Multiple sequence alignment - TraesCS1A01G342800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G342800 chr1A 100.000 2405 0 0 1 2405 531644592 531646996 0.000000e+00 4442.0
1 TraesCS1A01G342800 chr1A 91.206 398 30 4 2012 2405 520359215 520359611 9.780000e-149 536.0
2 TraesCS1A01G342800 chr1D 87.370 958 55 23 468 1391 433257576 433258501 0.000000e+00 1038.0
3 TraesCS1A01G342800 chr1D 92.519 401 26 4 2008 2405 411727795 411727396 2.680000e-159 571.0
4 TraesCS1A01G342800 chr1D 85.629 501 63 7 1393 1887 433259525 433260022 3.540000e-143 518.0
5 TraesCS1A01G342800 chr1D 91.200 125 4 4 1 118 433254179 433254303 1.910000e-36 163.0
6 TraesCS1A01G342800 chr1D 92.308 52 4 0 452 503 433257590 433257641 9.220000e-10 75.0
7 TraesCS1A01G342800 chr1B 87.933 779 34 25 640 1391 585203038 585203783 0.000000e+00 863.0
8 TraesCS1A01G342800 chr1B 85.213 399 45 10 2013 2405 94601060 94600670 4.820000e-107 398.0
9 TraesCS1A01G342800 chr1B 86.175 217 29 1 2013 2228 94622399 94622183 1.440000e-57 233.0
10 TraesCS1A01G342800 chr1B 89.256 121 5 3 1 114 585167494 585167613 6.930000e-31 145.0
11 TraesCS1A01G342800 chr1B 91.139 79 3 1 549 627 585169237 585169311 1.180000e-18 104.0
12 TraesCS1A01G342800 chr1B 87.692 65 8 0 1949 2013 580529859 580529795 2.560000e-10 76.8
13 TraesCS1A01G342800 chr1B 94.872 39 2 0 2023 2061 125767203 125767241 7.180000e-06 62.1
14 TraesCS1A01G342800 chr3D 90.773 401 29 6 2010 2405 526052900 526053297 1.640000e-146 529.0
15 TraesCS1A01G342800 chr6D 91.321 265 20 3 2144 2405 343127767 343128031 2.270000e-95 359.0
16 TraesCS1A01G342800 chr7B 81.658 398 45 7 2012 2405 617485337 617484964 3.000000e-79 305.0
17 TraesCS1A01G342800 chr6A 92.366 131 7 1 2278 2405 570916012 570915882 1.470000e-42 183.0
18 TraesCS1A01G342800 chr2A 88.889 108 8 2 2297 2404 137282985 137282882 1.940000e-26 130.0
19 TraesCS1A01G342800 chr2A 94.872 39 2 0 2023 2061 660969725 660969687 7.180000e-06 62.1
20 TraesCS1A01G342800 chr2D 92.857 42 3 0 2023 2064 36151826 36151785 7.180000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G342800 chr1A 531644592 531646996 2404 False 4442.0 4442 100.00000 1 2405 1 chr1A.!!$F2 2404
1 TraesCS1A01G342800 chr1D 433254179 433260022 5843 False 448.5 1038 89.12675 1 1887 4 chr1D.!!$F1 1886
2 TraesCS1A01G342800 chr1B 585203038 585203783 745 False 863.0 863 87.93300 640 1391 1 chr1B.!!$F2 751


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
165 215 0.034059 AGAGCAACTCCACAAGGTCG 59.966 55.0 0.0 0.0 35.89 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2055 6078 0.035458 GAGAGAAGTGGGTGGTGTGG 59.965 60.0 0.0 0.0 0.0 4.17 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 82 1.927174 CTCCGGAGCGTGAACTTTATG 59.073 52.381 20.67 0.00 0.00 1.90
79 83 1.274167 TCCGGAGCGTGAACTTTATGT 59.726 47.619 0.00 0.00 0.00 2.29
101 108 3.628008 AGTACATGTGAGTACCATCCGA 58.372 45.455 9.11 0.00 44.19 4.55
117 166 3.386237 GAGTCCCGGAGCTGCAGT 61.386 66.667 16.64 1.59 0.00 4.40
127 176 1.198637 GGAGCTGCAGTGTGATTGTTC 59.801 52.381 16.64 0.00 0.00 3.18
143 193 8.711457 TGTGATTGTTCAGATTATATACATGCG 58.289 33.333 0.00 0.00 30.85 4.73
158 208 3.210857 TGCGTAAGAGCAACTCCAC 57.789 52.632 0.00 0.00 45.06 4.02
159 209 0.391228 TGCGTAAGAGCAACTCCACA 59.609 50.000 0.00 0.00 45.06 4.17
163 213 2.548067 CGTAAGAGCAACTCCACAAGGT 60.548 50.000 0.00 0.00 43.02 3.50
164 214 2.262423 AAGAGCAACTCCACAAGGTC 57.738 50.000 0.00 0.00 35.89 3.85
165 215 0.034059 AGAGCAACTCCACAAGGTCG 59.966 55.000 0.00 0.00 35.89 4.79
