Multiple sequence alignment - TraesCS1A01G344200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G344200 chr1A 100.000 3553 0 0 1 3553 532360396 532363948 0.000000e+00 6562.0
1 TraesCS1A01G344200 chr1A 87.879 99 8 3 3129 3226 15915156 15915251 2.900000e-21 113.0
2 TraesCS1A01G344200 chr1D 90.318 1508 115 16 1126 2618 434234406 434235897 0.000000e+00 1947.0
3 TraesCS1A01G344200 chr1D 86.074 1350 142 29 1150 2471 434157302 434158633 0.000000e+00 1410.0
4 TraesCS1A01G344200 chr1D 87.324 213 19 7 2633 2843 434158846 434159052 1.650000e-58 237.0
5 TraesCS1A01G344200 chr1D 88.393 112 12 1 3432 3542 434236531 434236642 2.230000e-27 134.0
6 TraesCS1A01G344200 chr1D 94.737 38 2 0 931 968 58863722 58863685 3.830000e-05 60.2
7 TraesCS1A01G344200 chr1B 93.405 1304 68 4 1125 2410 587660667 587661970 0.000000e+00 1916.0
8 TraesCS1A01G344200 chr1B 87.130 878 76 26 1 860 526369781 526368923 0.000000e+00 961.0
9 TraesCS1A01G344200 chr1B 92.079 606 45 2 1875 2480 587273901 587274503 0.000000e+00 850.0
10 TraesCS1A01G344200 chr1B 80.563 746 108 20 1150 1867 587268010 587268746 1.120000e-149 540.0
11 TraesCS1A01G344200 chr1B 77.901 629 108 22 1159 1769 587659200 587659815 2.610000e-96 363.0
12 TraesCS1A01G344200 chr1B 83.912 317 36 7 3247 3553 587662551 587662862 4.490000e-74 289.0
13 TraesCS1A01G344200 chr1B 87.047 193 23 2 2651 2843 587274960 587275150 2.150000e-52 217.0
14 TraesCS1A01G344200 chr1B 84.667 150 20 3 2694 2843 587662254 587662400 2.860000e-31 147.0
15 TraesCS1A01G344200 chr1B 83.030 165 18 5 2982 3145 587275138 587275293 1.330000e-29 141.0
16 TraesCS1A01G344200 chr1B 86.916 107 13 1 3440 3545 587275419 587275525 6.230000e-23 119.0
17 TraesCS1A01G344200 chr2A 95.829 983 37 3 1 982 88090004 88089025 0.000000e+00 1585.0
18 TraesCS1A01G344200 chr2A 83.688 141 22 1 2842 2982 532081147 532081286 8.000000e-27 132.0
19 TraesCS1A01G344200 chr2A 87.879 99 9 3 3138 3235 722077288 722077192 2.900000e-21 113.0
20 TraesCS1A01G344200 chr2D 88.497 878 61 17 1 844 22798228 22797357 0.000000e+00 1026.0
21 TraesCS1A01G344200 chr2D 89.796 98 7 3 3133 3229 643235913 643235818 4.820000e-24 122.0
22 TraesCS1A01G344200 chr3D 88.055 879 64 15 1 844 600526727 600527599 0.000000e+00 1003.0
23 TraesCS1A01G344200 chr3D 91.784 499 33 5 1 491 517802588 517802090 0.000000e+00 688.0
24 TraesCS1A01G344200 chr3D 90.390 385 26 10 475 851 517801847 517801466 2.460000e-136 496.0
25 TraesCS1A01G344200 chr3D 91.011 89 6 2 3138 3226 436676900 436676986 6.230000e-23 119.0
26 TraesCS1A01G344200 chr3D 90.110 91 7 2 3138 3228 434025880 434025792 2.240000e-22 117.0
27 TraesCS1A01G344200 chr3D 91.463 82 5 2 3138 3219 429097509 429097588 1.040000e-20 111.0
28 TraesCS1A01G344200 chr3D 83.019 106 18 0 2878 2983 603690974 603690869 2.920000e-16 97.1
29 TraesCS1A01G344200 chr3D 94.286 35 2 0 933 967 8314980 8314946 2.000000e-03 54.7
30 TraesCS1A01G344200 chrUn 87.543 875 72 25 1 857 16755483 16756338 0.000000e+00 977.0
31 TraesCS1A01G344200 chrUn 78.599 1313 220 41 1148 2424 341188680 341187393 0.000000e+00 811.0
32 TraesCS1A01G344200 chrUn 88.889 99 6 4 3131 3227 77893455 77893550 2.240000e-22 117.0
33 TraesCS1A01G344200 chr2B 87.215 876 72 26 1 857 691176312 691177166 0.000000e+00 961.0
34 TraesCS1A01G344200 chr2B 87.001 877 74 28 1 857 40311604 40312460 0.000000e+00 952.0
35 TraesCS1A01G344200 chr7B 79.138 1323 218 36 1148 2432 28680168 28678866 0.000000e+00 861.0
36 TraesCS1A01G344200 chr7B 75.070 714 142 26 1155 1852 28693615 28692922 2.070000e-77 300.0
37 TraesCS1A01G344200 chr7D 78.599 1313 220 41 1148 2424 81668046 81666759 0.000000e+00 811.0
38 TraesCS1A01G344200 chr7D 78.463 1314 226 36 1145 2424 81360496 81361786 0.000000e+00 806.0
39 TraesCS1A01G344200 chr7D 79.523 1133 192 33 1148 2264 81772934 81771826 0.000000e+00 771.0
40 TraesCS1A01G344200 chr7D 81.928 166 21 7 3378 3542 81362599 81362756 8.000000e-27 132.0
41 TraesCS1A01G344200 chr7D 81.928 166 21 7 3378 3542 81665945 81665788 8.000000e-27 132.0
42 TraesCS1A01G344200 chr7D 86.792 106 14 0 2878 2983 614703115 614703010 6.230000e-23 119.0
43 TraesCS1A01G344200 chr7A 76.382 868 174 27 1148 1993 83733804 83732946 4.210000e-119 438.0
44 TraesCS1A01G344200 chr7A 83.333 366 46 7 2034 2387 83732948 83732586 1.230000e-84 324.0
45 TraesCS1A01G344200 chr3A 83.404 470 49 21 97 537 202617725 202617256 3.300000e-110 409.0
46 TraesCS1A01G344200 chr3A 83.117 154 19 6 2836 2983 709955578 709955426 2.230000e-27 134.0
47 TraesCS1A01G344200 chr3A 90.909 88 4 3 3138 3224 427762738 427762654 8.060000e-22 115.0
48 TraesCS1A01G344200 chr5A 87.000 100 8 4 3115 3214 590556163 590556257 1.350000e-19 108.0
49 TraesCS1A01G344200 chr5A 82.569 109 15 4 2879 2985 636634604 636634498 3.780000e-15 93.5
50 TraesCS1A01G344200 chr5A 85.227 88 13 0 2896 2983 31405265 31405178 1.360000e-14 91.6
51 TraesCS1A01G344200 chr4A 84.906 106 16 0 2878 2983 429713507 429713612 1.350000e-19 108.0
52 TraesCS1A01G344200 chr5D 77.465 142 32 0 2842 2983 542276609 542276468 6.320000e-13 86.1
53 TraesCS1A01G344200 chr5D 80.734 109 17 4 2879 2985 509433204 509433098 8.180000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G344200 chr1A 532360396 532363948 3552 False 6562.00 6562 100.00000 1 3553 1 chr1A.!!$F2 3552
1 TraesCS1A01G344200 chr1D 434234406 434236642 2236 False 1040.50 1947 89.35550 1126 3542 2 chr1D.!!$F2 2416
2 TraesCS1A01G344200 chr1D 434157302 434159052 1750 False 823.50 1410 86.69900 1150 2843 2 chr1D.!!$F1 1693
3 TraesCS1A01G344200 chr1B 526368923 526369781 858 True 961.00 961 87.13000 1 860 1 chr1B.!!$R1 859
4 TraesCS1A01G344200 chr1B 587659200 587662862 3662 False 678.75 1916 84.97125 1125 3553 4 chr1B.!!$F3 2428
5 TraesCS1A01G344200 chr1B 587268010 587268746 736 False 540.00 540 80.56300 1150 1867 1 chr1B.!!$F1 717
6 TraesCS1A01G344200 chr1B 587273901 587275525 1624 False 331.75 850 87.26800 1875 3545 4 chr1B.!!$F2 1670
7 TraesCS1A01G344200 chr2A 88089025 88090004 979 True 1585.00 1585 95.82900 1 982 1 chr2A.!!$R1 981
8 TraesCS1A01G344200 chr2D 22797357 22798228 871 True 1026.00 1026 88.49700 1 844 1 chr2D.!!$R1 843
9 TraesCS1A01G344200 chr3D 600526727 600527599 872 False 1003.00 1003 88.05500 1 844 1 chr3D.!!$F3 843
10 TraesCS1A01G344200 chr3D 517801466 517802588 1122 True 592.00 688 91.08700 1 851 2 chr3D.!!$R4 850
11 TraesCS1A01G344200 chrUn 16755483 16756338 855 False 977.00 977 87.54300 1 857 1 chrUn.!!$F1 856
12 TraesCS1A01G344200 chrUn 341187393 341188680 1287 True 811.00 811 78.59900 1148 2424 1 chrUn.!!$R1 1276
13 TraesCS1A01G344200 chr2B 691176312 691177166 854 False 961.00 961 87.21500 1 857 1 chr2B.!!$F2 856
14 TraesCS1A01G344200 chr2B 40311604 40312460 856 False 952.00 952 87.00100 1 857 1 chr2B.!!$F1 856
15 TraesCS1A01G344200 chr7B 28678866 28680168 1302 True 861.00 861 79.13800 1148 2432 1 chr7B.!!$R1 1284
16 TraesCS1A01G344200 chr7B 28692922 28693615 693 True 300.00 300 75.07000 1155 1852 1 chr7B.!!$R2 697
17 TraesCS1A01G344200 chr7D 81771826 81772934 1108 True 771.00 771 79.52300 1148 2264 1 chr7D.!!$R1 1116
18 TraesCS1A01G344200 chr7D 81665788 81668046 2258 True 471.50 811 80.26350 1148 3542 2 chr7D.!!$R3 2394
19 TraesCS1A01G344200 chr7D 81360496 81362756 2260 False 469.00 806 80.19550 1145 3542 2 chr7D.!!$F1 2397
