Multiple sequence alignment - TraesCS1A01G344900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G344900 chr1A 100.000 4605 0 0 1 4605 532594981 532599585 0.000000e+00 8504
1 TraesCS1A01G344900 chr1A 89.069 1354 117 14 693 2024 532645152 532646496 0.000000e+00 1652
2 TraesCS1A01G344900 chr1A 93.814 776 23 11 2225 2998 532668964 532669716 0.000000e+00 1144
3 TraesCS1A01G344900 chr1A 96.479 568 20 0 1085 1652 432593140 432592573 0.000000e+00 939
4 TraesCS1A01G344900 chr1A 93.780 627 33 3 3542 4163 532670688 532671313 0.000000e+00 937
5 TraesCS1A01G344900 chr1A 93.407 546 35 1 2994 3539 532670100 532670644 0.000000e+00 808
6 TraesCS1A01G344900 chr1A 84.600 500 70 5 33 527 532644219 532644716 1.490000e-134 490
7 TraesCS1A01G344900 chr1A 88.489 278 23 6 1849 2124 432592548 432592278 1.240000e-85 327
8 TraesCS1A01G344900 chr1A 97.727 176 4 0 4242 4417 532597703 532597878 2.080000e-78 303
9 TraesCS1A01G344900 chr1A 97.727 176 4 0 2723 2898 532599222 532599397 2.080000e-78 303
10 TraesCS1A01G344900 chr1A 96.591 176 6 0 4242 4417 532669447 532669622 4.510000e-75 292
11 TraesCS1A01G344900 chr1A 85.876 177 23 2 4429 4605 523105848 523105674 2.190000e-43 187
12 TraesCS1A01G344900 chr1A 96.154 78 3 0 4166 4243 580574034 580573957 1.340000e-25 128
13 TraesCS1A01G344900 chr1D 91.337 2886 195 20 680 3542 435044360 435047213 0.000000e+00 3893
14 TraesCS1A01G344900 chr1D 92.272 647 43 2 45 685 434427272 434426627 0.000000e+00 911
15 TraesCS1A01G344900 chr1D 94.498 309 17 0 3542 3850 435047254 435047562 1.160000e-130 477
16 TraesCS1A01G344900 chr1D 96.154 286 10 1 3864 4149 435047788 435048072 2.510000e-127 466
17 TraesCS1A01G344900 chr1D 92.222 180 10 1 4242 4417 435046399 435046578 7.650000e-63 252
18 TraesCS1A01G344900 chr1D 95.122 82 4 0 4164 4245 137413989 137413908 3.740000e-26 130
19 TraesCS1A01G344900 chr1D 95.000 80 4 0 4166 4245 62799466 62799387 4.840000e-25 126
20 TraesCS1A01G344900 chr1B 91.377 2331 141 27 631 2938 588421413 588423706 0.000000e+00 3136
21 TraesCS1A01G344900 chr1B 91.234 616 39 7 2931 3542 588424955 588425559 0.000000e+00 824
22 TraesCS1A01G344900 chr1B 88.816 608 56 6 1 607 588420692 588421288 0.000000e+00 736
23 TraesCS1A01G344900 chr1B 93.750 176 11 0 4242 4417 588423491 588423666 9.820000e-67 265
24 TraesCS1A01G344900 chr1B 80.049 411 35 12 3543 3916 588425601 588426001 1.270000e-65 261
25 TraesCS1A01G344900 chr5D 92.994 1042 47 14 1085 2124 366750628 366751645 0.000000e+00 1496
26 TraesCS1A01G344900 chr5D 93.736 910 47 6 1217 2124 365177356 365178257 0.000000e+00 1356
27 TraesCS1A01G344900 chr5D 88.496 113 11 1 3349 3459 26527337 26527225 8.040000e-28 135
28 TraesCS1A01G344900 chr5D 96.203 79 3 0 4167 4245 49744701 49744623 3.740000e-26 130
29 TraesCS1A01G344900 chr6B 82.275 1213 167 26 2068 3252 176282831 176281639 0.000000e+00 1005
30 TraesCS1A01G344900 chr6A 82.378 1152 154 27 2131 3252 111565633 111564501 0.000000e+00 957
31 TraesCS1A01G344900 chr6A 77.673 1057 153 44 1007 2006 111566727 111565697 6.690000e-158 568
32 TraesCS1A01G344900 chr6A 81.868 182 17 6 3296 3461 111563985 111563804 6.210000e-29 139
33 TraesCS1A01G344900 chr6D 78.119 1106 153 47 964 2006 91849224 91848145 1.820000e-173 619
34 TraesCS1A01G344900 chr6D 83.333 342 50 3 2911 3252 91847225 91846891 4.470000e-80 309
35 TraesCS1A01G344900 chr6D 83.019 265 27 7 3296 3542 91846369 91846105 1.670000e-54 224
36 TraesCS1A01G344900 chr6D 88.827 179 17 2 3345 3521 1937824 1938001 2.790000e-52 217
37 TraesCS1A01G344900 chr3D 83.436 326 36 11 1854 2170 565791577 565791261 2.100000e-73 287
38 TraesCS1A01G344900 chr3D 79.227 207 32 8 3964 4166 338357758 338357559 2.890000e-27 134
39 TraesCS1A01G344900 chr3D 96.250 80 3 0 4166 4245 441645597 441645676 1.040000e-26 132
40 TraesCS1A01G344900 chr4A 88.021 192 22 1 4414 4605 590938153 590938343 4.640000e-55 226
41 TraesCS1A01G344900 chr7D 86.082 194 24 2 4414 4605 25721040 25720848 6.040000e-49 206
42 TraesCS1A01G344900 chr2A 87.571 177 21 1 4429 4605 459161837 459161662 2.170000e-48 204
43 TraesCS1A01G344900 chr2A 95.122 82 4 0 4164 4245 80917843 80917762 3.740000e-26 130
44 TraesCS1A01G344900 chr4B 86.441 177 23 1 4429 4605 66601712 66601887 4.700000e-45 193
45 TraesCS1A01G344900 chrUn 85.876 177 24 1 4429 4605 398282595 398282770 2.190000e-43 187
46 TraesCS1A01G344900 chr5A 85.876 177 24 1 4429 4605 473979577 473979402 2.190000e-43 187
47 TraesCS1A01G344900 chr5A 85.876 177 24 1 4429 4605 474152541 474152716 2.190000e-43 187
48 TraesCS1A01G344900 chr5A 85.876 177 24 1 4429 4605 474248398 474248223 2.190000e-43 187
49 TraesCS1A01G344900 chr5A 92.308 91 7 0 3349 3439 18393327 18393417 3.740000e-26 130
50 TraesCS1A01G344900 chr7A 96.250 80 3 0 4166 4245 420376006 420376085 1.040000e-26 132
51 TraesCS1A01G344900 chr4D 96.250 80 3 0 4166 4245 481337796 481337717 1.040000e-26 132
52 TraesCS1A01G344900 chr3A 92.941 85 6 0 4164 4248 370242670 370242586 1.740000e-24 124


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G344900 chr1A 532594981 532599585 4604 False 3036.666667 8504 98.484667 1 4605 3 chr1A.!!$F1 4604
1 TraesCS1A01G344900 chr1A 532644219 532646496 2277 False 1071.000000 1652 86.834500 33 2024 2 chr1A.!!$F2 1991
2 TraesCS1A01G344900 chr1A 532668964 532671313 2349 False 795.250000 1144 94.398000 2225 4417 4 chr1A.!!$F3 2192
3 TraesCS1A01G344900 chr1A 432592278 432593140 862 True 633.000000 939 92.484000 1085 2124 2 chr1A.!!$R3 1039
4 TraesCS1A01G344900 chr1D 435044360 435048072 3712 False 1272.000000 3893 93.552750 680 4417 4 chr1D.!!$F1 3737
5 TraesCS1A01G344900 chr1D 434426627 434427272 645 True 911.000000 911 92.272000 45 685 1 chr1D.!!$R3 640
6 TraesCS1A01G344900 chr1B 588420692 588426001 5309 False 1044.400000 3136 89.045200 1 4417 5 chr1B.!!$F1 4416
7 TraesCS1A01G344900 chr5D 366750628 366751645 1017 False 1496.000000 1496 92.994000 1085 2124 1 chr5D.!!$F2 1039
8 TraesCS1A01G344900 chr5D 365177356 365178257 901 False 1356.000000 1356 93.736000 1217 2124 1 chr5D.!!$F1 907
9 TraesCS1A01G344900 chr6B 176281639 176282831 1192 True 1005.000000 1005 82.275000 2068 3252 1 chr6B.!!$R1 1184
10 TraesCS1A01G344900 chr6A 111563804 111566727 2923 True 554.666667 957 80.639667 1007 3461 3 chr6A.!!$R1 2454
11 TraesCS1A01G344900 chr6D 91846105 91849224 3119 True 384.000000 619 81.490333 964 3542 3 chr6D.!!$R1 2578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.390492 CTAGATGGCGATGTGGAGCA 59.610 55.0 0.00 0.0 34.54 4.26 F
945 1280 0.394938 TCAGTCAACCGCTGGCTAAA 59.605 50.0 0.00 0.0 38.17 1.85 F
1151 1507 0.036388 AACAAGATCATCCACGCCGT 60.036 50.0 0.00 0.0 0.00 5.68 F
1205 1570 0.242825 TTCTCCGACGACGCTGAATT 59.757 50.0 0.64 0.0 38.29 2.17 F
3056 5153 0.035739 TTAGACGGCCACTTGGGAAC 59.964 55.0 2.24 0.0 40.01 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1069 1416 0.649992 AGGGAATGGAGGGAGGATGA 59.350 55.000 0.00 0.00 0.00 2.92 R
2092 2511 0.698818 GGGGTTCTGGATTGTCAGGT 59.301 55.000 0.00 0.00 35.58 4.00 R
2327 2748 1.766496 AGAGAAACAAGGAACCACCGA 59.234 47.619 0.00 0.00 44.74 4.69 R
3155 5252 1.072505 GCTCCCTTGGACAAACCGA 59.927 57.895 0.00 0.00 42.61 4.69 R
4170 7072 0.030369 GCATTGGCTAGAGCATGCAC 59.970 55.000 21.98 14.59 44.74 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 0.390492 CTAGATGGCGATGTGGAGCA 59.610 55.000 0.00 0.00 34.54 4.26
36 37 2.887568 GCGATGTGGAGCACGAGG 60.888 66.667 0.00 0.00 37.14 4.63
85 86 6.109359 AGATTTGGAGTTCTCGTCCTTAATG 58.891 40.000 0.00 0.00 34.86 1.90
91 92 4.087182 AGTTCTCGTCCTTAATGAGGTCA 58.913 43.478 0.00 0.00 46.39 4.02
210 216 4.074526 GGAGCGGAGAGTGCAGCA 62.075 66.667 0.00 0.00 33.85 4.41
283 289 3.691342 CCCGGAGCCAGACGACAA 61.691 66.667 0.73 0.00 0.00 3.18
339 345 2.048603 GCATTGGTCAGGCAGTCCC 61.049 63.158 0.00 0.00 0.00 4.46
341 347 3.628646 ATTGGTCAGGCAGTCCCGC 62.629 63.158 0.00 0.00 39.21 6.13
353 359 3.068064 TCCCGCAGCTCGATGTCA 61.068 61.111 7.07 0.00 41.67 3.58
379 388 4.790962 CTGCATGCCGGAGCTGGT 62.791 66.667 16.68 0.00 40.80 4.00
469 478 2.627791 CACTTTCGGTGGTGCATGA 58.372 52.632 0.00 0.00 41.90 3.07
