Multiple sequence alignment - TraesCS1A01G347700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G347700 chr1A 100.000 9844 0 0 1 9844 533456838 533446995 0.000000e+00 18179.0
1 TraesCS1A01G347700 chr1A 98.684 76 1 0 4113 4188 533452655 533452580 1.720000e-27 135.0
2 TraesCS1A01G347700 chr1A 98.684 76 1 0 4184 4259 533452726 533452651 1.720000e-27 135.0
3 TraesCS1A01G347700 chr1A 100.000 36 0 0 155 190 533456642 533456607 6.380000e-07 67.6
4 TraesCS1A01G347700 chr1A 100.000 36 0 0 197 232 533456684 533456649 6.380000e-07 67.6
5 TraesCS1A01G347700 chr1A 88.679 53 6 0 7584 7636 487092092 487092144 2.290000e-06 65.8
6 TraesCS1A01G347700 chr1D 95.002 5722 186 51 4184 9844 436194397 436188715 0.000000e+00 8890.0
7 TraesCS1A01G347700 chr1D 88.393 2645 107 78 524 3023 436197947 436195358 0.000000e+00 3000.0
8 TraesCS1A01G347700 chr1D 92.748 717 31 9 3120 3829 436195338 436194636 0.000000e+00 1016.0
9 TraesCS1A01G347700 chr1D 93.891 311 15 3 3878 4188 436194630 436194324 5.380000e-127 466.0
10 TraesCS1A01G347700 chr1D 97.348 264 7 0 1 264 436199982 436199719 5.420000e-122 449.0
11 TraesCS1A01G347700 chr1D 94.845 194 10 0 261 454 436199560 436199367 4.470000e-78 303.0
12 TraesCS1A01G347700 chr1D 86.170 94 13 0 5910 6003 407217114 407217207 1.750000e-17 102.0
13 TraesCS1A01G347700 chr1D 100.000 36 0 0 155 190 436199786 436199751 6.380000e-07 67.6
14 TraesCS1A01G347700 chr1D 100.000 36 0 0 197 232 436199828 436199793 6.380000e-07 67.6
15 TraesCS1A01G347700 chr1D 88.679 53 6 0 7584 7636 387426651 387426703 2.290000e-06 65.8
16 TraesCS1A01G347700 chr1B 93.697 3871 144 35 6057 9844 591112876 591109023 0.000000e+00 5705.0
17 TraesCS1A01G347700 chr1B 88.260 2615 127 76 524 3023 591118213 591115664 0.000000e+00 2963.0
18 TraesCS1A01G347700 chr1B 93.792 1772 73 15 4184 5925 591114703 591112939 0.000000e+00 2628.0
19 TraesCS1A01G347700 chr1B 91.248 777 33 14 3061 3830 591115692 591114944 0.000000e+00 1026.0
20 TraesCS1A01G347700 chr1B 94.231 312 15 2 3878 4188 591114939 591114630 3.220000e-129 473.0
21 TraesCS1A01G347700 chr5B 87.151 358 27 9 1128 1484 383037789 383038128 1.200000e-103 388.0
22 TraesCS1A01G347700 chr3B 80.615 423 69 12 7260 7672 504982047 504981628 2.060000e-81 315.0
23 TraesCS1A01G347700 chr3B 88.679 53 6 0 7596 7648 607383460 607383512 2.290000e-06 65.8
24 TraesCS1A01G347700 chr3B 96.875 32 1 0 5978 6009 803561998 803562029 5.000000e-03 54.7
25 TraesCS1A01G347700 chr3D 79.669 423 73 12 7260 7672 388333093 388332674 9.670000e-75 292.0
26 TraesCS1A01G347700 chr3A 79.669 423 73 12 7260 7672 509421516 509421097 9.670000e-75 292.0
27 TraesCS1A01G347700 chr3A 90.566 53 5 0 7596 7648 601557475 601557423 4.930000e-08 71.3
28 TraesCS1A01G347700 chr4D 86.316 95 6 4 5917 6011 388127917 388128004 8.140000e-16 97.1
29 TraesCS1A01G347700 chr4A 95.238 42 2 0 5918 5959 654181409 654181450 6.380000e-07 67.6
30 TraesCS1A01G347700 chr6A 92.857 42 3 0 409 450 447158290 447158331 2.970000e-05 62.1
31 TraesCS1A01G347700 chr2A 93.182 44 0 3 5914 5955 718385733 718385691 2.970000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G347700 chr1A 533446995 533456838 9843 True 18179.0 18179 100.000000 1 9844 1 chr1A.!!$R1 9843
1 TraesCS1A01G347700 chr1D 436188715 436199982 11267 True 1782.4 8890 95.278375 1 9844 8 chr1D.!!$R1 9843
2 TraesCS1A01G347700 chr1B 591109023 591118213 9190 True 2559.0 5705 92.245600 524 9844 5 chr1B.!!$R1 9320

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
450 613 0.251877 TGTGGTCCTGTATCCGTCCA 60.252 55.000 0.00 0.00 0.00 4.02 F
1715 3353 0.034089 ATAGGTCAGCTTGGTTGCCC 60.034 55.000 0.00 0.00 0.00 5.36 F
1728 3366 0.038166 GTTGCCCACCTCCAATCTCA 59.962 55.000 0.00 0.00 0.00 3.27 F
1731 3369 0.107459 GCCCACCTCCAATCTCACTC 60.107 60.000 0.00 0.00 0.00 3.51 F
2091 3765 0.108281 GGCGGAGGTGAAAGAGGTAC 60.108 60.000 0.00 0.00 0.00 3.34 F
2094 3768 0.108281 GGAGGTGAAAGAGGTACCGC 60.108 60.000 7.70 7.70 39.46 5.68 F
3117 4808 0.109412 GTGAGTCAAATGCTGCCAGC 60.109 55.000 10.45 10.45 42.82 4.85 F
4189 5888 0.689623 AGTCTTTGCTAGGCTGTGCT 59.310 50.000 13.81 0.00 37.45 4.40 F
4936 6636 0.102481 ACGTGAACTATAGCCAGGCG 59.898 55.000 5.55 0.00 0.00 5.52 F
5685 7399 1.202486 TCTGACGTCCCGATAATTGGC 60.202 52.381 14.12 0.00 0.00 4.52 F
6548 8308 1.149288 AGAGGAGTGGAGGGTGTAACA 59.851 52.381 0.00 0.00 39.98 2.41 F
7415 9175 0.176910 GTGGCCTCCTTAGAGCAGAC 59.823 60.000 3.32 0.00 38.96 3.51 F
7780 9562 3.195661 CCCTAACCGCATGAAGAACTAC 58.804 50.000 0.00 0.00 0.00 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 3368 0.034380 TTGTTCGGTTGTTGGGTGGA 60.034 50.000 0.00 0.00 0.00 4.02 R
3118 4809 0.464870 CTGGAGGAGATCAGTGGCAG 59.535 60.000 0.00 0.00 0.00 4.85 R
3366 5057 0.486879 TCCAAGCCCATGGTTTCCTT 59.513 50.000 11.73 4.78 41.46 3.36 R
3572 5270 0.986527 TCAAGGGAAGCATGCTCAGA 59.013 50.000 22.93 9.85 0.00 3.27 R
3577 5275 1.648467 GGTCGTCAAGGGAAGCATGC 61.648 60.000 10.51 10.51 0.00 4.06 R
3916 5614 1.738099 GCCGTCGCTGTCTCACAAT 60.738 57.895 0.00 0.00 0.00 2.71 R
4231 5930 0.031585 AGCAAAGACTCGTACGCACA 59.968 50.000 11.24 0.00 0.00 4.57 R
6120 7850 0.178068 GGATGAGCCGGCTTTACAGA 59.822 55.000 33.34 10.96 0.00 3.41 R
6166 7910 0.179018 GGACCACAGCTTGTCCTTGT 60.179 55.000 16.18 0.00 46.13 3.16 R
7340 9100 0.811915 ATACACGCTTGAGCTCTCGT 59.188 50.000 16.19 17.61 39.32 4.18 R
8007 9789 0.032952 AAGAGCCTTGTTCGCGTGTA 59.967 50.000 5.77 0.00 0.00 2.90 R
8257 10041 0.038892 ACACTACATCGACGCCGTTT 60.039 50.000 0.00 0.00 37.05 3.60 R
9390 11194 0.178068 CCGGACCCAATCACTACCAG 59.822 60.000 0.00 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
98 99 3.216800 AGAAACACATTCTCAGCAGCAA 58.783 40.909 0.00 0.00 45.42 3.91
104 105 7.578310 AACACATTCTCAGCAGCAATTATAT 57.422 32.000 0.00 0.00 0.00 0.86
234 235 5.233957 TGGCAAAAGATATGACATCAACG 57.766 39.130 0.00 0.00 28.68 4.10
277 440 3.489563 GCAAGTAGCAACGATATCACG 57.510 47.619 3.12 0.00 44.79 4.35
362 525 2.079925 CTGTCAAGCTTGGAACTAGCC 58.920 52.381 25.73 5.26 39.47 3.93
365 528 0.321653 CAAGCTTGGAACTAGCCCGT 60.322 55.000 19.14 0.00 39.47 5.28
393 556 0.463116 AACGCCAACTCTCAAACCGT 60.463 50.000 0.00 0.00 0.00 4.83
403 566 4.676586 CAAACCGTCCGCAACCGC 62.677 66.667 0.00 0.00 0.00 5.68
423 586 2.466846 CGTAGTCTGGACGTGTTTTGT 58.533 47.619 0.00 0.00 35.58 2.83
433 596 3.004315 GGACGTGTTTTGTCATCCAATGT 59.996 43.478 0.00 0.00 38.10 2.71
446 609 1.484653 TCCAATGTGGTCCTGTATCCG 59.515 52.381 0.00 0.00 39.03 4.18
450 613 0.251877 TGTGGTCCTGTATCCGTCCA 60.252 55.000 0.00 0.00 0.00 4.02
454 617 1.760613 GGTCCTGTATCCGTCCATGAA 59.239 52.381 0.00 0.00 0.00 2.57
455 618 2.169769 GGTCCTGTATCCGTCCATGAAA 59.830 50.000 0.00 0.00 0.00 2.69
458 621 2.159156 CCTGTATCCGTCCATGAAACGA 60.159 50.000 18.46 8.09 42.62 3.85
522 2008 4.118995 CGCAATGCATGGCCACGT 62.119 61.111 20.50 0.00 0.00 4.49
523 2009 2.202650 GCAATGCATGGCCACGTC 60.203 61.111 15.73 0.00 0.00 4.34
524 2010 2.100797 CAATGCATGGCCACGTCG 59.899 61.111 8.16 0.00 0.00 5.12
525 2011 3.814268 AATGCATGGCCACGTCGC 61.814 61.111 8.16 9.71 0.00 5.19
566 2080 1.084289 CCAGCTTTACTTACCACGGC 58.916 55.000 0.00 0.00 0.00 5.68
600 2114 1.004398 CTCAGCTGCTACTACGACTCG 60.004 57.143 9.47 0.00 0.00 4.18
601 2115 0.727970 CAGCTGCTACTACGACTCGT 59.272 55.000 9.45 9.45 44.35 4.18
602 2116 1.130749 CAGCTGCTACTACGACTCGTT 59.869 52.381 9.84 0.00 41.54 3.85
603 2117 2.350804 CAGCTGCTACTACGACTCGTTA 59.649 50.000 9.84 0.00 41.54 3.18
605 2119 2.538535 GCTGCTACTACGACTCGTTACC 60.539 54.545 9.84 0.00 41.54 2.85
608 2137 1.929836 CTACTACGACTCGTTACCGCT 59.070 52.381 9.84 0.00 41.54 5.52
611 2140 2.567470 TACGACTCGTTACCGCTGCG 62.567 60.000 16.34 16.34 41.54 5.18
680 2227 1.289109 CCTGGCTGTGTCGTTAACCG 61.289 60.000 0.00 0.00 38.13 4.44
713 2272 2.613977 CCGGGATATTCATGTCTGCTCC 60.614 54.545 0.00 0.00 0.00 4.70
719 2278 5.240403 GGATATTCATGTCTGCTCCTTTTCC 59.760 44.000 0.00 0.00 0.00 3.13
