TGGGTATTAAGGATGGCCTGTTC 60.118 47.826 3.32 0.00 46.28 3.18
2073 2823 2.649129 GGGCCAGGGAATGTGCAAC 61.649 63.158 4.39 0.00 37.35 4.17
2074 2824 2.283821 GGGCCAGGGAATGTGCAA 60.284 61.111 4.39 0.00 0.00 4.08
2076 2826 1.194121 AAAAGGGCCAGGGAATGTGC 61.194 55.000 6.18 0.00 0.00 4.57
2078 2828 0.611896 CGAAAAGGGCCAGGGAATGT 60.612 55.000 6.18 0.00 0.00 2.71
2079 2829 1.948721 GCGAAAAGGGCCAGGGAATG 61.949 60.000 6.18 0.00 0.00 2.67
2080 2830 1.682344 GCGAAAAGGGCCAGGGAAT 60.682 57.895 6.18 0.00 0.00 3.01
2081 2831 2.282887 GCGAAAAGGGCCAGGGAA 60.283 61.111 6.18 0.00 0.00 3.97
2082 2832 3.256960 AGCGAAAAGGGCCAGGGA 61.257 61.111 6.18 0.00 0.00 4.20
2094 2964 1.401552 GCATGAAATACTGCCAGCGAA 59.598 47.619 0.00 0.00 32.15 4.70
2145 3015 5.470501 ACTTATATTTAGGAACGGGGGAGA 58.529 41.667 0.00 0.00 0.00 3.71
2146 3016 5.543020 AGACTTATATTTAGGAACGGGGGAG 59.457 44.000 0.00 0.00 0.00 4.30
2147 3017 5.470501 AGACTTATATTTAGGAACGGGGGA 58.529 41.667 0.00 0.00 0.00 4.81
2149 3019 7.052248 ACAAAGACTTATATTTAGGAACGGGG 58.948 38.462 0.00 0.00 0.00 5.73
2150 3020 9.257651 CTACAAAGACTTATATTTAGGAACGGG 57.742 37.037 0.00 0.00 0.00 5.28
2162 3032 9.256228 ACAGTGGAATCTCTACAAAGACTTATA 57.744 33.333 0.00 0.00 29.47 0.98
2163 3033 8.037758 CACAGTGGAATCTCTACAAAGACTTAT 58.962 37.037 0.00 0.00 29.47 1.73
2164 3034 7.378966 CACAGTGGAATCTCTACAAAGACTTA 58.621 38.462 0.00 0.00 29.47 2.24
2165 3035 6.226787 CACAGTGGAATCTCTACAAAGACTT 58.773 40.000 0.00 0.00 29.47 3.01
2166 3036 5.279708 CCACAGTGGAATCTCTACAAAGACT 60.280 44.000 15.35 0.00 40.96 3.24
2167 3037 4.932200 CCACAGTGGAATCTCTACAAAGAC 59.068 45.833 15.35 0.00 40.96 3.01
2168 3038 4.838423 TCCACAGTGGAATCTCTACAAAGA 59.162 41.667 20.84 0.00 45.00 2.52
2169 3039 5.152623 TCCACAGTGGAATCTCTACAAAG 57.847 43.478 20.84 0.00 45.00 2.77
2181 3051 2.097036 CCGTATGTAGTCCACAGTGGA 58.903 52.381 19.21 19.21 45.98 4.02
2182 3052 2.097036 TCCGTATGTAGTCCACAGTGG 58.903 52.381 14.19 14.19 41.51 4.00
2183 3053 2.479730 GCTCCGTATGTAGTCCACAGTG 60.480 54.545 0.00 0.00 41.51 3.66
2184 3054 1.749634 GCTCCGTATGTAGTCCACAGT 59.250 52.381 0.00 0.00 41.51 3.55
2185 3055 1.749063 TGCTCCGTATGTAGTCCACAG 59.251 52.381 0.00 0.00 41.51 3.66
2186 3056 1.842052 TGCTCCGTATGTAGTCCACA 58.158 50.000 0.00 0.00 42.69 4.17
2187 3057 2.953466 TTGCTCCGTATGTAGTCCAC 57.047 50.000 0.00 0.00 0.00 4.02
2188 3058 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
2189 3059 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