473 482 2.344878 TTTCGGTGGTGCATGACCCA 62.345 55.000 10.63 0.00 45.45 4.51
509 519 2.282462 CACTTGTGGCTGTCCCCC 60.282 66.667 0.00 0.00 0.00 5.40
528 538 1.679944 CCGCCATTCATTGACCTCACT 60.680 52.381 0.00 0.00 0.00 3.41
541 551 3.613265 CTCACTGAGGATGACGACG 57.387 57.895 0.00 0.00 0.00 5.12
556 566 1.073964 CGACGAAGACTAGGACGACA 58.926 55.000 0.00 0.00 0.00 4.35
633 955 8.793592 GTTCTAATTCAAGTTTAATGGACACCT 58.206 33.333 0.00 0.00 0.00 4.00
744 1070 4.395959 AGTTCAGACAAAACGGACTGTA 57.604 40.909 0.00 0.00 0.00 2.74
757 1083 2.485479 CGGACTGTATGAGATTTGGGGG 60.485 54.545 0.00 0.00 0.00 5.40
788 1115 3.580895 GGAATTGGCCTTTAAACTTCCCA 59.419 43.478 3.32 0.00 0.00 4.37
852 1184 2.275466 CTTCCACCTTTTCCCCTCCTA 58.725 52.381 0.00 0.00 0.00 2.94
945 1280 0.394938 TCAGTCAACCGCTGGCTAAA 59.605 50.000 0.00 0.00 38.17 1.85
1067 1414 3.979497 CCCAACCCCTTTCCCGCT 61.979 66.667 0.00 0.00 0.00 5.52
1069 1416 2.757077 CAACCCCTTTCCCGCTCT 59.243 61.111 0.00 0.00 0.00 4.09
1071 1418 1.846124 AACCCCTTTCCCGCTCTCA 60.846 57.895 0.00 0.00 0.00 3.27
1151 1507 0.036388 AACAAGATCATCCACGCCGT 60.036 50.000 0.00 0.00 0.00 5.68
1205 1570 0.242825 TTCTCCGACGACGCTGAATT 59.757 50.000 0.64 0.00 38.29 2.17
1298 1669 2.201490 CTCCCCATCCTCCGGCTA 59.799 66.667 0.00 0.00 0.00 3.93
1699 2106 1.134699 TCTTGGATGACATGGAGCGAC 60.135 52.381 0.00 0.00 0.00 5.19
1784 2196 7.270579 GGTTTATGCGTCTAACAATTTGAGAAC 59.729 37.037 2.79 0.00 0.00 3.01
1811 2223 2.223377 CCTGGTTGTTGTTTAGACGAGC 59.777 50.000 0.00 0.00 0.00 5.03
1865 2277 1.374758 GTGGTCGACAAGCAGGGAG 60.375 63.158 18.91 0.00 35.67 4.30
1895 2307 1.542915 AGATGTCTTGCAAATGCGCTT 59.457 42.857 9.73 0.00 45.83 4.68
1922 2334 2.519771 AGATGGGAAGCTTGCAATCA 57.480 45.000 30.31 16.11 31.94 2.57
1963 2380 4.518970 TGCTGTCCTTTCCTGTACATTTTC 59.481 41.667 0.00 0.00 0.00 2.29
2092 2511 9.202273 GATTGTGCATGGTTTTATTCTTTTACA 57.798 29.630 0.00 0.00 0.00 2.41
2103 2522 9.406828 GTTTTATTCTTTTACACCTGACAATCC 57.593 33.333 0.00 0.00 0.00 3.01
2117 2536 1.780309 ACAATCCAGAACCCCAAGACA 59.220 47.619 0.00 0.00 0.00 3.41
2278 2699 7.091443 TCCAGTTTTTACACACAAATTCGTTT 58.909 30.769 0.00 0.00 0.00 3.60
2327 2748 4.287067 TCTTCTAATTGCTCCTCAAGTGGT 59.713 41.667 0.00 0.00 38.22 4.16
2387 2808 5.818678 TGTTTGTAGTCTATCACTTGGGT 57.181 39.130 0.00 0.00 36.43 4.51
2458 2879 2.547299 AGCTCAGCCTCATAGCATTC 57.453 50.000 0.00 0.00 38.75 2.67
2470 2891 6.488006 GCCTCATAGCATTCTTATGGAAAAGA 59.512 38.462 0.00 0.00 37.49 2.52
2472 2893 8.566260 CCTCATAGCATTCTTATGGAAAAGAAG 58.434 37.037 5.41 0.38 45.88 2.85
2513 2934 8.816640 ATTGTTTTAAAGCGAGATTGTTTCAT 57.183 26.923 0.00 0.00 0.00 2.57
2514 2935 7.851822 TGTTTTAAAGCGAGATTGTTTCATC 57.148 32.000 0.00 0.00 0.00 2.92
2701 3150 6.914757 GGCTTGTGCTAAATTGTTCAGATATC 59.085 38.462 0.00 0.00 39.59 1.63
2922 3381 5.395611 ACTACCTCTGTCCTTTCTGTTACT 58.604 41.667 0.00 0.00 0.00 2.24
3056 5153 0.035739 TTAGACGGCCACTTGGGAAC 59.964 55.000 2.24 0.00 40.01 3.62
3118 5215 5.278758 GGCATACAAACTACAAGGCTTTTGA 60.279 40.000 13.87 1.09 33.90 2.69
3131 5228 7.381323 ACAAGGCTTTTGAGAATAAATCCTTG 58.619 34.615 20.65 20.65 44.87 3.61
3155 5252 6.554982 TGAAGATGTATCTAAGGCATACTGGT 59.445 38.462 0.00 0.00 35.76 4.00
3180 5277 0.116342 TGTCCAAGGGAGCTCCACTA 59.884 55.000 33.29 11.44 38.24 2.74
3233 5330 4.851639 AACTGGCATATCCAAGAGACTT 57.148 40.909 0.00 0.00 46.01 3.01
3279 5437 7.669427 TGTGATGTTCCTGAGCAAATTATTTT 58.331 30.769 0.00 0.00 0.00 1.82
3287 5445 9.995003 TTCCTGAGCAAATTATTTTGTTACATT 57.005 25.926 10.80 0.00 43.43 2.71
3354 5951 3.430895 CCAAACAACAATTCTCTGCATGC 59.569 43.478 11.82 11.82 0.00 4.06
3489 6086 5.361427 TCGGAATTAGAATTATTGCCGTCA 58.639 37.500 10.74 0.00 38.67 4.35
3674 6339 5.496556 CATGTACAAACCTCCAGTAATGGA 58.503 41.667 12.11 12.11 36.40 3.41
3714 6391 6.377912 AGAGTAAGTATAGGAGCTTCATGGT 58.622 40.000 0.00 0.00 0.00 3.55
3743 6420 3.773418 TGGGTGAACCAGACGAAATAA 57.227 42.857 1.16 0.00 46.80 1.40
3744 6421 4.295141 TGGGTGAACCAGACGAAATAAT 57.705 40.909 1.16 0.00 46.80 1.28
3747 6424 4.881850 GGGTGAACCAGACGAAATAATGAT 59.118 41.667 1.16 0.00 39.85 2.45
3759 6441 9.698309 AGACGAAATAATGATGAACTATCGAAT 57.302 29.630 0.00 0.00 38.71 3.34
3823 6505 3.374098 CCTCATCCTCCCTTCTCTCTTCT 60.374 52.174 0.00 0.00 0.00 2.85
3842 6524 6.088824 TCTTCTACGTCGTTGAAAATCCTAC 58.911 40.000 19.93 0.00 28.50 3.18
3843 6525 5.375417 TCTACGTCGTTGAAAATCCTACA 57.625 39.130 1.78 0.00 0.00 2.74
3844 6526 5.957798 TCTACGTCGTTGAAAATCCTACAT 58.042 37.500 1.78 0.00 0.00 2.29
3845 6527 4.921470 ACGTCGTTGAAAATCCTACATG 57.079 40.909 0.00 0.00 0.00 3.21
3885 6787 8.716646 AACAATACAATCTCATGTCATCGTTA 57.283 30.769 0.00 0.00 34.75 3.18
3891 6793 6.533012 ACAATCTCATGTCATCGTTAACAGAG 59.467 38.462 6.39 0.00 0.00 3.35
3961 6863 0.963856 TGACCGAGTGAGCGTATGGT 60.964 55.000 0.00 0.00 0.00 3.55
4011 6913 9.667107 CAGAATCAAAGTTAGTGGGTTATCTTA 57.333 33.333 0.00 0.00 0.00 2.10
4089 6991 4.590647 TGAAATGGGCTGGTTGTTTTATCA 59.409 37.500 0.00 0.00 0.00 2.15
4098 7000 7.821846 GGGCTGGTTGTTTTATCATTGAATTTA 59.178 33.333 0.00 0.00 0.00 1.40
4115 7017 1.522668 TTATCGCTGGTGCATATGCC 58.477 50.000 24.54 15.25 41.18 4.40
4163 7065 3.319122 GGTTGGAAGAAGCTGTGATGTTT 59.681 43.478 0.00 0.00 0.00 2.83
4164 7066 4.518970 GGTTGGAAGAAGCTGTGATGTTTA 59.481 41.667 0.00 0.00 0.00 2.01
4165 7067 5.183904 GGTTGGAAGAAGCTGTGATGTTTAT 59.816 40.000 0.00 0.00 0.00 1.40
4166 7068 6.374333 GGTTGGAAGAAGCTGTGATGTTTATA 59.626 38.462 0.00 0.00 0.00 0.98
4167 7069 7.414540 GGTTGGAAGAAGCTGTGATGTTTATAG 60.415 40.741 0.00 0.00 0.00 1.31
4168 7070 6.946340 TGGAAGAAGCTGTGATGTTTATAGA 58.054 36.000 0.00 0.00 0.00 1.98
4169 7071 7.394016 TGGAAGAAGCTGTGATGTTTATAGAA 58.606 34.615 0.00 0.00 0.00 2.10
4170 7072 7.550551 TGGAAGAAGCTGTGATGTTTATAGAAG 59.449 37.037 0.00 0.00 0.00 2.85
4171 7073 7.550906 GGAAGAAGCTGTGATGTTTATAGAAGT 59.449 37.037 0.00 0.00 0.00 3.01
4172 7074 7.840342 AGAAGCTGTGATGTTTATAGAAGTG 57.160 36.000 0.00 0.00 0.00 3.16
4173 7075 6.314896 AGAAGCTGTGATGTTTATAGAAGTGC 59.685 38.462 0.00 0.00 0.00 4.40
4174 7076 5.491070 AGCTGTGATGTTTATAGAAGTGCA 58.509 37.500 0.00 0.00 0.00 4.57
4175 7077 6.118170 AGCTGTGATGTTTATAGAAGTGCAT 58.882 36.000 0.00 0.00 0.00 3.96
4176 7078 6.037940 AGCTGTGATGTTTATAGAAGTGCATG 59.962 38.462 0.00 0.00 0.00 4.06
4177 7079 6.122850 TGTGATGTTTATAGAAGTGCATGC 57.877 37.500 11.82 11.82 0.00 4.06
4178 7080 5.882000 TGTGATGTTTATAGAAGTGCATGCT 59.118 36.000 20.33 0.00 0.00 3.79
4179 7081 6.037500 TGTGATGTTTATAGAAGTGCATGCTC 59.962 38.462 20.33 15.94 0.00 4.26
4180 7082 6.259608 GTGATGTTTATAGAAGTGCATGCTCT 59.740 38.462 20.33 18.23 0.00 4.09
4181 7083 7.439356 GTGATGTTTATAGAAGTGCATGCTCTA 59.561 37.037 21.70 18.17 0.00 2.43
4182 7084 7.654923 TGATGTTTATAGAAGTGCATGCTCTAG 59.345 37.037 21.70 0.00 0.00 2.43
4183 7085 5.755375 TGTTTATAGAAGTGCATGCTCTAGC 59.245 40.000 21.70 16.29 42.50 3.42
4184 7086 2.898729 TAGAAGTGCATGCTCTAGCC 57.101 50.000 21.70 13.81 41.18 3.93
4185 7087 0.907486 AGAAGTGCATGCTCTAGCCA 59.093 50.000 21.70 0.00 41.18 4.75
4186 7088 1.280133 AGAAGTGCATGCTCTAGCCAA 59.720 47.619 21.70 0.00 41.18 4.52
4187 7089 2.092538 AGAAGTGCATGCTCTAGCCAAT 60.093 45.455 21.70 5.92 41.18 3.16
4188 7090 1.676746 AGTGCATGCTCTAGCCAATG 58.323 50.000 20.22 0.00 41.18 2.82
4189 7091 0.030369 GTGCATGCTCTAGCCAATGC 59.970 55.000 20.33 16.33 45.25 3.56
4190 7092 2.411535 GCATGCTCTAGCCAATGCA 58.588 52.632 11.37 0.00 44.74 3.96
4191 7093 0.742505 GCATGCTCTAGCCAATGCAA 59.257 50.000 11.37 0.00 44.74 4.08
4192 7094 1.135527 GCATGCTCTAGCCAATGCAAA 59.864 47.619 11.37 0.00 44.74 3.68
4193 7095 2.223971 GCATGCTCTAGCCAATGCAAAT 60.224 45.455 11.37 0.00 44.74 2.32
4194 7096 3.005050 GCATGCTCTAGCCAATGCAAATA 59.995 43.478 11.37 0.00 44.74 1.40
4195 7097 4.500205 GCATGCTCTAGCCAATGCAAATAA 60.500 41.667 11.37 0.00 44.74 1.40
4196 7098 5.593968 CATGCTCTAGCCAATGCAAATAAA 58.406 37.500 0.00 0.00 41.13 1.40
4197 7099 5.657826 TGCTCTAGCCAATGCAAATAAAA 57.342 34.783 0.00 0.00 41.13 1.52
4198 7100 5.653507 TGCTCTAGCCAATGCAAATAAAAG 58.346 37.500 0.00 0.00 41.13 2.27