727 2290 4.796495 CTCCTTTTCCCCGGCCCG 62.796 72.222 0.00 0.00 0.00 6.13
842 2413 2.510238 GCCGCAGCCAGTGAGTAG 60.510 66.667 0.00 0.00 0.00 2.57
847 2418 1.468224 CGCAGCCAGTGAGTAGTACTG 60.468 57.143 7.76 0.00 43.94 2.74
872 2443 1.209128 CGTAGCATTAGGTCGCCTTG 58.791 55.000 3.71 0.00 34.61 3.61
905 2476 1.200252 CGTGAGCTATATCACCCCTCG 59.800 57.143 1.54 0.00 45.56 4.63
907 2478 0.533032 GAGCTATATCACCCCTCGCC 59.467 60.000 0.00 0.00 0.00 5.54
991 2578 4.459089 GGACGGACTGCTCTGCCC 62.459 72.222 0.00 0.00 0.00 5.36
1267 2890 4.467084 CGTCGGTGATGGGGTGGG 62.467 72.222 0.00 0.00 0.00 4.61
1714 3352 1.098050 CATAGGTCAGCTTGGTTGCC 58.902 55.000 0.00 0.00 0.00 4.52
1715 3353 0.034089 ATAGGTCAGCTTGGTTGCCC 60.034 55.000 0.00 0.00 0.00 5.36
1716 3354 1.422977 TAGGTCAGCTTGGTTGCCCA 61.423 55.000 0.00 0.00 39.65 5.36
1717 3355 2.564721 GGTCAGCTTGGTTGCCCAC 61.565 63.158 0.00 0.00 41.67 4.61
1727 3365 0.681243 GGTTGCCCACCTCCAATCTC 60.681 60.000 0.00 0.00 43.29 2.75
1728 3366 0.038166 GTTGCCCACCTCCAATCTCA 59.962 55.000 0.00 0.00 0.00 3.27
1730 3368 0.842030 TGCCCACCTCCAATCTCACT 60.842 55.000 0.00 0.00 0.00 3.41
1731 3369 0.107459 GCCCACCTCCAATCTCACTC 60.107 60.000 0.00 0.00 0.00 3.51
1733 3371 1.279496 CCACCTCCAATCTCACTCCA 58.721 55.000 0.00 0.00 0.00 3.86
1734 3372 1.065854 CCACCTCCAATCTCACTCCAC 60.066 57.143 0.00 0.00 0.00 4.02
1737 3375 1.279496 CTCCAATCTCACTCCACCCA 58.721 55.000 0.00 0.00 0.00 4.51
1739 3377 1.351017 TCCAATCTCACTCCACCCAAC 59.649 52.381 0.00 0.00 0.00 3.77
1740 3378 1.073763 CCAATCTCACTCCACCCAACA 59.926 52.381 0.00 0.00 0.00 3.33
1742 3380 2.554032 CAATCTCACTCCACCCAACAAC 59.446 50.000 0.00 0.00 0.00 3.32
1743 3381 0.472471 TCTCACTCCACCCAACAACC 59.528 55.000 0.00 0.00 0.00 3.77
1744 3382 0.884704 CTCACTCCACCCAACAACCG 60.885 60.000 0.00 0.00 0.00 4.44
1745 3383 1.147376 CACTCCACCCAACAACCGA 59.853 57.895 0.00 0.00 0.00 4.69
1746 3384 0.464735 CACTCCACCCAACAACCGAA 60.465 55.000 0.00 0.00 0.00 4.30
1750 3388 1.036707 CCACCCAACAACCGAACAAT 58.963 50.000 0.00 0.00 0.00 2.71
1781 3433 0.679640 TCCCTAGCCGCATTTGGTTG 60.680 55.000 0.00 0.00 0.00 3.77
1974 3632 0.470833 CCCACAATCCCCAACCAACA 60.471 55.000 0.00 0.00 0.00 3.33
1977 3639 0.188342 ACAATCCCCAACCAACAGCT 59.812 50.000 0.00 0.00 0.00 4.24
1992 3654 2.358957 ACAGCTAAATCATTCTGCGCA 58.641 42.857 10.98 10.98 0.00 6.09
1994 3656 1.672881 AGCTAAATCATTCTGCGCACC 59.327 47.619 5.66 0.00 0.00 5.01
1995 3657 1.401552 GCTAAATCATTCTGCGCACCA 59.598 47.619 5.66 0.00 0.00 4.17
2035 3709 2.350498 GTGGTACGGTTCAATCCAATCG 59.650 50.000 0.00 0.00 35.90 3.34
2090 3764 0.252103 AGGCGGAGGTGAAAGAGGTA 60.252 55.000 0.00 0.00 0.00 3.08
2091 3765 0.108281 GGCGGAGGTGAAAGAGGTAC 60.108 60.000 0.00 0.00 0.00 3.34
2092 3766 0.108281 GCGGAGGTGAAAGAGGTACC 60.108 60.000 2.73 2.73 34.68 3.34
2093 3767 0.172803 CGGAGGTGAAAGAGGTACCG 59.827 60.000 6.18 0.00 39.46 4.02
2094 3768 0.108281 GGAGGTGAAAGAGGTACCGC 60.108 60.000 7.70 7.70 39.46 5.68
2095 3769 0.108281 GAGGTGAAAGAGGTACCGCC 60.108 60.000 12.54 5.62 39.46 6.13
2108 3782 2.359214 GGTACCGCCACTACTACTTACC 59.641 54.545 0.00 0.00 37.17 2.85
2211 3891 8.576442 AGTACAAATTCTTCCATTTTGGTAGTG 58.424 33.333 0.00 0.00 39.03 2.74
2227 3910 4.586001 TGGTAGTGGTAGAATATTCGGACC 59.414 45.833 24.80 24.80 38.08 4.46
2314 3997 1.769098 CGCTCCAGGATTCACGCATG 61.769 60.000 0.00 0.00 0.00 4.06
2408 4091 1.002069 AGAAACCATCATCCCTGGCA 58.998 50.000 0.00 0.00 37.27 4.92
2409 4092 1.064166 AGAAACCATCATCCCTGGCAG 60.064 52.381 7.75 7.75 37.27 4.85
2439 4122 0.804989 CCACGCACCAATCTCTTTCC 59.195 55.000 0.00 0.00 0.00 3.13
2472 4157 2.712057 TCGTTCTAGAAACACGGGAC 57.288 50.000 6.78 0.00 34.61 4.46
2473 4158 4.096759 TTTCGTTCTAGAAACACGGGACG 61.097 47.826 6.78 4.86 45.99 4.79
2534 4219 0.969894 AGTCAGTCGTGAAGGGAAGG 59.030 55.000 0.00 0.00 33.27 3.46
2664 4350 5.168569 TCTATTGTCTCCGTTGTTGTGATC 58.831 41.667 0.00 0.00 0.00 2.92
2685 4371 1.544246 GTGACATTGTGTAAAGGGCCC 59.456 52.381 16.46 16.46 0.00 5.80
2703 4389 1.473080 CCCAGCCAGGTTGTGTTTTTG 60.473 52.381 2.14 0.00 34.66 2.44
2802 4489 4.577693 TGTTTCCAGATCATCATGCTAAGC 59.422 41.667 0.00 0.00 0.00 3.09
2936 4624 2.125512 CCTTCTGGCTTCCCGTCG 60.126 66.667 0.00 0.00 0.00 5.12
2976 4667 6.757947 CCTTGAAATTTTGCTTCTCAAGACAA 59.242 34.615 13.05 0.00 43.65 3.18
2987 4678 6.989759 TGCTTCTCAAGACAACAACACTATTA 59.010 34.615 0.00 0.00 0.00 0.98
2988 4679 7.042051 TGCTTCTCAAGACAACAACACTATTAC 60.042 37.037 0.00 0.00 0.00 1.89
2990 4681 9.692749 CTTCTCAAGACAACAACACTATTACTA 57.307 33.333 0.00 0.00 0.00 1.82
3016 4707 4.915704 TGCTACTGAAAAACAAAGTTCCG 58.084 39.130 0.00 0.00 0.00 4.30
3017 4708 4.396790 TGCTACTGAAAAACAAAGTTCCGT 59.603 37.500 0.00 0.00 0.00 4.69
3018 4709 4.968181 GCTACTGAAAAACAAAGTTCCGTC 59.032 41.667 0.00 0.00 0.00 4.79
3019 4710 5.220796 GCTACTGAAAAACAAAGTTCCGTCT 60.221 40.000 0.00 0.00 0.00 4.18
3020 4711 6.018507 GCTACTGAAAAACAAAGTTCCGTCTA 60.019 38.462 0.00 0.00 0.00 2.59
3021 4712 6.937436 ACTGAAAAACAAAGTTCCGTCTAT 57.063 33.333 0.00 0.00 0.00 1.98
3022 4713 7.329588 ACTGAAAAACAAAGTTCCGTCTATT 57.670 32.000 0.00 0.00 0.00 1.73
3023 4714 7.415229 ACTGAAAAACAAAGTTCCGTCTATTC 58.585 34.615 0.00 0.00 0.00 1.75
3024 4715 6.731164 TGAAAAACAAAGTTCCGTCTATTCC 58.269 36.000 0.00 0.00 0.00 3.01
3025 4716 6.319152 TGAAAAACAAAGTTCCGTCTATTCCA 59.681 34.615 0.00 0.00 0.00 3.53
3026 4717 6.894339 AAAACAAAGTTCCGTCTATTCCAT 57.106 33.333 0.00 0.00 0.00 3.41
3027 4718 6.496338 AAACAAAGTTCCGTCTATTCCATC 57.504 37.500 0.00 0.00 0.00 3.51
3028 4719 5.160607 ACAAAGTTCCGTCTATTCCATCA 57.839 39.130 0.00 0.00 0.00 3.07
3029 4720 4.935808 ACAAAGTTCCGTCTATTCCATCAC 59.064 41.667 0.00 0.00 0.00 3.06
3030 4721 5.178797 CAAAGTTCCGTCTATTCCATCACT 58.821 41.667 0.00 0.00 0.00 3.41
3031 4722 6.070995 ACAAAGTTCCGTCTATTCCATCACTA 60.071 38.462 0.00 0.00 0.00 2.74
3032 4723 6.732896 AAGTTCCGTCTATTCCATCACTAT 57.267 37.500 0.00 0.00 0.00 2.12
3033 4724 6.334102 AGTTCCGTCTATTCCATCACTATC 57.666 41.667 0.00 0.00 0.00 2.08
3034 4725 5.244178 AGTTCCGTCTATTCCATCACTATCC 59.756 44.000 0.00 0.00 0.00 2.59
3035 4726 4.999310 TCCGTCTATTCCATCACTATCCT 58.001 43.478 0.00 0.00 0.00 3.24
3036 4727 5.010933 TCCGTCTATTCCATCACTATCCTC 58.989 45.833 0.00 0.00 0.00 3.71
3037 4728 5.013547 CCGTCTATTCCATCACTATCCTCT 58.986 45.833 0.00 0.00 0.00 3.69
3038 4729 5.105957 CCGTCTATTCCATCACTATCCTCTG 60.106 48.000 0.00 0.00 0.00 3.35
3039 4730 5.105957 CGTCTATTCCATCACTATCCTCTGG 60.106 48.000 0.00 0.00 0.00 3.86
3040 4731 5.777732 GTCTATTCCATCACTATCCTCTGGT 59.222 44.000 0.00 0.00 0.00 4.00
3041 4732 6.268847 GTCTATTCCATCACTATCCTCTGGTT 59.731 42.308 0.00 0.00 0.00 3.67
3042 4733 5.983333 ATTCCATCACTATCCTCTGGTTT 57.017 39.130 0.00 0.00 0.00 3.27
3043 4734 5.359194 TTCCATCACTATCCTCTGGTTTC 57.641 43.478 0.00 0.00 0.00 2.78
3044 4735 3.711704 TCCATCACTATCCTCTGGTTTCC 59.288 47.826 0.00 0.00 0.00 3.13
3045 4736 3.713764 CCATCACTATCCTCTGGTTTCCT 59.286 47.826 0.00 0.00 0.00 3.36
3046 4737 4.202305 CCATCACTATCCTCTGGTTTCCTC 60.202 50.000 0.00 0.00 0.00 3.71
3047 4738 3.375699 TCACTATCCTCTGGTTTCCTCC 58.624 50.000 0.00 0.00 0.00 4.30
3048 4739 3.107601 CACTATCCTCTGGTTTCCTCCA 58.892 50.000 0.00 0.00 36.00 3.86
3049 4740 3.519510 CACTATCCTCTGGTTTCCTCCAA 59.480 47.826 0.00 0.00 37.01 3.53
3050 4741 4.019321 CACTATCCTCTGGTTTCCTCCAAA 60.019 45.833 0.00 0.00 37.01 3.28
3051 4742 4.790790 ACTATCCTCTGGTTTCCTCCAAAT 59.209 41.667 0.00 0.00 37.01 2.32
3052 4743 3.721087 TCCTCTGGTTTCCTCCAAATC 57.279 47.619 0.00 0.00 37.01 2.17
3053 4744 3.260205 TCCTCTGGTTTCCTCCAAATCT 58.740 45.455 0.00 0.00 37.01 2.40
3054 4745 3.657727 TCCTCTGGTTTCCTCCAAATCTT 59.342 43.478 0.00 0.00 37.01 2.40
3055 4746 3.760684 CCTCTGGTTTCCTCCAAATCTTG 59.239 47.826 0.00 0.00 37.01 3.02
3078 4769 5.591067 TGGGTGTACTACTGAAAAACAAAGG 59.409 40.000 0.00 0.00 0.00 3.11
3079 4770 5.506815 GGGTGTACTACTGAAAAACAAAGGC 60.507 44.000 0.00 0.00 0.00 4.35
3081 4772 4.581409 TGTACTACTGAAAAACAAAGGCCC 59.419 41.667 0.00 0.00 0.00 5.80