20 TraesCS1A01G344200 chr7A 83732586 83733804 1218 True 381.00 438 79.85750 1148 2387 2 chr7A.!!$R1 1239

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
628 922 0.89553 TCGGCAATCCTCTCTCGTTT 59.104 50.0 0.0 0.0 0.0 3.6 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2592 3191 0.468029 CTGGGAAACTGGTTGGTGCT 60.468 55.0 0.0 0.0 0.0 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.027170 GCAATCACCACGGCGACAG 62.027 63.158 16.62 3.65 0.00 3.51
52 53 2.178273 CGATCGACACGGTCAGCA 59.822 61.111 10.26 0.00 36.73 4.41
170 183 5.010516 ACAAATAAACATGCCACTGCTACAA 59.989 36.000 0.00 0.00 38.71 2.41
628 922 0.895530 TCGGCAATCCTCTCTCGTTT 59.104 50.000 0.00 0.00 0.00 3.60
697 1023 1.289380 GCGTCTCTTCTTCCCGTGT 59.711 57.895 0.00 0.00 0.00 4.49
837 1172 3.353836 CACCCGAACACTTGCCCG 61.354 66.667 0.00 0.00 0.00 6.13
876 1211 1.339631 CCCAAGACAGGCCGAAATACA 60.340 52.381 0.00 0.00 0.00 2.29
889 1224 1.132453 GAAATACAGGACAAAGCGCCC 59.868 52.381 2.29 0.00 0.00 6.13
905 1240 1.668419 GCCCAAGCGTGAATCTACAT 58.332 50.000 0.00 0.00 0.00 2.29
935 1270 3.726517 CGAACGGCTGGGCAGTTG 61.727 66.667 12.10 2.77 45.72 3.16
982 1317 3.003480 GACTGATTTTTAGCAGCTCCGT 58.997 45.455 0.00 0.00 35.57 4.69
983 1318 3.412386 ACTGATTTTTAGCAGCTCCGTT 58.588 40.909 0.00 0.00 35.57 4.44
984 1319 3.821033 ACTGATTTTTAGCAGCTCCGTTT 59.179 39.130 0.00 0.00 35.57 3.60
985 1320 5.001232 ACTGATTTTTAGCAGCTCCGTTTA 58.999 37.500 0.00 0.00 35.57 2.01
986 1321 5.648092 ACTGATTTTTAGCAGCTCCGTTTAT 59.352 36.000 0.00 0.00 35.57 1.40
987 1322 6.821665 ACTGATTTTTAGCAGCTCCGTTTATA 59.178 34.615 0.00 0.00 35.57 0.98
988 1323 7.011482 ACTGATTTTTAGCAGCTCCGTTTATAG 59.989 37.037 0.00 0.00 35.57 1.31
989 1324 6.821665 TGATTTTTAGCAGCTCCGTTTATAGT 59.178 34.615 0.00 0.00 0.00 2.12
990 1325 7.335924 TGATTTTTAGCAGCTCCGTTTATAGTT 59.664 33.333 0.00 0.00 0.00 2.24
993 1328 4.056092 AGCAGCTCCGTTTATAGTTACC 57.944 45.455 0.00 0.00 0.00 2.85
994 1329 2.793232 GCAGCTCCGTTTATAGTTACCG 59.207 50.000 0.00 0.00 0.00 4.02
995 1330 3.378339 CAGCTCCGTTTATAGTTACCGG 58.622 50.000 0.00 0.00 39.98 5.28
996 1331 2.130395 GCTCCGTTTATAGTTACCGGC 58.870 52.381 0.00 0.00 38.54 6.13
997 1332 2.747436 CTCCGTTTATAGTTACCGGCC 58.253 52.381 0.00 0.00 38.54 6.13
998 1333 1.066908 TCCGTTTATAGTTACCGGCCG 59.933 52.381 21.04 21.04 38.54 6.13
1001 1336 3.383761 CGTTTATAGTTACCGGCCGAAT 58.616 45.455 30.73 17.52 0.00 3.34
1004 1339 6.321717 CGTTTATAGTTACCGGCCGAATATA 58.678 40.000 30.73 17.06 0.00 0.86
1006 1341 7.328249 CGTTTATAGTTACCGGCCGAATATAAA 59.672 37.037 30.73 25.68 0.00 1.40
1007 1342 8.987890 GTTTATAGTTACCGGCCGAATATAAAA 58.012 33.333 30.73 13.85 30.00 1.52
1027 1362 4.663636 AAAAAGATCAGTAAAGGACGCG 57.336 40.909 3.53 3.53 0.00 6.01
1028 1363 3.314541 AAAGATCAGTAAAGGACGCGT 57.685 42.857 13.85 13.85 0.00 6.01
1029 1364 3.314541 AAGATCAGTAAAGGACGCGTT 57.685 42.857 15.53 0.00 0.00 4.84
1030 1365 3.314541 AGATCAGTAAAGGACGCGTTT 57.685 42.857 15.53 6.54 0.00 3.60
1032 1367 0.863144 TCAGTAAAGGACGCGTTTGC 59.137 50.000 15.53 7.77 37.91 3.68
1033 1368 0.865769 CAGTAAAGGACGCGTTTGCT 59.134 50.000 15.53 10.31 39.65 3.91
1035 1370 0.165295 GTAAAGGACGCGTTTGCTCC 59.835 55.000 15.53 9.92 39.65 4.70
1036 1371 0.952010 TAAAGGACGCGTTTGCTCCC 60.952 55.000 15.53 9.05 38.45 4.30
1039 1374 2.813908 GACGCGTTTGCTCCCGAT 60.814 61.111 15.53 0.00 39.65 4.18
1040 1375 2.799540 GACGCGTTTGCTCCCGATC 61.800 63.158 15.53 0.00 39.65 3.69
1041 1376 3.913573 CGCGTTTGCTCCCGATCG 61.914 66.667 8.51 8.51 39.65 3.69
1042 1377 2.508439 GCGTTTGCTCCCGATCGA 60.508 61.111 18.66 0.00 38.39 3.59
1043 1378 1.883084 GCGTTTGCTCCCGATCGAT 60.883 57.895 18.66 0.00 38.39 3.59
1045 1380 1.643832 GTTTGCTCCCGATCGATGC 59.356 57.895 18.66 17.06 0.00 3.91
1046 1381 1.882625 TTTGCTCCCGATCGATGCG 60.883 57.895 18.66 6.46 0.00 4.73
1047 1382 4.950062 TGCTCCCGATCGATGCGC 62.950 66.667 18.66 14.06 0.00 6.09
1048 1383 4.654412 GCTCCCGATCGATGCGCT 62.654 66.667 18.66 0.00 0.00 5.92
1049 1384 2.954611 CTCCCGATCGATGCGCTA 59.045 61.111 18.66 0.00 0.00 4.26
1051 1386 1.578206 CTCCCGATCGATGCGCTAGA 61.578 60.000 18.66 5.66 0.00 2.43
1052 1387 1.442857 CCCGATCGATGCGCTAGAC 60.443 63.158 18.66 0.00 0.00 2.59
1053 1388 1.282875 CCGATCGATGCGCTAGACA 59.717 57.895 18.66 0.00 0.00 3.41
1054 1389 0.727457 CCGATCGATGCGCTAGACAG 60.727 60.000 18.66 3.30 0.00 3.51
1056 1391 0.593618 GATCGATGCGCTAGACAGGA 59.406 55.000 9.73 0.00 0.00 3.86
1057 1392 0.595588 ATCGATGCGCTAGACAGGAG 59.404 55.000 9.73 0.00 0.00 3.69
1060 1395 1.846541 GATGCGCTAGACAGGAGAAC 58.153 55.000 9.73 0.00 0.00 3.01
1061 1396 1.407258 GATGCGCTAGACAGGAGAACT 59.593 52.381 9.73 0.00 0.00 3.01
1062 1397 1.257743 TGCGCTAGACAGGAGAACTT 58.742 50.000 9.73 0.00 0.00 2.66
1063 1398 1.202582 TGCGCTAGACAGGAGAACTTC 59.797 52.381 9.73 0.00 0.00 3.01
1065 1400 1.795889 CGCTAGACAGGAGAACTTCGC 60.796 57.143 0.00 0.00 0.00 4.70
1066 1401 1.202582 GCTAGACAGGAGAACTTCGCA 59.797 52.381 0.00 0.00 0.00 5.10
1067 1402 2.352814 GCTAGACAGGAGAACTTCGCAA 60.353 50.000 0.00 0.00 0.00 4.85
1068 1403 2.156343 AGACAGGAGAACTTCGCAAC 57.844 50.000 0.00 0.00 0.00 4.17
1070 1405 1.795286 GACAGGAGAACTTCGCAACAG 59.205 52.381 0.00 0.00 0.00 3.16
1071 1406 1.151668 CAGGAGAACTTCGCAACAGG 58.848 55.000 0.00 0.00 0.00 4.00
1073 1408 1.968493 AGGAGAACTTCGCAACAGGTA 59.032 47.619 0.00 0.00 0.00 3.08
1074 1409 2.367567 AGGAGAACTTCGCAACAGGTAA 59.632 45.455 0.00 0.00 0.00 2.85
1075 1410 3.135994 GGAGAACTTCGCAACAGGTAAA 58.864 45.455 0.00 0.00 0.00 2.01
1078 1413 1.944032 ACTTCGCAACAGGTAAACGT 58.056 45.000 0.00 0.00 0.00 3.99
1080 1415 1.595794 CTTCGCAACAGGTAAACGTGT 59.404 47.619 2.74 2.74 45.60 4.49
1090 1425 5.344884 ACAGGTAAACGTGTTTGATTTTGG 58.655 37.500 8.19 0.00 41.57 3.28
1091 1426 5.105675 ACAGGTAAACGTGTTTGATTTTGGT 60.106 36.000 8.19 0.00 41.57 3.67
1092 1427 5.231147 CAGGTAAACGTGTTTGATTTTGGTG 59.769 40.000 8.19 0.00 34.23 4.17
1093 1428 5.103687 GGTAAACGTGTTTGATTTTGGTGT 58.896 37.500 8.19 0.00 34.23 4.16
1095 1430 4.442375 AACGTGTTTGATTTTGGTGTGA 57.558 36.364 0.00 0.00 0.00 3.58
1096 1431 4.027572 ACGTGTTTGATTTTGGTGTGAG 57.972 40.909 0.00 0.00 0.00 3.51
1098 1433 4.338118 ACGTGTTTGATTTTGGTGTGAGAT 59.662 37.500 0.00 0.00 0.00 2.75
1099 1434 4.911610 CGTGTTTGATTTTGGTGTGAGATC 59.088 41.667 0.00 0.00 0.00 2.75
1100 1435 5.222631 GTGTTTGATTTTGGTGTGAGATCC 58.777 41.667 0.00 0.00 0.00 3.36
1101 1436 5.010012 GTGTTTGATTTTGGTGTGAGATCCT 59.990 40.000 0.00 0.00 0.00 3.24
1102 1437 5.009911 TGTTTGATTTTGGTGTGAGATCCTG 59.990 40.000 0.00 0.00 0.00 3.86
1103 1438 4.639078 TGATTTTGGTGTGAGATCCTGA 57.361 40.909 0.00 0.00 0.00 3.86
1104 1439 5.183530 TGATTTTGGTGTGAGATCCTGAT 57.816 39.130 0.00 0.00 0.00 2.90
1106 1441 2.967599 TTGGTGTGAGATCCTGATCG 57.032 50.000 1.67 0.00 42.48 3.69
1108 1443 2.456577 TGGTGTGAGATCCTGATCGAA 58.543 47.619 0.00 0.00 42.48 3.71
1110 1445 2.468831 GTGTGAGATCCTGATCGAAGC 58.531 52.381 0.00 0.00 42.48 3.86
1111 1446 2.100584 GTGTGAGATCCTGATCGAAGCT 59.899 50.000 0.00 0.00 42.48 3.74
1112 1447 3.316588 GTGTGAGATCCTGATCGAAGCTA 59.683 47.826 0.00 0.00 42.48 3.32
1113 1448 3.954258 TGTGAGATCCTGATCGAAGCTAA 59.046 43.478 0.00 0.00 42.48 3.09
1114 1449 4.402474 TGTGAGATCCTGATCGAAGCTAAA 59.598 41.667 0.00 0.00 42.48 1.85
1116 1451 5.461737 GTGAGATCCTGATCGAAGCTAAAAG 59.538 44.000 0.00 0.00 42.48 2.27
1117 1452 5.127845 TGAGATCCTGATCGAAGCTAAAAGT 59.872 40.000 0.00 0.00 42.48 2.66