4199 7101 5.418524 TGCTCTAGCCAATGCAAATAAAAGA 59.581 36.000 0.00 0.00 41.13 2.52
4200 7102 5.745769 GCTCTAGCCAATGCAAATAAAAGAC 59.254 40.000 0.00 0.00 41.13 3.01
4201 7103 6.207691 TCTAGCCAATGCAAATAAAAGACC 57.792 37.500 0.00 0.00 41.13 3.85
4202 7104 3.848726 AGCCAATGCAAATAAAAGACCG 58.151 40.909 0.00 0.00 41.13 4.79
4203 7105 3.509575 AGCCAATGCAAATAAAAGACCGA 59.490 39.130 0.00 0.00 41.13 4.69
4204 7106 4.160252 AGCCAATGCAAATAAAAGACCGAT 59.840 37.500 0.00 0.00 41.13 4.18
4205 7107 4.504097 GCCAATGCAAATAAAAGACCGATC 59.496 41.667 0.00 0.00 37.47 3.69
4206 7108 5.679638 GCCAATGCAAATAAAAGACCGATCT 60.680 40.000 0.00 0.00 37.47 2.75
4207 7109 5.745294 CCAATGCAAATAAAAGACCGATCTG 59.255 40.000 0.00 0.00 34.48 2.90
4208 7110 6.404623 CCAATGCAAATAAAAGACCGATCTGA 60.405 38.462 0.00 0.00 34.48 3.27
4209 7111 6.949352 ATGCAAATAAAAGACCGATCTGAT 57.051 33.333 0.00 0.00 34.48 2.90
4210 7112 8.344831 CAATGCAAATAAAAGACCGATCTGATA 58.655 33.333 0.00 0.00 34.48 2.15
4211 7113 7.482654 TGCAAATAAAAGACCGATCTGATAG 57.517 36.000 0.00 0.00 34.48 2.08
4212 7114 7.272244 TGCAAATAAAAGACCGATCTGATAGA 58.728 34.615 0.00 0.00 34.48 1.98
4213 7115 7.768582 TGCAAATAAAAGACCGATCTGATAGAA 59.231 33.333 0.00 0.00 34.48 2.10
4214 7116 8.279103 GCAAATAAAAGACCGATCTGATAGAAG 58.721 37.037 0.00 0.00 34.48 2.85
4215 7117 9.534565 CAAATAAAAGACCGATCTGATAGAAGA 57.465 33.333 0.00 0.00 34.48 2.87
4216 7118 9.757227 AAATAAAAGACCGATCTGATAGAAGAG 57.243 33.333 0.00 0.00 34.48 2.85
4217 7119 8.698973 ATAAAAGACCGATCTGATAGAAGAGA 57.301 34.615 0.00 0.00 34.48 3.10
4218 7120 6.385649 AAAGACCGATCTGATAGAAGAGAC 57.614 41.667 0.00 0.00 34.48 3.36
4219 7121 5.304686 AGACCGATCTGATAGAAGAGACT 57.695 43.478 0.00 0.00 32.29 3.24
4220 7122 6.428083 AGACCGATCTGATAGAAGAGACTA 57.572 41.667 0.00 0.00 32.29 2.59
4221 7123 6.464222 AGACCGATCTGATAGAAGAGACTAG 58.536 44.000 0.00 0.00 32.29 2.57
4222 7124 5.556915 ACCGATCTGATAGAAGAGACTAGG 58.443 45.833 0.00 0.00 0.00 3.02
4223 7125 5.308497 ACCGATCTGATAGAAGAGACTAGGA 59.692 44.000 0.00 0.00 0.00 2.94
4224 7126 6.183361 ACCGATCTGATAGAAGAGACTAGGAA 60.183 42.308 0.00 0.00 0.00 3.36
4225 7127 6.371548 CCGATCTGATAGAAGAGACTAGGAAG 59.628 46.154 0.00 0.00 0.00 3.46
4226 7128 6.128282 CGATCTGATAGAAGAGACTAGGAAGC 60.128 46.154 0.00 0.00 0.00 3.86
4227 7129 6.007485 TCTGATAGAAGAGACTAGGAAGCA 57.993 41.667 0.00 0.00 0.00 3.91
4228 7130 5.825679 TCTGATAGAAGAGACTAGGAAGCAC 59.174 44.000 0.00 0.00 0.00 4.40
4229 7131 5.510430 TGATAGAAGAGACTAGGAAGCACA 58.490 41.667 0.00 0.00 0.00 4.57
4230 7132 6.132658 TGATAGAAGAGACTAGGAAGCACAT 58.867 40.000 0.00 0.00 0.00 3.21
4231 7133 6.609212 TGATAGAAGAGACTAGGAAGCACATT 59.391 38.462 0.00 0.00 0.00 2.71
4232 7134 7.780271 TGATAGAAGAGACTAGGAAGCACATTA 59.220 37.037 0.00 0.00 0.00 1.90
4233 7135 8.719645 ATAGAAGAGACTAGGAAGCACATTAT 57.280 34.615 0.00 0.00 0.00 1.28
4234 7136 9.815306 ATAGAAGAGACTAGGAAGCACATTATA 57.185 33.333 0.00 0.00 0.00 0.98
4235 7137 7.947282 AGAAGAGACTAGGAAGCACATTATAC 58.053 38.462 0.00 0.00 0.00 1.47
4236 7138 6.320494 AGAGACTAGGAAGCACATTATACG 57.680 41.667 0.00 0.00 0.00 3.06
4237 7139 5.828859 AGAGACTAGGAAGCACATTATACGT 59.171 40.000 0.00 0.00 0.00 3.57
4238 7140 6.016943 AGAGACTAGGAAGCACATTATACGTC 60.017 42.308 0.00 0.00 0.00 4.34
4239 7141 5.593095 AGACTAGGAAGCACATTATACGTCA 59.407 40.000 0.00 0.00 0.00 4.35
4240 7142 6.096423 AGACTAGGAAGCACATTATACGTCAA 59.904 38.462 0.00 0.00 0.00 3.18
4241 7143 6.040878 ACTAGGAAGCACATTATACGTCAAC 58.959 40.000 0.00 0.00 0.00 3.18
4242 7144 4.827692 AGGAAGCACATTATACGTCAACA 58.172 39.130 0.00 0.00 0.00 3.33
4243 7145 4.630069 AGGAAGCACATTATACGTCAACAC 59.370 41.667 0.00 0.00 0.00 3.32
4244 7146 4.630069 GGAAGCACATTATACGTCAACACT 59.370 41.667 0.00 0.00 0.00 3.55
4245 7147 5.808540 GGAAGCACATTATACGTCAACACTA 59.191 40.000 0.00 0.00 0.00 2.74
4246 7148 6.237755 GGAAGCACATTATACGTCAACACTAC 60.238 42.308 0.00 0.00 0.00 2.73
4247 7149 5.962433 AGCACATTATACGTCAACACTACT 58.038 37.500 0.00 0.00 0.00 2.57
4248 7150 7.092137 AGCACATTATACGTCAACACTACTA 57.908 36.000 0.00 0.00 0.00 1.82
4249 7151 7.194278 AGCACATTATACGTCAACACTACTAG 58.806 38.462 0.00 0.00 0.00 2.57
4250 7152 6.074994 GCACATTATACGTCAACACTACTAGC 60.075 42.308 0.00 0.00 0.00 3.42
4251 7153 7.194278 CACATTATACGTCAACACTACTAGCT 58.806 38.462 0.00 0.00 0.00 3.32
4252 7154 8.340443 CACATTATACGTCAACACTACTAGCTA 58.660 37.037 0.00 0.00 0.00 3.32
4253 7155 8.896744 ACATTATACGTCAACACTACTAGCTAA 58.103 33.333 0.00 0.00 0.00 3.09
4254 7156 9.167239 CATTATACGTCAACACTACTAGCTAAC 57.833 37.037 0.00 0.00 0.00 2.34
4255 7157 6.748333 ATACGTCAACACTACTAGCTAACA 57.252 37.500 0.00 0.00 0.00 2.41
4256 7158 5.443185 ACGTCAACACTACTAGCTAACAA 57.557 39.130 0.00 0.00 0.00 2.83
4257 7159 6.022163 ACGTCAACACTACTAGCTAACAAT 57.978 37.500 0.00 0.00 0.00 2.71
4258 7160 7.149569 ACGTCAACACTACTAGCTAACAATA 57.850 36.000 0.00 0.00 0.00 1.90
4259 7161 7.249147 ACGTCAACACTACTAGCTAACAATAG 58.751 38.462 0.00 0.00 0.00 1.73
4260 7162 7.094463 ACGTCAACACTACTAGCTAACAATAGT 60.094 37.037 0.00 0.00 36.28 2.12
4261 7163 7.754027 CGTCAACACTACTAGCTAACAATAGTT 59.246 37.037 0.00 0.00 41.74 2.24
4262 7164 9.420551 GTCAACACTACTAGCTAACAATAGTTT 57.579 33.333 0.00 0.00 39.15 2.66
4263 7165 9.991906 TCAACACTACTAGCTAACAATAGTTTT 57.008 29.630 0.00 0.00 39.15 2.43
4280 7182 9.974750 CAATAGTTTTCTTAATCTTTCGTCTCC 57.025 33.333 0.00 0.00 0.00 3.71
4281 7183 9.720769 AATAGTTTTCTTAATCTTTCGTCTCCA 57.279 29.630 0.00 0.00 0.00 3.86
4282 7184 9.892130 ATAGTTTTCTTAATCTTTCGTCTCCAT 57.108 29.630 0.00 0.00 0.00 3.41
4283 7185 8.622948 AGTTTTCTTAATCTTTCGTCTCCATT 57.377 30.769 0.00 0.00 0.00 3.16
4284 7186 8.507249 AGTTTTCTTAATCTTTCGTCTCCATTG 58.493 33.333 0.00 0.00 0.00 2.82
4285 7187 7.979444 TTTCTTAATCTTTCGTCTCCATTGT 57.021 32.000 0.00 0.00 0.00 2.71
4286 7188 7.979444 TTCTTAATCTTTCGTCTCCATTGTT 57.021 32.000 0.00 0.00 0.00 2.83
4287 7189 9.496873 TTTCTTAATCTTTCGTCTCCATTGTTA 57.503 29.630 0.00 0.00 0.00 2.41
4288 7190 8.475331 TCTTAATCTTTCGTCTCCATTGTTAC 57.525 34.615 0.00 0.00 0.00 2.50
4289 7191 8.311836 TCTTAATCTTTCGTCTCCATTGTTACT 58.688 33.333 0.00 0.00 0.00 2.24
4290 7192 8.842358 TTAATCTTTCGTCTCCATTGTTACTT 57.158 30.769 0.00 0.00 0.00 2.24
4291 7193 6.969828 ATCTTTCGTCTCCATTGTTACTTC 57.030 37.500 0.00 0.00 0.00 3.01
4292 7194 6.097915 TCTTTCGTCTCCATTGTTACTTCT 57.902 37.500 0.00 0.00 0.00 2.85
4293 7195 6.157211 TCTTTCGTCTCCATTGTTACTTCTC 58.843 40.000 0.00 0.00 0.00 2.87
4294 7196 4.092771 TCGTCTCCATTGTTACTTCTCG 57.907 45.455 0.00 0.00 0.00 4.04
4295 7197 3.504906 TCGTCTCCATTGTTACTTCTCGT 59.495 43.478 0.00 0.00 0.00 4.18
4296 7198 3.608506 CGTCTCCATTGTTACTTCTCGTG 59.391 47.826 0.00 0.00 0.00 4.35
4297 7199 3.368236 GTCTCCATTGTTACTTCTCGTGC 59.632 47.826 0.00 0.00 0.00 5.34
4298 7200 3.006430 TCTCCATTGTTACTTCTCGTGCA 59.994 43.478 0.00 0.00 0.00 4.57
4299 7201 3.325870 TCCATTGTTACTTCTCGTGCAG 58.674 45.455 0.00 0.00 0.00 4.41
4300 7202 3.006430 TCCATTGTTACTTCTCGTGCAGA 59.994 43.478 0.00 0.00 0.00 4.26
4301 7203 3.935203 CCATTGTTACTTCTCGTGCAGAT 59.065 43.478 0.00 0.00 0.00 2.90
4302 7204 4.393062 CCATTGTTACTTCTCGTGCAGATT 59.607 41.667 0.00 0.00 0.00 2.40
4303 7205 4.990543 TTGTTACTTCTCGTGCAGATTG 57.009 40.909 0.00 0.00 0.00 2.67
4304 7206 4.251543 TGTTACTTCTCGTGCAGATTGA 57.748 40.909 0.00 0.00 0.00 2.57
4305 7207 4.627058 TGTTACTTCTCGTGCAGATTGAA 58.373 39.130 0.00 0.00 0.00 2.69
4306 7208 5.237815 TGTTACTTCTCGTGCAGATTGAAT 58.762 37.500 0.00 0.00 0.00 2.57
4307 7209 5.700832 TGTTACTTCTCGTGCAGATTGAATT 59.299 36.000 0.00 0.00 0.00 2.17
4308 7210 4.675190 ACTTCTCGTGCAGATTGAATTG 57.325 40.909 0.00 0.00 0.00 2.32
4309 7211 4.318332 ACTTCTCGTGCAGATTGAATTGA 58.682 39.130 0.00 0.00 0.00 2.57
4310 7212 4.756642 ACTTCTCGTGCAGATTGAATTGAA 59.243 37.500 0.00 0.00 0.00 2.69
4311 7213 4.668576 TCTCGTGCAGATTGAATTGAAC 57.331 40.909 0.00 0.00 0.00 3.18
4312 7214 3.436704 TCTCGTGCAGATTGAATTGAACC 59.563 43.478 0.00 0.00 0.00 3.62
4313 7215 3.145286 TCGTGCAGATTGAATTGAACCA 58.855 40.909 0.00 0.00 0.00 3.67
4314 7216 3.189080 TCGTGCAGATTGAATTGAACCAG 59.811 43.478 0.00 0.00 0.00 4.00