3084 4775 1.828595 ACTGAAAAACAAAGGCCCGTT 59.171 42.857 0.00 0.00 0.00 4.44
3092 4783 5.994887 AAACAAAGGCCCGTTTATTTTTC 57.005 34.783 12.51 0.00 33.68 2.29
3100 4791 4.234574 GCCCGTTTATTTTTCTTCCTGTG 58.765 43.478 0.00 0.00 0.00 3.66
3108 4799 9.750125 GTTTATTTTTCTTCCTGTGAGTCAAAT 57.250 29.630 0.00 0.00 0.00 2.32
3109 4800 9.748708 TTTATTTTTCTTCCTGTGAGTCAAATG 57.251 29.630 0.00 0.00 0.00 2.32
3110 4801 4.836125 TTTCTTCCTGTGAGTCAAATGC 57.164 40.909 0.00 0.00 0.00 3.56
3111 4802 3.777106 TCTTCCTGTGAGTCAAATGCT 57.223 42.857 0.00 0.00 0.00 3.79
3112 4803 3.405831 TCTTCCTGTGAGTCAAATGCTG 58.594 45.455 0.00 0.00 0.00 4.41
3113 4804 1.527034 TCCTGTGAGTCAAATGCTGC 58.473 50.000 0.00 0.00 0.00 5.25
3114 4805 0.524862 CCTGTGAGTCAAATGCTGCC 59.475 55.000 0.00 0.00 0.00 4.85
3115 4806 1.241165 CTGTGAGTCAAATGCTGCCA 58.759 50.000 0.00 0.00 0.00 4.92
3116 4807 1.199327 CTGTGAGTCAAATGCTGCCAG 59.801 52.381 0.00 0.00 0.00 4.85
3117 4808 0.109412 GTGAGTCAAATGCTGCCAGC 60.109 55.000 10.45 10.45 42.82 4.85
3118 4809 1.246056 TGAGTCAAATGCTGCCAGCC 61.246 55.000 15.29 0.00 41.51 4.85
3127 4818 4.340246 CTGCCAGCCTGCCACTGA 62.340 66.667 0.00 0.00 37.32 3.41
3153 4844 6.665680 TCTCCTCCAGCAAATATCCTAGATAC 59.334 42.308 0.00 0.00 0.00 2.24
3154 4845 6.565974 TCCTCCAGCAAATATCCTAGATACT 58.434 40.000 0.00 0.00 0.00 2.12
3155 4846 7.709601 TCCTCCAGCAAATATCCTAGATACTA 58.290 38.462 0.00 0.00 0.00 1.82
3156 4847 7.616150 TCCTCCAGCAAATATCCTAGATACTAC 59.384 40.741 0.00 0.00 0.00 2.73
3199 4890 3.570540 TCTGTCCTCCTCCACATATCTG 58.429 50.000 0.00 0.00 0.00 2.90
3300 4991 4.334552 TCTCAATGGTCAATGCTTTGCTA 58.665 39.130 7.44 2.13 32.61 3.49
3343 5034 6.348050 GCTCTAGCTACATTCCAAACATATGC 60.348 42.308 1.58 0.00 38.21 3.14
3376 5074 8.403236 GCAGTTATTCGTAATAAAGGAAACCAT 58.597 33.333 0.00 0.00 35.71 3.55
3381 5079 3.951680 CGTAATAAAGGAAACCATGGGCT 59.048 43.478 18.09 1.35 0.00 5.19
3431 5129 9.319143 AGAGACATCATTAATAACTGTACTTGC 57.681 33.333 0.00 0.00 0.00 4.01
3462 5160 1.140052 TGTTGGTTCGCTGAAGAAGGA 59.860 47.619 0.00 0.00 0.00 3.36
3487 5185 5.703876 CTTCCTCTTTAAGCAACATCAACC 58.296 41.667 0.00 0.00 0.00 3.77
3505 5203 8.100791 ACATCAACCTAGTAGATGCAGTAAAAA 58.899 33.333 13.23 0.00 0.00 1.94
3654 5352 7.038659 GCAGAATATCAAGTGTAGTTCAGTCT 58.961 38.462 0.00 0.00 0.00 3.24
3662 5360 7.500992 TCAAGTGTAGTTCAGTCTGAATCTTT 58.499 34.615 18.08 7.60 38.79 2.52
3675 5373 8.248945 CAGTCTGAATCTTTTCATAATTTGCCT 58.751 33.333 0.00 0.00 40.95 4.75
3774 5472 4.299586 TGCCATCCACACTGAAATCTTA 57.700 40.909 0.00 0.00 0.00 2.10
3775 5473 4.009675 TGCCATCCACACTGAAATCTTAC 58.990 43.478 0.00 0.00 0.00 2.34
3776 5474 4.009675 GCCATCCACACTGAAATCTTACA 58.990 43.478 0.00 0.00 0.00 2.41
3777 5475 4.095483 GCCATCCACACTGAAATCTTACAG 59.905 45.833 0.00 0.00 39.65 2.74
3778 5476 5.491070 CCATCCACACTGAAATCTTACAGA 58.509 41.667 0.00 0.00 37.54 3.41
3779 5477 6.118170 CCATCCACACTGAAATCTTACAGAT 58.882 40.000 0.00 0.00 36.28 2.90
3780 5478 6.600822 CCATCCACACTGAAATCTTACAGATT 59.399 38.462 0.00 0.00 46.22 2.40
3826 5524 1.152694 TGTTGCTTGCAGGAGCCTT 60.153 52.632 7.90 0.00 42.01 4.35
3840 5538 3.921257 GCCTTTGCTGCCTCATTTT 57.079 47.368 0.00 0.00 33.53 1.82
3841 5539 1.718396 GCCTTTGCTGCCTCATTTTC 58.282 50.000 0.00 0.00 33.53 2.29
3842 5540 1.274447 GCCTTTGCTGCCTCATTTTCT 59.726 47.619 0.00 0.00 33.53 2.52
3843 5541 2.673326 GCCTTTGCTGCCTCATTTTCTC 60.673 50.000 0.00 0.00 33.53 2.87
3844 5542 2.094338 CCTTTGCTGCCTCATTTTCTCC 60.094 50.000 0.00 0.00 0.00 3.71
3845 5543 2.592102 TTGCTGCCTCATTTTCTCCT 57.408 45.000 0.00 0.00 0.00 3.69
3846 5544 2.119801 TGCTGCCTCATTTTCTCCTC 57.880 50.000 0.00 0.00 0.00 3.71
3847 5545 1.632409 TGCTGCCTCATTTTCTCCTCT 59.368 47.619 0.00 0.00 0.00 3.69
3848 5546 2.287769 GCTGCCTCATTTTCTCCTCTC 58.712 52.381 0.00 0.00 0.00 3.20
3849 5547 2.355513 GCTGCCTCATTTTCTCCTCTCA 60.356 50.000 0.00 0.00 0.00 3.27
3850 5548 3.871463 GCTGCCTCATTTTCTCCTCTCAA 60.871 47.826 0.00 0.00 0.00 3.02
3851 5549 3.940221 CTGCCTCATTTTCTCCTCTCAAG 59.060 47.826 0.00 0.00 0.00 3.02
3852 5550 2.682352 GCCTCATTTTCTCCTCTCAAGC 59.318 50.000 0.00 0.00 0.00 4.01
3853 5551 3.871463 GCCTCATTTTCTCCTCTCAAGCA 60.871 47.826 0.00 0.00 0.00 3.91
3854 5552 4.330250 CCTCATTTTCTCCTCTCAAGCAA 58.670 43.478 0.00 0.00 0.00 3.91
3855 5553 4.395542 CCTCATTTTCTCCTCTCAAGCAAG 59.604 45.833 0.00 0.00 0.00 4.01
3856 5554 4.978099 TCATTTTCTCCTCTCAAGCAAGT 58.022 39.130 0.00 0.00 0.00 3.16
3857 5555 5.380043 TCATTTTCTCCTCTCAAGCAAGTT 58.620 37.500 0.00 0.00 0.00 2.66
3858 5556 6.533730 TCATTTTCTCCTCTCAAGCAAGTTA 58.466 36.000 0.00 0.00 0.00 2.24
3859 5557 7.170965 TCATTTTCTCCTCTCAAGCAAGTTAT 58.829 34.615 0.00 0.00 0.00 1.89
3860 5558 8.321353 TCATTTTCTCCTCTCAAGCAAGTTATA 58.679 33.333 0.00 0.00 0.00 0.98
3861 5559 9.118300 CATTTTCTCCTCTCAAGCAAGTTATAT 57.882 33.333 0.00 0.00 0.00 0.86
3862 5560 9.692325 ATTTTCTCCTCTCAAGCAAGTTATATT 57.308 29.630 0.00 0.00 0.00 1.28
3863 5561 9.520515 TTTTCTCCTCTCAAGCAAGTTATATTT 57.479 29.630 0.00 0.00 0.00 1.40
3864 5562 8.498054 TTCTCCTCTCAAGCAAGTTATATTTG 57.502 34.615 0.00 0.00 0.00 2.32
3865 5563 7.050377 TCTCCTCTCAAGCAAGTTATATTTGG 58.950 38.462 0.00 0.00 0.00 3.28
3866 5564 6.122277 TCCTCTCAAGCAAGTTATATTTGGG 58.878 40.000 0.00 0.00 0.00 4.12
3867 5565 5.888161 CCTCTCAAGCAAGTTATATTTGGGT 59.112 40.000 0.00 0.00 0.00 4.51
3868 5566 7.054124 CCTCTCAAGCAAGTTATATTTGGGTA 58.946 38.462 0.00 0.00 0.00 3.69
3869 5567 7.227512 CCTCTCAAGCAAGTTATATTTGGGTAG 59.772 40.741 0.00 0.00 0.00 3.18
3870 5568 7.857456 TCTCAAGCAAGTTATATTTGGGTAGA 58.143 34.615 0.00 0.00 0.00 2.59
3871 5569 8.325787 TCTCAAGCAAGTTATATTTGGGTAGAA 58.674 33.333 0.00 0.00 0.00 2.10
3872 5570 8.276252 TCAAGCAAGTTATATTTGGGTAGAAC 57.724 34.615 0.00 0.00 0.00 3.01
3873 5571 8.107095 TCAAGCAAGTTATATTTGGGTAGAACT 58.893 33.333 0.00 0.00 37.63 3.01
3874 5572 8.739972 CAAGCAAGTTATATTTGGGTAGAACTT 58.260 33.333 1.98 1.98 43.22 2.66
3875 5573 8.879427 AGCAAGTTATATTTGGGTAGAACTTT 57.121 30.769 4.48 0.00 41.01 2.66
3876 5574 9.309224 AGCAAGTTATATTTGGGTAGAACTTTT 57.691 29.630 4.48 0.00 41.01 2.27
3916 5614 1.971167 GTCCCGCCTGATGTTGCAA 60.971 57.895 0.00 0.00 0.00 4.08
3956 5655 6.293407 CGGCACATTACCCTAATCAAATACAG 60.293 42.308 0.00 0.00 0.00 2.74
4040 5739 7.775053 ATTACTTTTGACCTTTCATTAGGCA 57.225 32.000 0.00 0.00 38.99 4.75
4125 5824 3.034635 CCTCACTTCTGTGCTATACCCT 58.965 50.000 0.00 0.00 43.49 4.34
4133 5832 6.270000 ACTTCTGTGCTATACCCTATATGCAA 59.730 38.462 0.00 0.00 31.52 4.08
4150 5849 9.754382 CTATATGCAATGCTTTAGTTCCATTTT 57.246 29.630 6.82 0.00 0.00 1.82
4176 5875 9.701098 TTATTTCTTATGTGTGTACGAGTCTTT 57.299 29.630 0.00 0.00 0.00 2.52
4177 5876 7.402811 TTTCTTATGTGTGTACGAGTCTTTG 57.597 36.000 0.00 0.00 0.00 2.77
4178 5877 4.921515 TCTTATGTGTGTACGAGTCTTTGC 59.078 41.667 0.00 0.00 0.00 3.68
4179 5878 2.882927 TGTGTGTACGAGTCTTTGCT 57.117 45.000 0.00 0.00 0.00 3.91
4180 5879 3.994204 TGTGTGTACGAGTCTTTGCTA 57.006 42.857 0.00 0.00 0.00 3.49
4181 5880 3.897325 TGTGTGTACGAGTCTTTGCTAG 58.103 45.455 0.00 0.00 0.00 3.42
4182 5881 3.243336 GTGTGTACGAGTCTTTGCTAGG 58.757 50.000 0.00 0.00 0.00 3.02
4183 5882 2.260481 GTGTACGAGTCTTTGCTAGGC 58.740 52.381 0.00 0.00 0.00 3.93
4184 5883 2.094649 GTGTACGAGTCTTTGCTAGGCT 60.095 50.000 0.00 0.00 42.97 4.58
4185 5884 2.094700 TGTACGAGTCTTTGCTAGGCTG 60.095 50.000 0.00 0.00 39.47 4.85
4186 5885 0.969894 ACGAGTCTTTGCTAGGCTGT 59.030 50.000 0.00 0.00 39.47 4.40
4187 5886 1.337260 ACGAGTCTTTGCTAGGCTGTG 60.337 52.381 0.00 0.00 39.47 3.66
4188 5887 1.082690 GAGTCTTTGCTAGGCTGTGC 58.917 55.000 0.00 1.84 39.47 4.57
4189 5888 0.689623 AGTCTTTGCTAGGCTGTGCT 59.310 50.000 13.81 0.00 37.45 4.40
4190 5889 1.902508 AGTCTTTGCTAGGCTGTGCTA 59.097 47.619 13.81 5.38 37.45 3.49
4191 5890 2.503356 AGTCTTTGCTAGGCTGTGCTAT 59.497 45.455 13.81 0.00 37.45 2.97
4192 5891 3.706594 AGTCTTTGCTAGGCTGTGCTATA 59.293 43.478 13.81 0.07 37.45 1.31