2190 3060 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2191 3061 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2192 3062 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2193 3063 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2194 3064 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2195 3065 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2196 3066 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2197 3067 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2198 3068 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2199 3069 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2200 3070 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2201 3071 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2212 3082 7.280876 TGGATGCATTTTAGAGTGTAGATTCAC 59.719 37.037 0.00 0.00 38.46 3.18
2213 3083 7.280876 GTGGATGCATTTTAGAGTGTAGATTCA 59.719 37.037 0.00 0.00 0.00 2.57
2214 3084 7.280876 TGTGGATGCATTTTAGAGTGTAGATTC 59.719 37.037 0.00 0.00 0.00 2.52
2215 3085 7.112122 TGTGGATGCATTTTAGAGTGTAGATT 58.888 34.615 0.00 0.00 0.00 2.40
2216 3086 6.653020 TGTGGATGCATTTTAGAGTGTAGAT 58.347 36.000 0.00 0.00 0.00 1.98
2217 3087 6.048732 TGTGGATGCATTTTAGAGTGTAGA 57.951 37.500 0.00 0.00 0.00 2.59
2218 3088 6.932356 ATGTGGATGCATTTTAGAGTGTAG 57.068 37.500 0.00 0.00 0.00 2.74
2219 3089 7.334858 TGTATGTGGATGCATTTTAGAGTGTA 58.665 34.615 0.00 0.00 0.00 2.90
2220 3090 6.179756 TGTATGTGGATGCATTTTAGAGTGT 58.820 36.000 0.00 0.00 0.00 3.55
2221 3091 6.682423 TGTATGTGGATGCATTTTAGAGTG 57.318 37.500 0.00 0.00 0.00 3.51
2222 3092 7.228108 CAGATGTATGTGGATGCATTTTAGAGT 59.772 37.037 0.00 0.00 35.26 3.24
2223 3093 7.582352 CAGATGTATGTGGATGCATTTTAGAG 58.418 38.462 0.00 0.00 35.26 2.43
2224 3094 6.016860 GCAGATGTATGTGGATGCATTTTAGA 60.017 38.462 0.00 0.00 35.26 2.10
2225 3095 6.147581 GCAGATGTATGTGGATGCATTTTAG 58.852 40.000 0.00 0.00 35.26 1.85
2226 3096 5.593502 TGCAGATGTATGTGGATGCATTTTA 59.406 36.000 0.00 0.00 38.64 1.52
2227 3097 4.403113 TGCAGATGTATGTGGATGCATTTT 59.597 37.500 0.00 0.00 38.64 1.82
2228 3098 3.955551 TGCAGATGTATGTGGATGCATTT 59.044 39.130 0.00 0.00 38.64 2.32
2229 3099 3.558033 TGCAGATGTATGTGGATGCATT 58.442 40.909 0.00 0.00 38.64 3.56
2230 3100 3.217681 TGCAGATGTATGTGGATGCAT 57.782 42.857 0.00 0.00 38.64 3.96
2231 3101 2.713863 TGCAGATGTATGTGGATGCA 57.286 45.000 0.00 0.00 41.05 3.96
2232 3102 3.554259 CATGCAGATGTATGTGGATGC 57.446 47.619 9.81 0.00 41.44 3.91
2239 3109 5.334646 GCTATGGACAACATGCAGATGTATG 60.335 44.000 9.06 9.06 42.30 2.39
2240 3110 4.758674 GCTATGGACAACATGCAGATGTAT 59.241 41.667 0.00 0.00 42.30 2.29
2241 3111 4.129380 GCTATGGACAACATGCAGATGTA 58.871 43.478 0.00 0.00 42.30 2.29
2242 3112 2.947652 GCTATGGACAACATGCAGATGT 59.052 45.455 0.00 0.00 45.24 3.06
2243 3113 2.032290 CGCTATGGACAACATGCAGATG 60.032 50.000 0.00 0.00 40.82 2.90
2244 3114 2.158914 TCGCTATGGACAACATGCAGAT 60.159 45.455 0.00 0.00 40.82 2.90
2245 3115 1.206849 TCGCTATGGACAACATGCAGA 59.793 47.619 0.00 0.00 40.82 4.26
2246 3116 1.655484 TCGCTATGGACAACATGCAG 58.345 50.000 0.00 0.00 40.82 4.41
2247 3117 2.106477 TTCGCTATGGACAACATGCA 57.894 45.000 0.00 0.00 40.82 3.96