4315 7217 3.189080 CGTGCAGATTGAATTGAACCAGA 59.811 43.478 0.00 0.00 0.00 3.86
4316 7218 4.320421 CGTGCAGATTGAATTGAACCAGAA 60.320 41.667 0.00 0.00 0.00 3.02
4317 7219 5.531634 GTGCAGATTGAATTGAACCAGAAA 58.468 37.500 0.00 0.00 0.00 2.52
4318 7220 5.403466 GTGCAGATTGAATTGAACCAGAAAC 59.597 40.000 0.00 0.00 0.00 2.78
4319 7221 4.618489 GCAGATTGAATTGAACCAGAAACG 59.382 41.667 0.00 0.00 0.00 3.60
4320 7222 5.562696 GCAGATTGAATTGAACCAGAAACGA 60.563 40.000 0.00 0.00 0.00 3.85
4321 7223 5.853282 CAGATTGAATTGAACCAGAAACGAC 59.147 40.000 0.00 0.00 0.00 4.34
4322 7224 4.561735 TTGAATTGAACCAGAAACGACC 57.438 40.909 0.00 0.00 0.00 4.79
4323 7225 2.882137 TGAATTGAACCAGAAACGACCC 59.118 45.455 0.00 0.00 0.00 4.46
4324 7226 2.951229 ATTGAACCAGAAACGACCCT 57.049 45.000 0.00 0.00 0.00 4.34
4325 7227 2.721425 TTGAACCAGAAACGACCCTT 57.279 45.000 0.00 0.00 0.00 3.95
4326 7228 3.842007 TTGAACCAGAAACGACCCTTA 57.158 42.857 0.00 0.00 0.00 2.69
4327 7229 4.360951 TTGAACCAGAAACGACCCTTAT 57.639 40.909 0.00 0.00 0.00 1.73
4328 7230 4.360951 TGAACCAGAAACGACCCTTATT 57.639 40.909 0.00 0.00 0.00 1.40
4329 7231 4.069304 TGAACCAGAAACGACCCTTATTG 58.931 43.478 0.00 0.00 0.00 1.90
4330 7232 3.067684 ACCAGAAACGACCCTTATTGG 57.932 47.619 0.00 0.00 0.00 3.16
4331 7233 2.640826 ACCAGAAACGACCCTTATTGGA 59.359 45.455 0.00 0.00 38.35 3.53
4332 7234 3.073356 ACCAGAAACGACCCTTATTGGAA 59.927 43.478 0.00 0.00 38.35 3.53
4333 7235 3.689649 CCAGAAACGACCCTTATTGGAAG 59.310 47.826 0.00 0.00 38.35 3.46
4334 7236 4.564821 CCAGAAACGACCCTTATTGGAAGA 60.565 45.833 0.00 0.00 38.35 2.87
4335 7237 4.392138 CAGAAACGACCCTTATTGGAAGAC 59.608 45.833 0.00 0.00 38.35 3.01
4336 7238 2.667473 ACGACCCTTATTGGAAGACG 57.333 50.000 0.00 0.00 38.35 4.18
4337 7239 1.897802 ACGACCCTTATTGGAAGACGT 59.102 47.619 0.00 0.00 38.35 4.34
4338 7240 3.091545 ACGACCCTTATTGGAAGACGTA 58.908 45.455 0.00 0.00 38.35 3.57
4339 7241 3.703052 ACGACCCTTATTGGAAGACGTAT 59.297 43.478 0.00 0.00 38.35 3.06
4340 7242 4.202090 ACGACCCTTATTGGAAGACGTATC 60.202 45.833 0.00 0.00 38.35 2.24
4341 7243 4.629092 GACCCTTATTGGAAGACGTATCC 58.371 47.826 11.94 11.94 38.35 2.59
4342 7244 4.296056 ACCCTTATTGGAAGACGTATCCT 58.704 43.478 17.92 4.64 37.85 3.24
4343 7245 4.101119 ACCCTTATTGGAAGACGTATCCTG 59.899 45.833 17.92 6.14 37.85 3.86
4344 7246 4.058817 CCTTATTGGAAGACGTATCCTGC 58.941 47.826 17.92 0.00 37.85 4.85
4345 7247 2.622064 ATTGGAAGACGTATCCTGCC 57.378 50.000 17.92 7.06 37.85 4.85
4346 7248 1.568504 TTGGAAGACGTATCCTGCCT 58.431 50.000 17.92 0.00 37.85 4.75
4347 7249 0.824109 TGGAAGACGTATCCTGCCTG 59.176 55.000 17.92 0.00 37.85 4.85
4348 7250 0.824759 GGAAGACGTATCCTGCCTGT 59.175 55.000 11.64 0.00 33.98 4.00
4349 7251 1.202428 GGAAGACGTATCCTGCCTGTC 60.202 57.143 11.64 0.00 33.98 3.51
4350 7252 0.456221 AAGACGTATCCTGCCTGTCG 59.544 55.000 0.00 0.00 34.82 4.35
4351 7253 0.393944 AGACGTATCCTGCCTGTCGA 60.394 55.000 0.00 0.00 34.82 4.20
4352 7254 0.454600 GACGTATCCTGCCTGTCGAA 59.545 55.000 0.00 0.00 0.00 3.71
4353 7255 0.892755 ACGTATCCTGCCTGTCGAAA 59.107 50.000 0.00 0.00 0.00 3.46
4354 7256 1.135083 ACGTATCCTGCCTGTCGAAAG 60.135 52.381 0.00 0.00 0.00 2.62
4355 7257 1.134367 CGTATCCTGCCTGTCGAAAGA 59.866 52.381 3.47 0.00 38.16 2.52
4356 7258 2.223829 CGTATCCTGCCTGTCGAAAGAT 60.224 50.000 3.47 0.00 45.19 2.40
4357 7259 2.611225 ATCCTGCCTGTCGAAAGATC 57.389 50.000 3.47 0.00 45.19 2.75
4358 7260 1.561643 TCCTGCCTGTCGAAAGATCT 58.438 50.000 3.47 0.00 45.19 2.75
4359 7261 1.902508 TCCTGCCTGTCGAAAGATCTT 59.097 47.619 3.47 0.88 45.19 2.40
4360 7262 2.005451 CCTGCCTGTCGAAAGATCTTG 58.995 52.381 9.17 0.00 45.19 3.02
4361 7263 2.354103 CCTGCCTGTCGAAAGATCTTGA 60.354 50.000 9.17 0.00 45.19 3.02
4362 7264 3.529533 CTGCCTGTCGAAAGATCTTGAT 58.470 45.455 9.17 0.00 45.19 2.57
4363 7265 3.937706 CTGCCTGTCGAAAGATCTTGATT 59.062 43.478 9.17 0.00 45.19 2.57
4364 7266 4.326826 TGCCTGTCGAAAGATCTTGATTT 58.673 39.130 9.17 0.00 45.19 2.17
4365 7267 5.487433 TGCCTGTCGAAAGATCTTGATTTA 58.513 37.500 9.17 0.00 45.19 1.40
4366 7268 5.937540 TGCCTGTCGAAAGATCTTGATTTAA 59.062 36.000 9.17 0.00 45.19 1.52
4367 7269 6.092670 TGCCTGTCGAAAGATCTTGATTTAAG 59.907 38.462 9.17 3.37 45.19 1.85
4368 7270 6.457528 GCCTGTCGAAAGATCTTGATTTAAGG 60.458 42.308 9.17 12.67 45.19 2.69
4369 7271 6.422776 TGTCGAAAGATCTTGATTTAAGGC 57.577 37.500 9.17 0.00 45.19 4.35
4370 7272 6.173339 TGTCGAAAGATCTTGATTTAAGGCT 58.827 36.000 9.17 0.00 45.19 4.58
4371 7273 6.092670 TGTCGAAAGATCTTGATTTAAGGCTG 59.907 38.462 9.17 0.00 45.19 4.85
4372 7274 6.313905 GTCGAAAGATCTTGATTTAAGGCTGA 59.686 38.462 9.17 0.00 45.19 4.26
4373 7275 7.011857 GTCGAAAGATCTTGATTTAAGGCTGAT 59.988 37.037 9.17 0.00 45.19 2.90
4374 7276 7.011763 TCGAAAGATCTTGATTTAAGGCTGATG 59.988 37.037 9.17 0.00 34.09 3.07
4375 7277 7.201679 CGAAAGATCTTGATTTAAGGCTGATGT 60.202 37.037 9.17 0.00 37.01 3.06
4376 7278 7.951347 AAGATCTTGATTTAAGGCTGATGTT 57.049 32.000 7.30 0.00 37.01 2.71
4377 7279 7.330900 AGATCTTGATTTAAGGCTGATGTTG 57.669 36.000 0.00 0.00 37.01 3.33
4378 7280 7.114754 AGATCTTGATTTAAGGCTGATGTTGA 58.885 34.615 0.00 0.00 37.01 3.18
4379 7281 7.613022 AGATCTTGATTTAAGGCTGATGTTGAA 59.387 33.333 0.00 0.00 37.01 2.69
4380 7282 7.707624 TCTTGATTTAAGGCTGATGTTGAAT 57.292 32.000 0.00 0.00 37.01 2.57
4381 7283 8.806429 TCTTGATTTAAGGCTGATGTTGAATA 57.194 30.769 0.00 0.00 37.01 1.75
4382 7284 8.677300 TCTTGATTTAAGGCTGATGTTGAATAC 58.323 33.333 0.00 0.00 37.01 1.89
4383 7285 7.015226 TGATTTAAGGCTGATGTTGAATACG 57.985 36.000 0.00 0.00 0.00 3.06
4384 7286 6.821160 TGATTTAAGGCTGATGTTGAATACGA 59.179 34.615 0.00 0.00 0.00 3.43
4385 7287 7.335673 TGATTTAAGGCTGATGTTGAATACGAA 59.664 33.333 0.00 0.00 0.00 3.85
4386 7288 7.624360 TTTAAGGCTGATGTTGAATACGAAT 57.376 32.000 0.00 0.00 0.00 3.34
4387 7289 8.725405 TTTAAGGCTGATGTTGAATACGAATA 57.275 30.769 0.00 0.00 0.00 1.75
4388 7290 6.851222 AAGGCTGATGTTGAATACGAATAG 57.149 37.500 0.00 0.00 0.00 1.73
4389 7291 5.300752 AGGCTGATGTTGAATACGAATAGG 58.699 41.667 0.00 0.00 0.00 2.57
4390 7292 5.070446 AGGCTGATGTTGAATACGAATAGGA 59.930 40.000 0.00 0.00 0.00 2.94
4391 7293 5.934625 GGCTGATGTTGAATACGAATAGGAT 59.065 40.000 0.00 0.00 0.00 3.24
4392 7294 6.091441 GGCTGATGTTGAATACGAATAGGATC 59.909 42.308 0.00 0.00 0.00 3.36
4393 7295 6.091441 GCTGATGTTGAATACGAATAGGATCC 59.909 42.308 2.48 2.48 0.00 3.36
4394 7296 7.303182 TGATGTTGAATACGAATAGGATCCT 57.697 36.000 20.48 20.48 0.00 3.24
4395 7297 8.417273 TGATGTTGAATACGAATAGGATCCTA 57.583 34.615 23.76 23.76 0.00 2.94
4396 7298 8.866093 TGATGTTGAATACGAATAGGATCCTAA 58.134 33.333 25.20 9.06 31.73 2.69
4397 7299 9.877178 GATGTTGAATACGAATAGGATCCTAAT 57.123 33.333 25.20 17.55 31.73 1.73
4402 7304 9.749340 TGAATACGAATAGGATCCTAATAGACA 57.251 33.333 25.20 14.12 31.73 3.41
4405 7307 9.922477 ATACGAATAGGATCCTAATAGACATGA 57.078 33.333 25.20 0.31 31.73 3.07
4406 7308 8.287439 ACGAATAGGATCCTAATAGACATGAG 57.713 38.462 25.20 8.33 31.73 2.90
4407 7309 7.891183 ACGAATAGGATCCTAATAGACATGAGT 59.109 37.037 25.20 8.90 31.73 3.41
4408 7310 8.744652 CGAATAGGATCCTAATAGACATGAGTT 58.255 37.037 25.20 10.23 31.73 3.01
4410 7312 9.607333 AATAGGATCCTAATAGACATGAGTTCA 57.393 33.333 25.20 0.00 31.73 3.18
4411 7313 9.781425 ATAGGATCCTAATAGACATGAGTTCAT 57.219 33.333 25.20 0.67 32.58 2.57
4413 7315 9.781425 AGGATCCTAATAGACATGAGTTCATAT 57.219 33.333 14.27 0.00 34.26 1.78
4417 7319 8.597167 TCCTAATAGACATGAGTTCATATTGGG 58.403 37.037 0.00 9.65 34.53 4.12
4418 7320 8.597167 CCTAATAGACATGAGTTCATATTGGGA 58.403 37.037 0.00 0.00 34.81 4.37
4421 7323 9.872684 AATAGACATGAGTTCATATTGGGAATT 57.127 29.630 0.00 0.00 34.26 2.17
4424 7326 9.872684 AGACATGAGTTCATATTGGGAATTAAT 57.127 29.630 0.00 0.00 34.26 1.40
4425 7327 9.903682 GACATGAGTTCATATTGGGAATTAATG 57.096 33.333 0.00 0.00 34.26 1.90
4426 7328 8.362639 ACATGAGTTCATATTGGGAATTAATGC 58.637 33.333 0.00 0.00 34.26 3.56
4427 7329 8.582437 CATGAGTTCATATTGGGAATTAATGCT 58.418 33.333 0.00 0.00 34.26 3.79
4428 7330 9.812347 ATGAGTTCATATTGGGAATTAATGCTA 57.188 29.630 0.00 0.00 34.26 3.49
4429 7331 9.639563 TGAGTTCATATTGGGAATTAATGCTAA 57.360 29.630 0.00 0.00 0.00 3.09