166 216 1.569479 GAGCAACTCCACAAGGTCGC 61.569 60.000 0.00 0.00 35.89 5.19
167 217 1.598130 GCAACTCCACAAGGTCGCT 60.598 57.895 0.00 0.00 35.89 4.93
177 233 0.603569 CAAGGTCGCTATATCGGGCT 59.396 55.000 0.00 0.00 0.00 5.19
180 236 2.736347 AGGTCGCTATATCGGGCTAAT 58.264 47.619 0.00 0.00 0.00 1.73
203 259 2.287368 GGCATAATAACCGCCGAAAAGG 60.287 50.000 0.00 0.00 44.97 3.11
204 260 2.614983 GCATAATAACCGCCGAAAAGGA 59.385 45.455 0.00 0.00 45.00 3.36
205 261 3.547413 GCATAATAACCGCCGAAAAGGAC 60.547 47.826 0.00 0.00 45.00 3.85
206 262 2.188062 AATAACCGCCGAAAAGGACA 57.812 45.000 0.00 0.00 45.00 4.02
207 263 1.445871 ATAACCGCCGAAAAGGACAC 58.554 50.000 0.00 0.00 45.00 3.67
208 264 0.393820 TAACCGCCGAAAAGGACACT 59.606 50.000 0.00 0.00 45.00 3.55
209 265 0.883370 AACCGCCGAAAAGGACACTC 60.883 55.000 0.00 0.00 45.00 3.51
210 266 1.004918 CCGCCGAAAAGGACACTCT 60.005 57.895 0.00 0.00 45.00 3.24
211 267 0.245539 CCGCCGAAAAGGACACTCTA 59.754 55.000 0.00 0.00 45.00 2.43
212 268 1.630148 CGCCGAAAAGGACACTCTAG 58.370 55.000 0.00 0.00 45.00 2.43
213 269 1.360820 GCCGAAAAGGACACTCTAGC 58.639 55.000 0.00 0.00 45.00 3.42
217 273 2.353208 CGAAAAGGACACTCTAGCAGCT 60.353 50.000 0.00 0.00 0.00 4.24
218 274 3.119459 CGAAAAGGACACTCTAGCAGCTA 60.119 47.826 1.13 1.13 0.00 3.32
219 275 4.440802 CGAAAAGGACACTCTAGCAGCTAT 60.441 45.833 1.54 0.00 0.00 2.97
260 329 0.389757 GAGGGCCTCCGTATTCAGTC 59.610 60.000 23.49 0.00 38.33 3.51
262 331 1.335132 GGGCCTCCGTATTCAGTCCA 61.335 60.000 0.84 0.00 0.00 4.02
268 337 1.066430 TCCGTATTCAGTCCACAAGCC 60.066 52.381 0.00 0.00 0.00 4.35
304 373 0.482887 AGGGGAAGTTGGTTTGGAGG 59.517 55.000 0.00 0.00 0.00 4.30
305 374 0.481128 GGGGAAGTTGGTTTGGAGGA 59.519 55.000 0.00 0.00 0.00 3.71
310 379 0.110486 AGTTGGTTTGGAGGATGCGT 59.890 50.000 0.00 0.00 0.00 5.24
322 391 1.139058 AGGATGCGTCATCTACCAACC 59.861 52.381 8.47 2.89 40.39 3.77
332 401 0.244450 TCTACCAACCGCTTACGTGG 59.756 55.000 0.00 0.00 46.44 4.94
339 408 2.652095 CCGCTTACGTGGGAGGGAA 61.652 63.158 0.00 0.00 37.15 3.97
346 415 0.108019 ACGTGGGAGGGAAGTTTCAC 59.892 55.000 0.00 0.00 0.00 3.18
353 422 2.992593 GAGGGAAGTTTCACCTCCATC 58.007 52.381 13.86 0.98 43.93 3.51
354 423 2.305927 GAGGGAAGTTTCACCTCCATCA 59.694 50.000 13.86 0.00 43.93 3.07
394 463 1.956869 TCTCCTCTTCCAGCCAATGA 58.043 50.000 0.00 0.00 0.00 2.57
435 504 4.037927 TGGGAAGCCTGTTAGCTAATAGT 58.962 43.478 23.70 9.80 44.11 2.12
441 510 4.082136 AGCCTGTTAGCTAATAGTATCCGC 60.082 45.833 23.70 19.43 42.70 5.54
458 527 3.423154 CCGCGTGCCAACTTCCTC 61.423 66.667 4.92 0.00 0.00 3.71
459 528 2.664851 CGCGTGCCAACTTCCTCA 60.665 61.111 0.00 0.00 0.00 3.86
461 530 2.617274 GCGTGCCAACTTCCTCACC 61.617 63.158 0.00 0.00 0.00 4.02
462 531 1.227823 CGTGCCAACTTCCTCACCA 60.228 57.895 0.00 0.00 0.00 4.17
464 533 1.150536 TGCCAACTTCCTCACCACC 59.849 57.895 0.00 0.00 0.00 4.61
465 534 1.150536 GCCAACTTCCTCACCACCA 59.849 57.895 0.00 0.00 0.00 4.17
466 535 1.172812 GCCAACTTCCTCACCACCAC 61.173 60.000 0.00 0.00 0.00 4.16
467 536 0.537371 CCAACTTCCTCACCACCACC 60.537 60.000 0.00 0.00 0.00 4.61
468 537 0.884704 CAACTTCCTCACCACCACCG 60.885 60.000 0.00 0.00 0.00 4.94
469 538 2.358737 CTTCCTCACCACCACCGC 60.359 66.667 0.00 0.00 0.00 5.68
470 539 3.901797 CTTCCTCACCACCACCGCC 62.902 68.421 0.00 0.00 0.00 6.13
473 542 4.033776 CTCACCACCACCGCCCAT 62.034 66.667 0.00 0.00 0.00 4.00
474 543 2.608059 TCACCACCACCGCCCATA 60.608 61.111 0.00 0.00 0.00 2.74
475 544 2.124736 CACCACCACCGCCCATAG 60.125 66.667 0.00 0.00 0.00 2.23