2248 3118 3.313526 AGAATTCGCTATGGACAACATGC 59.686 43.478 0.00 0.00 40.82 4.06
2249 3119 4.813161 AGAGAATTCGCTATGGACAACATG 59.187 41.667 10.24 0.00 40.82 3.21
2250 3120 5.028549 AGAGAATTCGCTATGGACAACAT 57.971 39.130 10.24 0.00 43.68 2.71
2251 3121 4.471904 AGAGAATTCGCTATGGACAACA 57.528 40.909 10.24 0.00 0.00 3.33
2252 3122 5.348986 TGTAGAGAATTCGCTATGGACAAC 58.651 41.667 19.92 9.91 31.23 3.32
2253 3123 5.592104 TGTAGAGAATTCGCTATGGACAA 57.408 39.130 19.92 0.00 31.23 3.18
2254 3124 5.592104 TTGTAGAGAATTCGCTATGGACA 57.408 39.130 19.92 13.73 31.23 4.02
2255 3125 6.199342 GTCTTTGTAGAGAATTCGCTATGGAC 59.801 42.308 19.92 18.60 31.23 4.02
2256 3126 6.096987 AGTCTTTGTAGAGAATTCGCTATGGA 59.903 38.462 19.92 13.05 31.23 3.41
2257 3127 6.276847 AGTCTTTGTAGAGAATTCGCTATGG 58.723 40.000 19.92 11.38 31.23 2.74
2258 3128 7.763172 AAGTCTTTGTAGAGAATTCGCTATG 57.237 36.000 19.92 11.70 28.67 2.23
2273 3143 9.853177 CCTCCATTCCTAAATATAAGTCTTTGT 57.147 33.333 0.00 0.00 0.00 2.83
2274 3144 9.289782 CCCTCCATTCCTAAATATAAGTCTTTG 57.710 37.037 0.00 0.00 0.00 2.77
2275 3145 9.237706 TCCCTCCATTCCTAAATATAAGTCTTT 57.762 33.333 0.00 0.00 0.00 2.52
2276 3146 8.814448 TCCCTCCATTCCTAAATATAAGTCTT 57.186 34.615 0.00 0.00 0.00 3.01
2277 3147 8.242325 TCTCCCTCCATTCCTAAATATAAGTCT 58.758 37.037 0.00 0.00 0.00 3.24
2278 3148 8.437274 TCTCCCTCCATTCCTAAATATAAGTC 57.563 38.462 0.00 0.00 0.00 3.01
2279 3149 8.814448 TTCTCCCTCCATTCCTAAATATAAGT 57.186 34.615 0.00 0.00 0.00 2.24
2280 3150 9.678260 CATTCTCCCTCCATTCCTAAATATAAG 57.322 37.037 0.00 0.00 0.00 1.73
2281 3151 8.614814 CCATTCTCCCTCCATTCCTAAATATAA 58.385 37.037 0.00 0.00 0.00 0.98
2282 3152 7.967170 TCCATTCTCCCTCCATTCCTAAATATA 59.033 37.037 0.00 0.00 0.00 0.86
2283 3153 6.799582 TCCATTCTCCCTCCATTCCTAAATAT 59.200 38.462 0.00 0.00 0.00 1.28
2284 3154 6.157536 TCCATTCTCCCTCCATTCCTAAATA 58.842 40.000 0.00 0.00 0.00 1.40
2285 3155 4.984268 TCCATTCTCCCTCCATTCCTAAAT 59.016 41.667 0.00 0.00 0.00 1.40
2286 3156 4.379875 TCCATTCTCCCTCCATTCCTAAA 58.620 43.478 0.00 0.00 0.00 1.85
2287 3157 3.976654 CTCCATTCTCCCTCCATTCCTAA 59.023 47.826 0.00 0.00 0.00 2.69
2288 3158 3.591789 CTCCATTCTCCCTCCATTCCTA 58.408 50.000 0.00 0.00 0.00 2.94
2289 3159 2.416638 CTCCATTCTCCCTCCATTCCT 58.583 52.381 0.00 0.00 0.00 3.36
2290 3160 1.423161 CCTCCATTCTCCCTCCATTCC 59.577 57.143 0.00 0.00 0.00 3.01
2291 3161 1.423161 CCCTCCATTCTCCCTCCATTC 59.577 57.143 0.00 0.00 0.00 2.67
2292 3162 1.011293 TCCCTCCATTCTCCCTCCATT 59.989 52.381 0.00 0.00 0.00 3.16
2293 3163 0.649992 TCCCTCCATTCTCCCTCCAT 59.350 55.000 0.00 0.00 0.00 3.41
2294 3164 0.030705 CTCCCTCCATTCTCCCTCCA 60.031 60.000 0.00 0.00 0.00 3.86
2295 3165 0.030603 ACTCCCTCCATTCTCCCTCC 60.031 60.000 0.00 0.00 0.00 4.30
2296 3166 2.321719 GTACTCCCTCCATTCTCCCTC 58.678 57.143 0.00 0.00 0.00 4.30
2297 3167 1.651770 TGTACTCCCTCCATTCTCCCT 59.348 52.381 0.00 0.00 0.00 4.20