4450 7352 8.859090 TGCTAAATTTGATATACCTTGGATTGG 58.141 33.333 0.00 0.00 0.00 3.16
4451 7353 9.077885 GCTAAATTTGATATACCTTGGATTGGA 57.922 33.333 0.00 0.00 0.00 3.53
4453 7355 8.837099 AAATTTGATATACCTTGGATTGGACA 57.163 30.769 0.00 0.00 0.00 4.02
4454 7356 9.438163 AAATTTGATATACCTTGGATTGGACAT 57.562 29.630 0.00 0.00 0.00 3.06
4455 7357 9.438163 AATTTGATATACCTTGGATTGGACATT 57.562 29.630 0.00 0.00 0.00 2.71
4458 7360 9.519191 TTGATATACCTTGGATTGGACATTATG 57.481 33.333 0.00 0.00 0.00 1.90
4459 7361 7.611467 TGATATACCTTGGATTGGACATTATGC 59.389 37.037 0.00 0.00 0.00 3.14
4460 7362 3.299503 ACCTTGGATTGGACATTATGCC 58.700 45.455 0.00 0.00 0.00 4.40
4461 7363 3.052642 ACCTTGGATTGGACATTATGCCT 60.053 43.478 7.08 0.00 0.00 4.75
4462 7364 3.962718 CCTTGGATTGGACATTATGCCTT 59.037 43.478 7.08 0.00 0.00 4.35
4463 7365 4.038402 CCTTGGATTGGACATTATGCCTTC 59.962 45.833 7.08 4.80 0.00 3.46
4464 7366 4.248174 TGGATTGGACATTATGCCTTCA 57.752 40.909 7.08 0.00 0.00 3.02
4465 7367 4.608269 TGGATTGGACATTATGCCTTCAA 58.392 39.130 7.08 1.47 0.00 2.69
4466 7368 5.022122 TGGATTGGACATTATGCCTTCAAA 58.978 37.500 7.08 0.00 0.00 2.69
4467 7369 5.105392 TGGATTGGACATTATGCCTTCAAAC 60.105 40.000 7.08 0.53 0.00 2.93
4468 7370 5.127682 GGATTGGACATTATGCCTTCAAACT 59.872 40.000 7.08 0.00 0.00 2.66
4469 7371 5.643379 TTGGACATTATGCCTTCAAACTC 57.357 39.130 7.08 0.00 0.00 3.01
4470 7372 4.922206 TGGACATTATGCCTTCAAACTCT 58.078 39.130 7.08 0.00 0.00 3.24
4471 7373 5.324409 TGGACATTATGCCTTCAAACTCTT 58.676 37.500 7.08 0.00 0.00 2.85
4472 7374 5.774690 TGGACATTATGCCTTCAAACTCTTT 59.225 36.000 7.08 0.00 0.00 2.52
4473 7375 6.267471 TGGACATTATGCCTTCAAACTCTTTT 59.733 34.615 7.08 0.00 0.00 2.27
4474 7376 7.154656 GGACATTATGCCTTCAAACTCTTTTT 58.845 34.615 0.00 0.00 0.00 1.94
4475 7377 7.116805 GGACATTATGCCTTCAAACTCTTTTTG 59.883 37.037 0.00 0.00 0.00 2.44
4476 7378 7.500141 ACATTATGCCTTCAAACTCTTTTTGT 58.500 30.769 0.00 0.00 0.00 2.83
4477 7379 7.439056 ACATTATGCCTTCAAACTCTTTTTGTG 59.561 33.333 0.00 0.00 0.00 3.33
4478 7380 4.122143 TGCCTTCAAACTCTTTTTGTGG 57.878 40.909 0.00 0.00 0.00 4.17
4479 7381 3.766591 TGCCTTCAAACTCTTTTTGTGGA 59.233 39.130 12.31 0.00 0.00 4.02
4480 7382 4.142182 TGCCTTCAAACTCTTTTTGTGGAG 60.142 41.667 12.31 0.00 35.86 3.86
4481 7383 4.142160 GCCTTCAAACTCTTTTTGTGGAGT 60.142 41.667 12.31 0.00 43.60 3.85
4482 7384 5.343249 CCTTCAAACTCTTTTTGTGGAGTG 58.657 41.667 0.00 0.00 41.28 3.51
4483 7385 5.125417 CCTTCAAACTCTTTTTGTGGAGTGA 59.875 40.000 0.00 0.00 41.28 3.41
4484 7386 6.350110 CCTTCAAACTCTTTTTGTGGAGTGAA 60.350 38.462 0.00 0.00 41.28 3.18
4485 7387 6.582677 TCAAACTCTTTTTGTGGAGTGAAA 57.417 33.333 0.00 0.00 41.28 2.69
4486 7388 6.386654 TCAAACTCTTTTTGTGGAGTGAAAC 58.613 36.000 0.00 0.00 41.28 2.78
4524 7426 8.447924 AGGACATGATATTCAACTTCAATGAG 57.552 34.615 0.00 0.00 0.00 2.90
4525 7427 8.270030 AGGACATGATATTCAACTTCAATGAGA 58.730 33.333 0.00 0.00 0.00 3.27
4526 7428 8.896744 GGACATGATATTCAACTTCAATGAGAA 58.103 33.333 0.00 0.00 34.41 2.87
4593 7495 9.793259 TGTCATACTATTTGAAAAAGGAAGAGT 57.207 29.630 0.00 0.00 0.00 3.24
4595 7497 9.231297 TCATACTATTTGAAAAAGGAAGAGTGG 57.769 33.333 0.00 0.00 0.00 4.00
4596 7498 9.231297 CATACTATTTGAAAAAGGAAGAGTGGA 57.769 33.333 0.00 0.00 0.00 4.02
4597 7499 9.807921 ATACTATTTGAAAAAGGAAGAGTGGAA 57.192 29.630 0.00 0.00 0.00 3.53
4598 7500 8.533569 ACTATTTGAAAAAGGAAGAGTGGAAA 57.466 30.769 0.00 0.00 0.00 3.13
4599 7501 8.414003 ACTATTTGAAAAAGGAAGAGTGGAAAC 58.586 33.333 0.00 0.00 0.00 2.78
4600 7502 6.597832 TTTGAAAAAGGAAGAGTGGAAACA 57.402 33.333 0.00 0.00 38.70 2.83
4601 7503 6.790232 TTGAAAAAGGAAGAGTGGAAACAT 57.210 33.333 0.00 0.00 46.14 2.71
4602 7504 6.790232 TGAAAAAGGAAGAGTGGAAACATT 57.210 33.333 0.00 0.00 46.14 2.71
4603 7505 6.572519 TGAAAAAGGAAGAGTGGAAACATTG 58.427 36.000 0.00 0.00 46.14 2.82
4604 7506 4.590850 AAAGGAAGAGTGGAAACATTGC 57.409 40.909 0.00 0.00 46.14 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.979693 GCAGGTGAGAGGACCTCGT 60.980 63.158 15.97 4.56 45.15 4.18
47 48 1.197492 CAAATCTAGCAGCAACACGCA 59.803 47.619 0.00 0.00 46.13 5.24
85 86 1.033574 CTACGGACTGGGATGACCTC 58.966 60.000 0.00 0.00 41.11 3.85
91 92 3.037941 CGATCCTACGGACTGGGAT 57.962 57.895 0.00 0.00 42.95 3.85
210 216 2.971598 CGTCCAGCCCATCCCACTT 61.972 63.158 0.00 0.00 0.00 3.16
283 289 3.352222 ACGGCTCGAGAACGACGT 61.352 61.111 28.63 20.12 42.90 4.34
339 345 1.142185 ATCGTTGACATCGAGCTGCG 61.142 55.000 13.54 0.00 40.57 5.18
341 347 0.299895 GCATCGTTGACATCGAGCTG 59.700 55.000 13.54 9.27 40.57 4.24
379 388 2.203640 AGGAGGTCGGTGCAGACA 60.204 61.111 8.22 0.00 42.62 3.41
446 455 2.330254 CACCACCGAAAGTGCATGT 58.670 52.632 0.00 0.00 45.83 3.21
454 463 4.073052 GGTCATGCACCACCGAAA 57.927 55.556 8.84 0.00 45.98 3.46
502 511 1.379710 CAATGAATGGCGGGGGACA 60.380 57.895 0.00 0.00 0.00 4.02
509 519 1.399440 CAGTGAGGTCAATGAATGGCG 59.601 52.381 1.11 0.00 43.86 5.69
528 538 1.822506 AGTCTTCGTCGTCATCCTCA 58.177 50.000 0.00 0.00 0.00 3.86
541 551 2.724228 CGTCGTTGTCGTCCTAGTCTTC 60.724 54.545 0.00 0.00 38.33 2.87
556 566 1.209640 GGCTTCTCTCGTCGTCGTT 59.790 57.895 1.33 0.00 38.33 3.85
610 833 9.226606 TGTAGGTGTCCATTAAACTTGAATTAG 57.773 33.333 0.00 0.00 0.00 1.73
633 955 3.373748 GCCGACACATTTCACATCATGTA 59.626 43.478 0.00 0.00 32.16 2.29
678 1000 0.251608 AACCGATTTTGTGGAGGGGG 60.252 55.000 0.00 0.00 0.00 5.40
679 1001 2.365582 CTAACCGATTTTGTGGAGGGG 58.634 52.381 0.00 0.00 0.00 4.79
680 1002 2.026636 TCCTAACCGATTTTGTGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
681 1003 3.343941 TCCTAACCGATTTTGTGGAGG 57.656 47.619 0.00 0.00 0.00 4.30
686 1008 4.379082 GCGAACAATCCTAACCGATTTTGT 60.379 41.667 0.00 0.00 29.85 2.83
726 1049 4.279922 TCTCATACAGTCCGTTTTGTCTGA 59.720 41.667 0.00 0.00 32.00 3.27
744 1070 1.754234 GCACGCCCCCAAATCTCAT 60.754 57.895 0.00 0.00 0.00 2.90
757 1083 2.804931 GCCAATTCCAACGCACGC 60.805 61.111 0.00 0.00 0.00 5.34
769 1096 3.856900 AGTGGGAAGTTTAAAGGCCAAT 58.143 40.909 5.01 0.00 0.00 3.16
788 1115 3.766545 TGCTGCCAAGGAGAATAAAAGT 58.233 40.909 0.00 0.00 0.00 2.66
996 1343 3.792736 GGGACGTAGGCCATGGCA 61.793 66.667 36.56 16.33 44.11 4.92
1047 1394 2.443781 GGGAAAGGGGTTGGGGTC 59.556 66.667 0.00 0.00 0.00 4.46
1048 1395 3.586454 CGGGAAAGGGGTTGGGGT 61.586 66.667 0.00 0.00 0.00 4.95
1067 1414 1.415126 GGGAATGGAGGGAGGATGAGA 60.415 57.143 0.00 0.00 0.00 3.27
1069 1416 0.649992 AGGGAATGGAGGGAGGATGA 59.350 55.000 0.00 0.00 0.00 2.92
1071 1418 0.955752 AGAGGGAATGGAGGGAGGAT 59.044 55.000 0.00 0.00 0.00 3.24
1547 1936 2.132996 CAAAAGCTGGGTGGTGGCA 61.133 57.895 0.00 0.00 0.00 4.92
1609 2016 0.906756 CCTTCTGTCCCTGCCTCTGA 60.907 60.000 0.00 0.00 0.00 3.27
1666 2073 2.905415 TCCAAGAAATCACTGGGCAT 57.095 45.000 0.00 0.00 31.39 4.40
1699 2106 1.440893 CCATCCTCTCCACAGCGAG 59.559 63.158 0.00 0.00 0.00 5.03
1784 2196 4.941873 GTCTAAACAACAACCAGGGGATAG 59.058 45.833 0.00 0.00 0.00 2.08
1811 2223 0.729140 GGCCGCAAAGTCAATTCACG 60.729 55.000 0.00 0.00 0.00 4.35
1892 2304 2.673326 GCTTCCCATCTTCTTGCAAAGC 60.673 50.000 0.00 0.00 45.70 3.51
1895 2307 2.559668 CAAGCTTCCCATCTTCTTGCAA 59.440 45.455 0.00 0.00 0.00 4.08
1922 2334 1.613437 GCATGGTAAGCACACCTTGTT 59.387 47.619 18.10 0.00 42.76 2.83
1963 2380 2.544267 GTGACCCTGAGTTCTGAAAACG 59.456 50.000 0.00 0.00 0.00 3.60
2092 2511 0.698818 GGGGTTCTGGATTGTCAGGT 59.301 55.000 0.00 0.00 35.58 4.00
2103 2522 4.351874 TCTTTACTGTCTTGGGGTTCTG 57.648 45.455 0.00 0.00 0.00 3.02
2144 2563 6.709397 AGCATCATACATCGTCTCAATGAATT 59.291 34.615 0.00 0.00 30.90 2.17
2206 2626 9.447157 CATCTTAATTGCCCAAAAATTCCTTTA 57.553 29.630 0.00 0.00 0.00 1.85
2327 2748 1.766496 AGAGAAACAAGGAACCACCGA 59.234 47.619 0.00 0.00 44.74 4.69
2458 2879 7.542025 AGCAAACATAGCTTCTTTTCCATAAG 58.458 34.615 0.00 0.00 39.87 1.73
2472 2893 9.928236 TTTAAAACAATTTCAAGCAAACATAGC 57.072 25.926 0.00 0.00 0.00 2.97
2513 2934 2.028112 AGCTACAGAAAACATCAGCCGA 60.028 45.455 0.00 0.00 0.00 5.54
2514 2935 2.349886 GAGCTACAGAAAACATCAGCCG 59.650 50.000 0.00 0.00 0.00 5.52
2701 3150 9.125906 GTAGTGGCTTGTATAATGAATAGTACG 57.874 37.037 0.00 0.00 0.00 3.67