493 3424 0.398318 AGCCTCCACTTTCTCACCAC 59.602 55.000 0.00 0.00 0.00 4.16
517 3448 1.270358 CGCCCATAGCCTCTACTTTCC 60.270 57.143 0.00 0.00 38.78 3.13
518 3449 2.050918 GCCCATAGCCTCTACTTTCCT 58.949 52.381 0.00 0.00 34.35 3.36
526 3459 0.179134 CTCTACTTTCCTCACCGCCG 60.179 60.000 0.00 0.00 0.00 6.46
541 3474 0.596600 CGCCGCCGACAATATACACT 60.597 55.000 0.00 0.00 36.29 3.55
544 3477 2.866460 GCCGCCGACAATATACACTGAT 60.866 50.000 0.00 0.00 0.00 2.90
550 3483 6.192360 GCCGACAATATACACTGATGTTTTC 58.808 40.000 0.00 0.00 40.48 2.29
566 3499 4.758251 TCGGTGGACATGGCAGCG 62.758 66.667 13.99 13.99 40.59 5.18
604 3537 2.631062 AGGTCGATGTTGTTGGTCAGTA 59.369 45.455 0.00 0.00 0.00 2.74
714 3664 9.379791 TCGAAAAGAATAAGGTTAGAAAGATCC 57.620 33.333 0.00 0.00 0.00 3.36
718 3668 7.196637 AGAATAAGGTTAGAAAGATCCGGTT 57.803 36.000 0.00 0.00 0.00 4.44
719 3669 8.315220 AGAATAAGGTTAGAAAGATCCGGTTA 57.685 34.615 0.00 0.00 0.00 2.85
721 3671 7.909485 ATAAGGTTAGAAAGATCCGGTTAGA 57.091 36.000 0.00 0.00 0.00 2.10
722 3672 6.616237 AAGGTTAGAAAGATCCGGTTAGAA 57.384 37.500 0.00 0.00 0.00 2.10
723 3673 6.616237 AGGTTAGAAAGATCCGGTTAGAAA 57.384 37.500 0.00 0.00 0.00 2.52
724 3674 6.641474 AGGTTAGAAAGATCCGGTTAGAAAG 58.359 40.000 0.00 0.00 0.00 2.62
725 3675 6.439692 AGGTTAGAAAGATCCGGTTAGAAAGA 59.560 38.462 0.00 0.00 0.00 2.52
764 3718 3.486383 TGGAATTTTGAGAGCCGTCTTT 58.514 40.909 0.00 0.00 30.97 2.52
830 3805 2.416547 GTGCTGTACGTCGGACTACTTA 59.583 50.000 9.44 0.00 0.00 2.24
854 3829 2.073056 TGCCTATATAACGCATTGCCG 58.927 47.619 2.41 1.05 0.00 5.69
897 3873 3.744238 AATTAACCTGGTGCACAAACC 57.256 42.857 20.43 0.83 40.94 3.27
970 3956 0.944311 CACGTAACGAGCCAGCAGTT 60.944 55.000 8.23 8.23 0.00 3.16
971 3957 0.249741 ACGTAACGAGCCAGCAGTTT 60.250 50.000 8.42 0.00 0.00 2.66
973 3959 1.508632 GTAACGAGCCAGCAGTTTGA 58.491 50.000 8.42 0.00 0.00 2.69
974 3960 1.194772 GTAACGAGCCAGCAGTTTGAC 59.805 52.381 8.42 0.36 0.00 3.18
975 3961 1.498865 AACGAGCCAGCAGTTTGACG 61.499 55.000 0.00 0.00 0.00 4.35
976 3962 2.671177 CGAGCCAGCAGTTTGACGG 61.671 63.158 0.00 0.00 0.00 4.79
1005 3991 1.667510 GGGTTTTGTTGCCATGGCG 60.668 57.895 30.87 0.00 45.51 5.69
1152 4138 0.522626 TGATCAACTACGCGTCGGAA 59.477 50.000 18.63 0.00 0.00 4.30
1347 4342 1.376812 GCTCAACCCCAAGTACCCG 60.377 63.158 0.00 0.00 0.00 5.28
1391 4386 0.731514 GACTTCGACGCCATGTTCGA 60.732 55.000 10.92 8.95 0.00 3.71
1400 5417 3.758300 ACGCCATGTTCGAATTCAATTC 58.242 40.909 0.00 0.00 35.94 2.17
1404 5421 5.448496 CGCCATGTTCGAATTCAATTCCTAA 60.448 40.000 0.00 0.00 35.89 2.69
1408 5425 9.369904 CCATGTTCGAATTCAATTCCTAAAATT 57.630 29.630 0.00 0.00 35.89 1.82
1414 5431 9.567848 TCGAATTCAATTCCTAAAATTTACAGC 57.432 29.630 6.22 0.00 35.89 4.40
1419 5436 9.859427 TTCAATTCCTAAAATTTACAGCTGATG 57.141 29.630 23.35 0.00 0.00 3.07
1424 5441 6.208402 TCCTAAAATTTACAGCTGATGCACAA 59.792 34.615 23.35 3.70 42.74 3.33
1426 5443 7.546667 CCTAAAATTTACAGCTGATGCACAAAT 59.453 33.333 23.35 11.90 42.74 2.32
1433 5450 4.271533 ACAGCTGATGCACAAATGTTTTTG 59.728 37.500 23.35 0.00 41.40 2.44
1455 5472 3.945921 GGTTAGTTATTGAGGGTCAAGCC 59.054 47.826 0.00 0.00 40.05 4.35
1499 5516 8.990163 AAAAACTTTGAGGACCAGACTTTATA 57.010 30.769 0.00 0.00 0.00 0.98
1582 5599 3.890756 TGATCAACATGGCAATGGATACC 59.109 43.478 5.94 0.00 38.19 2.73
1591 5609 1.271379 GCAATGGATACCCGCTACCAT 60.271 52.381 0.00 0.00 43.74 3.55
1595 5613 2.334977 TGGATACCCGCTACCATGAAT 58.665 47.619 0.00 0.00 34.29 2.57
1597 5615 2.301870 GGATACCCGCTACCATGAATCA 59.698 50.000 0.00 0.00 0.00 2.57