4193 5892 3.804873 GTCTTTGCTAGGCTGTGCTATAC 59.195 47.826 13.81 6.15 0.00 1.47
4194 5893 2.910688 TTGCTAGGCTGTGCTATACC 57.089 50.000 13.81 0.00 0.00 2.73
4195 5894 1.048601 TGCTAGGCTGTGCTATACCC 58.951 55.000 13.81 0.00 0.00 3.69
4196 5895 1.343069 GCTAGGCTGTGCTATACCCT 58.657 55.000 0.00 0.00 0.00 4.34
4197 5896 2.158370 TGCTAGGCTGTGCTATACCCTA 60.158 50.000 13.81 0.00 0.00 3.53
4198 5897 3.100671 GCTAGGCTGTGCTATACCCTAT 58.899 50.000 0.00 0.00 0.00 2.57
4199 5898 4.264217 TGCTAGGCTGTGCTATACCCTATA 60.264 45.833 13.81 0.00 0.00 1.31
4200 5899 4.896482 GCTAGGCTGTGCTATACCCTATAT 59.104 45.833 0.00 0.00 0.00 0.86
4201 5900 5.221342 GCTAGGCTGTGCTATACCCTATATG 60.221 48.000 0.00 0.00 0.00 1.78
4202 5901 3.452627 AGGCTGTGCTATACCCTATATGC 59.547 47.826 0.00 0.00 0.00 3.14
4203 5902 3.197766 GGCTGTGCTATACCCTATATGCA 59.802 47.826 0.00 0.00 0.00 3.96
4204 5903 4.323485 GGCTGTGCTATACCCTATATGCAA 60.323 45.833 0.00 0.00 31.52 4.08
4205 5904 5.431765 GCTGTGCTATACCCTATATGCAAT 58.568 41.667 0.00 0.00 31.52 3.56
4206 5905 5.295292 GCTGTGCTATACCCTATATGCAATG 59.705 44.000 0.00 0.00 31.52 2.82
4207 5906 5.185454 TGTGCTATACCCTATATGCAATGC 58.815 41.667 0.00 0.00 31.52 3.56
4208 5907 5.045651 TGTGCTATACCCTATATGCAATGCT 60.046 40.000 6.82 0.00 31.52 3.79
4209 5908 5.882557 GTGCTATACCCTATATGCAATGCTT 59.117 40.000 6.82 2.25 31.52 3.91
4210 5909 6.375455 GTGCTATACCCTATATGCAATGCTTT 59.625 38.462 6.82 0.00 31.52 3.51
4211 5910 7.552687 GTGCTATACCCTATATGCAATGCTTTA 59.447 37.037 6.82 0.00 31.52 1.85
4212 5911 7.770433 TGCTATACCCTATATGCAATGCTTTAG 59.230 37.037 6.82 4.90 0.00 1.85
4213 5912 7.770897 GCTATACCCTATATGCAATGCTTTAGT 59.229 37.037 6.82 0.00 0.00 2.24
4214 5913 9.672673 CTATACCCTATATGCAATGCTTTAGTT 57.327 33.333 6.82 0.00 0.00 2.24
4215 5914 6.884280 ACCCTATATGCAATGCTTTAGTTC 57.116 37.500 6.82 0.00 0.00 3.01
4216 5915 5.770162 ACCCTATATGCAATGCTTTAGTTCC 59.230 40.000 6.82 0.00 0.00 3.62
4217 5916 5.769662 CCCTATATGCAATGCTTTAGTTCCA 59.230 40.000 6.82 0.00 0.00 3.53
4218 5917 6.435277 CCCTATATGCAATGCTTTAGTTCCAT 59.565 38.462 6.82 0.00 0.00 3.41
4219 5918 7.039504 CCCTATATGCAATGCTTTAGTTCCATT 60.040 37.037 6.82 0.00 0.00 3.16
4220 5919 8.362639 CCTATATGCAATGCTTTAGTTCCATTT 58.637 33.333 6.82 0.00 0.00 2.32
4221 5920 9.754382 CTATATGCAATGCTTTAGTTCCATTTT 57.246 29.630 6.82 0.00 0.00 1.82
4225 5924 8.845413 TGCAATGCTTTAGTTCCATTTTTATT 57.155 26.923 6.82 0.00 0.00 1.40
4226 5925 9.282569 TGCAATGCTTTAGTTCCATTTTTATTT 57.717 25.926 6.82 0.00 0.00 1.40
4227 5926 9.759259 GCAATGCTTTAGTTCCATTTTTATTTC 57.241 29.630 0.00 0.00 0.00 2.17
4236 5935 8.687824 AGTTCCATTTTTATTTCTTATGTGCG 57.312 30.769 0.00 0.00 0.00 5.34
4237 5936 8.303876 AGTTCCATTTTTATTTCTTATGTGCGT 58.696 29.630 0.00 0.00 0.00 5.24
4238 5937 9.562583 GTTCCATTTTTATTTCTTATGTGCGTA 57.437 29.630 0.00 0.00 0.00 4.42
4239 5938 9.562583 TTCCATTTTTATTTCTTATGTGCGTAC 57.437 29.630 0.00 0.00 0.00 3.67
4240 5939 7.906010 TCCATTTTTATTTCTTATGTGCGTACG 59.094 33.333 11.84 11.84 0.00 3.67
4241 5940 7.906010 CCATTTTTATTTCTTATGTGCGTACGA 59.094 33.333 21.65 0.00 0.00 3.43
4242 5941 8.933955 CATTTTTATTTCTTATGTGCGTACGAG 58.066 33.333 21.65 6.23 0.00 4.18
4243 5942 7.585286 TTTTATTTCTTATGTGCGTACGAGT 57.415 32.000 21.65 3.38 0.00 4.18
4244 5943 6.801367 TTATTTCTTATGTGCGTACGAGTC 57.199 37.500 21.65 8.57 0.00 3.36
4245 5944 4.430137 TTTCTTATGTGCGTACGAGTCT 57.570 40.909 21.65 2.67 0.00 3.24
4246 5945 4.430137 TTCTTATGTGCGTACGAGTCTT 57.570 40.909 21.65 8.63 0.00 3.01
4409 6108 0.394216 GCCATGTGTGCCACCAGATA 60.394 55.000 0.00 0.00 32.73 1.98
4450 6149 2.154462 CTTCTACAGTTTGGTGGGCTG 58.846 52.381 0.00 0.00 36.41 4.85
4461 6160 0.310854 GGTGGGCTGTTTGACTTTCG 59.689 55.000 0.00 0.00 0.00 3.46
4503 6202 2.222640 CGTTAACCTGCCGTGTATTTCG 60.223 50.000 0.00 0.00 0.00 3.46
4603 6302 5.472137 GCCTTTCATTGTTAACTCCACTACA 59.528 40.000 7.22 0.00 0.00 2.74
4772 6472 3.691020 GGATAGGCCAAATTGATGGGACA 60.691 47.826 5.01 0.00 41.01 4.02
4936 6636 0.102481 ACGTGAACTATAGCCAGGCG 59.898 55.000 5.55 0.00 0.00 5.52
5085 6785 3.902218 CACTGTGGATTGGGATAATGGT 58.098 45.455 0.00 0.00 0.00 3.55
5369 7069 4.142271 TGCGAAATTAATCCATGTCCAACC 60.142 41.667 0.00 0.00 0.00 3.77
5461 7163 6.256757 GGAAAAGATATCTCTCCACACTTTCG 59.743 42.308 21.22 0.00 28.25 3.46
5621 7335 3.511477 TGGAGGGGACATAATAGAGCTC 58.489 50.000 5.27 5.27 0.00 4.09
5685 7399 1.202486 TCTGACGTCCCGATAATTGGC 60.202 52.381 14.12 0.00 0.00 4.52
5704 7419 2.595386 GCGCAGTTAGAAAATGGGTTG 58.405 47.619 0.30 0.00 0.00 3.77
5715 7430 5.906073 AGAAAATGGGTTGTGAACTTGAAG 58.094 37.500 0.00 0.00 0.00 3.02
5716 7431 5.422012 AGAAAATGGGTTGTGAACTTGAAGT 59.578 36.000 0.00 0.00 0.00 3.01
5927 7657 1.272769 GGTCACATATACTCCCTCCGC 59.727 57.143 0.00 0.00 0.00 5.54
5942 7672 3.447229 CCCTCCGCTCCAAAATAATTGTT 59.553 43.478 0.00 0.00 0.00 2.83
6013 7743 7.609532 GGAACGGAAGGAGTAGTATATAAGCTA 59.390 40.741 0.00 0.00 0.00 3.32
6053 7783 3.197549 AGAGGATGAGAGAAGCTGAAACC 59.802 47.826 0.00 0.00 0.00 3.27
6066 7796 3.523564 AGCTGAAACCTGGTACCATACAT 59.476 43.478 16.75 2.33 0.00 2.29
6120 7850 4.822026 GTCAGCTGACAGTAATAGTTGGT 58.178 43.478 36.23 0.00 44.18 3.67
6166 7910 7.831691 AGCTCTTCTCATCAGCTAACTAATA 57.168 36.000 0.00 0.00 41.84 0.98
6272 8016 4.989279 AATGTGATCATTAGTTGTGCCC 57.011 40.909 0.00 0.00 41.76 5.36
6295 8039 6.429692 CCCAATGTGTCTGTTATCAACTTACA 59.570 38.462 0.00 0.00 0.00 2.41
6301 8045 6.736853 GTGTCTGTTATCAACTTACAATTCGC 59.263 38.462 0.00 0.00 31.74 4.70
6317 8061 5.648092 ACAATTCGCACTCTAGGCTAATTTT 59.352 36.000 0.00 0.00 35.32 1.82
6475 8235 4.522405 AGATTCCTCAGATGAGACGTATGG 59.478 45.833 11.44 0.00 44.74 2.74
6548 8308 1.149288 AGAGGAGTGGAGGGTGTAACA 59.851 52.381 0.00 0.00 39.98 2.41
6731 8491 7.468141 TGTTATTCATGGAGAGCGTCTATAT 57.532 36.000 0.00 0.00 0.00 0.86
6815 8575 9.490663 CTCTTTACCTGAATAATTTTGTAAGCG 57.509 33.333 0.00 0.00 0.00 4.68
7072 8832 2.298163 ACCGACATTCCGTTACAAGAGT 59.702 45.455 0.00 0.00 0.00 3.24
7101 8861 7.148255 GCAGTATATGTTTGTTCAATGTCCAGA 60.148 37.037 0.00 0.00 0.00 3.86
7301 9061 2.599645 CTTCAGCACCCGGGGATGAG 62.600 65.000 27.92 16.30 0.00 2.90
7340 9100 1.472552 CGACAACTTGGTGACTGGACA 60.473 52.381 0.00 0.00 0.00 4.02
7370 9130 2.526120 GCGTGTATTCTCCGCAGCC 61.526 63.158 0.00 0.00 46.26 4.85
7415 9175 0.176910 GTGGCCTCCTTAGAGCAGAC 59.823 60.000 3.32 0.00 38.96 3.51
7685 9445 4.843728 AGAGGATGTAAGCGAATTTTCCA 58.156 39.130 0.00 0.00 0.00 3.53
7749 9516 9.746457 ACAGACTAGACTGCAATCTATATCATA 57.254 33.333 20.07 0.00 41.06 2.15
7780 9562 3.195661 CCCTAACCGCATGAAGAACTAC 58.804 50.000 0.00 0.00 0.00 2.73
7845 9627 9.830975 AATTTGCCAAAACTATGAAAAACTAGT 57.169 25.926 0.00 0.00 0.00 2.57
7908 9690 5.640147 TCAACTGATCTTTACCCACCAATT 58.360 37.500 0.00 0.00 0.00 2.32
8007 9789 7.990314 ACAACAAATGCTTACTTTTATTGGGTT 59.010 29.630 0.00 0.00 33.76 4.11
8091 9873 7.056844 AGATCAAAGGGTAACTATCAGCTAC 57.943 40.000 0.00 0.00 0.00 3.58
8138 9922 5.933187 TGCTCGCAATTTAGTTCTTACAA 57.067 34.783 0.00 0.00 0.00 2.41
8257 10041 1.614903 CAAGCTCTCAACCATGCCAAA 59.385 47.619 0.00 0.00 0.00 3.28
8295 10079 3.982058 GTGTCTGGAACTCGAGTAAGTTG 59.018 47.826 20.39 8.66 39.55 3.16
8919 10721 3.829272 CTTTGCTTGTTGCGCGCCT 62.829 57.895 30.77 0.00 46.63 5.52
8981 10783 2.813908 GCACCGGTCGCCAGTTAG 60.814 66.667 2.59 0.00 0.00 2.34
8996 10798 0.883833 GTTAGGCAATGCACACTGCT 59.116 50.000 7.79 0.00 45.31 4.24
9002 10804 1.860676 CAATGCACACTGCTTTGCTT 58.139 45.000 9.19 0.00 46.45 3.91
9003 10805 3.015934 CAATGCACACTGCTTTGCTTA 57.984 42.857 9.19 0.00 46.45 3.09
9012 10814 4.627467 ACACTGCTTTGCTTAAGATACTCG 59.373 41.667 6.67 0.00 35.80 4.18
9153 10955 1.606350 GCGGAGTCGACACAAAGACG 61.606 60.000 19.50 10.91 41.86 4.18
9230 11032 0.625849 ACAATAGGGAAGGCCACCAG 59.374 55.000 18.41 6.41 35.15 4.00
9304 11106 4.804108 CCACAAGTTTGTTTGTTCTCACA 58.196 39.130 0.00 0.00 39.17 3.58
9390 11194 9.216117 TCTTCTCTTTGTATGTAAAGTTTAGGC 57.784 33.333 0.00 0.00 38.49 3.93