2298 3168 2.176247 TGTACTCCCTCCATTCTCCC 57.824 55.000 0.00 0.00 0.00 4.30
2299 3169 2.635427 GGATGTACTCCCTCCATTCTCC 59.365 54.545 0.00 0.00 38.19 3.71
2300 3170 3.582164 AGGATGTACTCCCTCCATTCTC 58.418 50.000 7.50 0.00 46.27 2.87
2301 3171 3.715648 AGGATGTACTCCCTCCATTCT 57.284 47.619 7.50 0.00 46.27 2.40
2302 3172 4.779993 AAAGGATGTACTCCCTCCATTC 57.220 45.455 7.01 0.00 46.27 2.67
2303 3173 4.860022 CAAAAGGATGTACTCCCTCCATT 58.140 43.478 7.01 0.00 46.27 3.16
2304 3174 3.372025 GCAAAAGGATGTACTCCCTCCAT 60.372 47.826 7.01 0.00 46.27 3.41
2305 3175 2.026262 GCAAAAGGATGTACTCCCTCCA 60.026 50.000 7.01 0.00 46.27 3.86
2306 3176 2.026262 TGCAAAAGGATGTACTCCCTCC 60.026 50.000 7.01 2.56 46.27 4.30
2307 3177 3.350219 TGCAAAAGGATGTACTCCCTC 57.650 47.619 7.01 0.00 46.27 4.30
2308 3178 3.624777 CATGCAAAAGGATGTACTCCCT 58.375 45.455 0.00 4.66 46.27 4.20
2309 3179 2.099756 GCATGCAAAAGGATGTACTCCC 59.900 50.000 14.21 2.60 46.27 4.30
2310 3180 2.099756 GGCATGCAAAAGGATGTACTCC 59.900 50.000 21.36 0.00 45.33 3.85
2311 3181 3.019564 AGGCATGCAAAAGGATGTACTC 58.980 45.455 21.36 0.00 0.00 2.59
2312 3182 2.756760 CAGGCATGCAAAAGGATGTACT 59.243 45.455 21.36 0.00 0.00 2.73
2313 3183 3.155093 CAGGCATGCAAAAGGATGTAC 57.845 47.619 21.36 0.00 0.00 2.90
2332 3202 0.184933 ACAGCAGGGTTACAAAGGCA 59.815 50.000 0.00 0.00 0.00 4.75
2337 3207 4.020543 ACTTCAAAACAGCAGGGTTACAA 58.979 39.130 0.00 0.00 0.00 2.41
2358 3228 2.998316 CCATCAGGAGAAGGGAGAAC 57.002 55.000 0.00 0.00 36.89 3.01
2413 3283 5.766670 AGCCACACCATTATCATGATAACAG 59.233 40.000 26.51 21.98 36.24 3.16
2464 3334 2.804986 TCAAATCAGCCATACCAGCA 57.195 45.000 0.00 0.00 0.00 4.41
2465 3335 4.176271 GTTTTCAAATCAGCCATACCAGC 58.824 43.478 0.00 0.00 0.00 4.85
2466 3336 5.389859 TGTTTTCAAATCAGCCATACCAG 57.610 39.130 0.00 0.00 0.00 4.00
2467 3337 5.304101 ACTTGTTTTCAAATCAGCCATACCA 59.696 36.000 0.00 0.00 39.47 3.25
2468 3338 5.783111 ACTTGTTTTCAAATCAGCCATACC 58.217 37.500 0.00 0.00 39.47 2.73
2494 3364 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2496 3366 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
2497 3367 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
2498 3368 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
2500 3370 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
2501 3371 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
2502 3372 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
2503 3373 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
2504 3374 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
2510 3380 9.485206 ACACTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 22.95 0.00 40.24 0.86
2511 3381 8.876275 ACACTAGTGTCAAAAACGTTCTTATA 57.124 30.769 22.95 0.00 40.24 0.98
2512 3382 7.781548 ACACTAGTGTCAAAAACGTTCTTAT 57.218 32.000 22.95 0.00 40.24 1.73