1598 5616 3.589988 GATACCCGCTACCATGAATCAG 58.410 50.000 0.00 0.00 0.00 2.90
1612 5630 4.088056 TGAATCAGACGGGTAAAAACCA 57.912 40.909 0.00 0.00 0.00 3.67
1620 5638 6.070078 TCAGACGGGTAAAAACCATATTAGGT 60.070 38.462 0.00 0.00 45.91 3.08
1621 5639 7.125507 TCAGACGGGTAAAAACCATATTAGGTA 59.874 37.037 0.00 0.00 42.25 3.08
1650 5668 7.783119 AGGGTTATGGAAAGTTAAATACCCATC 59.217 37.037 10.90 1.44 36.06 3.51
1656 5674 6.494146 TGGAAAGTTAAATACCCATCGGTTTT 59.506 34.615 0.00 0.00 40.58 2.43
1663 5681 5.925506 AATACCCATCGGTTTTTAAAGGG 57.074 39.130 5.17 5.17 40.58 3.95
1669 5689 5.280266 CCCATCGGTTTTTAAAGGGGAAAAT 60.280 40.000 0.00 0.00 36.40 1.82
1671 5691 4.633175 TCGGTTTTTAAAGGGGAAAATGC 58.367 39.130 0.00 0.00 0.00 3.56
1681 5701 0.319469 GGGAAAATGCACACAACGGG 60.319 55.000 0.00 0.00 0.00 5.28
1686 5706 4.303282 GAAAATGCACACAACGGGTAAAT 58.697 39.130 0.00 0.00 0.00 1.40
1689 5709 2.298610 TGCACACAACGGGTAAATTGA 58.701 42.857 0.00 0.00 0.00 2.57
1690 5710 2.688446 TGCACACAACGGGTAAATTGAA 59.312 40.909 0.00 0.00 0.00 2.69
1700 5720 6.852858 ACGGGTAAATTGAATTGTTTTTGG 57.147 33.333 0.00 0.00 0.00 3.28
1705 5725 7.912773 GGGTAAATTGAATTGTTTTTGGTGTTG 59.087 33.333 0.00 0.00 0.00 3.33
1711 5731 1.270907 TGTTTTTGGTGTTGGGTGCT 58.729 45.000 0.00 0.00 0.00 4.40
1723 5743 0.254462 TGGGTGCTTGTGAGTTGTCA 59.746 50.000 0.00 0.00 0.00 3.58
1727 5747 3.550842 GGGTGCTTGTGAGTTGTCATTTC 60.551 47.826 0.00 0.00 34.36 2.17
1740 5760 6.303839 AGTTGTCATTTCTGGGCTAGTTTTA 58.696 36.000 0.00 0.00 0.00 1.52
1741 5761 6.948309 AGTTGTCATTTCTGGGCTAGTTTTAT 59.052 34.615 0.00 0.00 0.00 1.40
1747 5767 4.772886 TCTGGGCTAGTTTTATTCTCCC 57.227 45.455 0.00 0.00 0.00 4.30
1749 5769 2.841881 TGGGCTAGTTTTATTCTCCCGT 59.158 45.455 0.00 0.00 35.09 5.28
1755 5775 3.939066 AGTTTTATTCTCCCGTGTCCTG 58.061 45.455 0.00 0.00 0.00 3.86
1758 5778 1.672854 TATTCTCCCGTGTCCTGGCG 61.673 60.000 0.00 0.00 0.00 5.69
1772 5792 2.980233 GGCGCTTGTGCAGGTCTT 60.980 61.111 7.64 0.00 39.64 3.01
1773 5793 2.558313 GCGCTTGTGCAGGTCTTC 59.442 61.111 0.00 0.00 39.64 2.87
1778 5798 0.318441 CTTGTGCAGGTCTTCTCGGA 59.682 55.000 0.00 0.00 0.00 4.55
1779 5799 0.976641 TTGTGCAGGTCTTCTCGGAT 59.023 50.000 0.00 0.00 0.00 4.18
1782 5802 0.747255 TGCAGGTCTTCTCGGATAGC 59.253 55.000 0.00 0.00 0.00 2.97
1804 5824 4.260170 CAGCTGGCTTATCACTCTTTTCT 58.740 43.478 5.57 0.00 0.00 2.52
1806 5826 4.019860 AGCTGGCTTATCACTCTTTTCTGA 60.020 41.667 0.00 0.00 0.00 3.27
1812 5832 7.550551 TGGCTTATCACTCTTTTCTGATAGTTG 59.449 37.037 0.00 0.00 32.29 3.16
1818 5838 6.013379 TCACTCTTTTCTGATAGTTGGTCCAT 60.013 38.462 0.00 0.00 0.00 3.41
1847 5867 5.698089 GTGGTAGTTTGTTAGTAGGGTGTTC 59.302 44.000 0.00 0.00 0.00 3.18
1848 5868 5.603813 TGGTAGTTTGTTAGTAGGGTGTTCT 59.396 40.000 0.00 0.00 0.00 3.01
1887 5910 6.942163 ATGCCAACAGACCATATCTATACT 57.058 37.500 0.00 0.00 35.15 2.12
1888 5911 8.435931 AATGCCAACAGACCATATCTATACTA 57.564 34.615 0.00 0.00 35.15 1.82
1889 5912 8.615360 ATGCCAACAGACCATATCTATACTAT 57.385 34.615 0.00 0.00 35.15 2.12
1890 5913 9.715119 ATGCCAACAGACCATATCTATACTATA 57.285 33.333 0.00 0.00 35.15 1.31
1891 5914 9.715119 TGCCAACAGACCATATCTATACTATAT 57.285 33.333 0.00 0.00 35.15 0.86
1977 6000 5.679734 AATAATGCTATTGCTTCTGACGG 57.320 39.130 0.00 0.00 40.48 4.79
1978 6001 2.698855 ATGCTATTGCTTCTGACGGT 57.301 45.000 0.00 0.00 40.48 4.83
1979 6002 3.819564 ATGCTATTGCTTCTGACGGTA 57.180 42.857 0.00 0.00 40.48 4.02
1980 6003 2.888594 TGCTATTGCTTCTGACGGTAC 58.111 47.619 0.00 0.00 40.48 3.34