9451 11255 7.190920 ACTACATTAGAGCTTGTGTTGTTTC 57.809 36.000 0.00 0.00 28.78 2.78
9461 11265 1.203523 TGTGTTGTTTCTTGTGCCACC 59.796 47.619 0.00 0.00 0.00 4.61
9492 11296 2.766345 TGCATTCTTTTTCATGGGGC 57.234 45.000 0.00 0.00 0.00 5.80
9510 11314 0.792640 GCTGTGTGATGTTGAGACCG 59.207 55.000 0.00 0.00 0.00 4.79
9533 11337 4.181309 TGCTCGTTTTTGTTTGGACTTT 57.819 36.364 0.00 0.00 0.00 2.66
9534 11338 3.923461 TGCTCGTTTTTGTTTGGACTTTG 59.077 39.130 0.00 0.00 0.00 2.77
9535 11339 3.924073 GCTCGTTTTTGTTTGGACTTTGT 59.076 39.130 0.00 0.00 0.00 2.83
9536 11340 4.201580 GCTCGTTTTTGTTTGGACTTTGTG 60.202 41.667 0.00 0.00 0.00 3.33
9537 11341 4.872664 TCGTTTTTGTTTGGACTTTGTGT 58.127 34.783 0.00 0.00 0.00 3.72
9538 11342 4.681942 TCGTTTTTGTTTGGACTTTGTGTG 59.318 37.500 0.00 0.00 0.00 3.82
9558 11364 6.023435 GTGTGTATATGTTGCTGTTGATGTG 58.977 40.000 0.00 0.00 0.00 3.21
9574 11380 8.977267 TGTTGATGTGTGGAATATGATCATAA 57.023 30.769 19.03 0.05 0.00 1.90
9609 11416 2.204461 TTCTTCCTCCGCCACGACA 61.204 57.895 0.00 0.00 0.00 4.35
9673 11506 3.977579 CGTCAGAATTCATCGACGATGAT 59.022 43.478 34.20 23.70 46.52 2.45
9684 11517 8.729529 TTCATCGACGATGATAATCTAAGTTC 57.270 34.615 34.20 0.00 46.52 3.01
9742 11576 8.804743 CAAAACTGTAACACGACGATAATCTAT 58.195 33.333 0.00 0.00 0.00 1.98
9743 11577 7.909777 AACTGTAACACGACGATAATCTATG 57.090 36.000 0.00 0.00 0.00 2.23
9744 11578 7.024340 ACTGTAACACGACGATAATCTATGT 57.976 36.000 0.00 0.00 0.00 2.29
9746 11580 7.642978 ACTGTAACACGACGATAATCTATGTTC 59.357 37.037 0.00 0.00 31.65 3.18
9747 11581 7.700505 TGTAACACGACGATAATCTATGTTCT 58.299 34.615 0.00 0.00 31.65 3.01
9748 11582 8.829612 TGTAACACGACGATAATCTATGTTCTA 58.170 33.333 0.00 0.00 31.65 2.10
9808 11648 2.190578 CGGGATGCTCCACCTTCC 59.809 66.667 4.85 0.00 38.64 3.46
9810 11650 1.225704 GGGATGCTCCACCTTCCTG 59.774 63.158 4.85 0.00 38.64 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 4.666512 AGCAAATGAGTTGTTGGAGGTAT 58.333 39.130 0.00 0.00 39.63 2.73
62 63 1.798223 GTTTCTTTTGCGGGGAAATGC 59.202 47.619 0.00 0.00 32.71 3.56
138 139 6.659668 TGAATGGAAAATACGAATTGTGGGTA 59.340 34.615 0.00 0.00 0.00 3.69
277 440 4.120589 GTTCCACCGGAGAGAATATTCAC 58.879 47.826 17.56 11.26 31.21 3.18
310 473 2.404923 TTGGTTGACGAGGACAAACA 57.595 45.000 0.00 0.00 42.09 2.83
362 525 0.519519 TTGGCGTTAAAGATGCACGG 59.480 50.000 0.00 0.00 42.27 4.94
365 528 2.742053 GAGAGTTGGCGTTAAAGATGCA 59.258 45.455 0.00 0.00 42.27 3.96
403 566 2.466846 ACAAAACACGTCCAGACTACG 58.533 47.619 0.00 0.00 45.64 3.51
423 586 3.136443 GGATACAGGACCACATTGGATGA 59.864 47.826 0.00 0.00 40.96 2.92
433 596 1.119684 CATGGACGGATACAGGACCA 58.880 55.000 0.00 0.00 0.00 4.02
446 609 1.079503 GCACCTCTCGTTTCATGGAC 58.920 55.000 0.00 0.00 0.00 4.02
450 613 1.741770 GCGGCACCTCTCGTTTCAT 60.742 57.895 0.00 0.00 0.00 2.57
454 617 4.421479 CGAGCGGCACCTCTCGTT 62.421 66.667 18.53 0.00 44.95 3.85
499 1974 2.491152 CCATGCATTGCGTGTCCC 59.509 61.111 25.07 0.00 43.26 4.46
502 1977 2.990395 TGGCCATGCATTGCGTGT 60.990 55.556 25.07 2.96 43.26 4.49
508 1994 3.814268 GCGACGTGGCCATGCATT 61.814 61.111 25.30 5.44 0.00 3.56
566 2080 2.032549 CAGCTGAGGTTTCACTTTCACG 60.033 50.000 8.42 0.00 0.00 4.35
627 2156 0.249489 CTCCAGGAAATACGGGAGCG 60.249 60.000 0.00 0.00 40.37 5.03
630 2159 1.961394 CGATCTCCAGGAAATACGGGA 59.039 52.381 0.00 0.00 0.00 5.14
632 2161 1.605712 GCCGATCTCCAGGAAATACGG 60.606 57.143 15.45 15.45 41.63 4.02
680 2227 2.825861 TATCCCGGCCGTAAAAGATC 57.174 50.000 26.12 0.00 0.00 2.75
766 2337 2.598394 TCACCAGCCAGGCTTTGC 60.598 61.111 12.86 0.00 43.14 3.68
821 2392 4.435436 TCACTGGCTGCGGCGTAG 62.435 66.667 20.97 20.97 39.81 3.51
822 2393 4.435436 CTCACTGGCTGCGGCGTA 62.435 66.667 12.29 1.99 39.81 4.42
824 2395 4.435436 TACTCACTGGCTGCGGCG 62.435 66.667 12.29 0.51 39.81 6.46
825 2396 1.945354 TACTACTCACTGGCTGCGGC 61.945 60.000 9.72 9.72 37.82 6.53
826 2397 0.179134 GTACTACTCACTGGCTGCGG 60.179 60.000 0.00 0.00 0.00 5.69
827 2398 0.811915 AGTACTACTCACTGGCTGCG 59.188 55.000 0.00 0.00 0.00 5.18
828 2399 2.285827 CAGTACTACTCACTGGCTGC 57.714 55.000 0.00 0.00 39.80 5.25
837 2408 1.261089 CTACGCGCTCCAGTACTACTC 59.739 57.143 5.73 0.00 0.00 2.59
842 2413 0.527817 AATGCTACGCGCTCCAGTAC 60.528 55.000 5.73 0.00 40.11 2.73
847 2418 0.940047 GACCTAATGCTACGCGCTCC 60.940 60.000 5.73 0.00 40.11 4.70
848 2419 1.269444 CGACCTAATGCTACGCGCTC 61.269 60.000 5.73 0.00 40.11 5.03
872 2443 1.941812 CTCACGCAACAGTCCAACC 59.058 57.895 0.00 0.00 0.00 3.77
905 2476 2.285743 AAGGGGTGGGAGAGAGGC 60.286 66.667 0.00 0.00 0.00 4.70
907 2478 1.690985 GGGAAGGGGTGGGAGAGAG 60.691 68.421 0.00 0.00 0.00 3.20
972 2559 2.125753 GCAGAGCAGTCCGTCCAG 60.126 66.667 0.00 0.00 0.00 3.86
973 2560 3.695606 GGCAGAGCAGTCCGTCCA 61.696 66.667 0.00 0.00 0.00 4.02
981 2568 1.378250 CTTCCCTTGGGCAGAGCAG 60.378 63.158 0.00 0.00 0.00 4.24
991 2578 2.124151 CCCCCGCATCTTCCCTTG 60.124 66.667 0.00 0.00 0.00 3.61
1600 3238 2.029518 GTTGTTGCTGGCCTTGGC 59.970 61.111 3.32 6.64 0.00 4.52
1714 3352 1.065854 GTGGAGTGAGATTGGAGGTGG 60.066 57.143 0.00 0.00 0.00 4.61
1715 3353 1.065854 GGTGGAGTGAGATTGGAGGTG 60.066 57.143 0.00 0.00 0.00 4.00
1716 3354 1.280457 GGTGGAGTGAGATTGGAGGT 58.720 55.000 0.00 0.00 0.00 3.85
1717 3355 0.543749 GGGTGGAGTGAGATTGGAGG 59.456 60.000 0.00 0.00 0.00 4.30
1718 3356 1.279496 TGGGTGGAGTGAGATTGGAG 58.721 55.000 0.00 0.00 0.00 3.86
1719 3357 1.351017 GTTGGGTGGAGTGAGATTGGA 59.649 52.381 0.00 0.00 0.00 3.53
1720 3358 1.073763 TGTTGGGTGGAGTGAGATTGG 59.926 52.381 0.00 0.00 0.00 3.16
1722 3360 2.489073 GGTTGTTGGGTGGAGTGAGATT 60.489 50.000 0.00 0.00 0.00 2.40
1723 3361 1.073923 GGTTGTTGGGTGGAGTGAGAT 59.926 52.381 0.00 0.00 0.00 2.75
1724 3362 0.472471 GGTTGTTGGGTGGAGTGAGA 59.528 55.000 0.00 0.00 0.00 3.27
1727 3365 0.464735 TTCGGTTGTTGGGTGGAGTG 60.465 55.000 0.00 0.00 0.00 3.51
1728 3366 0.464916 GTTCGGTTGTTGGGTGGAGT 60.465 55.000 0.00 0.00 0.00 3.85
1730 3368 0.034380 TTGTTCGGTTGTTGGGTGGA 60.034 50.000 0.00 0.00 0.00 4.02
1731 3369 1.000717 GATTGTTCGGTTGTTGGGTGG 60.001 52.381 0.00 0.00 0.00 4.61
1733 3371 0.948678 CGATTGTTCGGTTGTTGGGT 59.051 50.000 0.00 0.00 41.74 4.51
1734 3372 0.386731 GCGATTGTTCGGTTGTTGGG 60.387 55.000 0.00 0.00 45.59 4.12
1742 3380 0.177141 TTAGGGGAGCGATTGTTCGG 59.823 55.000 0.00 0.00 45.59 4.30
1744 3382 2.495084 GGATTAGGGGAGCGATTGTTC 58.505 52.381 0.00 0.00 0.00 3.18
1745 3383 1.143073 GGGATTAGGGGAGCGATTGTT 59.857 52.381 0.00 0.00 0.00 2.83
1746 3384 0.765510 GGGATTAGGGGAGCGATTGT 59.234 55.000 0.00 0.00 0.00 2.71
1750 3388 0.542232 GCTAGGGATTAGGGGAGCGA 60.542 60.000 0.00 0.00 0.00 4.93
1752 3390 1.545706 CGGCTAGGGATTAGGGGAGC 61.546 65.000 0.00 0.00 0.00 4.70
1753 3391 1.545706 GCGGCTAGGGATTAGGGGAG 61.546 65.000 0.00 0.00 0.00 4.30
1754 3392 1.535687 GCGGCTAGGGATTAGGGGA 60.536 63.158 0.00 0.00 0.00 4.81
1755 3393 1.201429 ATGCGGCTAGGGATTAGGGG 61.201 60.000 0.00 0.00 0.00 4.79
1756 3394 0.693049 AATGCGGCTAGGGATTAGGG 59.307 55.000 0.00 0.00 0.00 3.53
1781 3433 0.548031 TTGGACTCCATCATCCCTGC 59.452 55.000 0.00 0.00 33.69 4.85
1957 3615 0.318120 GCTGTTGGTTGGGGATTGTG 59.682 55.000 0.00 0.00 0.00 3.33
1974 3632 1.672881 GGTGCGCAGAATGATTTAGCT 59.327 47.619 12.22 0.00 39.69 3.32
1977 3639 4.717233 AAATGGTGCGCAGAATGATTTA 57.283 36.364 12.22 0.00 39.69 1.40
2035 3709 2.358737 CGTCCTTGTCCACCCTGC 60.359 66.667 0.00 0.00 0.00 4.85
2090 3764 1.821136 GTGGTAAGTAGTAGTGGCGGT 59.179 52.381 0.00 0.00 0.00 5.68
2091 3765 2.097825 AGTGGTAAGTAGTAGTGGCGG 58.902 52.381 0.00 0.00 0.00 6.13
2092 3766 2.734492 GCAGTGGTAAGTAGTAGTGGCG 60.734 54.545 0.00 0.00 0.00 5.69
2093 3767 2.496470 AGCAGTGGTAAGTAGTAGTGGC 59.504 50.000 0.00 0.00 0.00 5.01
2094 3768 3.676324 GCAGCAGTGGTAAGTAGTAGTGG 60.676 52.174 0.00 0.00 0.00 4.00
2095 3769 3.193691 AGCAGCAGTGGTAAGTAGTAGTG 59.806 47.826 0.00 0.00 30.68 2.74
2108 3782 2.093310 CGTATGAAGAACAGCAGCAGTG 59.907 50.000 0.00 0.00 0.00 3.66