1118 1453 5.596845 AGATCCTGATCGAAGCTAAAAGTC 58.403 41.667 0.00 0.00 42.48 3.01
1120 1455 2.282820 CCTGATCGAAGCTAAAAGTCGC 59.717 50.000 0.00 0.00 34.80 5.19
1124 1459 1.198408 TCGAAGCTAAAAGTCGCGAGA 59.802 47.619 10.24 0.00 34.80 4.04
1125 1460 1.983605 CGAAGCTAAAAGTCGCGAGAA 59.016 47.619 10.24 0.00 45.01 2.87
1127 1462 3.060895 CGAAGCTAAAAGTCGCGAGAAAT 59.939 43.478 10.24 0.00 45.01 2.17
1223 1588 4.147449 CGCCCATGGACGCTCTCA 62.147 66.667 15.22 0.00 0.00 3.27
1350 1715 0.613777 ATCTTCCGCCGTTTCCTCTT 59.386 50.000 0.00 0.00 0.00 2.85
1357 1722 1.218316 CCGTTTCCTCTTCCTCCGG 59.782 63.158 0.00 0.00 0.00 5.14
1394 1759 1.375908 GTCATCCTCACCAAGCGCA 60.376 57.895 11.47 0.00 0.00 6.09
1512 1883 4.740822 CTTCCAAGGCCACCCCGG 62.741 72.222 5.01 0.00 39.21 5.73
1585 1957 3.154473 TCTCCTGCGGCCGCTATT 61.154 61.111 45.79 0.00 42.51 1.73
1675 2047 2.431454 ATGGTCCGCTACGCCATCA 61.431 57.895 0.00 0.00 38.52 3.07
1787 2165 0.032403 TGGGTCGTGGTTAACTCGTG 59.968 55.000 17.67 3.51 37.36 4.35
1878 2265 4.039124 ACCAAAAGGAACACCATGAATGAC 59.961 41.667 0.00 0.00 0.00 3.06
2037 2424 2.184020 AATGCGTGCTGCTCTGGGTA 62.184 55.000 0.00 0.00 46.63 3.69
2311 2707 2.147436 TCCATTCTTTTTGCGGTTGC 57.853 45.000 0.00 0.00 43.20 4.17
2396 2938 5.757850 AATCTCCTATTTGATCCGTTTGC 57.242 39.130 0.00 0.00 0.00 3.68
2406 2948 9.817365 CTATTTGATCCGTTTGCTAGATTTATG 57.183 33.333 0.00 0.00 0.00 1.90
2463 3005 9.826574 ATTTAATTATCTGTGCAAATTGCTCAT 57.173 25.926 20.73 11.27 44.44 2.90
2483 3025 1.202687 TCAAGCCATCCGGATCATGAC 60.203 52.381 15.88 0.00 0.00 3.06
2484 3026 0.839277 AAGCCATCCGGATCATGACA 59.161 50.000 15.88 0.00 0.00 3.58
2485 3027 0.107456 AGCCATCCGGATCATGACAC 59.893 55.000 15.88 0.00 0.00 3.67
2486 3028 0.886490 GCCATCCGGATCATGACACC 60.886 60.000 15.88 3.98 0.00 4.16
2488 3030 1.970640 CCATCCGGATCATGACACCTA 59.029 52.381 15.88 7.01 0.00 3.08
2492 3034 2.031870 CCGGATCATGACACCTAGTGA 58.968 52.381 15.70 0.00 36.96 3.41
2497 3039 4.279671 GGATCATGACACCTAGTGACCTAG 59.720 50.000 0.00 0.00 40.42 3.02
2507 3049 2.765689 AGTGACCTAGGGGAGATCAG 57.234 55.000 14.81 0.00 36.25 2.90
2508 3050 1.219213 AGTGACCTAGGGGAGATCAGG 59.781 57.143 14.81 0.00 36.25 3.86
2511 3064 0.563672 ACCTAGGGGAGATCAGGTCC 59.436 60.000 14.81 0.00 36.69 4.46
2524 3077 3.208747 TCAGGTCCCTGTTCTGAAAAC 57.791 47.619 12.88 0.00 43.96 2.43
2533 3120 4.342092 CCCTGTTCTGAAAACTTTCATGGT 59.658 41.667 5.38 0.00 45.26 3.55
2587 3186 5.590530 ACATTGCACCTTTTGTTCAGTTA 57.409 34.783 0.00 0.00 0.00 2.24
2592 3191 6.761099 TGCACCTTTTGTTCAGTTAACTTA 57.239 33.333 5.07 0.00 38.99 2.24
2618 3217 5.016831 ACCAACCAGTTTCCCAGATTATTC 58.983 41.667 0.00 0.00 0.00 1.75
2624 3472 6.155049 ACCAGTTTCCCAGATTATTCAATTGG 59.845 38.462 5.42 0.00 0.00 3.16
2630 3478 6.129179 TCCCAGATTATTCAATTGGGACTTC 58.871 40.000 5.42 0.00 41.52 3.01
2641 3489 6.377912 TCAATTGGGACTTCCTTCCTTAAAA 58.622 36.000 5.42 0.00 35.76 1.52
2642 3490 7.016296 TCAATTGGGACTTCCTTCCTTAAAAT 58.984 34.615 5.42 0.00 35.76 1.82
2643 3491 6.857437 ATTGGGACTTCCTTCCTTAAAATG 57.143 37.500 0.00 0.00 35.76 2.32
2645 3493 5.959512 TGGGACTTCCTTCCTTAAAATGAA 58.040 37.500 0.00 0.00 35.76 2.57
2646 3494 6.561294 TGGGACTTCCTTCCTTAAAATGAAT 58.439 36.000 0.00 0.00 35.76 2.57
2647 3495 6.437162 TGGGACTTCCTTCCTTAAAATGAATG 59.563 38.462 0.00 0.00 35.76 2.67
2648 3496 6.437477 GGGACTTCCTTCCTTAAAATGAATGT 59.563 38.462 0.00 0.00 35.76 2.71
2649 3497 7.614192 GGGACTTCCTTCCTTAAAATGAATGTA 59.386 37.037 0.00 0.00 35.76 2.29
2663 3539 4.186077 TGAATGTACCCCTGTTTTCCAA 57.814 40.909 0.00 0.00 0.00 3.53
2668 3544 7.290248 TGAATGTACCCCTGTTTTCCAAATTAA 59.710 33.333 0.00 0.00 0.00 1.40
2686 3562 9.565213 CCAAATTAATTTTCTAGAACTCAGCAG 57.435 33.333 10.77 0.00 0.00 4.24
2701 3578 5.248640 ACTCAGCAGCATGTGTAAAAGTAT 58.751 37.500 0.00 0.00 39.31 2.12
2702 3579 5.352569 ACTCAGCAGCATGTGTAAAAGTATC 59.647 40.000 0.00 0.00 39.31 2.24
2706 3583 5.352569 AGCAGCATGTGTAAAAGTATCTGAC 59.647 40.000 0.00 0.00 39.31 3.51
2730 3607 4.935702 TGTTTCCAGAAGCTGTTGATTTG 58.064 39.130 0.00 0.00 0.00 2.32
2748 3625 2.363306 TGATTGTGTCTGGTTTGCCT 57.637 45.000 0.00 0.00 35.27 4.75
2763 3640 5.107133 GGTTTGCCTCAGATGATTTGATTG 58.893 41.667 0.00 0.00 0.00 2.67
2777 3654 7.649533 TGATTTGATTGAGTGCTAATCCATT 57.350 32.000 0.00 0.00 34.43 3.16
2846 3723 8.645487 GGAACTACTCAGTTGTTTATTTAGTCG 58.355 37.037 6.08 0.00 45.18 4.18
2847 3724 7.578169 ACTACTCAGTTGTTTATTTAGTCGC 57.422 36.000 0.00 0.00 0.00 5.19
2848 3725 5.511088 ACTCAGTTGTTTATTTAGTCGCG 57.489 39.130 0.00 0.00 0.00 5.87
2849 3726 4.986659 ACTCAGTTGTTTATTTAGTCGCGT 59.013 37.500 5.77 0.00 0.00 6.01
2850 3727 5.107607 ACTCAGTTGTTTATTTAGTCGCGTG 60.108 40.000 5.77 0.00 0.00 5.34
2851 3728 3.838550 CAGTTGTTTATTTAGTCGCGTGC 59.161 43.478 5.77 0.00 0.00 5.34
2852 3729 2.773036 TGTTTATTTAGTCGCGTGCG 57.227 45.000 5.77 8.14 41.35 5.34
2853 3730 2.060284 TGTTTATTTAGTCGCGTGCGT 58.940 42.857 14.47 0.00 40.74 5.24
2854 3731 2.090967 TGTTTATTTAGTCGCGTGCGTC 59.909 45.455 14.47 8.82 40.74 5.19
2855 3732 1.270971 TTATTTAGTCGCGTGCGTCC 58.729 50.000 14.47 6.37 40.74 4.79
2856 3733 0.452987 TATTTAGTCGCGTGCGTCCT 59.547 50.000 14.47 13.13 40.74 3.85
2857 3734 0.452987 ATTTAGTCGCGTGCGTCCTA 59.547 50.000 14.47 12.19 40.74 2.94
2858 3735 0.454957 TTTAGTCGCGTGCGTCCTAC 60.455 55.000 14.47 4.94 40.74 3.18
2859 3736 2.567470 TTAGTCGCGTGCGTCCTACG 62.567 60.000 14.47 0.00 45.88 3.51
2860 3737 4.748679 GTCGCGTGCGTCCTACGT 62.749 66.667 14.47 0.00 44.73 3.57
2863 3740 3.467119 GCGTGCGTCCTACGTGTG 61.467 66.667 0.00 0.00 44.73 3.82
2864 3741 3.467119 CGTGCGTCCTACGTGTGC 61.467 66.667 0.00 0.00 44.73 4.57
2865 3742 3.110178 GTGCGTCCTACGTGTGCC 61.110 66.667 0.00 0.00 44.73 5.01
2866 3743 4.710695 TGCGTCCTACGTGTGCCG 62.711 66.667 0.00 0.00 44.73 5.69
2868 3745 3.740397 CGTCCTACGTGTGCCGGA 61.740 66.667 5.05 0.00 42.24 5.14
2869 3746 2.890371 GTCCTACGTGTGCCGGAT 59.110 61.111 5.05 0.00 42.24 4.18
2870 3747 1.717791 CGTCCTACGTGTGCCGGATA 61.718 60.000 5.05 0.00 42.24 2.59
2871 3748 0.672342 GTCCTACGTGTGCCGGATAT 59.328 55.000 5.05 0.00 42.24 1.63
2872 3749 0.956633 TCCTACGTGTGCCGGATATC 59.043 55.000 5.05 0.00 42.24 1.63
2873 3750 0.959553 CCTACGTGTGCCGGATATCT 59.040 55.000 5.05 0.00 42.24 1.98
2874 3751 1.068472 CCTACGTGTGCCGGATATCTC 60.068 57.143 5.05 0.00 42.24 2.75
2875 3752 1.607148 CTACGTGTGCCGGATATCTCA 59.393 52.381 5.05 0.00 42.24 3.27
2876 3753 0.821517 ACGTGTGCCGGATATCTCAA 59.178 50.000 5.05 0.00 42.24 3.02
2877 3754 1.202417 ACGTGTGCCGGATATCTCAAG 60.202 52.381 5.05 0.00 42.24 3.02
2878 3755 1.067060 CGTGTGCCGGATATCTCAAGA 59.933 52.381 5.05 0.00 0.00 3.02
2879 3756 2.288457 CGTGTGCCGGATATCTCAAGAT 60.288 50.000 5.05 0.00 38.51 2.40
2880 3757 3.321497 GTGTGCCGGATATCTCAAGATC 58.679 50.000 5.05 0.00 36.05 2.75
2881 3758 2.029918 TGTGCCGGATATCTCAAGATCG 60.030 50.000 5.05 0.00 36.05 3.69
2882 3759 1.546029 TGCCGGATATCTCAAGATCGG 59.454 52.381 5.05 12.05 40.37 4.18
2883 3760 2.285827 CCGGATATCTCAAGATCGGC 57.714 55.000 0.00 0.00 34.30 5.54
2884 3761 1.821753 CCGGATATCTCAAGATCGGCT 59.178 52.381 0.00 0.00 34.30 5.52
2885 3762 2.232452 CCGGATATCTCAAGATCGGCTT 59.768 50.000 0.00 0.00 34.30 4.35
2886 3763 3.306364 CCGGATATCTCAAGATCGGCTTT 60.306 47.826 0.00 0.00 34.30 3.51
2887 3764 3.923461 CGGATATCTCAAGATCGGCTTTC 59.077 47.826 2.05 0.00 33.60 2.62