1997 6020 4.434713 GGTACGTCATTGAAATTGCCTT 57.565 40.909 0.00 0.00 0.00 4.35
1998 6021 4.412207 GGTACGTCATTGAAATTGCCTTC 58.588 43.478 0.00 0.00 0.00 3.46
1999 6022 4.083003 GGTACGTCATTGAAATTGCCTTCA 60.083 41.667 0.00 0.00 33.48 3.02
2000 6023 4.582701 ACGTCATTGAAATTGCCTTCAA 57.417 36.364 7.82 7.82 46.45 2.69
2001 6024 4.942852 ACGTCATTGAAATTGCCTTCAAA 58.057 34.783 9.07 0.00 45.75 2.69
2002 6025 5.355596 ACGTCATTGAAATTGCCTTCAAAA 58.644 33.333 9.07 0.78 45.75 2.44
2003 6026 5.990996 ACGTCATTGAAATTGCCTTCAAAAT 59.009 32.000 9.07 0.00 45.75 1.82
2004 6027 6.482973 ACGTCATTGAAATTGCCTTCAAAATT 59.517 30.769 9.07 0.00 45.75 1.82
2005 6028 7.012232 ACGTCATTGAAATTGCCTTCAAAATTT 59.988 29.630 9.07 0.83 45.75 1.82
2006 6029 7.531534 CGTCATTGAAATTGCCTTCAAAATTTC 59.468 33.333 11.92 11.92 45.75 2.17
2015 6038 9.571816 AATTGCCTTCAAAATTTCAAAATAGGA 57.428 25.926 5.72 0.00 35.56 2.94
2016 6039 7.961325 TGCCTTCAAAATTTCAAAATAGGAC 57.039 32.000 5.72 0.19 0.00 3.85
2017 6040 7.734942 TGCCTTCAAAATTTCAAAATAGGACT 58.265 30.769 5.72 0.00 0.00 3.85
2018 6041 7.656948 TGCCTTCAAAATTTCAAAATAGGACTG 59.343 33.333 5.72 0.00 0.00 3.51
2019 6042 7.657354 GCCTTCAAAATTTCAAAATAGGACTGT 59.343 33.333 5.72 0.00 0.00 3.55
2020 6043 8.981647 CCTTCAAAATTTCAAAATAGGACTGTG 58.018 33.333 0.00 0.00 0.00 3.66
2021 6044 9.748708 CTTCAAAATTTCAAAATAGGACTGTGA 57.251 29.630 0.00 0.00 0.00 3.58
2030 6053 9.513906 TTCAAAATAGGACTGTGATATTTGTCA 57.486 29.630 7.30 0.00 31.30 3.58
2031 6054 9.513906 TCAAAATAGGACTGTGATATTTGTCAA 57.486 29.630 7.30 0.00 31.30 3.18
2032 6055 9.559958 CAAAATAGGACTGTGATATTTGTCAAC 57.440 33.333 7.30 0.00 31.30 3.18
2033 6056 9.520515 AAAATAGGACTGTGATATTTGTCAACT 57.479 29.630 7.30 0.00 31.30 3.16
2034 6057 8.498054 AATAGGACTGTGATATTTGTCAACTG 57.502 34.615 0.00 0.00 0.00 3.16
2035 6058 5.869579 AGGACTGTGATATTTGTCAACTGT 58.130 37.500 0.00 0.00 0.00 3.55
2036 6059 5.702670 AGGACTGTGATATTTGTCAACTGTG 59.297 40.000 0.00 0.00 0.00 3.66
2037 6060 5.470098 GGACTGTGATATTTGTCAACTGTGT 59.530 40.000 0.00 0.00 0.00 3.72
2038 6061 6.304356 ACTGTGATATTTGTCAACTGTGTG 57.696 37.500 0.00 0.00 0.00 3.82
2039 6062 5.239306 ACTGTGATATTTGTCAACTGTGTGG 59.761 40.000 0.00 0.00 0.00 4.17
2040 6063 4.023279 TGTGATATTTGTCAACTGTGTGGC 60.023 41.667 0.00 0.00 0.00 5.01
2041 6064 4.023279 GTGATATTTGTCAACTGTGTGGCA 60.023 41.667 0.00 0.00 0.00 4.92
2059 6082 3.641437 GCAGATTGCAAAACTACCACA 57.359 42.857 1.71 0.00 44.26 4.17
2060 6083 3.308530 GCAGATTGCAAAACTACCACAC 58.691 45.455 1.71 0.00 44.26 3.82
2061 6084 3.857010 GCAGATTGCAAAACTACCACACC 60.857 47.826 1.71 0.00 44.26 4.16
2062 6085 3.317711 CAGATTGCAAAACTACCACACCA 59.682 43.478 1.71 0.00 0.00 4.17
2063 6086 3.317993 AGATTGCAAAACTACCACACCAC 59.682 43.478 1.71 0.00 0.00 4.16
2064 6087 1.394618 TGCAAAACTACCACACCACC 58.605 50.000 0.00 0.00 0.00 4.61
2065 6088 0.671796 GCAAAACTACCACACCACCC 59.328 55.000 0.00 0.00 0.00 4.61
2066 6089 2.024825 GCAAAACTACCACACCACCCA 61.025 52.381 0.00 0.00 0.00 4.51
2067 6090 1.679153 CAAAACTACCACACCACCCAC 59.321 52.381 0.00 0.00 0.00 4.61
2068 6091 1.218844 AAACTACCACACCACCCACT 58.781 50.000 0.00 0.00 0.00 4.00
2069 6092 1.218844 AACTACCACACCACCCACTT 58.781 50.000 0.00 0.00 0.00 3.16
2070 6093 0.763035 ACTACCACACCACCCACTTC 59.237 55.000 0.00 0.00 0.00 3.01
2071 6094 1.056660 CTACCACACCACCCACTTCT 58.943 55.000 0.00 0.00 0.00 2.85
2072 6095 1.002087 CTACCACACCACCCACTTCTC 59.998 57.143 0.00 0.00 0.00 2.87
2073 6096 0.694444 ACCACACCACCCACTTCTCT 60.694 55.000 0.00 0.00 0.00 3.10