2142 3822 2.359478 CGACCGGGGTGAAAAGGG 60.359 66.667 6.32 0.00 0.00 3.95
2176 3856 1.726791 AGAATTTGTACTGTCGCAGCG 59.273 47.619 9.06 9.06 34.37 5.18
2211 3891 9.939802 AAAATATACTGGTCCGAATATTCTACC 57.060 33.333 21.47 21.47 33.78 3.18
2227 3910 5.241506 ACGGCCCAATCATGAAAATATACTG 59.758 40.000 0.00 0.00 0.00 2.74
2314 3997 2.936498 CCAATCCACACATACGGTTCTC 59.064 50.000 0.00 0.00 0.00 2.87
2379 4062 3.638592 ATGGTTTCTTCCCCCGCCG 62.639 63.158 0.00 0.00 0.00 6.46
2454 4137 1.334054 CGTCCCGTGTTTCTAGAACG 58.666 55.000 4.18 6.57 37.07 3.95
2472 4157 1.755179 TACGTAACCTCTTCCTCCCG 58.245 55.000 0.00 0.00 0.00 5.14
2473 4158 4.750021 ATTTACGTAACCTCTTCCTCCC 57.250 45.455 7.70 0.00 0.00 4.30
2474 4159 6.536582 GGTAAATTTACGTAACCTCTTCCTCC 59.463 42.308 19.48 0.00 34.50 4.30
2475 4160 7.063898 GTGGTAAATTTACGTAACCTCTTCCTC 59.936 40.741 19.48 4.64 34.50 3.71
2476 4161 6.875726 GTGGTAAATTTACGTAACCTCTTCCT 59.124 38.462 19.48 0.00 34.50 3.36
2534 4219 1.291877 ACTGTTGCGTTCGATCTGGC 61.292 55.000 0.00 0.00 0.00 4.85
2594 4279 1.746470 CCCCCTGTTGAACGGATTAC 58.254 55.000 5.57 0.00 0.00 1.89
2627 4312 9.138062 CGGAGACAATAGATTAGATCAAATCTG 57.862 37.037 8.91 0.00 44.15 2.90
2634 4319 7.707035 ACAACAACGGAGACAATAGATTAGATC 59.293 37.037 0.00 0.00 0.00 2.75
2649 4334 1.455786 GTCACGATCACAACAACGGAG 59.544 52.381 0.00 0.00 0.00 4.63
2664 4350 1.199097 GGCCCTTTACACAATGTCACG 59.801 52.381 0.00 0.00 0.00 4.35
2685 4371 1.206849 ACCAAAAACACAACCTGGCTG 59.793 47.619 0.00 0.00 0.00 4.85
2703 4389 1.243902 TGGAAAAAGGCACGATGACC 58.756 50.000 0.00 0.00 0.00 4.02
2906 4593 7.057264 GGAAGCCAGAAGGAATCTATAGTTTT 58.943 38.462 0.00 0.00 36.32 2.43
2936 4624 3.914426 TCAAGGAAACCAGAGGATAGC 57.086 47.619 0.00 0.00 0.00 2.97
2990 4681 7.807907 CGGAACTTTGTTTTTCAGTAGCAATAT 59.192 33.333 0.00 0.00 0.00 1.28
2991 4682 7.136119 CGGAACTTTGTTTTTCAGTAGCAATA 58.864 34.615 0.00 0.00 0.00 1.90
2992 4683 5.977129 CGGAACTTTGTTTTTCAGTAGCAAT 59.023 36.000 0.00 0.00 0.00 3.56
2993 4684 5.106078 ACGGAACTTTGTTTTTCAGTAGCAA 60.106 36.000 0.00 0.00 29.74 3.91
2994 4685 4.396790 ACGGAACTTTGTTTTTCAGTAGCA 59.603 37.500 0.00 0.00 29.74 3.49
2995 4686 4.916870 ACGGAACTTTGTTTTTCAGTAGC 58.083 39.130 0.00 0.00 29.74 3.58
2996 4687 6.359480 AGACGGAACTTTGTTTTTCAGTAG 57.641 37.500 0.00 0.00 31.40 2.57
2997 4688 8.441312 AATAGACGGAACTTTGTTTTTCAGTA 57.559 30.769 0.00 0.00 31.40 2.74
2998 4689 6.937436 ATAGACGGAACTTTGTTTTTCAGT 57.063 33.333 0.00 0.00 33.54 3.41
2999 4690 6.856426 GGAATAGACGGAACTTTGTTTTTCAG 59.144 38.462 0.00 0.00 0.00 3.02
3000 4691 6.319152 TGGAATAGACGGAACTTTGTTTTTCA 59.681 34.615 0.00 0.00 0.00 2.69
3001 4692 6.731164 TGGAATAGACGGAACTTTGTTTTTC 58.269 36.000 0.00 0.00 0.00 2.29
3002 4693 6.702716 TGGAATAGACGGAACTTTGTTTTT 57.297 33.333 0.00 0.00 0.00 1.94
3003 4694 6.488683 TGATGGAATAGACGGAACTTTGTTTT 59.511 34.615 0.00 0.00 0.00 2.43
3004 4695 6.001460 TGATGGAATAGACGGAACTTTGTTT 58.999 36.000 0.00 0.00 0.00 2.83
3005 4696 5.411669 GTGATGGAATAGACGGAACTTTGTT 59.588 40.000 0.00 0.00 0.00 2.83
3006 4697 4.935808 GTGATGGAATAGACGGAACTTTGT 59.064 41.667 0.00 0.00 0.00 2.83
3007 4698 5.178797 AGTGATGGAATAGACGGAACTTTG 58.821 41.667 0.00 0.00 0.00 2.77
3008 4699 5.422214 AGTGATGGAATAGACGGAACTTT 57.578 39.130 0.00 0.00 0.00 2.66
3009 4700 6.239345 GGATAGTGATGGAATAGACGGAACTT 60.239 42.308 0.00 0.00 0.00 2.66
3010 4701 5.244178 GGATAGTGATGGAATAGACGGAACT 59.756 44.000 0.00 0.00 0.00 3.01
3011 4702 5.244178 AGGATAGTGATGGAATAGACGGAAC 59.756 44.000 0.00 0.00 0.00 3.62
3012 4703 5.394738 AGGATAGTGATGGAATAGACGGAA 58.605 41.667 0.00 0.00 0.00 4.30
3013 4704 4.999310 AGGATAGTGATGGAATAGACGGA 58.001 43.478 0.00 0.00 0.00 4.69
3014 4705 5.013547 AGAGGATAGTGATGGAATAGACGG 58.986 45.833 0.00 0.00 0.00 4.79
3015 4706 5.105957 CCAGAGGATAGTGATGGAATAGACG 60.106 48.000 0.00 0.00 32.55 4.18
3016 4707 5.777732 ACCAGAGGATAGTGATGGAATAGAC 59.222 44.000 0.00 0.00 34.99 2.59
3017 4708 5.970289 ACCAGAGGATAGTGATGGAATAGA 58.030 41.667 0.00 0.00 34.99 1.98
3018 4709 6.678568 AACCAGAGGATAGTGATGGAATAG 57.321 41.667 0.00 0.00 34.99 1.73
3019 4710 6.043243 GGAAACCAGAGGATAGTGATGGAATA 59.957 42.308 0.00 0.00 34.99 1.75
3020 4711 5.163152 GGAAACCAGAGGATAGTGATGGAAT 60.163 44.000 0.00 0.00 34.99 3.01
3021 4712 4.164221 GGAAACCAGAGGATAGTGATGGAA 59.836 45.833 0.00 0.00 34.99 3.53
3022 4713 3.711704 GGAAACCAGAGGATAGTGATGGA 59.288 47.826 0.00 0.00 34.99 3.41
3023 4714 3.713764 AGGAAACCAGAGGATAGTGATGG 59.286 47.826 0.00 0.00 37.07 3.51
3024 4715 4.202305 GGAGGAAACCAGAGGATAGTGATG 60.202 50.000 0.00 0.00 0.00 3.07
3025 4716 3.970640 GGAGGAAACCAGAGGATAGTGAT 59.029 47.826 0.00 0.00 0.00 3.06
3026 4717 3.245984 TGGAGGAAACCAGAGGATAGTGA 60.246 47.826 0.00 0.00 34.77 3.41
3027 4718 3.107601 TGGAGGAAACCAGAGGATAGTG 58.892 50.000 0.00 0.00 34.77 2.74
3028 4719 3.491766 TGGAGGAAACCAGAGGATAGT 57.508 47.619 0.00 0.00 34.77 2.12
3029 4720 4.844349 TTTGGAGGAAACCAGAGGATAG 57.156 45.455 0.00 0.00 41.19 2.08
3030 4721 5.039645 AGATTTGGAGGAAACCAGAGGATA 58.960 41.667 0.00 0.00 41.19 2.59
3031 4722 3.854994 AGATTTGGAGGAAACCAGAGGAT 59.145 43.478 0.00 0.00 41.19 3.24
3032 4723 3.260205 AGATTTGGAGGAAACCAGAGGA 58.740 45.455 0.00 0.00 41.19 3.71
3033 4724 3.728385 AGATTTGGAGGAAACCAGAGG 57.272 47.619 0.00 0.00 41.19 3.69
3047 4738 7.504924 TTTTCAGTAGTACACCCAAGATTTG 57.495 36.000 2.52 0.00 0.00 2.32
3048 4739 7.558444 TGTTTTTCAGTAGTACACCCAAGATTT 59.442 33.333 2.52 0.00 0.00 2.17
3049 4740 7.057894 TGTTTTTCAGTAGTACACCCAAGATT 58.942 34.615 2.52 0.00 0.00 2.40
3050 4741 6.597562 TGTTTTTCAGTAGTACACCCAAGAT 58.402 36.000 2.52 0.00 0.00 2.40
3051 4742 5.991861 TGTTTTTCAGTAGTACACCCAAGA 58.008 37.500 2.52 0.00 0.00 3.02
3052 4743 6.687081 TTGTTTTTCAGTAGTACACCCAAG 57.313 37.500 2.52 0.00 0.00 3.61
3053 4744 6.095720 CCTTTGTTTTTCAGTAGTACACCCAA 59.904 38.462 2.52 0.00 0.00 4.12
3054 4745 5.591067 CCTTTGTTTTTCAGTAGTACACCCA 59.409 40.000 2.52 0.00 0.00 4.51
3055 4746 5.506815 GCCTTTGTTTTTCAGTAGTACACCC 60.507 44.000 2.52 0.00 0.00 4.61
3056 4747 5.506815 GGCCTTTGTTTTTCAGTAGTACACC 60.507 44.000 2.52 0.00 0.00 4.16
3057 4748 5.506815 GGGCCTTTGTTTTTCAGTAGTACAC 60.507 44.000 0.84 0.00 0.00 2.90
3058 4749 4.581409 GGGCCTTTGTTTTTCAGTAGTACA 59.419 41.667 0.84 0.00 0.00 2.90
3059 4750 4.319984 CGGGCCTTTGTTTTTCAGTAGTAC 60.320 45.833 0.84 0.00 0.00 2.73
3078 4769 4.022676 TCACAGGAAGAAAAATAAACGGGC 60.023 41.667 0.00 0.00 0.00 6.13
3079 4770 5.240844 ACTCACAGGAAGAAAAATAAACGGG 59.759 40.000 0.00 0.00 0.00 5.28
3081 4772 6.954944 TGACTCACAGGAAGAAAAATAAACG 58.045 36.000 0.00 0.00 0.00 3.60
3084 4775 7.867403 GCATTTGACTCACAGGAAGAAAAATAA 59.133 33.333 0.00 0.00 0.00 1.40
3092 4783 2.095364 GCAGCATTTGACTCACAGGAAG 60.095 50.000 0.00 0.00 0.00 3.46
3100 4791 0.964358 AGGCTGGCAGCATTTGACTC 60.964 55.000 37.49 19.35 44.75 3.36
3112 4803 2.827642 GATCAGTGGCAGGCTGGC 60.828 66.667 31.94 31.94 44.03 4.85
3113 4804 1.153208 GAGATCAGTGGCAGGCTGG 60.153 63.158 17.64 0.00 34.89 4.85
3114 4805 1.153208 GGAGATCAGTGGCAGGCTG 60.153 63.158 10.94 10.94 35.43 4.85
3115 4806 1.306825 AGGAGATCAGTGGCAGGCT 60.307 57.895 0.00 0.00 0.00 4.58
3116 4807 1.145819 GAGGAGATCAGTGGCAGGC 59.854 63.158 0.00 0.00 0.00 4.85
3117 4808 0.979709 TGGAGGAGATCAGTGGCAGG 60.980 60.000 0.00 0.00 0.00 4.85
3118 4809 0.464870 CTGGAGGAGATCAGTGGCAG 59.535 60.000 0.00 0.00 0.00 4.85
3124 4815 4.286549 AGGATATTTGCTGGAGGAGATCAG 59.713 45.833 0.00 0.00 0.00 2.90
3127 4818 5.659503 TCTAGGATATTTGCTGGAGGAGAT 58.340 41.667 0.00 0.00 0.00 2.75
3165 4856 6.248569 AGGAGGACAGAAGTAGAAACAAAA 57.751 37.500 0.00 0.00 0.00 2.44
3182 4873 6.214615 TGTTAAAACAGATATGTGGAGGAGGA 59.785 38.462 4.70 0.00 34.30 3.71
3199 4890 6.702723 GGTTCAACCTTTGGGTATGTTAAAAC 59.297 38.462 0.00 0.00 46.67 2.43
3230 4921 3.327757 AGACTGGCCAACAAGTAAGATGA 59.672 43.478 7.01 0.00 0.00 2.92
3300 4991 1.625818 AGCTCCAGAAAGTGAACCGAT 59.374 47.619 0.00 0.00 0.00 4.18
3366 5057 0.486879 TCCAAGCCCATGGTTTCCTT 59.513 50.000 11.73 4.78 41.46 3.36