2888 3765 4.321601 CGGATATCTCAAGATCGGCTTTCT 60.322 45.833 2.05 0.00 33.60 2.52
2889 3766 5.106118 CGGATATCTCAAGATCGGCTTTCTA 60.106 44.000 2.05 0.00 33.60 2.10
2890 3767 6.570571 CGGATATCTCAAGATCGGCTTTCTAA 60.571 42.308 2.05 0.00 33.60 2.10
2891 3768 6.811170 GGATATCTCAAGATCGGCTTTCTAAG 59.189 42.308 2.05 0.00 33.60 2.18
2892 3769 5.860941 ATCTCAAGATCGGCTTTCTAAGA 57.139 39.130 0.00 0.00 33.60 2.10
2893 3770 5.255710 TCTCAAGATCGGCTTTCTAAGAG 57.744 43.478 0.00 8.42 33.60 2.85
2894 3771 4.098654 TCTCAAGATCGGCTTTCTAAGAGG 59.901 45.833 12.03 0.00 33.60 3.69
2895 3772 3.133003 TCAAGATCGGCTTTCTAAGAGGG 59.867 47.826 0.00 0.00 33.60 4.30
2896 3773 1.414550 AGATCGGCTTTCTAAGAGGGC 59.585 52.381 0.00 0.00 0.00 5.19
2897 3774 1.414550 GATCGGCTTTCTAAGAGGGCT 59.585 52.381 0.00 0.00 0.00 5.19
2898 3775 2.154567 TCGGCTTTCTAAGAGGGCTA 57.845 50.000 0.00 0.00 0.00 3.93
2899 3776 1.755380 TCGGCTTTCTAAGAGGGCTAC 59.245 52.381 0.00 0.00 0.00 3.58
2900 3777 1.202545 CGGCTTTCTAAGAGGGCTACC 60.203 57.143 0.00 0.00 0.00 3.18
2915 3792 6.128138 AGGGCTACCTCACCATTTTATATC 57.872 41.667 0.00 0.00 46.95 1.63
2916 3793 4.935808 GGGCTACCTCACCATTTTATATCG 59.064 45.833 0.00 0.00 0.00 2.92
2917 3794 5.512576 GGGCTACCTCACCATTTTATATCGT 60.513 44.000 0.00 0.00 0.00 3.73
2918 3795 5.995897 GGCTACCTCACCATTTTATATCGTT 59.004 40.000 0.00 0.00 0.00 3.85
2919 3796 6.147328 GGCTACCTCACCATTTTATATCGTTC 59.853 42.308 0.00 0.00 0.00 3.95
2920 3797 6.128902 GCTACCTCACCATTTTATATCGTTCG 60.129 42.308 0.00 0.00 0.00 3.95
2921 3798 5.054477 ACCTCACCATTTTATATCGTTCGG 58.946 41.667 0.00 0.00 0.00 4.30
2922 3799 4.084013 CCTCACCATTTTATATCGTTCGGC 60.084 45.833 0.00 0.00 0.00 5.54
2923 3800 3.810941 TCACCATTTTATATCGTTCGGCC 59.189 43.478 0.00 0.00 0.00 6.13
2924 3801 2.803956 ACCATTTTATATCGTTCGGCCG 59.196 45.455 22.12 22.12 0.00 6.13
2925 3802 2.803956 CCATTTTATATCGTTCGGCCGT 59.196 45.455 27.15 7.91 0.00 5.68
2926 3803 3.363575 CCATTTTATATCGTTCGGCCGTG 60.364 47.826 27.15 16.45 0.00 4.94
2927 3804 2.582728 TTTATATCGTTCGGCCGTGT 57.417 45.000 27.15 6.07 0.00 4.49
2928 3805 3.706802 TTTATATCGTTCGGCCGTGTA 57.293 42.857 27.15 9.28 0.00 2.90
2929 3806 2.686558 TATATCGTTCGGCCGTGTAC 57.313 50.000 27.15 19.67 0.00 2.90
2930 3807 1.027357 ATATCGTTCGGCCGTGTACT 58.973 50.000 27.15 11.11 0.00 2.73
2931 3808 1.662517 TATCGTTCGGCCGTGTACTA 58.337 50.000 27.15 13.96 0.00 1.82
2932 3809 1.027357 ATCGTTCGGCCGTGTACTAT 58.973 50.000 27.15 15.53 0.00 2.12
2933 3810 0.099259 TCGTTCGGCCGTGTACTATG 59.901 55.000 27.15 10.04 0.00 2.23
2934 3811 0.179156 CGTTCGGCCGTGTACTATGT 60.179 55.000 27.15 0.00 0.00 2.29
2935 3812 1.733389 CGTTCGGCCGTGTACTATGTT 60.733 52.381 27.15 0.00 0.00 2.71
2936 3813 1.922545 GTTCGGCCGTGTACTATGTTC 59.077 52.381 27.15 0.00 0.00 3.18
2937 3814 0.099259 TCGGCCGTGTACTATGTTCG 59.901 55.000 27.15 0.00 0.00 3.95
2938 3815 0.868602 CGGCCGTGTACTATGTTCGG 60.869 60.000 19.50 0.00 43.37 4.30
2939 3816 0.457035 GGCCGTGTACTATGTTCGGA 59.543 55.000 6.09 0.00 43.22 4.55
2940 3817 1.068127 GGCCGTGTACTATGTTCGGAT 59.932 52.381 6.09 0.00 43.22 4.18
2941 3818 2.124903 GCCGTGTACTATGTTCGGATG 58.875 52.381 6.09 0.00 43.22 3.51
2942 3819 2.480759 GCCGTGTACTATGTTCGGATGT 60.481 50.000 6.09 0.00 43.22 3.06
2943 3820 3.777478 CCGTGTACTATGTTCGGATGTT 58.223 45.455 0.00 0.00 43.22 2.71
2944 3821 3.550275 CCGTGTACTATGTTCGGATGTTG 59.450 47.826 0.00 0.00 43.22 3.33
2945 3822 3.000078 CGTGTACTATGTTCGGATGTTGC 60.000 47.826 0.00 0.00 0.00 4.17
2946 3823 4.181578 GTGTACTATGTTCGGATGTTGCT 58.818 43.478 0.00 0.00 0.00 3.91
2947 3824 4.630069 GTGTACTATGTTCGGATGTTGCTT 59.370 41.667 0.00 0.00 0.00 3.91
2948 3825 5.121768 GTGTACTATGTTCGGATGTTGCTTT 59.878 40.000 0.00 0.00 0.00 3.51
2949 3826 6.311935 GTGTACTATGTTCGGATGTTGCTTTA 59.688 38.462 0.00 0.00 0.00 1.85
2950 3827 7.011109 GTGTACTATGTTCGGATGTTGCTTTAT 59.989 37.037 0.00 0.00 0.00 1.40
2951 3828 7.551262 TGTACTATGTTCGGATGTTGCTTTATT 59.449 33.333 0.00 0.00 0.00 1.40
2952 3829 7.391148 ACTATGTTCGGATGTTGCTTTATTT 57.609 32.000 0.00 0.00 0.00 1.40
2953 3830 7.472543 ACTATGTTCGGATGTTGCTTTATTTC 58.527 34.615 0.00 0.00 0.00 2.17
2954 3831 5.957842 TGTTCGGATGTTGCTTTATTTCT 57.042 34.783 0.00 0.00 0.00 2.52
2955 3832 7.624360 ATGTTCGGATGTTGCTTTATTTCTA 57.376 32.000 0.00 0.00 0.00 2.10
2956 3833 7.441890 TGTTCGGATGTTGCTTTATTTCTAA 57.558 32.000 0.00 0.00 0.00 2.10
2957 3834 7.877003 TGTTCGGATGTTGCTTTATTTCTAAA 58.123 30.769 0.00 0.00 0.00 1.85
2958 3835 8.020819 TGTTCGGATGTTGCTTTATTTCTAAAG 58.979 33.333 1.62 1.62 44.45 1.85
2959 3836 7.681939 TCGGATGTTGCTTTATTTCTAAAGT 57.318 32.000 6.89 0.00 43.81 2.66
2960 3837 7.526608 TCGGATGTTGCTTTATTTCTAAAGTG 58.473 34.615 6.89 0.00 43.81 3.16
2961 3838 6.747280 CGGATGTTGCTTTATTTCTAAAGTGG 59.253 38.462 6.89 0.00 43.81 4.00
2962 3839 7.035612 GGATGTTGCTTTATTTCTAAAGTGGG 58.964 38.462 6.89 0.00 43.81 4.61
2963 3840 6.339587 TGTTGCTTTATTTCTAAAGTGGGG 57.660 37.500 6.89 0.00 43.81 4.96
2964 3841 5.168569 GTTGCTTTATTTCTAAAGTGGGGC 58.831 41.667 6.89 0.00 43.81 5.80
2965 3842 3.442273 TGCTTTATTTCTAAAGTGGGGCG 59.558 43.478 6.89 0.00 43.81 6.13
2966 3843 3.692593 GCTTTATTTCTAAAGTGGGGCGA 59.307 43.478 6.89 0.00 43.81 5.54
2967 3844 4.157105 GCTTTATTTCTAAAGTGGGGCGAA 59.843 41.667 6.89 0.00 43.81 4.70
2968 3845 5.336134 GCTTTATTTCTAAAGTGGGGCGAAA 60.336 40.000 6.89 0.00 43.81 3.46
2969 3846 5.890424 TTATTTCTAAAGTGGGGCGAAAG 57.110 39.130 0.00 0.00 0.00 2.62
2970 3847 7.115071 CTTTATTTCTAAAGTGGGGCGAAAGC 61.115 42.308 0.00 0.00 45.80 3.51
2985 3862 3.528009 GAAAGCCTGTTTCGAGAGTTG 57.472 47.619 0.00 0.00 0.00 3.16
2986 3863 2.622064 AAGCCTGTTTCGAGAGTTGT 57.378 45.000 0.00 0.00 0.00 3.32
2987 3864 2.622064 AGCCTGTTTCGAGAGTTGTT 57.378 45.000 0.00 0.00 0.00 2.83
2988 3865 2.919228 AGCCTGTTTCGAGAGTTGTTT 58.081 42.857 0.00 0.00 0.00 2.83
2989 3866 4.067972 AGCCTGTTTCGAGAGTTGTTTA 57.932 40.909 0.00 0.00 0.00 2.01
2990 3867 4.642429 AGCCTGTTTCGAGAGTTGTTTAT 58.358 39.130 0.00 0.00 0.00 1.40
2991 3868 5.063880 AGCCTGTTTCGAGAGTTGTTTATT 58.936 37.500 0.00 0.00 0.00 1.40
2992 3869 5.531287 AGCCTGTTTCGAGAGTTGTTTATTT 59.469 36.000 0.00 0.00 0.00 1.40
2993 3870 6.708949 AGCCTGTTTCGAGAGTTGTTTATTTA 59.291 34.615 0.00 0.00 0.00 1.40
2994 3871 7.015877 GCCTGTTTCGAGAGTTGTTTATTTAG 58.984 38.462 0.00 0.00 0.00 1.85
3001 3878 9.483916 TTCGAGAGTTGTTTATTTAGTGATGAA 57.516 29.630 0.00 0.00 0.00 2.57
3039 3916 7.976135 ATATTGCAAACCTATCATGAGAGTC 57.024 36.000 15.87 1.28 0.00 3.36
3041 3918 4.763073 TGCAAACCTATCATGAGAGTCAG 58.237 43.478 15.87 3.82 0.00 3.51
3042 3919 4.467438 TGCAAACCTATCATGAGAGTCAGA 59.533 41.667 15.87 0.00 0.00 3.27
3043 3920 4.808364 GCAAACCTATCATGAGAGTCAGAC 59.192 45.833 15.87 0.00 0.00 3.51
3044 3921 5.395103 GCAAACCTATCATGAGAGTCAGACT 60.395 44.000 15.87 1.46 0.00 3.24
3045 3922 6.638610 CAAACCTATCATGAGAGTCAGACTT 58.361 40.000 15.87 0.00 0.00 3.01
3046 3923 7.631594 GCAAACCTATCATGAGAGTCAGACTTA 60.632 40.741 15.87 0.00 0.00 2.24
3047 3924 6.952773 ACCTATCATGAGAGTCAGACTTAC 57.047 41.667 15.87 2.94 0.00 2.34
3048 3925 5.830991 ACCTATCATGAGAGTCAGACTTACC 59.169 44.000 15.87 0.00 0.00 2.85
3049 3926 4.909696 ATCATGAGAGTCAGACTTACCG 57.090 45.455 4.05 0.00 0.00 4.02
3053 3930 2.229062 TGAGAGTCAGACTTACCGCTTG 59.771 50.000 4.05 0.00 0.00 4.01
3055 3932 0.388649 AGTCAGACTTACCGCTTGCG 60.389 55.000 8.14 8.14 0.00 4.85