2074 6097 0.035458 CCACACCACCCACTTCTCTC 59.965 60.000 0.00 0.00 0.00 3.20
2075 6098 1.051812 CACACCACCCACTTCTCTCT 58.948 55.000 0.00 0.00 0.00 3.10
2076 6099 2.248248 CACACCACCCACTTCTCTCTA 58.752 52.381 0.00 0.00 0.00 2.43
2077 6100 2.632996 CACACCACCCACTTCTCTCTAA 59.367 50.000 0.00 0.00 0.00 2.10
2078 6101 2.633481 ACACCACCCACTTCTCTCTAAC 59.367 50.000 0.00 0.00 0.00 2.34
2079 6102 1.893801 ACCACCCACTTCTCTCTAACG 59.106 52.381 0.00 0.00 0.00 3.18
2080 6103 2.168496 CCACCCACTTCTCTCTAACGA 58.832 52.381 0.00 0.00 0.00 3.85
2081 6104 2.561419 CCACCCACTTCTCTCTAACGAA 59.439 50.000 0.00 0.00 0.00 3.85
2082 6105 3.195825 CCACCCACTTCTCTCTAACGAAT 59.804 47.826 0.00 0.00 0.00 3.34
2083 6106 4.425520 CACCCACTTCTCTCTAACGAATC 58.574 47.826 0.00 0.00 0.00 2.52
2084 6107 3.128938 ACCCACTTCTCTCTAACGAATCG 59.871 47.826 0.00 0.00 0.00 3.34
2085 6108 3.109619 CCACTTCTCTCTAACGAATCGC 58.890 50.000 1.15 0.00 0.00 4.58
2086 6109 3.181495 CCACTTCTCTCTAACGAATCGCT 60.181 47.826 1.15 0.00 0.00 4.93
2087 6110 4.032355 CACTTCTCTCTAACGAATCGCTC 58.968 47.826 1.15 0.00 0.00 5.03
2088 6111 3.065648 ACTTCTCTCTAACGAATCGCTCC 59.934 47.826 1.15 0.00 0.00 4.70
2089 6112 1.948145 TCTCTCTAACGAATCGCTCCC 59.052 52.381 1.15 0.00 0.00 4.30
2090 6113 1.950909 CTCTCTAACGAATCGCTCCCT 59.049 52.381 1.15 0.00 0.00 4.20
2091 6114 2.359531 CTCTCTAACGAATCGCTCCCTT 59.640 50.000 1.15 0.00 0.00 3.95
2092 6115 2.358267 TCTCTAACGAATCGCTCCCTTC 59.642 50.000 1.15 0.00 0.00 3.46
2094 6117 1.065102 CTAACGAATCGCTCCCTTCGA 59.935 52.381 1.15 0.00 45.31 3.71
2096 6119 0.030908 ACGAATCGCTCCCTTCGATC 59.969 55.000 1.15 0.00 44.80 3.69
2097 6120 0.664767 CGAATCGCTCCCTTCGATCC 60.665 60.000 0.00 0.00 44.80 3.36
2098 6121 0.676736 GAATCGCTCCCTTCGATCCT 59.323 55.000 0.00 0.00 44.80 3.24
2099 6122 1.887198 GAATCGCTCCCTTCGATCCTA 59.113 52.381 0.00 0.00 44.80 2.94
2100 6123 1.249407 ATCGCTCCCTTCGATCCTAC 58.751 55.000 0.00 0.00 42.28 3.18
2101 6124 0.822532 TCGCTCCCTTCGATCCTACC 60.823 60.000 0.00 0.00 0.00 3.18
2102 6125 0.824182 CGCTCCCTTCGATCCTACCT 60.824 60.000 0.00 0.00 0.00 3.08
2103 6126 0.963225 GCTCCCTTCGATCCTACCTC 59.037 60.000 0.00 0.00 0.00 3.85
2104 6127 1.623163 CTCCCTTCGATCCTACCTCC 58.377 60.000 0.00 0.00 0.00 4.30
2105 6128 1.146152 CTCCCTTCGATCCTACCTCCT 59.854 57.143 0.00 0.00 0.00 3.69
2106 6129 1.145325 TCCCTTCGATCCTACCTCCTC 59.855 57.143 0.00 0.00 0.00 3.71
2107 6130 1.146152 CCCTTCGATCCTACCTCCTCT 59.854 57.143 0.00 0.00 0.00 3.69
2108 6131 2.510613 CCTTCGATCCTACCTCCTCTC 58.489 57.143 0.00 0.00 0.00 3.20
2109 6132 2.147958 CTTCGATCCTACCTCCTCTCG 58.852 57.143 0.00 0.00 0.00 4.04
2110 6133 0.250381 TCGATCCTACCTCCTCTCGC 60.250 60.000 0.00 0.00 0.00 5.03
2111 6134 1.570347 CGATCCTACCTCCTCTCGCG 61.570 65.000 0.00 0.00 0.00 5.87
2112 6135 1.228306 ATCCTACCTCCTCTCGCGG 60.228 63.158 6.13 0.00 0.00 6.46
2113 6136 2.700407 ATCCTACCTCCTCTCGCGGG 62.700 65.000 6.13 1.01 0.00 6.13
2114 6137 3.597728 CTACCTCCTCTCGCGGGC 61.598 72.222 6.13 0.00 0.00 6.13
2115 6138 4.124943 TACCTCCTCTCGCGGGCT 62.125 66.667 6.13 0.00 0.00 5.19
2129 6152 4.995594 GGCTCCTCCCAATTCTGG 57.004 61.111 0.00 0.00 43.10 3.86
2137 6160 3.291611 CCAATTCTGGGCTGCCAC 58.708 61.111 22.05 10.55 39.30 5.01
2138 6161 2.353610 CCAATTCTGGGCTGCCACC 61.354 63.158 22.05 4.31 39.30 4.61
2148 6171 4.410400 CTGCCACCCTTCGACCCC 62.410 72.222 0.00 0.00 0.00 4.95
2150 6173 4.717313 GCCACCCTTCGACCCCAC 62.717 72.222 0.00 0.00 0.00 4.61
2151 6174 4.029809 CCACCCTTCGACCCCACC 62.030 72.222 0.00 0.00 0.00 4.61