3381 5079 1.909302 CTGAAGACCTAAGGGCTCCAA 59.091 52.381 0.00 0.00 35.63 3.53
3431 5129 5.523552 TCAGCGAACCAACATATATGACTTG 59.476 40.000 19.63 13.21 0.00 3.16
3487 5185 8.177663 CCACAACATTTTTACTGCATCTACTAG 58.822 37.037 0.00 0.00 0.00 2.57
3505 5203 5.534207 AAACATGTCAATCACCACAACAT 57.466 34.783 0.00 0.00 0.00 2.71
3571 5269 1.352017 TCAAGGGAAGCATGCTCAGAA 59.648 47.619 22.93 0.15 0.00 3.02
3572 5270 0.986527 TCAAGGGAAGCATGCTCAGA 59.013 50.000 22.93 9.85 0.00 3.27
3577 5275 1.648467 GGTCGTCAAGGGAAGCATGC 61.648 60.000 10.51 10.51 0.00 4.06
3662 5360 8.805175 TCTCATTTGAAGAAGGCAAATTATGAA 58.195 29.630 0.00 0.00 42.33 2.57
3675 5373 7.385752 GCAATGTGGAAAATCTCATTTGAAGAA 59.614 33.333 0.00 0.00 31.77 2.52
3783 5481 9.784531 CAGCCTCTATTCTTGATAGGATTAAAA 57.215 33.333 0.00 0.00 38.62 1.52
3826 5524 2.040813 AGAGGAGAAAATGAGGCAGCAA 59.959 45.455 0.00 0.00 0.00 3.91
3830 5528 3.871463 GCTTGAGAGGAGAAAATGAGGCA 60.871 47.826 0.00 0.00 0.00 4.75
3831 5529 2.682352 GCTTGAGAGGAGAAAATGAGGC 59.318 50.000 0.00 0.00 0.00 4.70
3832 5530 3.947868 TGCTTGAGAGGAGAAAATGAGG 58.052 45.455 0.00 0.00 0.00 3.86
3834 5532 4.978099 ACTTGCTTGAGAGGAGAAAATGA 58.022 39.130 0.00 0.00 0.00 2.57
3835 5533 5.702349 AACTTGCTTGAGAGGAGAAAATG 57.298 39.130 0.00 0.00 0.00 2.32
3836 5534 9.692325 AATATAACTTGCTTGAGAGGAGAAAAT 57.308 29.630 0.00 0.00 0.00 1.82
3837 5535 9.520515 AAATATAACTTGCTTGAGAGGAGAAAA 57.479 29.630 0.00 0.00 0.00 2.29
3838 5536 8.950210 CAAATATAACTTGCTTGAGAGGAGAAA 58.050 33.333 0.00 0.00 0.00 2.52
3839 5537 7.554118 CCAAATATAACTTGCTTGAGAGGAGAA 59.446 37.037 0.00 0.00 0.00 2.87
3840 5538 7.050377 CCAAATATAACTTGCTTGAGAGGAGA 58.950 38.462 0.00 0.00 0.00 3.71
3841 5539 6.261826 CCCAAATATAACTTGCTTGAGAGGAG 59.738 42.308 0.00 0.00 0.00 3.69
3842 5540 6.122277 CCCAAATATAACTTGCTTGAGAGGA 58.878 40.000 0.00 0.00 0.00 3.71
3843 5541 5.888161 ACCCAAATATAACTTGCTTGAGAGG 59.112 40.000 0.00 0.00 0.00 3.69
3844 5542 7.987458 TCTACCCAAATATAACTTGCTTGAGAG 59.013 37.037 0.00 0.00 0.00 3.20
3845 5543 7.857456 TCTACCCAAATATAACTTGCTTGAGA 58.143 34.615 0.00 0.00 0.00 3.27
3846 5544 8.398665 GTTCTACCCAAATATAACTTGCTTGAG 58.601 37.037 0.00 0.00 0.00 3.02
3847 5545 8.107095 AGTTCTACCCAAATATAACTTGCTTGA 58.893 33.333 0.00 0.00 0.00 3.02
3848 5546 8.281212 AGTTCTACCCAAATATAACTTGCTTG 57.719 34.615 0.00 0.00 0.00 4.01
3849 5547 8.879427 AAGTTCTACCCAAATATAACTTGCTT 57.121 30.769 0.00 0.00 36.21 3.91
3850 5548 8.879427 AAAGTTCTACCCAAATATAACTTGCT 57.121 30.769 0.00 0.00 37.27 3.91
3851 5549 9.569167 GAAAAGTTCTACCCAAATATAACTTGC 57.431 33.333 0.00 0.00 37.27 4.01
3860 5558 8.934023 TTGACTATGAAAAGTTCTACCCAAAT 57.066 30.769 0.00 0.00 0.00 2.32
3861 5559 8.754991 TTTGACTATGAAAAGTTCTACCCAAA 57.245 30.769 0.00 0.00 0.00 3.28
3862 5560 8.934023 ATTTGACTATGAAAAGTTCTACCCAA 57.066 30.769 0.00 0.00 0.00 4.12
3863 5561 8.934023 AATTTGACTATGAAAAGTTCTACCCA 57.066 30.769 0.00 0.00 0.00 4.51
3873 5571 9.621629 ACGGTGGATATAATTTGACTATGAAAA 57.378 29.630 0.00 0.00 0.00 2.29
3874 5572 9.268268 GACGGTGGATATAATTTGACTATGAAA 57.732 33.333 0.00 0.00 0.00 2.69
3875 5573 7.876068 GGACGGTGGATATAATTTGACTATGAA 59.124 37.037 0.00 0.00 0.00 2.57
3876 5574 7.383687 GGACGGTGGATATAATTTGACTATGA 58.616 38.462 0.00 0.00 0.00 2.15
3916 5614 1.738099 GCCGTCGCTGTCTCACAAT 60.738 57.895 0.00 0.00 0.00 2.71
3977 5676 6.959639 ACCAGAACAACAATTCTACAACAT 57.040 33.333 0.00 0.00 36.78 2.71
4150 5849 9.701098 AAAGACTCGTACACACATAAGAAATAA 57.299 29.630 0.00 0.00 0.00 1.40
4151 5850 9.135843 CAAAGACTCGTACACACATAAGAAATA 57.864 33.333 0.00 0.00 0.00 1.40
4165 5864 2.094649 ACAGCCTAGCAAAGACTCGTAC 60.095 50.000 0.00 0.00 0.00 3.67
4167 5866 0.969894 ACAGCCTAGCAAAGACTCGT 59.030 50.000 0.00 0.00 0.00 4.18
4170 5869 0.689623 AGCACAGCCTAGCAAAGACT 59.310 50.000 0.00 0.00 0.00 3.24
4171 5870 2.386661 TAGCACAGCCTAGCAAAGAC 57.613 50.000 0.00 0.00 0.00 3.01
4176 5875 1.048601 GGGTATAGCACAGCCTAGCA 58.951 55.000 4.02 0.00 0.00 3.49
4177 5876 1.343069 AGGGTATAGCACAGCCTAGC 58.657 55.000 4.02 0.00 42.04 3.42
4178 5877 5.221342 GCATATAGGGTATAGCACAGCCTAG 60.221 48.000 13.41 4.52 46.36 3.02
4179 5878 4.649674 GCATATAGGGTATAGCACAGCCTA 59.350 45.833 11.19 11.19 47.00 3.93
4180 5879 3.452627 GCATATAGGGTATAGCACAGCCT 59.547 47.826 4.02 7.90 45.62 4.58
4181 5880 3.197766 TGCATATAGGGTATAGCACAGCC 59.802 47.826 4.02 0.00 0.00 4.85
4182 5881 4.471904 TGCATATAGGGTATAGCACAGC 57.528 45.455 4.02 0.00 0.00 4.40
4183 5882 5.295292 GCATTGCATATAGGGTATAGCACAG 59.705 44.000 3.15 0.00 30.30 3.66
4184 5883 5.045651 AGCATTGCATATAGGGTATAGCACA 60.046 40.000 11.91 0.00 30.30 4.57
4185 5884 5.431765 AGCATTGCATATAGGGTATAGCAC 58.568 41.667 11.91 0.00 30.30 4.40
4186 5885 5.698741 AGCATTGCATATAGGGTATAGCA 57.301 39.130 11.91 0.00 0.00 3.49
4187 5886 7.770897 ACTAAAGCATTGCATATAGGGTATAGC 59.229 37.037 11.91 0.00 0.00 2.97
4188 5887 9.672673 AACTAAAGCATTGCATATAGGGTATAG 57.327 33.333 11.91 0.00 0.00 1.31
4189 5888 9.667107 GAACTAAAGCATTGCATATAGGGTATA 57.333 33.333 11.91 0.00 0.00 1.47
4190 5889 7.611855 GGAACTAAAGCATTGCATATAGGGTAT 59.388 37.037 11.91 0.00 0.00 2.73
4191 5890 6.940298 GGAACTAAAGCATTGCATATAGGGTA 59.060 38.462 11.91 0.00 0.00 3.69
4192 5891 5.770162 GGAACTAAAGCATTGCATATAGGGT 59.230 40.000 11.91 3.21 0.00 4.34
4193 5892 5.769662 TGGAACTAAAGCATTGCATATAGGG 59.230 40.000 11.91 0.00 0.00 3.53
4194 5893 6.882610 TGGAACTAAAGCATTGCATATAGG 57.117 37.500 11.91 0.00 0.00 2.57
4195 5894 9.754382 AAAATGGAACTAAAGCATTGCATATAG 57.246 29.630 11.91 11.66 36.03 1.31
4199 5898 9.452287 AATAAAAATGGAACTAAAGCATTGCAT 57.548 25.926 11.91 0.00 38.37 3.96
4200 5899 8.845413 AATAAAAATGGAACTAAAGCATTGCA 57.155 26.923 11.91 0.00 0.00 4.08
4201 5900 9.759259 GAAATAAAAATGGAACTAAAGCATTGC 57.241 29.630 0.00 0.00 0.00 3.56
4210 5909 9.781834 CGCACATAAGAAATAAAAATGGAACTA 57.218 29.630 0.00 0.00 0.00 2.24
4211 5910 8.303876 ACGCACATAAGAAATAAAAATGGAACT 58.696 29.630 0.00 0.00 0.00 3.01
4212 5911 8.460831 ACGCACATAAGAAATAAAAATGGAAC 57.539 30.769 0.00 0.00 0.00 3.62
4213 5912 9.562583 GTACGCACATAAGAAATAAAAATGGAA 57.437 29.630 0.00 0.00 0.00 3.53
4214 5913 7.906010 CGTACGCACATAAGAAATAAAAATGGA 59.094 33.333 0.52 0.00 0.00 3.41
4215 5914 7.906010 TCGTACGCACATAAGAAATAAAAATGG 59.094 33.333 11.24 0.00 0.00 3.16
4216 5915 8.814733 TCGTACGCACATAAGAAATAAAAATG 57.185 30.769 11.24 0.00 0.00 2.32
4217 5916 8.662141 ACTCGTACGCACATAAGAAATAAAAAT 58.338 29.630 11.24 0.00 0.00 1.82
4218 5917 8.020861 ACTCGTACGCACATAAGAAATAAAAA 57.979 30.769 11.24 0.00 0.00 1.94
4219 5918 7.543172 AGACTCGTACGCACATAAGAAATAAAA 59.457 33.333 11.24 0.00 0.00 1.52
4220 5919 7.031372 AGACTCGTACGCACATAAGAAATAAA 58.969 34.615 11.24 0.00 0.00 1.40
4221 5920 6.558009 AGACTCGTACGCACATAAGAAATAA 58.442 36.000 11.24 0.00 0.00 1.40
4222 5921 6.127810 AGACTCGTACGCACATAAGAAATA 57.872 37.500 11.24 0.00 0.00 1.40
4223 5922 4.995124 AGACTCGTACGCACATAAGAAAT 58.005 39.130 11.24 0.00 0.00 2.17
4224 5923 4.430137 AGACTCGTACGCACATAAGAAA 57.570 40.909 11.24 0.00 0.00 2.52
4225 5924 4.430137 AAGACTCGTACGCACATAAGAA 57.570 40.909 11.24 0.00 0.00 2.52
4226 5925 4.163552 CAAAGACTCGTACGCACATAAGA 58.836 43.478 11.24 0.00 0.00 2.10
4227 5926 3.241678 GCAAAGACTCGTACGCACATAAG 60.242 47.826 11.24 3.98 0.00 1.73
4228 5927 2.664568 GCAAAGACTCGTACGCACATAA 59.335 45.455 11.24 0.00 0.00 1.90
4229 5928 2.094906 AGCAAAGACTCGTACGCACATA 60.095 45.455 11.24 0.00 0.00 2.29
4230 5929 1.068474 GCAAAGACTCGTACGCACAT 58.932 50.000 11.24 0.00 0.00 3.21
4231 5930 0.031585 AGCAAAGACTCGTACGCACA 59.968 50.000 11.24 0.00 0.00 4.57
4232 5931 1.912110 CTAGCAAAGACTCGTACGCAC 59.088 52.381 11.24 4.26 0.00 5.34
4233 5932 1.135489 CCTAGCAAAGACTCGTACGCA 60.135 52.381 11.24 0.00 0.00 5.24
4234 5933 1.546834 CCTAGCAAAGACTCGTACGC 58.453 55.000 11.24 0.00 0.00 4.42
4235 5934 1.132643 AGCCTAGCAAAGACTCGTACG 59.867 52.381 9.53 9.53 0.00 3.67
4236 5935 2.094649 ACAGCCTAGCAAAGACTCGTAC 60.095 50.000 0.00 0.00 0.00 3.67