3073 3950 1.993370 GCGAGTACAAGTGTGCTAAGG 59.007 52.381 1.78 0.00 41.05 2.69
3074 3951 2.607187 CGAGTACAAGTGTGCTAAGGG 58.393 52.381 1.78 0.00 41.05 3.95
3078 3955 5.242795 AGTACAAGTGTGCTAAGGGAAAT 57.757 39.130 0.00 0.00 39.21 2.17
3080 3957 4.098914 ACAAGTGTGCTAAGGGAAATCA 57.901 40.909 0.00 0.00 0.00 2.57
3109 3988 4.710324 TCTTGAAATGGTTCCACGTTACT 58.290 39.130 0.00 0.00 32.28 2.24
3146 4025 9.457436 TTTTCTTGTTTGTTTACTACTTCCTCT 57.543 29.630 0.00 0.00 0.00 3.69
3147 4026 8.433421 TTCTTGTTTGTTTACTACTTCCTCTG 57.567 34.615 0.00 0.00 0.00 3.35
3148 4027 7.562135 TCTTGTTTGTTTACTACTTCCTCTGT 58.438 34.615 0.00 0.00 0.00 3.41
3149 4028 8.698210 TCTTGTTTGTTTACTACTTCCTCTGTA 58.302 33.333 0.00 0.00 0.00 2.74
3150 4029 9.321562 CTTGTTTGTTTACTACTTCCTCTGTAA 57.678 33.333 0.00 0.00 0.00 2.41
3151 4030 9.669887 TTGTTTGTTTACTACTTCCTCTGTAAA 57.330 29.630 0.00 0.00 34.00 2.01
3152 4031 9.321562 TGTTTGTTTACTACTTCCTCTGTAAAG 57.678 33.333 0.00 0.00 36.13 1.85
3153 4032 9.538508 GTTTGTTTACTACTTCCTCTGTAAAGA 57.461 33.333 0.00 0.00 36.13 2.52
3183 4062 6.837471 AGAACGTTTTAGATCACTACTCCT 57.163 37.500 0.46 0.00 0.00 3.69
3184 4063 7.934855 AGAACGTTTTAGATCACTACTCCTA 57.065 36.000 0.46 0.00 0.00 2.94
3185 4064 7.987649 AGAACGTTTTAGATCACTACTCCTAG 58.012 38.462 0.46 0.00 0.00 3.02
3186 4065 7.611079 AGAACGTTTTAGATCACTACTCCTAGT 59.389 37.037 0.46 0.00 33.01 2.57
3199 4078 7.519032 ACTACTCCTAGTGATCTAAATGCTC 57.481 40.000 0.00 0.00 31.46 4.26
3200 4079 7.294584 ACTACTCCTAGTGATCTAAATGCTCT 58.705 38.462 0.00 0.00 31.46 4.09
3201 4080 7.782644 ACTACTCCTAGTGATCTAAATGCTCTT 59.217 37.037 0.00 0.00 31.46 2.85
3202 4081 9.290988 CTACTCCTAGTGATCTAAATGCTCTTA 57.709 37.037 0.00 0.00 0.00 2.10
3203 4082 8.719645 ACTCCTAGTGATCTAAATGCTCTTAT 57.280 34.615 0.00 0.00 0.00 1.73
3204 4083 9.815306 ACTCCTAGTGATCTAAATGCTCTTATA 57.185 33.333 0.00 0.00 0.00 0.98
3219 4098 8.614469 ATGCTCTTATATTTCTTTACAGAGGC 57.386 34.615 0.00 0.00 0.00 4.70
3220 4099 6.701841 TGCTCTTATATTTCTTTACAGAGGCG 59.298 38.462 0.00 0.00 0.00 5.52
3221 4100 6.146347 GCTCTTATATTTCTTTACAGAGGCGG 59.854 42.308 0.00 0.00 0.00 6.13
3222 4101 7.120923 TCTTATATTTCTTTACAGAGGCGGT 57.879 36.000 0.00 0.00 0.00 5.68
3223 4102 8.241497 TCTTATATTTCTTTACAGAGGCGGTA 57.759 34.615 0.00 0.00 0.00 4.02
3224 4103 8.867097 TCTTATATTTCTTTACAGAGGCGGTAT 58.133 33.333 0.00 0.00 0.00 2.73
3225 4104 9.490379 CTTATATTTCTTTACAGAGGCGGTATT 57.510 33.333 0.00 0.00 0.00 1.89
3236 4115 4.917415 CAGAGGCGGTATTTTTCTTTTGTG 59.083 41.667 0.00 0.00 0.00 3.33
3238 4117 4.866921 AGGCGGTATTTTTCTTTTGTGAC 58.133 39.130 0.00 0.00 0.00 3.67
3260 4139 5.552178 ACTTGAGACTTCACTTTATGGTCC 58.448 41.667 0.00 0.00 31.71 4.46
3293 4172 5.738909 AGTTAGCAGCTGAATTGTCTGTAT 58.261 37.500 20.43 0.00 0.00 2.29
3326 4212 2.844122 ACGTTCAGTTGGTTTTCAGC 57.156 45.000 0.00 0.00 0.00 4.26
3333 4219 3.337398 TTGGTTTTCAGCAACGCAC 57.663 47.368 0.00 0.00 35.42 5.34
3338 4224 1.098869 TTTTCAGCAACGCACCAAGA 58.901 45.000 0.00 0.00 0.00 3.02
3339 4225 1.098869 TTTCAGCAACGCACCAAGAA 58.901 45.000 0.00 0.00 0.00 2.52
3367 4259 5.359576 GGTCATAATTTGCACCCATGACTTA 59.640 40.000 20.53 0.00 43.16 2.24
3418 4361 9.506018 TTCAGTTATCTCAATCAATTGAAGTGA 57.494 29.630 13.09 16.76 45.26 3.41
3441 4384 8.223100 GTGACAAACTTAAATTTCCATCATTGC 58.777 33.333 0.00 0.00 0.00 3.56
3451 4394 6.855763 ATTTCCATCATTGCTCTTTAACCA 57.144 33.333 0.00 0.00 0.00 3.67
3455 4398 5.774690 TCCATCATTGCTCTTTAACCAAACT 59.225 36.000 0.00 0.00 0.00 2.66
3545 4489 3.756434 GCTTGCCCATTTCAGTGTACTAA 59.244 43.478 0.00 0.00 0.00 2.24
3549 4493 4.157656 TGCCCATTTCAGTGTACTAATTGC 59.842 41.667 0.00 0.00 0.00 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 6.128035 TGCGTTCATGCATAATAGTGTCTTTT 60.128 34.615 0.00 0.00 40.62 2.27
697 1023 5.942236 CCATTCTCAAATCTGAAGAACTCCA 59.058 40.000 0.00 0.00 0.00 3.86
837 1172 1.771073 GCGTTTTGCTTTTGTGGGCC 61.771 55.000 0.00 0.00 41.73 5.80
869 1204 1.132453 GGGCGCTTTGTCCTGTATTTC 59.868 52.381 7.64 0.00 40.15 2.17
876 1211 2.985847 GCTTGGGCGCTTTGTCCT 60.986 61.111 7.64 0.00 45.26 3.85
889 1224 3.677601 CTTGCATGTAGATTCACGCTTG 58.322 45.455 0.00 0.00 0.00 4.01
905 1240 0.737367 CCGTTCGATCTCTGCTTGCA 60.737 55.000 0.00 0.00 0.00 4.08
934 1269 3.775065 CTTCGCGAAGTCTCAGTCA 57.225 52.632 34.97 5.14 33.87 3.41
960 1295 2.352960 CGGAGCTGCTAAAAATCAGTCC 59.647 50.000 0.15 0.00 33.09 3.85
982 1317 9.553064 TTTTTATATTCGGCCGGTAACTATAAA 57.447 29.630 27.83 23.23 0.00 1.40
1006 1341 4.062991 ACGCGTCCTTTACTGATCTTTTT 58.937 39.130 5.58 0.00 0.00 1.94
1007 1342 3.660865 ACGCGTCCTTTACTGATCTTTT 58.339 40.909 5.58 0.00 0.00 2.27
1011 1346 2.474032 GCAAACGCGTCCTTTACTGATC 60.474 50.000 14.44 0.00 0.00 2.92
1012 1347 1.463444 GCAAACGCGTCCTTTACTGAT 59.537 47.619 14.44 0.00 0.00 2.90
1013 1348 0.863144 GCAAACGCGTCCTTTACTGA 59.137 50.000 14.44 0.00 0.00 3.41
1015 1350 1.145803 GAGCAAACGCGTCCTTTACT 58.854 50.000 14.44 2.86 0.00 2.24
1016 1351 0.165295 GGAGCAAACGCGTCCTTTAC 59.835 55.000 14.44 0.00 0.00 2.01
1017 1352 0.952010 GGGAGCAAACGCGTCCTTTA 60.952 55.000 14.44 0.00 31.31 1.85
1018 1353 2.258726 GGGAGCAAACGCGTCCTTT 61.259 57.895 14.44 0.00 31.31 3.11
1019 1354 2.668550 GGGAGCAAACGCGTCCTT 60.669 61.111 14.44 0.00 31.31 3.36
1022 1357 2.799540 GATCGGGAGCAAACGCGTC 61.800 63.158 14.44 0.00 44.35 5.19
1023 1358 2.813908 GATCGGGAGCAAACGCGT 60.814 61.111 5.58 5.58 44.35 6.01
1024 1359 3.913573 CGATCGGGAGCAAACGCG 61.914 66.667 7.38 3.53 45.12 6.01
1026 1361 1.927210 CATCGATCGGGAGCAAACG 59.073 57.895 16.41 0.00 0.00 3.60
1027 1362 1.643832 GCATCGATCGGGAGCAAAC 59.356 57.895 16.41 0.00 0.00 2.93
1028 1363 1.882625 CGCATCGATCGGGAGCAAA 60.883 57.895 16.41 0.00 0.00 3.68
1029 1364 2.279451 CGCATCGATCGGGAGCAA 60.279 61.111 16.41 0.00 0.00 3.91
1030 1365 4.950062 GCGCATCGATCGGGAGCA 62.950 66.667 23.32 4.03 0.00 4.26
1032 1367 1.154131 CTAGCGCATCGATCGGGAG 60.154 63.158 16.41 10.87 0.00 4.30
1033 1368 1.599797 TCTAGCGCATCGATCGGGA 60.600 57.895 16.41 0.00 0.00 5.14
1035 1370 0.727457 CTGTCTAGCGCATCGATCGG 60.727 60.000 16.41 0.48 0.00 4.18
1036 1371 0.727457 CCTGTCTAGCGCATCGATCG 60.727 60.000 11.47 9.36 0.00 3.69
1037 1372 0.593618 TCCTGTCTAGCGCATCGATC 59.406 55.000 11.47 0.00 0.00 3.69
1038 1373 0.595588 CTCCTGTCTAGCGCATCGAT 59.404 55.000 11.47 0.00 0.00 3.59
1039 1374 0.463833 TCTCCTGTCTAGCGCATCGA 60.464 55.000 11.47 0.00 0.00 3.59
1040 1375 0.382158 TTCTCCTGTCTAGCGCATCG 59.618 55.000 11.47 0.00 0.00 3.84
1041 1376 1.407258 AGTTCTCCTGTCTAGCGCATC 59.593 52.381 11.47 0.00 0.00 3.91
1042 1377 1.479709 AGTTCTCCTGTCTAGCGCAT 58.520 50.000 11.47 0.00 0.00 4.73
1043 1378 1.202582 GAAGTTCTCCTGTCTAGCGCA 59.797 52.381 11.47 0.00 0.00 6.09
1045 1380 1.795889 GCGAAGTTCTCCTGTCTAGCG 60.796 57.143 0.56 0.00 0.00 4.26
1046 1381 1.202582 TGCGAAGTTCTCCTGTCTAGC 59.797 52.381 0.56 0.00 0.00 3.42
1047 1382 3.246619 GTTGCGAAGTTCTCCTGTCTAG 58.753 50.000 0.56 0.00 0.00 2.43
1048 1383 2.626266 TGTTGCGAAGTTCTCCTGTCTA 59.374 45.455 0.56 0.00 0.00 2.59
1049 1384 1.412710 TGTTGCGAAGTTCTCCTGTCT 59.587 47.619 0.56 0.00 0.00 3.41
1051 1386 1.541233 CCTGTTGCGAAGTTCTCCTGT 60.541 52.381 0.56 0.00 0.00 4.00
1052 1387 1.151668 CCTGTTGCGAAGTTCTCCTG 58.848 55.000 0.56 0.00 0.00 3.86
1053 1388 0.759346 ACCTGTTGCGAAGTTCTCCT 59.241 50.000 0.56 0.00 0.00 3.69
1054 1389 2.450609 TACCTGTTGCGAAGTTCTCC 57.549 50.000 0.56 0.00 0.00 3.71