2922 3381 5.774184 AGATGAGTCTGCAGAAGATATGCTA 59.226 40.000 20.19 0.00 44.17 3.49
3056 5153 5.391736 GCTGAACCTCTCATCAATCAACTTG 60.392 44.000 0.00 0.00 32.14 3.16
3131 5228 6.998802 ACCAGTATGCCTTAGATACATCTTC 58.001 40.000 0.00 0.00 34.61 2.87
3155 5252 1.072505 GCTCCCTTGGACAAACCGA 59.927 57.895 0.00 0.00 42.61 4.69
3180 5277 5.013599 AGCTAACTTCATTGGAAACCTCTCT 59.986 40.000 0.00 0.00 31.35 3.10
3233 5330 8.533569 TCACAGATTATCATGTACTAACCTGA 57.466 34.615 11.36 0.00 35.16 3.86
3279 5437 7.695480 ATGCAGGTACATTACAAATGTAACA 57.305 32.000 22.96 14.83 42.88 2.41
3354 5951 1.070577 GGCTATTACTTGTGCGCATCG 60.071 52.381 15.91 7.76 0.00 3.84
3365 5962 8.130671 TGTCAGTACTAAAACAGGCTATTACT 57.869 34.615 0.00 0.00 0.00 2.24
3366 5963 8.943909 ATGTCAGTACTAAAACAGGCTATTAC 57.056 34.615 0.00 0.00 0.00 1.89
3372 5969 6.346096 TCCATATGTCAGTACTAAAACAGGC 58.654 40.000 1.24 0.00 0.00 4.85
3489 6086 8.859090 TGTTCAATCCAGTCAATTAGAAAACAT 58.141 29.630 0.00 0.00 0.00 2.71
3612 6252 5.299279 CCTATTGTACTTGCCCTTGGTTATG 59.701 44.000 0.00 0.00 0.00 1.90
3733 6410 9.698309 ATTCGATAGTTCATCATTATTTCGTCT 57.302 29.630 0.00 0.00 32.71 4.18
3743 6420 8.993121 GTTGTGGATAATTCGATAGTTCATCAT 58.007 33.333 0.00 0.00 32.71 2.45
3744 6421 7.169140 CGTTGTGGATAATTCGATAGTTCATCA 59.831 37.037 0.00 0.00 32.71 3.07
3747 6424 5.751509 CCGTTGTGGATAATTCGATAGTTCA 59.248 40.000 0.00 0.00 42.00 3.18
3823 6505 4.327898 GCATGTAGGATTTTCAACGACGTA 59.672 41.667 0.00 0.00 0.00 3.57
3842 6524 2.821378 TGTTCCTTGAGTTCCATGCATG 59.179 45.455 20.19 20.19 0.00 4.06
3843 6525 3.159213 TGTTCCTTGAGTTCCATGCAT 57.841 42.857 0.00 0.00 0.00 3.96
3844 6526 2.655090 TGTTCCTTGAGTTCCATGCA 57.345 45.000 0.00 0.00 0.00 3.96
3845 6527 4.458989 TGTATTGTTCCTTGAGTTCCATGC 59.541 41.667 0.00 0.00 0.00 4.06
3885 6787 3.012518 GTGTCATATTGCAGGCTCTGTT 58.987 45.455 4.45 0.00 33.43 3.16
3891 6793 6.382869 AATTTAGAGTGTCATATTGCAGGC 57.617 37.500 0.00 0.00 0.00 4.85
3961 6863 4.264253 ACAATGCTCTGCAAATAGTAGCA 58.736 39.130 0.00 0.00 46.30 3.49
4011 6913 7.064134 CAGCAAATTTTTATGTGCACTGATCAT 59.936 33.333 19.41 5.14 39.50 2.45
4089 6991 4.924305 ATGCACCAGCGATAAATTCAAT 57.076 36.364 0.00 0.00 46.23 2.57
4098 7000 1.962822 CGGCATATGCACCAGCGAT 60.963 57.895 28.07 0.00 46.23 4.58
4115 7017 5.062058 GTCCCAAAATTTCAACATGTATGCG 59.938 40.000 0.00 0.00 0.00 4.73
4163 7065 3.897505 TGGCTAGAGCATGCACTTCTATA 59.102 43.478 22.83 3.70 44.36 1.31
4164 7066 2.702478 TGGCTAGAGCATGCACTTCTAT 59.298 45.455 22.83 0.00 44.36 1.98
4165 7067 2.110578 TGGCTAGAGCATGCACTTCTA 58.889 47.619 22.83 17.21 44.36 2.10
4166 7068 0.907486 TGGCTAGAGCATGCACTTCT 59.093 50.000 22.83 17.00 44.36 2.85
4167 7069 1.742761 TTGGCTAGAGCATGCACTTC 58.257 50.000 22.83 14.30 44.36 3.01
4168 7070 2.022195 CATTGGCTAGAGCATGCACTT 58.978 47.619 22.83 8.33 44.36 3.16
4169 7071 1.676746 CATTGGCTAGAGCATGCACT 58.323 50.000 21.45 21.45 44.36 4.40
4170 7072 0.030369 GCATTGGCTAGAGCATGCAC 59.970 55.000 21.98 14.59 44.74 4.57
4171 7073 2.411535 GCATTGGCTAGAGCATGCA 58.588 52.632 21.98 0.00 44.74 3.96
4172 7074 0.742505 TTGCATTGGCTAGAGCATGC 59.257 50.000 10.51 10.51 45.25 4.06
4173 7075 3.728076 ATTTGCATTGGCTAGAGCATG 57.272 42.857 3.54 0.90 44.36 4.06
4174 7076 5.857471 TTTATTTGCATTGGCTAGAGCAT 57.143 34.783 3.54 0.00 44.36 3.79
4175 7077 5.418524 TCTTTTATTTGCATTGGCTAGAGCA 59.581 36.000 3.54 0.00 44.36 4.26
4176 7078 5.745769 GTCTTTTATTTGCATTGGCTAGAGC 59.254 40.000 0.00 0.00 41.91 4.09
4177 7079 6.268566 GGTCTTTTATTTGCATTGGCTAGAG 58.731 40.000 0.00 0.00 41.91 2.43
4178 7080 5.163663 CGGTCTTTTATTTGCATTGGCTAGA 60.164 40.000 0.00 0.00 41.91 2.43
4179 7081 5.036737 CGGTCTTTTATTTGCATTGGCTAG 58.963 41.667 0.00 0.00 41.91 3.42
4180 7082 4.702612 TCGGTCTTTTATTTGCATTGGCTA 59.297 37.500 0.00 0.00 41.91 3.93
4181 7083 3.509575 TCGGTCTTTTATTTGCATTGGCT 59.490 39.130 0.00 0.00 41.91 4.75
4182 7084 3.843999 TCGGTCTTTTATTTGCATTGGC 58.156 40.909 0.00 0.00 41.68 4.52
4183 7085 5.745294 CAGATCGGTCTTTTATTTGCATTGG 59.255 40.000 0.00 0.00 30.42 3.16
4184 7086 6.554419 TCAGATCGGTCTTTTATTTGCATTG 58.446 36.000 0.00 0.00 30.42 2.82
4185 7087 6.757897 TCAGATCGGTCTTTTATTTGCATT 57.242 33.333 0.00 0.00 30.42 3.56
4186 7088 6.949352 ATCAGATCGGTCTTTTATTTGCAT 57.051 33.333 0.00 0.00 30.42 3.96
4187 7089 7.272244 TCTATCAGATCGGTCTTTTATTTGCA 58.728 34.615 0.00 0.00 30.42 4.08
4188 7090 7.715265 TCTATCAGATCGGTCTTTTATTTGC 57.285 36.000 0.00 0.00 30.42 3.68
4189 7091 9.534565 TCTTCTATCAGATCGGTCTTTTATTTG 57.465 33.333 0.00 0.00 30.42 2.32
4190 7092 9.757227 CTCTTCTATCAGATCGGTCTTTTATTT 57.243 33.333 0.00 0.00 30.42 1.40
4191 7093 9.137459 TCTCTTCTATCAGATCGGTCTTTTATT 57.863 33.333 0.00 0.00 30.42 1.40
4192 7094 8.573035 GTCTCTTCTATCAGATCGGTCTTTTAT 58.427 37.037 0.00 0.00 30.42 1.40
4193 7095 7.776030 AGTCTCTTCTATCAGATCGGTCTTTTA 59.224 37.037 0.00 0.00 30.42 1.52
4194 7096 6.605594 AGTCTCTTCTATCAGATCGGTCTTTT 59.394 38.462 0.00 0.00 30.42 2.27
4195 7097 6.126409 AGTCTCTTCTATCAGATCGGTCTTT 58.874 40.000 0.00 0.00 30.42 2.52
4196 7098 5.690865 AGTCTCTTCTATCAGATCGGTCTT 58.309 41.667 0.00 0.00 30.42 3.01
4197 7099 5.304686 AGTCTCTTCTATCAGATCGGTCT 57.695 43.478 0.00 0.00 34.14 3.85
4198 7100 5.642063 CCTAGTCTCTTCTATCAGATCGGTC 59.358 48.000 0.00 0.00 0.00 4.79
4199 7101 5.308497 TCCTAGTCTCTTCTATCAGATCGGT 59.692 44.000 0.00 0.00 0.00 4.69
4200 7102 5.800296 TCCTAGTCTCTTCTATCAGATCGG 58.200 45.833 0.00 0.00 0.00 4.18
4201 7103 6.128282 GCTTCCTAGTCTCTTCTATCAGATCG 60.128 46.154 0.00 0.00 0.00 3.69
4202 7104 6.714810 TGCTTCCTAGTCTCTTCTATCAGATC 59.285 42.308 0.00 0.00 0.00 2.75
4203 7105 6.490040 GTGCTTCCTAGTCTCTTCTATCAGAT 59.510 42.308 0.00 0.00 0.00 2.90
4204 7106 5.825679 GTGCTTCCTAGTCTCTTCTATCAGA 59.174 44.000 0.00 0.00 0.00 3.27
4205 7107 5.592282 TGTGCTTCCTAGTCTCTTCTATCAG 59.408 44.000 0.00 0.00 0.00 2.90
4206 7108 5.510430 TGTGCTTCCTAGTCTCTTCTATCA 58.490 41.667 0.00 0.00 0.00 2.15
4207 7109 6.648879 ATGTGCTTCCTAGTCTCTTCTATC 57.351 41.667 0.00 0.00 0.00 2.08
4208 7110 8.719645 ATAATGTGCTTCCTAGTCTCTTCTAT 57.280 34.615 0.00 0.00 0.00 1.98
4209 7111 9.069082 GTATAATGTGCTTCCTAGTCTCTTCTA 57.931 37.037 0.00 0.00 0.00 2.10
4210 7112 7.255312 CGTATAATGTGCTTCCTAGTCTCTTCT 60.255 40.741 0.00 0.00 0.00 2.85
4211 7113 6.858993 CGTATAATGTGCTTCCTAGTCTCTTC 59.141 42.308 0.00 0.00 0.00 2.87
4212 7114 6.321690 ACGTATAATGTGCTTCCTAGTCTCTT 59.678 38.462 0.00 0.00 0.00 2.85
4213 7115 5.828859 ACGTATAATGTGCTTCCTAGTCTCT 59.171 40.000 0.00 0.00 0.00 3.10
4214 7116 6.074544 ACGTATAATGTGCTTCCTAGTCTC 57.925 41.667 0.00 0.00 0.00 3.36
4215 7117 5.593095 TGACGTATAATGTGCTTCCTAGTCT 59.407 40.000 0.00 0.00 0.00 3.24
4216 7118 5.828747 TGACGTATAATGTGCTTCCTAGTC 58.171 41.667 0.00 0.00 0.00 2.59
4217 7119 5.847111 TGACGTATAATGTGCTTCCTAGT 57.153 39.130 0.00 0.00 0.00 2.57
4218 7120 6.019801 GTGTTGACGTATAATGTGCTTCCTAG 60.020 42.308 0.00 0.00 0.00 3.02
4219 7121 5.808540 GTGTTGACGTATAATGTGCTTCCTA 59.191 40.000 0.00 0.00 0.00 2.94
4220 7122 4.630069 GTGTTGACGTATAATGTGCTTCCT 59.370 41.667 0.00 0.00 0.00 3.36
4221 7123 4.630069 AGTGTTGACGTATAATGTGCTTCC 59.370 41.667 0.00 0.00 0.00 3.46
4222 7124 5.779806 AGTGTTGACGTATAATGTGCTTC 57.220 39.130 0.00 0.00 0.00 3.86
4223 7125 6.395629 AGTAGTGTTGACGTATAATGTGCTT 58.604 36.000 0.00 0.00 0.00 3.91
4224 7126 5.962433 AGTAGTGTTGACGTATAATGTGCT 58.038 37.500 0.00 0.00 0.00 4.40
4225 7127 6.074994 GCTAGTAGTGTTGACGTATAATGTGC 60.075 42.308 0.00 0.00 0.00 4.57
4226 7128 7.194278 AGCTAGTAGTGTTGACGTATAATGTG 58.806 38.462 0.00 0.00 0.00 3.21
4227 7129 7.330900 AGCTAGTAGTGTTGACGTATAATGT 57.669 36.000 0.00 0.00 0.00 2.71
4228 7130 9.167239 GTTAGCTAGTAGTGTTGACGTATAATG 57.833 37.037 0.00 0.00 0.00 1.90
4229 7131 8.896744 TGTTAGCTAGTAGTGTTGACGTATAAT 58.103 33.333 0.00 0.00 0.00 1.28
4230 7132 8.267620 TGTTAGCTAGTAGTGTTGACGTATAA 57.732 34.615 0.00 0.00 0.00 0.98
4231 7133 7.848223 TGTTAGCTAGTAGTGTTGACGTATA 57.152 36.000 0.00 0.00 0.00 1.47
4232 7134 6.748333 TGTTAGCTAGTAGTGTTGACGTAT 57.252 37.500 0.00 0.00 0.00 3.06
4233 7135 6.558771 TTGTTAGCTAGTAGTGTTGACGTA 57.441 37.500 0.00 0.00 0.00 3.57