2513 3383 7.975616 ACTACACTAGTGTCAAAAACGTTCTTA 59.024 33.333 31.11 8.36 43.74 2.10
2514 3384 6.815142 ACTACACTAGTGTCAAAAACGTTCTT 59.185 34.615 31.11 4.99 43.74 2.52
2515 3385 6.335777 ACTACACTAGTGTCAAAAACGTTCT 58.664 36.000 31.11 5.44 43.74 3.01
2516 3386 6.579491 ACTACACTAGTGTCAAAAACGTTC 57.421 37.500 31.11 0.00 43.74 3.95
2546 3416 8.714906 CCCTCCGTCCCATAATATAAGAATATT 58.285 37.037 0.00 0.00 40.59 1.28
2547 3417 8.071854 TCCCTCCGTCCCATAATATAAGAATAT 58.928 37.037 0.00 0.00 0.00 1.28
2548 3418 7.424172 TCCCTCCGTCCCATAATATAAGAATA 58.576 38.462 0.00 0.00 0.00 1.75
2549 3419 6.269194 TCCCTCCGTCCCATAATATAAGAAT 58.731 40.000 0.00 0.00 0.00 2.40
2550 3420 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
2551 3421 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2552 3422 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2553 3423 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2554 3424 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2555 3425 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2556 3426 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
2557 3427 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
2558 3428 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
2559 3429 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
2560 3430 1.229131 TACTACTCCCTCCGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
2561 3431 1.002069 TTACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
2562 3432 2.149973 TTTACTACTCCCTCCGTCCC 57.850 55.000 0.00 0.00 0.00 4.46
2563 3433 4.468713 ACTATTTACTACTCCCTCCGTCC 58.531 47.826 0.00 0.00 0.00 4.79
2564 3434 6.295249 AGTACTATTTACTACTCCCTCCGTC 58.705 44.000 0.00 0.00 0.00 4.79
2565 3435 6.259346 AGTACTATTTACTACTCCCTCCGT 57.741 41.667 0.00 0.00 0.00 4.69
2566 3436 6.799926 GAGTACTATTTACTACTCCCTCCG 57.200 45.833 0.00 0.00 34.96 4.63
2572 3442 6.295249 ACGGAGGGAGTACTATTTACTACTC 58.705 44.000 0.00 0.00 38.70 2.59
2573 3443 6.259346 ACGGAGGGAGTACTATTTACTACT 57.741 41.667 0.00 0.00 0.00 2.57
2574 3444 8.451908 TTTACGGAGGGAGTACTATTTACTAC 57.548 38.462 0.00 0.00 0.00 2.73
2575 3445 8.494433 TCTTTACGGAGGGAGTACTATTTACTA 58.506 37.037 0.00 0.00 0.00 1.82
2576 3446 7.349598 TCTTTACGGAGGGAGTACTATTTACT 58.650 38.462 0.00 0.00 0.00 2.24
2577 3447 7.573968 TCTTTACGGAGGGAGTACTATTTAC 57.426 40.000 0.00 0.00 0.00 2.01
2578 3448 8.593945 TTTCTTTACGGAGGGAGTACTATTTA 57.406 34.615 0.00 0.00 0.00 1.40
2579 3449 7.486407 TTTCTTTACGGAGGGAGTACTATTT 57.514 36.000 0.00 0.00 0.00 1.40
2580 3450 7.672122 ATTTCTTTACGGAGGGAGTACTATT 57.328 36.000 0.00 0.00 0.00 1.73
2581 3451 8.953223 ATATTTCTTTACGGAGGGAGTACTAT 57.047 34.615 0.00 0.00 0.00 2.12
2582 3452 9.866655 TTATATTTCTTTACGGAGGGAGTACTA 57.133 33.333 0.00 0.00 0.00 1.82
2583 3453 8.773033 TTATATTTCTTTACGGAGGGAGTACT 57.227 34.615 0.00 0.00 0.00 2.73