1056 1391 2.542595 CGTTTACCTGTTGCGAAGTTCT 59.457 45.455 0.56 0.00 0.00 3.01
1057 1392 2.286025 ACGTTTACCTGTTGCGAAGTTC 59.714 45.455 0.00 0.00 0.00 3.01
1060 1395 1.595794 ACACGTTTACCTGTTGCGAAG 59.404 47.619 0.00 0.00 0.00 3.79
1061 1396 1.654317 ACACGTTTACCTGTTGCGAA 58.346 45.000 0.00 0.00 0.00 4.70
1062 1397 1.654317 AACACGTTTACCTGTTGCGA 58.346 45.000 0.00 0.00 0.00 5.10
1063 1398 2.105659 CAAACACGTTTACCTGTTGCG 58.894 47.619 0.00 0.00 30.88 4.85
1065 1400 6.237701 CCAAAATCAAACACGTTTACCTGTTG 60.238 38.462 0.00 0.00 30.88 3.33
1066 1401 5.808030 CCAAAATCAAACACGTTTACCTGTT 59.192 36.000 0.00 0.00 31.76 3.16
1067 1402 5.105675 ACCAAAATCAAACACGTTTACCTGT 60.106 36.000 0.00 0.00 0.00 4.00
1068 1403 5.231147 CACCAAAATCAAACACGTTTACCTG 59.769 40.000 0.00 0.00 0.00 4.00
1070 1405 5.004916 CACACCAAAATCAAACACGTTTACC 59.995 40.000 0.00 0.00 0.00 2.85
1071 1406 5.800941 TCACACCAAAATCAAACACGTTTAC 59.199 36.000 0.00 0.00 0.00 2.01
1073 1408 4.810790 TCACACCAAAATCAAACACGTTT 58.189 34.783 0.00 0.00 0.00 3.60
1074 1409 4.156922 TCTCACACCAAAATCAAACACGTT 59.843 37.500 0.00 0.00 0.00 3.99
1075 1410 3.692101 TCTCACACCAAAATCAAACACGT 59.308 39.130 0.00 0.00 0.00 4.49
1078 1413 5.009911 CAGGATCTCACACCAAAATCAAACA 59.990 40.000 0.00 0.00 0.00 2.83
1080 1415 5.384336 TCAGGATCTCACACCAAAATCAAA 58.616 37.500 0.00 0.00 0.00 2.69
1081 1416 4.984295 TCAGGATCTCACACCAAAATCAA 58.016 39.130 0.00 0.00 0.00 2.57
1082 1417 4.639078 TCAGGATCTCACACCAAAATCA 57.361 40.909 0.00 0.00 0.00 2.57
1083 1418 4.272018 CGATCAGGATCTCACACCAAAATC 59.728 45.833 7.61 0.00 35.72 2.17
1084 1419 4.080919 TCGATCAGGATCTCACACCAAAAT 60.081 41.667 7.61 0.00 35.72 1.82
1085 1420 3.260632 TCGATCAGGATCTCACACCAAAA 59.739 43.478 7.61 0.00 35.72 2.44
1087 1422 2.456577 TCGATCAGGATCTCACACCAA 58.543 47.619 7.61 0.00 35.72 3.67
1088 1423 2.143876 TCGATCAGGATCTCACACCA 57.856 50.000 7.61 0.00 35.72 4.17
1089 1424 2.801342 GCTTCGATCAGGATCTCACACC 60.801 54.545 7.61 0.00 35.72 4.16
1090 1425 2.100584 AGCTTCGATCAGGATCTCACAC 59.899 50.000 7.61 0.00 35.72 3.82
1091 1426 2.382882 AGCTTCGATCAGGATCTCACA 58.617 47.619 7.61 0.00 35.72 3.58
1092 1427 4.576216 TTAGCTTCGATCAGGATCTCAC 57.424 45.455 7.61 0.00 35.72 3.51
1093 1428 5.127845 ACTTTTAGCTTCGATCAGGATCTCA 59.872 40.000 7.61 0.00 35.72 3.27
1095 1430 5.596845 GACTTTTAGCTTCGATCAGGATCT 58.403 41.667 7.61 0.00 35.72 2.75
1096 1431 4.442733 CGACTTTTAGCTTCGATCAGGATC 59.557 45.833 0.00 0.00 34.62 3.36
1098 1433 3.770666 CGACTTTTAGCTTCGATCAGGA 58.229 45.455 0.00 0.00 34.62 3.86
1099 1434 2.282820 GCGACTTTTAGCTTCGATCAGG 59.717 50.000 8.87 0.00 34.62 3.86
1100 1435 2.035342 CGCGACTTTTAGCTTCGATCAG 60.035 50.000 0.00 0.00 34.62 2.90
1101 1436 1.917955 CGCGACTTTTAGCTTCGATCA 59.082 47.619 0.00 0.00 34.62 2.92
1102 1437 2.182825 TCGCGACTTTTAGCTTCGATC 58.817 47.619 3.71 0.00 34.62 3.69
1103 1438 2.159421 TCTCGCGACTTTTAGCTTCGAT 60.159 45.455 3.71 0.00 34.62 3.59
1104 1439 1.198408 TCTCGCGACTTTTAGCTTCGA 59.802 47.619 3.71 0.00 34.62 3.71
1106 1441 4.327627 AGATTTCTCGCGACTTTTAGCTTC 59.672 41.667 3.71 0.00 0.00 3.86
1108 1443 3.851098 AGATTTCTCGCGACTTTTAGCT 58.149 40.909 3.71 0.00 0.00 3.32
1110 1445 5.115773 CCGATAGATTTCTCGCGACTTTTAG 59.884 44.000 3.71 0.00 39.76 1.85
1111 1446 4.974275 CCGATAGATTTCTCGCGACTTTTA 59.026 41.667 3.71 0.00 39.76 1.52
1112 1447 3.797256 CCGATAGATTTCTCGCGACTTTT 59.203 43.478 3.71 0.00 39.76 2.27
1113 1448 3.372954 CCGATAGATTTCTCGCGACTTT 58.627 45.455 3.71 0.00 39.76 2.66
1114 1449 2.859032 GCCGATAGATTTCTCGCGACTT 60.859 50.000 3.71 0.00 39.76 3.01
1116 1451 1.053811 GCCGATAGATTTCTCGCGAC 58.946 55.000 3.71 0.00 39.76 5.19
1117 1452 0.385598 CGCCGATAGATTTCTCGCGA 60.386 55.000 9.26 9.26 36.92 5.87
1118 1453 0.385598 TCGCCGATAGATTTCTCGCG 60.386 55.000 0.00 0.00 36.49 5.87
1120 1455 2.401017 TGTCGCCGATAGATTTCTCG 57.599 50.000 0.00 0.00 39.76 4.04
1124 1459 3.857052 TCTGTTTGTCGCCGATAGATTT 58.143 40.909 0.00 0.00 39.76 2.17
1125 1460 3.520290 TCTGTTTGTCGCCGATAGATT 57.480 42.857 0.00 0.00 39.76 2.40
1127 1462 2.425668 TCATCTGTTTGTCGCCGATAGA 59.574 45.455 0.00 0.00 39.76 1.98
1366 1731 3.471244 GAGGATGACGCCGACGAGG 62.471 68.421 0.00 0.00 43.93 4.63
1512 1883 1.372087 CCTGTCGGCAGCTTCAATCC 61.372 60.000 12.68 0.00 41.26 3.01
1787 2165 2.672996 ACATCCAACTGTGGCGGC 60.673 61.111 0.00 0.00 45.54 6.53
1862 2249 5.183713 TCTTCATTGTCATTCATGGTGTTCC 59.816 40.000 0.00 0.00 0.00 3.62
1878 2265 7.172703 TCAAGCACATATATCTGCTCTTCATTG 59.827 37.037 14.87 9.17 43.10 2.82
2037 2424 2.103094 CCATCCACCACTGATATCACGT 59.897 50.000 0.00 1.78 0.00 4.49
2149 2536 2.092968 AGACATAGCCGGCTTTCATTGA 60.093 45.455 37.74 15.94 0.00 2.57
2322 2718 1.640069 CTTGTCATCATCTGCGGCG 59.360 57.895 0.51 0.51 0.00 6.46
2406 2948 7.820044 ATCAATCGAAGTAGAAACAAGAGAC 57.180 36.000 0.00 0.00 0.00 3.36
2446 2988 3.613193 GCTTGATGAGCAATTTGCACAGA 60.613 43.478 22.61 11.80 46.30 3.41
2463 3005 1.130777 TCATGATCCGGATGGCTTGA 58.869 50.000 24.82 18.15 34.14 3.02
2471 3013 2.031870 CACTAGGTGTCATGATCCGGA 58.968 52.381 6.61 6.61 0.00 5.14
2472 3014 2.031870 TCACTAGGTGTCATGATCCGG 58.968 52.381 0.00 0.00 34.79 5.14
2486 3028 3.499563 CCTGATCTCCCCTAGGTCACTAG 60.500 56.522 8.29 0.00 40.56 2.57
2488 3030 1.219213 CCTGATCTCCCCTAGGTCACT 59.781 57.143 8.29 0.00 40.56 3.41
2492 3034 0.563672 GGACCTGATCTCCCCTAGGT 59.436 60.000 8.29 0.00 45.77 3.08
2502 3044 3.703001 TTTCAGAACAGGGACCTGATC 57.297 47.619 24.31 20.84 46.30 2.92
2503 3045 3.395941 AGTTTTCAGAACAGGGACCTGAT 59.604 43.478 24.31 13.19 46.30 2.90
2504 3046 2.777692 AGTTTTCAGAACAGGGACCTGA 59.222 45.455 24.31 0.00 46.30 3.86
2505 3047 4.036852 GAAAGTTTTCAGAACAGGGACCTG 59.963 45.833 16.55 16.55 41.78 4.00
2507 3049 3.951680 TGAAAGTTTTCAGAACAGGGACC 59.048 43.478 3.28 0.00 41.88 4.46
2568 3156 5.652994 AGTTAACTGAACAAAAGGTGCAA 57.347 34.783 7.48 0.00 40.86 4.08
2587 3186 2.956333 GGAAACTGGTTGGTGCTAAGTT 59.044 45.455 0.00 0.00 32.60 2.66
2592 3191 0.468029 CTGGGAAACTGGTTGGTGCT 60.468 55.000 0.00 0.00 0.00 4.40
2618 3217 6.664428 TTTTAAGGAAGGAAGTCCCAATTG 57.336 37.500 0.00 0.00 38.59 2.32
2624 3472 7.468141 ACATTCATTTTAAGGAAGGAAGTCC 57.532 36.000 8.28 0.00 34.57 3.85
2630 3478 6.096846 CAGGGGTACATTCATTTTAAGGAAGG 59.903 42.308 0.00 0.69 36.67 3.46
2641 3489 4.396357 TGGAAAACAGGGGTACATTCAT 57.604 40.909 0.00 0.00 0.00 2.57
2642 3490 3.885976 TGGAAAACAGGGGTACATTCA 57.114 42.857 0.00 0.00 0.00 2.57
2643 3491 5.738619 ATTTGGAAAACAGGGGTACATTC 57.261 39.130 0.00 0.00 0.00 2.67
2645 3493 7.806680 ATTAATTTGGAAAACAGGGGTACAT 57.193 32.000 0.00 0.00 0.00 2.29
2646 3494 7.619512 AATTAATTTGGAAAACAGGGGTACA 57.380 32.000 0.00 0.00 0.00 2.90
2647 3495 8.911918 AAAATTAATTTGGAAAACAGGGGTAC 57.088 30.769 14.04 0.00 0.00 3.34
2648 3496 8.939932 AGAAAATTAATTTGGAAAACAGGGGTA 58.060 29.630 14.04 0.00 0.00 3.69
2649 3497 7.811282 AGAAAATTAATTTGGAAAACAGGGGT 58.189 30.769 14.04 0.00 0.00 4.95
2663 3539 8.340618 TGCTGCTGAGTTCTAGAAAATTAATT 57.659 30.769 6.78 0.00 0.00 1.40
2668 3544 5.123502 CACATGCTGCTGAGTTCTAGAAAAT 59.876 40.000 6.78 0.00 0.00 1.82
2683 3559 5.352569 AGTCAGATACTTTTACACATGCTGC 59.647 40.000 0.00 0.00 33.35 5.25
2686 3562 7.133891 ACAAGTCAGATACTTTTACACATGC 57.866 36.000 0.00 0.00 46.61 4.06
2701 3578 3.118261 ACAGCTTCTGGAAACAAGTCAGA 60.118 43.478 0.00 0.00 42.06 3.27
2702 3579 3.209410 ACAGCTTCTGGAAACAAGTCAG 58.791 45.455 0.00 0.00 42.06 3.51