4234 7136 5.443185 TTGTTAGCTAGTAGTGTTGACGT 57.557 39.130 0.00 0.00 0.00 4.34
4235 7137 7.249147 ACTATTGTTAGCTAGTAGTGTTGACG 58.751 38.462 0.00 0.00 0.00 4.35
4236 7138 8.983307 AACTATTGTTAGCTAGTAGTGTTGAC 57.017 34.615 0.00 0.00 34.15 3.18
4237 7139 9.991906 AAAACTATTGTTAGCTAGTAGTGTTGA 57.008 29.630 10.08 0.00 34.96 3.18
4254 7156 9.974750 GGAGACGAAAGATTAAGAAAACTATTG 57.025 33.333 0.00 0.00 0.00 1.90
4255 7157 9.720769 TGGAGACGAAAGATTAAGAAAACTATT 57.279 29.630 0.00 0.00 0.00 1.73
4256 7158 9.892130 ATGGAGACGAAAGATTAAGAAAACTAT 57.108 29.630 0.00 0.00 0.00 2.12
4257 7159 9.720769 AATGGAGACGAAAGATTAAGAAAACTA 57.279 29.630 0.00 0.00 0.00 2.24
4258 7160 8.507249 CAATGGAGACGAAAGATTAAGAAAACT 58.493 33.333 0.00 0.00 0.00 2.66
4259 7161 8.290325 ACAATGGAGACGAAAGATTAAGAAAAC 58.710 33.333 0.00 0.00 0.00 2.43
4260 7162 8.391075 ACAATGGAGACGAAAGATTAAGAAAA 57.609 30.769 0.00 0.00 0.00 2.29
4261 7163 7.979444 ACAATGGAGACGAAAGATTAAGAAA 57.021 32.000 0.00 0.00 0.00 2.52
4262 7164 7.979444 AACAATGGAGACGAAAGATTAAGAA 57.021 32.000 0.00 0.00 0.00 2.52
4263 7165 8.311836 AGTAACAATGGAGACGAAAGATTAAGA 58.688 33.333 0.00 0.00 0.00 2.10
4264 7166 8.480643 AGTAACAATGGAGACGAAAGATTAAG 57.519 34.615 0.00 0.00 0.00 1.85
4265 7167 8.842358 AAGTAACAATGGAGACGAAAGATTAA 57.158 30.769 0.00 0.00 0.00 1.40
4266 7168 8.311836 AGAAGTAACAATGGAGACGAAAGATTA 58.688 33.333 0.00 0.00 0.00 1.75
4267 7169 7.162082 AGAAGTAACAATGGAGACGAAAGATT 58.838 34.615 0.00 0.00 0.00 2.40
4268 7170 6.702329 AGAAGTAACAATGGAGACGAAAGAT 58.298 36.000 0.00 0.00 0.00 2.40
4269 7171 6.097915 AGAAGTAACAATGGAGACGAAAGA 57.902 37.500 0.00 0.00 0.00 2.52
4270 7172 5.061064 CGAGAAGTAACAATGGAGACGAAAG 59.939 44.000 0.00 0.00 0.00 2.62
4271 7173 4.921515 CGAGAAGTAACAATGGAGACGAAA 59.078 41.667 0.00 0.00 0.00 3.46
4272 7174 4.022589 ACGAGAAGTAACAATGGAGACGAA 60.023 41.667 0.00 0.00 0.00 3.85
4273 7175 3.504906 ACGAGAAGTAACAATGGAGACGA 59.495 43.478 0.00 0.00 0.00 4.20
4274 7176 3.608506 CACGAGAAGTAACAATGGAGACG 59.391 47.826 0.00 0.00 0.00 4.18
4275 7177 3.368236 GCACGAGAAGTAACAATGGAGAC 59.632 47.826 0.00 0.00 0.00 3.36
4276 7178 3.006430 TGCACGAGAAGTAACAATGGAGA 59.994 43.478 0.00 0.00 0.00 3.71
4277 7179 3.325870 TGCACGAGAAGTAACAATGGAG 58.674 45.455 0.00 0.00 0.00 3.86
4278 7180 3.006430 TCTGCACGAGAAGTAACAATGGA 59.994 43.478 0.00 0.00 0.00 3.41
4279 7181 3.325870 TCTGCACGAGAAGTAACAATGG 58.674 45.455 0.00 0.00 0.00 3.16
4280 7182 5.120674 TCAATCTGCACGAGAAGTAACAATG 59.879 40.000 0.00 0.00 33.12 2.82
4281 7183 5.237815 TCAATCTGCACGAGAAGTAACAAT 58.762 37.500 0.00 0.00 33.12 2.71
4282 7184 4.627058 TCAATCTGCACGAGAAGTAACAA 58.373 39.130 0.00 0.00 33.12 2.83
4283 7185 4.251543 TCAATCTGCACGAGAAGTAACA 57.748 40.909 0.00 0.00 33.12 2.41
4284 7186 5.786401 ATTCAATCTGCACGAGAAGTAAC 57.214 39.130 0.00 0.00 33.12 2.50
4285 7187 5.931724 TCAATTCAATCTGCACGAGAAGTAA 59.068 36.000 0.00 0.00 33.12 2.24
4286 7188 5.478407 TCAATTCAATCTGCACGAGAAGTA 58.522 37.500 0.00 0.00 33.12 2.24
4287 7189 4.318332 TCAATTCAATCTGCACGAGAAGT 58.682 39.130 0.00 0.00 33.12 3.01
4288 7190 4.934075 TCAATTCAATCTGCACGAGAAG 57.066 40.909 0.00 0.00 33.12 2.85
4289 7191 4.083324 GGTTCAATTCAATCTGCACGAGAA 60.083 41.667 0.00 0.00 33.12 2.87
4290 7192 3.436704 GGTTCAATTCAATCTGCACGAGA 59.563 43.478 0.00 0.00 34.25 4.04
4291 7193 3.189080 TGGTTCAATTCAATCTGCACGAG 59.811 43.478 0.00 0.00 0.00 4.18
4292 7194 3.145286 TGGTTCAATTCAATCTGCACGA 58.855 40.909 0.00 0.00 0.00 4.35
4293 7195 3.189080 TCTGGTTCAATTCAATCTGCACG 59.811 43.478 0.00 0.00 0.00 5.34
4294 7196 4.771590 TCTGGTTCAATTCAATCTGCAC 57.228 40.909 0.00 0.00 0.00 4.57
4295 7197 5.531634 GTTTCTGGTTCAATTCAATCTGCA 58.468 37.500 0.00 0.00 0.00 4.41
4296 7198 4.618489 CGTTTCTGGTTCAATTCAATCTGC 59.382 41.667 0.00 0.00 0.00 4.26
4297 7199 5.853282 GTCGTTTCTGGTTCAATTCAATCTG 59.147 40.000 0.00 0.00 0.00 2.90
4298 7200 5.048713 GGTCGTTTCTGGTTCAATTCAATCT 60.049 40.000 0.00 0.00 0.00 2.40
4299 7201 5.154222 GGTCGTTTCTGGTTCAATTCAATC 58.846 41.667 0.00 0.00 0.00 2.67
4300 7202 4.022329 GGGTCGTTTCTGGTTCAATTCAAT 60.022 41.667 0.00 0.00 0.00 2.57
4301 7203 3.316868 GGGTCGTTTCTGGTTCAATTCAA 59.683 43.478 0.00 0.00 0.00 2.69
4302 7204 2.882137 GGGTCGTTTCTGGTTCAATTCA 59.118 45.455 0.00 0.00 0.00 2.57
4303 7205 3.146847 AGGGTCGTTTCTGGTTCAATTC 58.853 45.455 0.00 0.00 0.00 2.17
4304 7206 3.223674 AGGGTCGTTTCTGGTTCAATT 57.776 42.857 0.00 0.00 0.00 2.32
4305 7207 2.951229 AGGGTCGTTTCTGGTTCAAT 57.049 45.000 0.00 0.00 0.00 2.57
4306 7208 2.721425 AAGGGTCGTTTCTGGTTCAA 57.279 45.000 0.00 0.00 0.00 2.69
4307 7209 4.069304 CAATAAGGGTCGTTTCTGGTTCA 58.931 43.478 0.00 0.00 0.00 3.18
4308 7210 3.439129 CCAATAAGGGTCGTTTCTGGTTC 59.561 47.826 0.00 0.00 0.00 3.62
4309 7211 3.073356 TCCAATAAGGGTCGTTTCTGGTT 59.927 43.478 0.00 0.00 38.24 3.67
4310 7212 2.640826 TCCAATAAGGGTCGTTTCTGGT 59.359 45.455 0.00 0.00 38.24 4.00
4311 7213 3.343941 TCCAATAAGGGTCGTTTCTGG 57.656 47.619 0.00 0.00 38.24 3.86
4312 7214 4.392138 GTCTTCCAATAAGGGTCGTTTCTG 59.608 45.833 0.00 0.00 38.24 3.02
4313 7215 4.576879 GTCTTCCAATAAGGGTCGTTTCT 58.423 43.478 0.00 0.00 38.24 2.52
4314 7216 3.370061 CGTCTTCCAATAAGGGTCGTTTC 59.630 47.826 0.00 0.00 38.24 2.78
4315 7217 3.244318 ACGTCTTCCAATAAGGGTCGTTT 60.244 43.478 0.00 0.00 38.24 3.60
4316 7218 2.301009 ACGTCTTCCAATAAGGGTCGTT 59.699 45.455 0.00 0.00 38.24 3.85
4317 7219 1.897802 ACGTCTTCCAATAAGGGTCGT 59.102 47.619 0.00 0.00 38.24 4.34
4318 7220 2.667473 ACGTCTTCCAATAAGGGTCG 57.333 50.000 0.00 0.00 38.24 4.79
4319 7221 4.344390 AGGATACGTCTTCCAATAAGGGTC 59.656 45.833 17.14 0.00 46.39 4.46
4320 7222 4.101119 CAGGATACGTCTTCCAATAAGGGT 59.899 45.833 17.14 0.00 46.39 4.34
4321 7223 4.632153 CAGGATACGTCTTCCAATAAGGG 58.368 47.826 17.14 0.00 46.39 3.95
4322 7224 4.058817 GCAGGATACGTCTTCCAATAAGG 58.941 47.826 17.14 3.74 46.39 2.69
4323 7225 4.058817 GGCAGGATACGTCTTCCAATAAG 58.941 47.826 17.14 5.38 46.39 1.73
4324 7226 3.709653 AGGCAGGATACGTCTTCCAATAA 59.290 43.478 17.14 0.00 46.39 1.40
4325 7227 3.069586 CAGGCAGGATACGTCTTCCAATA 59.930 47.826 17.14 0.00 46.39 1.90
4326 7228 2.119495 AGGCAGGATACGTCTTCCAAT 58.881 47.619 17.14 0.00 46.39 3.16
4327 7229 1.207089 CAGGCAGGATACGTCTTCCAA 59.793 52.381 17.14 0.00 46.39 3.53
4328 7230 0.824109 CAGGCAGGATACGTCTTCCA 59.176 55.000 17.14 0.00 46.39 3.53
4329 7231 0.824759 ACAGGCAGGATACGTCTTCC 59.175 55.000 8.99 8.99 46.39 3.46
4330 7232 1.534175 CGACAGGCAGGATACGTCTTC 60.534 57.143 0.00 0.00 46.39 2.87
4331 7233 0.456221 CGACAGGCAGGATACGTCTT 59.544 55.000 0.00 0.00 46.39 3.01
4332 7234 0.393944 TCGACAGGCAGGATACGTCT 60.394 55.000 0.00 0.00 46.39 4.18
4333 7235 0.454600 TTCGACAGGCAGGATACGTC 59.545 55.000 0.00 0.00 46.39 4.34
4334 7236 0.892755 TTTCGACAGGCAGGATACGT 59.107 50.000 0.00 0.00 46.39 3.57
4335 7237 1.134367 TCTTTCGACAGGCAGGATACG 59.866 52.381 0.00 0.00 46.39 3.06
4336 7238 2.961526 TCTTTCGACAGGCAGGATAC 57.038 50.000 0.00 0.00 0.00 2.24
4337 7239 3.300388 AGATCTTTCGACAGGCAGGATA 58.700 45.455 0.00 0.00 0.00 2.59
4338 7240 2.114616 AGATCTTTCGACAGGCAGGAT 58.885 47.619 0.00 0.00 0.00 3.24
4339 7241 1.561643 AGATCTTTCGACAGGCAGGA 58.438 50.000 0.00 0.00 0.00 3.86
4340 7242 2.005451 CAAGATCTTTCGACAGGCAGG 58.995 52.381 4.86 0.00 0.00 4.85
4341 7243 2.964740 TCAAGATCTTTCGACAGGCAG 58.035 47.619 4.86 0.00 0.00 4.85
4342 7244 3.616956 ATCAAGATCTTTCGACAGGCA 57.383 42.857 4.86 0.00 0.00 4.75
4343 7245 4.954092 AAATCAAGATCTTTCGACAGGC 57.046 40.909 4.86 0.00 0.00 4.85
4344 7246 6.457528 GCCTTAAATCAAGATCTTTCGACAGG 60.458 42.308 4.86 8.37 36.22 4.00
4345 7247 6.314896 AGCCTTAAATCAAGATCTTTCGACAG 59.685 38.462 4.86 0.00 36.22 3.51
4346 7248 6.092670 CAGCCTTAAATCAAGATCTTTCGACA 59.907 38.462 4.86 0.00 36.22 4.35
4347 7249 6.313905 TCAGCCTTAAATCAAGATCTTTCGAC 59.686 38.462 4.86 0.00 36.22 4.20
4348 7250 6.406370 TCAGCCTTAAATCAAGATCTTTCGA 58.594 36.000 4.86 1.19 36.22 3.71
4349 7251 6.668541 TCAGCCTTAAATCAAGATCTTTCG 57.331 37.500 4.86 0.00 36.22 3.46
4350 7252 7.994194 ACATCAGCCTTAAATCAAGATCTTTC 58.006 34.615 4.86 0.00 36.22 2.62
4351 7253 7.951347 ACATCAGCCTTAAATCAAGATCTTT 57.049 32.000 4.86 0.00 36.22 2.52