2152 6175 2.928396 CACCCTTCGACCCCACCT 60.928 66.667 0.00 0.00 0.00 4.00
2153 6176 2.606826 ACCCTTCGACCCCACCTC 60.607 66.667 0.00 0.00 0.00 3.85
2154 6177 3.400054 CCCTTCGACCCCACCTCC 61.400 72.222 0.00 0.00 0.00 4.30
2155 6178 3.400054 CCTTCGACCCCACCTCCC 61.400 72.222 0.00 0.00 0.00 4.30
2156 6179 3.400054 CTTCGACCCCACCTCCCC 61.400 72.222 0.00 0.00 0.00 4.81
2157 6180 3.925914 CTTCGACCCCACCTCCCCT 62.926 68.421 0.00 0.00 0.00 4.79
2158 6181 3.918328 TTCGACCCCACCTCCCCTC 62.918 68.421 0.00 0.00 0.00 4.30
2160 6183 4.393778 GACCCCACCTCCCCTCGA 62.394 72.222 0.00 0.00 0.00 4.04
2161 6184 3.918328 GACCCCACCTCCCCTCGAA 62.918 68.421 0.00 0.00 0.00 3.71
2162 6185 3.400054 CCCCACCTCCCCTCGAAC 61.400 72.222 0.00 0.00 0.00 3.95
2163 6186 2.606519 CCCACCTCCCCTCGAACA 60.607 66.667 0.00 0.00 0.00 3.18
2164 6187 2.221299 CCCACCTCCCCTCGAACAA 61.221 63.158 0.00 0.00 0.00 2.83
2165 6188 1.758592 CCACCTCCCCTCGAACAAA 59.241 57.895 0.00 0.00 0.00 2.83
2166 6189 0.605589 CCACCTCCCCTCGAACAAAC 60.606 60.000 0.00 0.00 0.00 2.93
2167 6190 0.605589 CACCTCCCCTCGAACAAACC 60.606 60.000 0.00 0.00 0.00 3.27
2168 6191 1.057851 ACCTCCCCTCGAACAAACCA 61.058 55.000 0.00 0.00 0.00 3.67
2169 6192 0.109723 CCTCCCCTCGAACAAACCAA 59.890 55.000 0.00 0.00 0.00 3.67
2170 6193 1.235724 CTCCCCTCGAACAAACCAAC 58.764 55.000 0.00 0.00 0.00 3.77
2171 6194 0.841289 TCCCCTCGAACAAACCAACT 59.159 50.000 0.00 0.00 0.00 3.16
2172 6195 1.202722 TCCCCTCGAACAAACCAACTC 60.203 52.381 0.00 0.00 0.00 3.01
2173 6196 1.202770 CCCCTCGAACAAACCAACTCT 60.203 52.381 0.00 0.00 0.00 3.24
2174 6197 1.873591 CCCTCGAACAAACCAACTCTG 59.126 52.381 0.00 0.00 0.00 3.35
2175 6198 2.484770 CCCTCGAACAAACCAACTCTGA 60.485 50.000 0.00 0.00 0.00 3.27
2176 6199 2.802816 CCTCGAACAAACCAACTCTGAG 59.197 50.000 2.45 2.45 0.00 3.35
2177 6200 2.802816 CTCGAACAAACCAACTCTGAGG 59.197 50.000 9.85 0.00 0.00 3.86
2178 6201 2.169769 TCGAACAAACCAACTCTGAGGT 59.830 45.455 9.85 0.00 40.61 3.85
2180 6203 3.242739 CGAACAAACCAACTCTGAGGTTG 60.243 47.826 9.85 10.49 46.92 3.77
2181 6204 2.024414 ACAAACCAACTCTGAGGTTGC 58.976 47.619 9.85 0.00 46.92 4.17
2182 6205 1.002468 CAAACCAACTCTGAGGTTGCG 60.002 52.381 9.85 7.82 46.92 4.85
2183 6206 0.535102 AACCAACTCTGAGGTTGCGG 60.535 55.000 9.85 2.77 45.91 5.69
2184 6207 1.672356 CCAACTCTGAGGTTGCGGG 60.672 63.158 9.85 0.00 43.48 6.13
2185 6208 1.672356 CAACTCTGAGGTTGCGGGG 60.672 63.158 9.85 0.00 39.76 5.73
2186 6209 2.147387 AACTCTGAGGTTGCGGGGT 61.147 57.895 9.85 0.00 0.00 4.95
2187 6210 2.113243 AACTCTGAGGTTGCGGGGTC 62.113 60.000 9.85 0.00 0.00 4.46
2188 6211 3.316573 CTCTGAGGTTGCGGGGTCC 62.317 68.421 0.00 0.00 0.00 4.46
2189 6212 3.636231 CTGAGGTTGCGGGGTCCA 61.636 66.667 0.00 0.00 0.00 4.02
2190 6213 2.933287 TGAGGTTGCGGGGTCCAT 60.933 61.111 0.00 0.00 0.00 3.41
2191 6214 2.124695 GAGGTTGCGGGGTCCATC 60.125 66.667 0.00 0.00 0.00 3.51
2192 6215 3.699134 GAGGTTGCGGGGTCCATCC 62.699 68.421 0.00 0.00 0.00 3.51
2201 6224 1.680338 GGGGTCCATCCGATTTTCTG 58.320 55.000 0.00 0.00 37.00 3.02
2202 6225 1.680338 GGGTCCATCCGATTTTCTGG 58.320 55.000 0.00 0.00 37.00 3.86
2203 6226 1.680338 GGTCCATCCGATTTTCTGGG 58.320 55.000 0.00 0.00 0.00 4.45
2204 6227 1.064685 GGTCCATCCGATTTTCTGGGT 60.065 52.381 0.00 0.00 0.00 4.51
2205 6228 2.171870 GGTCCATCCGATTTTCTGGGTA 59.828 50.000 0.00 0.00 0.00 3.69
2206 6229 3.467803 GTCCATCCGATTTTCTGGGTAG 58.532 50.000 0.00 0.00 0.00 3.18
2207 6230 3.112263 TCCATCCGATTTTCTGGGTAGT 58.888 45.455 0.00 0.00 0.00 2.73