2706 3583 4.843220 ATCAACAGCTTCTGGAAACAAG 57.157 40.909 0.00 0.00 42.06 3.16
2730 3607 2.227388 CTGAGGCAAACCAGACACAATC 59.773 50.000 0.00 0.00 39.06 2.67
2748 3625 7.228108 GGATTAGCACTCAATCAAATCATCTGA 59.772 37.037 0.00 0.00 34.66 3.27
2763 3640 7.492344 CCCAATAAACAAAATGGATTAGCACTC 59.508 37.037 0.00 0.00 34.82 3.51
2802 3679 9.286170 AGTAGTTCCTTCTTAAACTTTTGATCC 57.714 33.333 0.00 0.00 37.02 3.36
2852 3729 0.672342 ATATCCGGCACACGTAGGAC 59.328 55.000 0.00 0.00 42.24 3.85
2853 3730 0.956633 GATATCCGGCACACGTAGGA 59.043 55.000 0.00 0.00 42.24 2.94
2854 3731 0.959553 AGATATCCGGCACACGTAGG 59.040 55.000 0.00 0.00 42.24 3.18
2855 3732 1.607148 TGAGATATCCGGCACACGTAG 59.393 52.381 0.00 0.00 42.24 3.51
2856 3733 1.682740 TGAGATATCCGGCACACGTA 58.317 50.000 0.00 0.00 42.24 3.57
2857 3734 0.821517 TTGAGATATCCGGCACACGT 59.178 50.000 0.00 0.00 42.24 4.49
2858 3735 1.067060 TCTTGAGATATCCGGCACACG 59.933 52.381 0.00 0.00 43.80 4.49
2859 3736 2.890808 TCTTGAGATATCCGGCACAC 57.109 50.000 0.00 0.00 0.00 3.82
2860 3737 2.029918 CGATCTTGAGATATCCGGCACA 60.030 50.000 0.00 0.00 34.37 4.57
2861 3738 2.600731 CGATCTTGAGATATCCGGCAC 58.399 52.381 0.00 0.00 34.37 5.01
2862 3739 1.546029 CCGATCTTGAGATATCCGGCA 59.454 52.381 0.00 0.00 34.30 5.69
2863 3740 2.285827 CCGATCTTGAGATATCCGGC 57.714 55.000 0.00 0.00 34.30 6.13
2864 3741 1.821753 AGCCGATCTTGAGATATCCGG 59.178 52.381 12.65 12.65 40.37 5.14
2865 3742 3.584406 AAGCCGATCTTGAGATATCCG 57.416 47.619 0.00 0.00 34.37 4.18
2866 3743 5.146010 AGAAAGCCGATCTTGAGATATCC 57.854 43.478 0.00 0.00 34.67 2.59
2867 3744 7.598278 TCTTAGAAAGCCGATCTTGAGATATC 58.402 38.462 0.00 0.00 34.67 1.63
2868 3745 7.309744 CCTCTTAGAAAGCCGATCTTGAGATAT 60.310 40.741 11.60 0.00 34.67 1.63
2869 3746 6.015856 CCTCTTAGAAAGCCGATCTTGAGATA 60.016 42.308 11.60 0.00 34.67 1.98
2870 3747 5.221422 CCTCTTAGAAAGCCGATCTTGAGAT 60.221 44.000 0.00 0.00 34.67 2.75
2871 3748 4.098654 CCTCTTAGAAAGCCGATCTTGAGA 59.901 45.833 11.60 6.21 34.67 3.27
2872 3749 4.367450 CCTCTTAGAAAGCCGATCTTGAG 58.633 47.826 0.00 0.00 34.67 3.02
2873 3750 3.133003 CCCTCTTAGAAAGCCGATCTTGA 59.867 47.826 0.00 0.00 34.67 3.02
2874 3751 3.462021 CCCTCTTAGAAAGCCGATCTTG 58.538 50.000 0.00 0.00 34.67 3.02
2875 3752 2.158885 GCCCTCTTAGAAAGCCGATCTT 60.159 50.000 0.00 0.00 36.34 2.40
2876 3753 1.414550 GCCCTCTTAGAAAGCCGATCT 59.585 52.381 0.00 0.00 0.00 2.75
2877 3754 1.414550 AGCCCTCTTAGAAAGCCGATC 59.585 52.381 0.28 0.00 0.00 3.69
2878 3755 1.501582 AGCCCTCTTAGAAAGCCGAT 58.498 50.000 0.28 0.00 0.00 4.18
2879 3756 1.755380 GTAGCCCTCTTAGAAAGCCGA 59.245 52.381 0.28 0.00 0.00 5.54
2880 3757 1.202545 GGTAGCCCTCTTAGAAAGCCG 60.203 57.143 0.28 0.00 0.00 5.52
2881 3758 2.120312 AGGTAGCCCTCTTAGAAAGCC 58.880 52.381 0.28 0.00 35.62 4.35
2892 3769 5.280011 CGATATAAAATGGTGAGGTAGCCCT 60.280 44.000 0.00 0.00 46.66 5.19
2893 3770 4.935808 CGATATAAAATGGTGAGGTAGCCC 59.064 45.833 0.00 0.00 0.00 5.19
2894 3771 5.548406 ACGATATAAAATGGTGAGGTAGCC 58.452 41.667 0.00 0.00 0.00 3.93
2895 3772 6.128902 CGAACGATATAAAATGGTGAGGTAGC 60.129 42.308 0.00 0.00 0.00 3.58
2896 3773 6.365247 CCGAACGATATAAAATGGTGAGGTAG 59.635 42.308 0.00 0.00 0.00 3.18
2897 3774 6.218019 CCGAACGATATAAAATGGTGAGGTA 58.782 40.000 0.00 0.00 0.00 3.08
2898 3775 5.054477 CCGAACGATATAAAATGGTGAGGT 58.946 41.667 0.00 0.00 0.00 3.85
2899 3776 4.084013 GCCGAACGATATAAAATGGTGAGG 60.084 45.833 0.00 0.00 0.00 3.86
2900 3777 4.084013 GGCCGAACGATATAAAATGGTGAG 60.084 45.833 0.00 0.00 0.00 3.51
2901 3778 3.810941 GGCCGAACGATATAAAATGGTGA 59.189 43.478 0.00 0.00 0.00 4.02
2902 3779 3.363575 CGGCCGAACGATATAAAATGGTG 60.364 47.826 24.07 0.00 35.47 4.17
2903 3780 2.803956 CGGCCGAACGATATAAAATGGT 59.196 45.455 24.07 0.00 35.47 3.55
2904 3781 2.803956 ACGGCCGAACGATATAAAATGG 59.196 45.455 35.90 0.00 37.61 3.16
2905 3782 3.246699 ACACGGCCGAACGATATAAAATG 59.753 43.478 35.90 17.19 37.61 2.32
2906 3783 3.460103 ACACGGCCGAACGATATAAAAT 58.540 40.909 35.90 0.00 37.61 1.82
2907 3784 2.891112 ACACGGCCGAACGATATAAAA 58.109 42.857 35.90 0.00 37.61 1.52
2908 3785 2.582728 ACACGGCCGAACGATATAAA 57.417 45.000 35.90 0.00 37.61 1.40
2909 3786 2.618241 AGTACACGGCCGAACGATATAA 59.382 45.455 35.90 3.03 37.61 0.98
2910 3787 2.221169 AGTACACGGCCGAACGATATA 58.779 47.619 35.90 9.74 37.61 0.86
2911 3788 1.027357 AGTACACGGCCGAACGATAT 58.973 50.000 35.90 3.57 37.61 1.63
2912 3789 1.662517 TAGTACACGGCCGAACGATA 58.337 50.000 35.90 15.76 37.61 2.92
2913 3790 1.027357 ATAGTACACGGCCGAACGAT 58.973 50.000 35.90 23.05 37.61 3.73
2914 3791 0.099259 CATAGTACACGGCCGAACGA 59.901 55.000 35.90 21.88 37.61 3.85
2915 3792 0.179156 ACATAGTACACGGCCGAACG 60.179 55.000 35.90 21.75 40.31 3.95
2916 3793 1.922545 GAACATAGTACACGGCCGAAC 59.077 52.381 35.90 25.10 0.00 3.95
2917 3794 1.467883 CGAACATAGTACACGGCCGAA 60.468 52.381 35.90 14.32 0.00 4.30
2918 3795 0.099259 CGAACATAGTACACGGCCGA 59.901 55.000 35.90 8.69 0.00 5.54
2919 3796 0.868602 CCGAACATAGTACACGGCCG 60.869 60.000 26.86 26.86 37.32 6.13
2920 3797 0.457035 TCCGAACATAGTACACGGCC 59.543 55.000 0.00 0.00 42.73 6.13
2921 3798 2.124903 CATCCGAACATAGTACACGGC 58.875 52.381 0.00 0.00 42.73 5.68
2922 3799 3.431922 ACATCCGAACATAGTACACGG 57.568 47.619 0.00 0.00 44.09 4.94
2923 3800 3.000078 GCAACATCCGAACATAGTACACG 60.000 47.826 0.00 0.00 0.00 4.49
2924 3801 4.181578 AGCAACATCCGAACATAGTACAC 58.818 43.478 0.00 0.00 0.00 2.90
2925 3802 4.465632 AGCAACATCCGAACATAGTACA 57.534 40.909 0.00 0.00 0.00 2.90
2926 3803 5.796350 AAAGCAACATCCGAACATAGTAC 57.204 39.130 0.00 0.00 0.00 2.73
2927 3804 8.500753 AAATAAAGCAACATCCGAACATAGTA 57.499 30.769 0.00 0.00 0.00 1.82
2928 3805 7.336931 AGAAATAAAGCAACATCCGAACATAGT 59.663 33.333 0.00 0.00 0.00 2.12
2929 3806 7.697691 AGAAATAAAGCAACATCCGAACATAG 58.302 34.615 0.00 0.00 0.00 2.23
2930 3807 7.624360 AGAAATAAAGCAACATCCGAACATA 57.376 32.000 0.00 0.00 0.00 2.29
2931 3808 6.515272 AGAAATAAAGCAACATCCGAACAT 57.485 33.333 0.00 0.00 0.00 2.71
2932 3809 5.957842 AGAAATAAAGCAACATCCGAACA 57.042 34.783 0.00 0.00 0.00 3.18
2933 3810 8.021396 ACTTTAGAAATAAAGCAACATCCGAAC 58.979 33.333 7.49 0.00 39.88 3.95
2934 3811 8.020819 CACTTTAGAAATAAAGCAACATCCGAA 58.979 33.333 7.49 0.00 39.88 4.30
2935 3812 7.361713 CCACTTTAGAAATAAAGCAACATCCGA 60.362 37.037 7.49 0.00 39.88 4.55
2936 3813 6.747280 CCACTTTAGAAATAAAGCAACATCCG 59.253 38.462 7.49 0.00 39.88 4.18
2937 3814 7.035612 CCCACTTTAGAAATAAAGCAACATCC 58.964 38.462 7.49 0.00 39.88 3.51
2938 3815 7.035612 CCCCACTTTAGAAATAAAGCAACATC 58.964 38.462 7.49 0.00 39.88 3.06
2939 3816 6.574269 GCCCCACTTTAGAAATAAAGCAACAT 60.574 38.462 7.49 0.00 39.88 2.71
2940 3817 5.279256 GCCCCACTTTAGAAATAAAGCAACA 60.279 40.000 7.49 0.00 39.88 3.33
2941 3818 5.168569 GCCCCACTTTAGAAATAAAGCAAC 58.831 41.667 7.49 0.00 39.88 4.17
2942 3819 4.082463 CGCCCCACTTTAGAAATAAAGCAA 60.082 41.667 7.49 0.00 39.88 3.91
2943 3820 3.442273 CGCCCCACTTTAGAAATAAAGCA 59.558 43.478 7.49 0.00 39.88 3.91
2944 3821 3.692593 TCGCCCCACTTTAGAAATAAAGC 59.307 43.478 7.49 0.00 39.88 3.51
2945 3822 5.890424 TTCGCCCCACTTTAGAAATAAAG 57.110 39.130 6.28 6.28 41.49 1.85
2946 3823 5.336134 GCTTTCGCCCCACTTTAGAAATAAA 60.336 40.000 0.00 0.00 31.55 1.40
2947 3824 4.157105 GCTTTCGCCCCACTTTAGAAATAA 59.843 41.667 0.00 0.00 31.55 1.40
2948 3825 3.692593 GCTTTCGCCCCACTTTAGAAATA 59.307 43.478 0.00 0.00 31.55 1.40