4237 5936 2.094700 CACAGCCTAGCAAAGACTCGTA 60.095 50.000 0.00 0.00 0.00 3.43
4238 5937 0.969894 ACAGCCTAGCAAAGACTCGT 59.030 50.000 0.00 0.00 0.00 4.18
4239 5938 1.337260 ACACAGCCTAGCAAAGACTCG 60.337 52.381 0.00 0.00 0.00 4.18
4240 5939 2.464157 ACACAGCCTAGCAAAGACTC 57.536 50.000 0.00 0.00 0.00 3.36
4241 5940 2.880890 CAAACACAGCCTAGCAAAGACT 59.119 45.455 0.00 0.00 0.00 3.24
4242 5941 2.618709 ACAAACACAGCCTAGCAAAGAC 59.381 45.455 0.00 0.00 0.00 3.01
4243 5942 2.930950 ACAAACACAGCCTAGCAAAGA 58.069 42.857 0.00 0.00 0.00 2.52
4244 5943 3.715628 AACAAACACAGCCTAGCAAAG 57.284 42.857 0.00 0.00 0.00 2.77
4245 5944 3.430098 CCAAACAAACACAGCCTAGCAAA 60.430 43.478 0.00 0.00 0.00 3.68
4246 5945 2.100584 CCAAACAAACACAGCCTAGCAA 59.899 45.455 0.00 0.00 0.00 3.91
4409 6108 3.052642 AGGCCCCACAAGATTATGATTGT 60.053 43.478 0.00 0.00 40.18 2.71
4450 6149 4.025647 CAGTCTGAGAACCGAAAGTCAAAC 60.026 45.833 0.00 0.00 0.00 2.93
4461 6160 2.072298 GTGCACATCAGTCTGAGAACC 58.928 52.381 13.17 0.00 0.00 3.62
4527 6226 3.496331 ACCCAATCAACAGTCGGAAAAT 58.504 40.909 0.00 0.00 0.00 1.82
4528 6227 2.882137 GACCCAATCAACAGTCGGAAAA 59.118 45.455 0.00 0.00 0.00 2.29
4620 6319 9.528489 ACACACTTTTATCCAACTACCATAATT 57.472 29.630 0.00 0.00 0.00 1.40
4731 6431 8.254508 GCCTATCCACAAACCAAACAATTATAA 58.745 33.333 0.00 0.00 0.00 0.98
4748 6448 2.629617 CCCATCAATTTGGCCTATCCAC 59.370 50.000 3.32 0.00 46.55 4.02
4870 6570 0.877213 CCAACTGCCAAAGCTGCAAC 60.877 55.000 1.02 0.00 41.37 4.17
4996 6696 3.940209 TTGCTGCTCATTTTTCGGATT 57.060 38.095 0.00 0.00 0.00 3.01
5085 6785 9.447157 GGATAAATTTCCAAATGAACAATCCAA 57.553 29.630 0.00 0.00 35.72 3.53
5369 7069 4.963276 TCTGCAGGAAATTTATTGGACG 57.037 40.909 15.13 0.00 0.00 4.79
5461 7163 8.404765 GGTCTACAGAAACTAGGTACAGATAAC 58.595 40.741 0.00 0.00 0.00 1.89
5621 7335 3.028850 TGGGGGAGTCGTCTATTAACTG 58.971 50.000 0.00 0.00 0.00 3.16
5685 7399 3.252215 TCACAACCCATTTTCTAACTGCG 59.748 43.478 0.00 0.00 0.00 5.18
5715 7430 6.035975 GCAACCAGGCAAAATATGATTGTTAC 59.964 38.462 0.00 0.00 0.00 2.50
5716 7431 6.070881 AGCAACCAGGCAAAATATGATTGTTA 60.071 34.615 0.00 0.00 35.83 2.41
5760 7488 7.759489 AACAAAACATAAGATAACAGGAGCA 57.241 32.000 0.00 0.00 0.00 4.26
5801 7529 5.945191 TGCTGATGGAAAACAATGACTATCA 59.055 36.000 0.00 0.00 0.00 2.15
5927 7657 9.541143 ACTAAAACCACAACAATTATTTTGGAG 57.459 29.630 8.62 0.00 0.00 3.86
5942 7672 7.099764 TGCTTCAATTTTGAACTAAAACCACA 58.900 30.769 1.66 0.00 41.88 4.17
6013 7743 7.349859 TCATCCTCTTAATTTAGGTGGGTACAT 59.650 37.037 6.76 0.00 34.30 2.29
6053 7783 5.470368 CATCCGACTTATGTATGGTACCAG 58.530 45.833 21.41 7.13 0.00 4.00
6066 7796 1.434188 ATCATGGCCCATCCGACTTA 58.566 50.000 0.00 0.00 37.80 2.24
6120 7850 0.178068 GGATGAGCCGGCTTTACAGA 59.822 55.000 33.34 10.96 0.00 3.41
6166 7910 0.179018 GGACCACAGCTTGTCCTTGT 60.179 55.000 16.18 0.00 46.13 3.16
6187 7931 4.930963 TGTGCGTTCAAATGAAAATGAGT 58.069 34.783 0.00 0.00 35.58 3.41
6247 7991 7.944000 TGGGCACAACTAATGATCACATTATAT 59.056 33.333 0.00 0.00 44.55 0.86
6272 8016 9.897744 AATTGTAAGTTGATAACAGACACATTG 57.102 29.630 0.00 0.00 30.89 2.82
6295 8039 6.821665 TGTAAAATTAGCCTAGAGTGCGAATT 59.178 34.615 5.24 5.24 43.04 2.17
6328 8072 9.158233 GTTCAGTGTTAGCTGTAACCATTATAA 57.842 33.333 0.00 0.00 38.24 0.98
6369 8129 3.630148 CGCCGCAATAGTCTGCCG 61.630 66.667 0.00 0.00 39.26 5.69
6475 8235 0.790814 GAAGTACTTGCGCAGTGGAC 59.209 55.000 14.14 14.80 35.97 4.02
6548 8308 5.435686 TGCAGACAACCATAATAACTCCT 57.564 39.130 0.00 0.00 0.00 3.69
6731 8491 7.265599 TCTTTTGTACCAATCCAGGATAAGA 57.734 36.000 1.02 2.71 0.00 2.10
6775 8535 6.437793 TCAGGTAAAGAGAGTAAAGGAGAAGG 59.562 42.308 0.00 0.00 0.00 3.46
6815 8575 4.201990 CCATGTCTGCAAAAGAGATTAGGC 60.202 45.833 0.00 0.00 36.79 3.93
7072 8832 5.714333 ACATTGAACAAACATATACTGCCCA 59.286 36.000 0.00 0.00 0.00 5.36
7167 8927 7.781548 ACATACTAAATAGTGTAAAAGCGGG 57.218 36.000 3.36 0.00 37.10 6.13
7217 8977 5.648178 TTGAATGAAGTGCAATGCATACT 57.352 34.783 12.38 1.09 41.91 2.12
7301 9061 4.113354 GTCGGACATGGATACTGAGAAAC 58.887 47.826 2.62 0.00 37.61 2.78
7340 9100 0.811915 ATACACGCTTGAGCTCTCGT 59.188 50.000 16.19 17.61 39.32 4.18
7370 9130 2.569059 CCATTCATAGGTGGCTCACAG 58.431 52.381 7.49 0.00 35.86 3.66
7685 9445 9.933240 AGTAGTTCTAATTGTAGTAGGGTACAT 57.067 33.333 0.00 0.00 32.92 2.29
7749 9516 1.493022 TGCGGTTAGGGCATAAGGAAT 59.507 47.619 0.00 0.00 35.04 3.01
7758 9540 0.733150 GTTCTTCATGCGGTTAGGGC 59.267 55.000 0.00 0.00 0.00 5.19
7820 9602 9.476202 GACTAGTTTTTCATAGTTTTGGCAAAT 57.524 29.630 14.29 2.12 32.43 2.32
7908 9690 0.911769 CAGATGCCTTACTGGGTCCA 59.088 55.000 0.00 0.00 36.00 4.02
8007 9789 0.032952 AAGAGCCTTGTTCGCGTGTA 59.967 50.000 5.77 0.00 0.00 2.90
8257 10041 0.038892 ACACTACATCGACGCCGTTT 60.039 50.000 0.00 0.00 37.05 3.60
8295 10079 5.043248 GCCAATTGGTATGTCATAACTTGC 58.957 41.667 25.19 1.56 37.57 4.01
8375 10159 5.829924 ACATGTTTCTTTTCCACATCTCACT 59.170 36.000 0.00 0.00 0.00 3.41
8694 10494 5.327091 CAGTTACCTTCTTTGCAATGATCG 58.673 41.667 15.04 10.64 0.00 3.69
8756 10558 0.685097 TTAGTTCCTGCGCCAGAACT 59.315 50.000 31.98 31.98 36.56 3.01
8834 10636 4.277423 CGGTTTACCTGGTTTCAGAAATGT 59.723 41.667 3.84 0.00 43.49 2.71
8919 10721 1.434188 TCCCTTGCTCTCCAAAGTCA 58.566 50.000 0.00 0.00 31.94 3.41
8988 10790 5.445142 CGAGTATCTTAAGCAAAGCAGTGTG 60.445 44.000 0.00 0.00 34.97 3.82
8996 10798 6.931838 TCCTTTCTCGAGTATCTTAAGCAAA 58.068 36.000 13.13 0.54 0.00 3.68
9002 10804 5.067936 CCAGCTTCCTTTCTCGAGTATCTTA 59.932 44.000 13.13 0.00 0.00 2.10
9003 10805 4.142049 CCAGCTTCCTTTCTCGAGTATCTT 60.142 45.833 13.13 0.00 0.00 2.40
9012 10814 1.561542 TGATCCCCAGCTTCCTTTCTC 59.438 52.381 0.00 0.00 0.00 2.87
9153 10955 6.373774 CCATAAACCATATTCAGGAGATCAGC 59.626 42.308 0.00 0.00 0.00 4.26
9230 11032 3.003480 CAGTTACTTAGCCTTGTGCCTC 58.997 50.000 0.00 0.00 42.71 4.70
9304 11106 8.662141 GTGTTTCCGTCTGTGTATAATTACAAT 58.338 33.333 0.00 0.00 39.96 2.71
9390 11194 0.178068 CCGGACCCAATCACTACCAG 59.822 60.000 0.00 0.00 0.00 4.00
9435 11239 3.428045 GCACAAGAAACAACACAAGCTCT 60.428 43.478 0.00 0.00 0.00 4.09
9451 11255 3.884895 TGTTATCCTATGGTGGCACAAG 58.115 45.455 20.82 12.83 44.16 3.16
9461 11265 9.976511 ATGAAAAAGAATGCATGTTATCCTATG 57.023 29.630 0.00 0.00 0.00 2.23
9492 11296 2.154854 ACGGTCTCAACATCACACAG 57.845 50.000 0.00 0.00 0.00 3.66
9510 11314 3.507786 AGTCCAAACAAAAACGAGCAAC 58.492 40.909 0.00 0.00 0.00 4.17
9533 11337 5.704978 ACATCAACAGCAACATATACACACA 59.295 36.000 0.00 0.00 0.00 3.72
9534 11338 6.023435 CACATCAACAGCAACATATACACAC 58.977 40.000 0.00 0.00 0.00 3.82
9535 11339 5.704978 ACACATCAACAGCAACATATACACA 59.295 36.000 0.00 0.00 0.00 3.72
9536 11340 6.023435 CACACATCAACAGCAACATATACAC 58.977 40.000 0.00 0.00 0.00 2.90
9537 11341 5.123661 CCACACATCAACAGCAACATATACA 59.876 40.000 0.00 0.00 0.00 2.29
9538 11342 5.353956 TCCACACATCAACAGCAACATATAC 59.646 40.000 0.00 0.00 0.00 1.47
9558 11364 8.954350 CCCTTCTCAATTATGATCATATTCCAC 58.046 37.037 16.06 0.00 34.37 4.02
9574 11380 4.507512 GGAAGAACTTGACCCCTTCTCAAT 60.508 45.833 0.00 0.00 36.28 2.57
9643 11450 1.640428 TGAATTCTGACGGCGATCAC 58.360 50.000 16.62 2.37 0.00 3.06
9644 11451 2.473816 GATGAATTCTGACGGCGATCA 58.526 47.619 16.62 12.87 0.00 2.92
9645 11452 1.453524 CGATGAATTCTGACGGCGATC 59.546 52.381 16.62 8.31 0.00 3.69
9646 11453 1.067060 TCGATGAATTCTGACGGCGAT 59.933 47.619 16.62 0.00 0.00 4.58
9742 11576 7.179338 AGAGATCTTTAGAGCCTGTTTAGAACA 59.821 37.037 0.00 0.00 39.52 3.18
9743 11577 7.552459 AGAGATCTTTAGAGCCTGTTTAGAAC 58.448 38.462 0.00 0.00 0.00 3.01
9744 11578 7.726033 AGAGATCTTTAGAGCCTGTTTAGAA 57.274 36.000 0.00 0.00 0.00 2.10
9746 11580 8.908903 TCTTAGAGATCTTTAGAGCCTGTTTAG 58.091 37.037 0.00 0.00 0.00 1.85
9747 11581 8.824756 TCTTAGAGATCTTTAGAGCCTGTTTA 57.175 34.615 0.00 0.00 0.00 2.01
9748 11582 7.726033 TCTTAGAGATCTTTAGAGCCTGTTT 57.274 36.000 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.