2584 3454 8.854117 TCTTATATTTCTTTACGGAGGGAGTAC 58.146 37.037 0.00 0.00 0.00 2.73
2585 3455 9.075678 CTCTTATATTTCTTTACGGAGGGAGTA 57.924 37.037 0.00 0.00 0.00 2.59
2586 3456 7.564292 ACTCTTATATTTCTTTACGGAGGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
2587 3457 7.868415 CACTCTTATATTTCTTTACGGAGGGAG 59.132 40.741 0.00 0.00 0.00 4.30
2588 3458 7.343833 ACACTCTTATATTTCTTTACGGAGGGA 59.656 37.037 0.00 0.00 0.00 4.20
2589 3459 7.498443 ACACTCTTATATTTCTTTACGGAGGG 58.502 38.462 0.00 0.00 0.00 4.30
2590 3460 8.943909 AACACTCTTATATTTCTTTACGGAGG 57.056 34.615 0.00 0.00 0.00 4.30
2638 3508 9.379791 CCTCCGTAAAGAAATATAAGAGTGTTT 57.620 33.333 0.00 0.00 0.00 2.83
2639 3509 7.985752 CCCTCCGTAAAGAAATATAAGAGTGTT 59.014 37.037 0.00 0.00 0.00 3.32
2640 3510 7.343833 TCCCTCCGTAAAGAAATATAAGAGTGT 59.656 37.037 0.00 0.00 0.00 3.55
2641 3511 7.723324 TCCCTCCGTAAAGAAATATAAGAGTG 58.277 38.462 0.00 0.00 0.00 3.51
2642 3512 7.564292 ACTCCCTCCGTAAAGAAATATAAGAGT 59.436 37.037 0.00 0.00 0.00 3.24
2643 3513 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
2644 3514 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
2645 3515 8.858094 AGTACTCCCTCCGTAAAGAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
2646 3516 8.773033 AGTACTCCCTCCGTAAAGAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
2647 3517 9.289782 GTAGTACTCCCTCCGTAAAGAAATATA 57.710 37.037 0.00 0.00 0.00 0.86
2648 3518 7.232330 GGTAGTACTCCCTCCGTAAAGAAATAT 59.768 40.741 0.00 0.00 0.00 1.28
2649 3519 6.547510 GGTAGTACTCCCTCCGTAAAGAAATA 59.452 42.308 0.00 0.00 0.00 1.40
2650 3520 5.362143 GGTAGTACTCCCTCCGTAAAGAAAT 59.638 44.000 0.00 0.00 0.00 2.17
2651 3521 4.706962 GGTAGTACTCCCTCCGTAAAGAAA 59.293 45.833 0.00 0.00 0.00 2.52
2652 3522 4.263905 TGGTAGTACTCCCTCCGTAAAGAA 60.264 45.833 6.02 0.00 0.00 2.52
2653 3523 3.266772 TGGTAGTACTCCCTCCGTAAAGA 59.733 47.826 6.02 0.00 0.00 2.52
2654 3524 3.624777 TGGTAGTACTCCCTCCGTAAAG 58.375 50.000 6.02 0.00 0.00 1.85
2655 3525 3.737559 TGGTAGTACTCCCTCCGTAAA 57.262 47.619 6.02 0.00 0.00 2.01
2656 3526 3.737559 TTGGTAGTACTCCCTCCGTAA 57.262 47.619 6.02 0.00 0.00 3.18
2657 3527 3.737559 TTTGGTAGTACTCCCTCCGTA 57.262 47.619 6.02 0.00 0.00 4.02
2658 3528 2.610438 TTTGGTAGTACTCCCTCCGT 57.390 50.000 6.02 0.00 0.00 4.69
2659 3529 3.094572 TCTTTTGGTAGTACTCCCTCCG 58.905 50.000 6.02 0.00 0.00 4.63
2660 3530 4.683671 GCATCTTTTGGTAGTACTCCCTCC 60.684 50.000 6.02 3.17 0.00 4.30
2661 3531 4.081087 TGCATCTTTTGGTAGTACTCCCTC 60.081 45.833 6.02 0.00 0.00 4.30
2662 3532 3.844211 TGCATCTTTTGGTAGTACTCCCT 59.156 43.478 6.02 0.00 0.00 4.20
2663 3533 4.192317 CTGCATCTTTTGGTAGTACTCCC 58.808 47.826 0.00 0.00 0.00 4.30
2664 3534 4.192317 CCTGCATCTTTTGGTAGTACTCC 58.808 47.826 0.00 1.20 0.00 3.85
2665 3535 3.623510 GCCTGCATCTTTTGGTAGTACTC 59.376 47.826 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.