2949 3826 2.492088 GCTTTCGCCCCACTTTAGAAAT 59.508 45.455 0.00 0.00 31.55 2.17
2950 3827 1.883926 GCTTTCGCCCCACTTTAGAAA 59.116 47.619 0.00 0.00 0.00 2.52
2951 3828 1.530323 GCTTTCGCCCCACTTTAGAA 58.470 50.000 0.00 0.00 0.00 2.10
2952 3829 3.243128 GCTTTCGCCCCACTTTAGA 57.757 52.632 0.00 0.00 0.00 2.10
2965 3842 2.872858 ACAACTCTCGAAACAGGCTTTC 59.127 45.455 0.00 0.00 0.00 2.62
2966 3843 2.919228 ACAACTCTCGAAACAGGCTTT 58.081 42.857 0.00 0.00 0.00 3.51
2967 3844 2.622064 ACAACTCTCGAAACAGGCTT 57.378 45.000 0.00 0.00 0.00 4.35
2968 3845 2.622064 AACAACTCTCGAAACAGGCT 57.378 45.000 0.00 0.00 0.00 4.58
2969 3846 5.358298 AATAAACAACTCTCGAAACAGGC 57.642 39.130 0.00 0.00 0.00 4.85
2970 3847 8.009974 CACTAAATAAACAACTCTCGAAACAGG 58.990 37.037 0.00 0.00 0.00 4.00
2971 3848 8.761497 TCACTAAATAAACAACTCTCGAAACAG 58.239 33.333 0.00 0.00 0.00 3.16
2972 3849 8.651391 TCACTAAATAAACAACTCTCGAAACA 57.349 30.769 0.00 0.00 0.00 2.83
2973 3850 9.530129 CATCACTAAATAAACAACTCTCGAAAC 57.470 33.333 0.00 0.00 0.00 2.78
2974 3851 9.483916 TCATCACTAAATAAACAACTCTCGAAA 57.516 29.630 0.00 0.00 0.00 3.46
2975 3852 9.483916 TTCATCACTAAATAAACAACTCTCGAA 57.516 29.630 0.00 0.00 0.00 3.71
2976 3853 9.653287 ATTCATCACTAAATAAACAACTCTCGA 57.347 29.630 0.00 0.00 0.00 4.04
3004 3881 9.822185 GATAGGTTTGCAATATTTCAGGAAAAT 57.178 29.630 0.00 0.00 40.67 1.82
3012 3889 8.844244 ACTCTCATGATAGGTTTGCAATATTTC 58.156 33.333 12.29 0.00 0.00 2.17
3014 3891 7.994911 TGACTCTCATGATAGGTTTGCAATATT 59.005 33.333 12.29 0.00 0.00 1.28
3026 3903 5.561919 GCGGTAAGTCTGACTCTCATGATAG 60.562 48.000 11.31 6.56 0.00 2.08
3039 3916 0.388649 ACTCGCAAGCGGTAAGTCTG 60.389 55.000 14.98 0.00 40.25 3.51
3041 3918 1.266466 GTACTCGCAAGCGGTAAGTC 58.734 55.000 14.98 2.45 40.25 3.01
3042 3919 0.599558 TGTACTCGCAAGCGGTAAGT 59.400 50.000 14.98 12.80 40.25 2.24
3043 3920 1.654105 CTTGTACTCGCAAGCGGTAAG 59.346 52.381 14.98 7.32 39.26 2.34
3044 3921 1.705256 CTTGTACTCGCAAGCGGTAA 58.295 50.000 14.98 3.50 39.26 2.85
3045 3922 3.411808 CTTGTACTCGCAAGCGGTA 57.588 52.632 14.98 12.22 39.26 4.02
3046 3923 4.261888 CTTGTACTCGCAAGCGGT 57.738 55.556 14.98 13.18 39.26 5.68
3053 3930 1.993370 CCTTAGCACACTTGTACTCGC 59.007 52.381 0.00 0.00 0.00 5.03
3055 3932 3.955650 TCCCTTAGCACACTTGTACTC 57.044 47.619 0.00 0.00 0.00 2.59
3073 3950 9.710900 AACCATTTCAAGAAGTAATTGATTTCC 57.289 29.630 0.00 0.00 36.60 3.13
3078 3955 7.521423 CGTGGAACCATTTCAAGAAGTAATTGA 60.521 37.037 0.00 0.00 34.93 2.57
3080 3957 6.264518 ACGTGGAACCATTTCAAGAAGTAATT 59.735 34.615 0.00 0.00 32.80 1.40
3157 4036 8.968969 AGGAGTAGTGATCTAAAACGTTCTTAT 58.031 33.333 0.00 0.00 0.00 1.73
3158 4037 8.345724 AGGAGTAGTGATCTAAAACGTTCTTA 57.654 34.615 0.00 2.24 0.00 2.10
3159 4038 7.229581 AGGAGTAGTGATCTAAAACGTTCTT 57.770 36.000 0.00 1.04 0.00 2.52
3160 4039 6.837471 AGGAGTAGTGATCTAAAACGTTCT 57.163 37.500 0.00 0.00 0.00 3.01
3161 4040 7.760437 ACTAGGAGTAGTGATCTAAAACGTTC 58.240 38.462 0.00 0.00 38.14 3.95
3162 4041 7.700022 ACTAGGAGTAGTGATCTAAAACGTT 57.300 36.000 0.00 0.00 38.14 3.99
3175 4054 7.294584 AGAGCATTTAGATCACTAGGAGTAGT 58.705 38.462 0.00 0.00 40.38 2.73
3176 4055 7.759489 AGAGCATTTAGATCACTAGGAGTAG 57.241 40.000 0.00 0.00 34.30 2.57
3177 4056 9.815306 ATAAGAGCATTTAGATCACTAGGAGTA 57.185 33.333 0.00 0.00 34.30 2.59
3178 4057 8.719645 ATAAGAGCATTTAGATCACTAGGAGT 57.280 34.615 0.00 0.00 34.30 3.85
3193 4072 9.061435 GCCTCTGTAAAGAAATATAAGAGCATT 57.939 33.333 0.00 0.00 0.00 3.56
3194 4073 7.386299 CGCCTCTGTAAAGAAATATAAGAGCAT 59.614 37.037 0.00 0.00 0.00 3.79
3195 4074 6.701841 CGCCTCTGTAAAGAAATATAAGAGCA 59.298 38.462 0.00 0.00 0.00 4.26
3196 4075 6.146347 CCGCCTCTGTAAAGAAATATAAGAGC 59.854 42.308 0.00 0.00 0.00 4.09
3197 4076 7.210873 ACCGCCTCTGTAAAGAAATATAAGAG 58.789 38.462 0.00 0.00 0.00 2.85
3198 4077 7.120923 ACCGCCTCTGTAAAGAAATATAAGA 57.879 36.000 0.00 0.00 0.00 2.10
3199 4078 9.490379 AATACCGCCTCTGTAAAGAAATATAAG 57.510 33.333 0.00 0.00 0.00 1.73
3200 4079 9.841295 AAATACCGCCTCTGTAAAGAAATATAA 57.159 29.630 0.00 0.00 0.00 0.98
3201 4080 9.841295 AAAATACCGCCTCTGTAAAGAAATATA 57.159 29.630 0.00 0.00 0.00 0.86
3202 4081 8.747538 AAAATACCGCCTCTGTAAAGAAATAT 57.252 30.769 0.00 0.00 0.00 1.28
3203 4082 8.570068 AAAAATACCGCCTCTGTAAAGAAATA 57.430 30.769 0.00 0.00 0.00 1.40
3204 4083 7.393515 AGAAAAATACCGCCTCTGTAAAGAAAT 59.606 33.333 0.00 0.00 0.00 2.17
3205 4084 6.713450 AGAAAAATACCGCCTCTGTAAAGAAA 59.287 34.615 0.00 0.00 0.00 2.52
3206 4085 6.235664 AGAAAAATACCGCCTCTGTAAAGAA 58.764 36.000 0.00 0.00 0.00 2.52
3207 4086 5.801380 AGAAAAATACCGCCTCTGTAAAGA 58.199 37.500 0.00 0.00 0.00 2.52
3208 4087 6.496338 AAGAAAAATACCGCCTCTGTAAAG 57.504 37.500 0.00 0.00 0.00 1.85
3209 4088 6.887626 AAAGAAAAATACCGCCTCTGTAAA 57.112 33.333 0.00 0.00 0.00 2.01
3210 4089 6.263617 ACAAAAGAAAAATACCGCCTCTGTAA 59.736 34.615 0.00 0.00 0.00 2.41
3211 4090 5.766174 ACAAAAGAAAAATACCGCCTCTGTA 59.234 36.000 0.00 0.00 0.00 2.74
3212 4091 4.583073 ACAAAAGAAAAATACCGCCTCTGT 59.417 37.500 0.00 0.00 0.00 3.41
3213 4092 4.917415 CACAAAAGAAAAATACCGCCTCTG 59.083 41.667 0.00 0.00 0.00 3.35
3214 4093 4.825085 TCACAAAAGAAAAATACCGCCTCT 59.175 37.500 0.00 0.00 0.00 3.69
3215 4094 4.915667 GTCACAAAAGAAAAATACCGCCTC 59.084 41.667 0.00 0.00 0.00 4.70
3216 4095 4.583073 AGTCACAAAAGAAAAATACCGCCT 59.417 37.500 0.00 0.00 0.00 5.52
3217 4096 4.866921 AGTCACAAAAGAAAAATACCGCC 58.133 39.130 0.00 0.00 0.00 6.13
3218 4097 5.974751 TCAAGTCACAAAAGAAAAATACCGC 59.025 36.000 0.00 0.00 0.00 5.68
3219 4098 7.376072 GTCTCAAGTCACAAAAGAAAAATACCG 59.624 37.037 0.00 0.00 0.00 4.02
3220 4099 8.406297 AGTCTCAAGTCACAAAAGAAAAATACC 58.594 33.333 0.00 0.00 0.00 2.73
3221 4100 9.788960 AAGTCTCAAGTCACAAAAGAAAAATAC 57.211 29.630 0.00 0.00 0.00 1.89
3223 4102 8.522830 TGAAGTCTCAAGTCACAAAAGAAAAAT 58.477 29.630 0.00 0.00 0.00 1.82
3224 4103 7.807907 GTGAAGTCTCAAGTCACAAAAGAAAAA 59.192 33.333 0.00 0.00 41.09 1.94
3225 4104 7.174946 AGTGAAGTCTCAAGTCACAAAAGAAAA 59.825 33.333 5.88 0.00 43.34 2.29
3236 4115 5.639931 GGACCATAAAGTGAAGTCTCAAGTC 59.360 44.000 0.00 0.00 31.88 3.01
3238 4117 4.627467 CGGACCATAAAGTGAAGTCTCAAG 59.373 45.833 0.00 0.00 31.88 3.02
3260 4139 3.374367 TCAGCTGCTAACTACAGTCTACG 59.626 47.826 9.47 0.00 37.47 3.51
3293 4172 8.516234 ACCAACTGAACGTAAAATGCATTTATA 58.484 29.630 24.35 15.28 35.98 0.98
3305 4184 3.690139 TGCTGAAAACCAACTGAACGTAA 59.310 39.130 0.00 0.00 0.00 3.18
3306 4185 3.271729 TGCTGAAAACCAACTGAACGTA 58.728 40.909 0.00 0.00 0.00 3.57
3307 4186 2.088423 TGCTGAAAACCAACTGAACGT 58.912 42.857 0.00 0.00 0.00 3.99
3308 4187 2.842208 TGCTGAAAACCAACTGAACG 57.158 45.000 0.00 0.00 0.00 3.95
3338 4224 3.843027 TGGGTGCAAATTATGACCCAATT 59.157 39.130 15.71 0.00 46.95 2.32
3339 4225 3.448934 TGGGTGCAAATTATGACCCAAT 58.551 40.909 15.71 0.00 46.95 3.16
3410 4353 9.528018 GATGGAAATTTAAGTTTGTCACTTCAA 57.472 29.630 0.06 0.00 42.62 2.69
3415 4358 8.223100 GCAATGATGGAAATTTAAGTTTGTCAC 58.777 33.333 0.06 0.00 0.00 3.67
3418 4361 8.370182 AGAGCAATGATGGAAATTTAAGTTTGT 58.630 29.630 0.06 0.00 0.00 2.83
3429 4372 6.662865 TTGGTTAAAGAGCAATGATGGAAA 57.337 33.333 0.00 0.00 40.60 3.13
3469 4412 8.844244 GCATTCCAAAGTATTGAATACTCAGAT 58.156 33.333 17.37 0.17 44.94 2.90
3480 4424 7.923878 TCATGATTCATGCATTCCAAAGTATTG 59.076 33.333 19.74 0.00 41.18 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.