4352 7254 7.613022 TCAACATCAGCCTTAAATCAAGATCTT 59.387 33.333 0.88 0.88 36.22 2.40
4353 7255 7.114754 TCAACATCAGCCTTAAATCAAGATCT 58.885 34.615 0.00 0.00 36.22 2.75
4354 7256 7.325660 TCAACATCAGCCTTAAATCAAGATC 57.674 36.000 0.00 0.00 36.22 2.75
4355 7257 7.707624 TTCAACATCAGCCTTAAATCAAGAT 57.292 32.000 0.00 0.00 36.22 2.40
4356 7258 7.707624 ATTCAACATCAGCCTTAAATCAAGA 57.292 32.000 0.00 0.00 36.22 3.02
4357 7259 7.641411 CGTATTCAACATCAGCCTTAAATCAAG 59.359 37.037 0.00 0.00 0.00 3.02
4358 7260 7.335673 TCGTATTCAACATCAGCCTTAAATCAA 59.664 33.333 0.00 0.00 0.00 2.57
4359 7261 6.821160 TCGTATTCAACATCAGCCTTAAATCA 59.179 34.615 0.00 0.00 0.00 2.57
4360 7262 7.246674 TCGTATTCAACATCAGCCTTAAATC 57.753 36.000 0.00 0.00 0.00 2.17
4361 7263 7.624360 TTCGTATTCAACATCAGCCTTAAAT 57.376 32.000 0.00 0.00 0.00 1.40
4362 7264 7.624360 ATTCGTATTCAACATCAGCCTTAAA 57.376 32.000 0.00 0.00 0.00 1.52
4363 7265 7.441157 CCTATTCGTATTCAACATCAGCCTTAA 59.559 37.037 0.00 0.00 0.00 1.85
4364 7266 6.929049 CCTATTCGTATTCAACATCAGCCTTA 59.071 38.462 0.00 0.00 0.00 2.69
4365 7267 5.760253 CCTATTCGTATTCAACATCAGCCTT 59.240 40.000 0.00 0.00 0.00 4.35
4366 7268 5.070446 TCCTATTCGTATTCAACATCAGCCT 59.930 40.000 0.00 0.00 0.00 4.58
4367 7269 5.297547 TCCTATTCGTATTCAACATCAGCC 58.702 41.667 0.00 0.00 0.00 4.85
4368 7270 6.091441 GGATCCTATTCGTATTCAACATCAGC 59.909 42.308 3.84 0.00 0.00 4.26
4369 7271 7.382110 AGGATCCTATTCGTATTCAACATCAG 58.618 38.462 14.27 0.00 0.00 2.90
4370 7272 7.303182 AGGATCCTATTCGTATTCAACATCA 57.697 36.000 14.27 0.00 0.00 3.07
4371 7273 9.877178 ATTAGGATCCTATTCGTATTCAACATC 57.123 33.333 22.30 0.00 0.00 3.06
4376 7278 9.749340 TGTCTATTAGGATCCTATTCGTATTCA 57.251 33.333 22.30 11.06 0.00 2.57
4379 7281 9.922477 TCATGTCTATTAGGATCCTATTCGTAT 57.078 33.333 22.30 14.19 0.00 3.06
4380 7282 9.397280 CTCATGTCTATTAGGATCCTATTCGTA 57.603 37.037 22.30 7.44 0.00 3.43
4381 7283 7.891183 ACTCATGTCTATTAGGATCCTATTCGT 59.109 37.037 22.30 11.14 0.00 3.85
4382 7284 8.287439 ACTCATGTCTATTAGGATCCTATTCG 57.713 38.462 22.30 14.29 0.00 3.34
4384 7286 9.607333 TGAACTCATGTCTATTAGGATCCTATT 57.393 33.333 22.30 19.84 0.00 1.73
4385 7287 9.781425 ATGAACTCATGTCTATTAGGATCCTAT 57.219 33.333 22.30 14.12 34.83 2.57
4387 7289 9.781425 ATATGAACTCATGTCTATTAGGATCCT 57.219 33.333 20.48 20.48 37.15 3.24
4391 7293 8.597167 CCCAATATGAACTCATGTCTATTAGGA 58.403 37.037 2.36 0.00 37.15 2.94
4392 7294 8.597167 TCCCAATATGAACTCATGTCTATTAGG 58.403 37.037 2.36 0.00 37.15 2.69
4395 7297 9.872684 AATTCCCAATATGAACTCATGTCTATT 57.127 29.630 2.36 0.00 37.15 1.73
4398 7300 9.872684 ATTAATTCCCAATATGAACTCATGTCT 57.127 29.630 2.36 0.00 37.15 3.41
4399 7301 9.903682 CATTAATTCCCAATATGAACTCATGTC 57.096 33.333 2.36 0.00 37.15 3.06
4400 7302 8.362639 GCATTAATTCCCAATATGAACTCATGT 58.637 33.333 2.36 0.00 37.15 3.21
4401 7303 8.582437 AGCATTAATTCCCAATATGAACTCATG 58.418 33.333 2.36 0.00 37.15 3.07
4402 7304 8.716674 AGCATTAATTCCCAATATGAACTCAT 57.283 30.769 0.00 0.00 40.22 2.90
4403 7305 9.639563 TTAGCATTAATTCCCAATATGAACTCA 57.360 29.630 0.00 0.00 0.00 3.41
4424 7326 8.859090 CCAATCCAAGGTATATCAAATTTAGCA 58.141 33.333 0.00 0.00 0.00 3.49
4425 7327 9.077885 TCCAATCCAAGGTATATCAAATTTAGC 57.922 33.333 0.00 0.00 0.00 3.09
4427 7329 9.928618 TGTCCAATCCAAGGTATATCAAATTTA 57.071 29.630 0.00 0.00 0.00 1.40
4428 7330 8.837099 TGTCCAATCCAAGGTATATCAAATTT 57.163 30.769 0.00 0.00 0.00 1.82
4429 7331 9.438163 AATGTCCAATCCAAGGTATATCAAATT 57.562 29.630 0.00 0.00 0.00 1.82
4432 7334 9.519191 CATAATGTCCAATCCAAGGTATATCAA 57.481 33.333 0.00 0.00 0.00 2.57
4433 7335 7.611467 GCATAATGTCCAATCCAAGGTATATCA 59.389 37.037 0.00 0.00 0.00 2.15
4434 7336 7.067494 GGCATAATGTCCAATCCAAGGTATATC 59.933 40.741 0.00 0.00 0.00 1.63
4435 7337 6.891908 GGCATAATGTCCAATCCAAGGTATAT 59.108 38.462 0.00 0.00 0.00 0.86
4436 7338 6.045459 AGGCATAATGTCCAATCCAAGGTATA 59.955 38.462 0.00 0.00 0.00 1.47
4437 7339 5.079643 GGCATAATGTCCAATCCAAGGTAT 58.920 41.667 0.00 0.00 0.00 2.73
4438 7340 4.167892 AGGCATAATGTCCAATCCAAGGTA 59.832 41.667 0.00 0.00 0.00 3.08
4439 7341 3.052642 AGGCATAATGTCCAATCCAAGGT 60.053 43.478 0.00 0.00 0.00 3.50
4440 7342 3.569491 AGGCATAATGTCCAATCCAAGG 58.431 45.455 0.00 0.00 0.00 3.61
4441 7343 4.646040 TGAAGGCATAATGTCCAATCCAAG 59.354 41.667 0.00 0.00 0.00 3.61
4442 7344 4.608269 TGAAGGCATAATGTCCAATCCAA 58.392 39.130 0.00 0.00 0.00 3.53
4443 7345 4.248174 TGAAGGCATAATGTCCAATCCA 57.752 40.909 0.00 0.00 0.00 3.41
4444 7346 5.127682 AGTTTGAAGGCATAATGTCCAATCC 59.872 40.000 0.00 0.00 0.00 3.01
4445 7347 6.096001 AGAGTTTGAAGGCATAATGTCCAATC 59.904 38.462 0.00 0.00 0.00 2.67
4446 7348 5.954150 AGAGTTTGAAGGCATAATGTCCAAT 59.046 36.000 0.00 0.00 0.00 3.16
4447 7349 5.324409 AGAGTTTGAAGGCATAATGTCCAA 58.676 37.500 0.00 0.00 0.00 3.53
4448 7350 4.922206 AGAGTTTGAAGGCATAATGTCCA 58.078 39.130 0.00 0.00 0.00 4.02
4449 7351 5.904362 AAGAGTTTGAAGGCATAATGTCC 57.096 39.130 0.00 0.00 0.00 4.02
4450 7352 7.653311 ACAAAAAGAGTTTGAAGGCATAATGTC 59.347 33.333 5.85 0.00 33.83 3.06
4451 7353 7.439056 CACAAAAAGAGTTTGAAGGCATAATGT 59.561 33.333 5.85 0.00 33.83 2.71
4452 7354 7.095523 CCACAAAAAGAGTTTGAAGGCATAATG 60.096 37.037 5.85 0.00 33.83 1.90
4453 7355 6.930722 CCACAAAAAGAGTTTGAAGGCATAAT 59.069 34.615 5.85 0.00 33.83 1.28
4454 7356 6.097554 TCCACAAAAAGAGTTTGAAGGCATAA 59.902 34.615 5.85 0.00 33.83 1.90
4455 7357 5.596361 TCCACAAAAAGAGTTTGAAGGCATA 59.404 36.000 5.85 0.00 33.83 3.14
4456 7358 4.405358 TCCACAAAAAGAGTTTGAAGGCAT 59.595 37.500 5.85 0.00 33.83 4.40
4457 7359 3.766591 TCCACAAAAAGAGTTTGAAGGCA 59.233 39.130 5.85 0.00 33.83 4.75
4458 7360 4.142160 ACTCCACAAAAAGAGTTTGAAGGC 60.142 41.667 5.85 0.00 40.43 4.35
4459 7361 5.125417 TCACTCCACAAAAAGAGTTTGAAGG 59.875 40.000 5.85 7.12 41.38 3.46
4460 7362 6.194796 TCACTCCACAAAAAGAGTTTGAAG 57.805 37.500 5.85 3.42 41.38 3.02
4461 7363 6.582677 TTCACTCCACAAAAAGAGTTTGAA 57.417 33.333 5.85 0.00 41.38 2.69
4462 7364 6.208599 AGTTTCACTCCACAAAAAGAGTTTGA 59.791 34.615 5.85 0.00 41.38 2.69
4463 7365 6.389906 AGTTTCACTCCACAAAAAGAGTTTG 58.610 36.000 0.00 0.00 41.38 2.93
4464 7366 6.590234 AGTTTCACTCCACAAAAAGAGTTT 57.410 33.333 0.00 0.00 41.38 2.66
4465 7367 7.881775 ATAGTTTCACTCCACAAAAAGAGTT 57.118 32.000 0.00 0.00 41.38 3.01
4466 7368 7.881775 AATAGTTTCACTCCACAAAAAGAGT 57.118 32.000 0.00 0.00 44.12 3.24
4469 7371 9.965824 ACAATAATAGTTTCACTCCACAAAAAG 57.034 29.630 0.00 0.00 0.00 2.27
4498 7400 9.551734 CTCATTGAAGTTGAATATCATGTCCTA 57.448 33.333 0.00 0.00 0.00 2.94
4499 7401 8.270030 TCTCATTGAAGTTGAATATCATGTCCT 58.730 33.333 0.00 0.00 0.00 3.85
4500 7402 8.442632 TCTCATTGAAGTTGAATATCATGTCC 57.557 34.615 0.00 0.00 0.00 4.02
4501 7403 9.932699 CTTCTCATTGAAGTTGAATATCATGTC 57.067 33.333 0.00 0.00 45.26 3.06
4567 7469 9.793259 ACTCTTCCTTTTTCAAATAGTATGACA 57.207 29.630 0.00 0.00 0.00 3.58
4569 7471 9.231297 CCACTCTTCCTTTTTCAAATAGTATGA 57.769 33.333 0.00 0.00 0.00 2.15
4570 7472 9.231297 TCCACTCTTCCTTTTTCAAATAGTATG 57.769 33.333 0.00 0.00 0.00 2.39
4571 7473 9.807921 TTCCACTCTTCCTTTTTCAAATAGTAT 57.192 29.630 0.00 0.00 0.00 2.12
4572 7474 9.635404 TTTCCACTCTTCCTTTTTCAAATAGTA 57.365 29.630 0.00 0.00 0.00 1.82
4573 7475 8.414003 GTTTCCACTCTTCCTTTTTCAAATAGT 58.586 33.333 0.00 0.00 0.00 2.12
4574 7476 8.413229 TGTTTCCACTCTTCCTTTTTCAAATAG 58.587 33.333 0.00 0.00 0.00 1.73
4575 7477 8.299990 TGTTTCCACTCTTCCTTTTTCAAATA 57.700 30.769 0.00 0.00 0.00 1.40
4576 7478 7.181569 TGTTTCCACTCTTCCTTTTTCAAAT 57.818 32.000 0.00 0.00 0.00 2.32
4577 7479 6.597832 TGTTTCCACTCTTCCTTTTTCAAA 57.402 33.333 0.00 0.00 0.00 2.69
4578 7480 6.790232 ATGTTTCCACTCTTCCTTTTTCAA 57.210 33.333 0.00 0.00 0.00 2.69
4579 7481 6.572519 CAATGTTTCCACTCTTCCTTTTTCA 58.427 36.000 0.00 0.00 0.00 2.69
4580 7482 5.463392 GCAATGTTTCCACTCTTCCTTTTTC 59.537 40.000 0.00 0.00 0.00 2.29
4581 7483 5.359756 GCAATGTTTCCACTCTTCCTTTTT 58.640 37.500 0.00 0.00 0.00 1.94
4582 7484 4.948847 GCAATGTTTCCACTCTTCCTTTT 58.051 39.130 0.00 0.00 0.00 2.27
4583 7485 4.590850 GCAATGTTTCCACTCTTCCTTT 57.409 40.909 0.00 0.00 0.00 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.