2208 6231 3.134081 TCCATCCGATTTTCTGGGTAGTC 59.866 47.826 0.00 0.00 0.00 2.59
2209 6232 3.118408 CCATCCGATTTTCTGGGTAGTCA 60.118 47.826 0.00 0.00 0.00 3.41
2210 6233 3.887621 TCCGATTTTCTGGGTAGTCAG 57.112 47.619 0.00 0.00 36.17 3.51
2211 6234 2.093658 TCCGATTTTCTGGGTAGTCAGC 60.094 50.000 0.00 0.00 34.91 4.26
2212 6235 2.093447 CCGATTTTCTGGGTAGTCAGCT 60.093 50.000 0.00 0.00 34.91 4.24
2213 6236 3.132289 CCGATTTTCTGGGTAGTCAGCTA 59.868 47.826 0.00 0.00 34.91 3.32
2214 6237 4.202264 CCGATTTTCTGGGTAGTCAGCTAT 60.202 45.833 0.00 0.00 34.91 2.97
2215 6238 5.360591 CGATTTTCTGGGTAGTCAGCTATT 58.639 41.667 0.00 0.00 34.91 1.73
2216 6239 5.817816 CGATTTTCTGGGTAGTCAGCTATTT 59.182 40.000 0.00 0.00 34.91 1.40
2217 6240 6.984474 CGATTTTCTGGGTAGTCAGCTATTTA 59.016 38.462 0.00 0.00 34.91 1.40
2218 6241 7.494625 CGATTTTCTGGGTAGTCAGCTATTTAA 59.505 37.037 0.00 0.00 34.91 1.52
2219 6242 9.174166 GATTTTCTGGGTAGTCAGCTATTTAAA 57.826 33.333 0.00 0.00 34.91 1.52
2220 6243 8.927675 TTTTCTGGGTAGTCAGCTATTTAAAA 57.072 30.769 0.00 0.00 34.91 1.52
2221 6244 8.927675 TTTCTGGGTAGTCAGCTATTTAAAAA 57.072 30.769 0.00 0.00 34.91 1.94
2222 6245 9.528489 TTTCTGGGTAGTCAGCTATTTAAAAAT 57.472 29.630 0.00 0.00 34.91 1.82
2224 6247 9.832445 TCTGGGTAGTCAGCTATTTAAAAATAG 57.168 33.333 15.20 15.20 46.72 1.73
2225 6248 8.974060 TGGGTAGTCAGCTATTTAAAAATAGG 57.026 34.615 19.17 7.94 45.03 2.57
2226 6249 7.501225 TGGGTAGTCAGCTATTTAAAAATAGGC 59.499 37.037 19.17 13.21 45.03 3.93
2227 6250 7.501225 GGGTAGTCAGCTATTTAAAAATAGGCA 59.499 37.037 19.17 1.24 45.03 4.75
2228 6251 8.899771 GGTAGTCAGCTATTTAAAAATAGGCAA 58.100 33.333 19.17 6.38 45.03 4.52
2251 6274 5.736951 AAAATGGAAAAATGGTGGATCGA 57.263 34.783 0.00 0.00 0.00 3.59
2252 6275 5.736951 AAATGGAAAAATGGTGGATCGAA 57.263 34.783 0.00 0.00 0.00 3.71
2253 6276 4.718940 ATGGAAAAATGGTGGATCGAAC 57.281 40.909 0.00 0.00 0.00 3.95
2254 6277 2.823154 TGGAAAAATGGTGGATCGAACC 59.177 45.455 4.46 4.46 38.26 3.62
2255 6278 2.165641 GGAAAAATGGTGGATCGAACCC 59.834 50.000 9.50 4.75 36.83 4.11
2256 6279 2.595750 AAAATGGTGGATCGAACCCA 57.404 45.000 9.50 7.53 36.83 4.51
2261 6284 2.660206 TGGATCGAACCCACACCG 59.340 61.111 9.50 0.00 0.00 4.94
2262 6285 2.211410 TGGATCGAACCCACACCGT 61.211 57.895 9.50 0.00 0.00 4.83
2263 6286 1.447314 GGATCGAACCCACACCGTC 60.447 63.158 0.00 0.00 0.00 4.79
2264 6287 1.290955 GATCGAACCCACACCGTCA 59.709 57.895 0.00 0.00 0.00 4.35
2265 6288 1.005394 ATCGAACCCACACCGTCAC 60.005 57.895 0.00 0.00 0.00 3.67
2266 6289 1.750341 ATCGAACCCACACCGTCACA 61.750 55.000 0.00 0.00 0.00 3.58
2267 6290 1.301401 CGAACCCACACCGTCACAT 60.301 57.895 0.00 0.00 0.00 3.21
2268 6291 0.038067 CGAACCCACACCGTCACATA 60.038 55.000 0.00 0.00 0.00 2.29
2269 6292 1.404986 CGAACCCACACCGTCACATAT 60.405 52.381 0.00 0.00 0.00 1.78
2270 6293 2.159212 CGAACCCACACCGTCACATATA 60.159 50.000 0.00 0.00 0.00 0.86
2271 6294 3.491964 CGAACCCACACCGTCACATATAT 60.492 47.826 0.00 0.00 0.00 0.86
2272 6295 4.448210 GAACCCACACCGTCACATATATT 58.552 43.478 0.00 0.00 0.00 1.28
2273 6296 3.804036 ACCCACACCGTCACATATATTG 58.196 45.455 0.00 0.00 0.00 1.90
2274 6297 3.452990 ACCCACACCGTCACATATATTGA 59.547 43.478 0.00 0.00 0.00 2.57
2275 6298 4.080807 ACCCACACCGTCACATATATTGAA 60.081 41.667 0.00 0.00 0.00 2.69
2276 6299 5.063204 CCCACACCGTCACATATATTGAAT 58.937 41.667 0.00 0.00 0.00 2.57
2277 6300 5.049474 CCCACACCGTCACATATATTGAATG 60.049 44.000 0.00 0.00 0.00 2.67
2278 6301 5.527214 CCACACCGTCACATATATTGAATGT 59.473 40.000 0.00 0.00 38.08 2.71
2279 6302 6.704050 CCACACCGTCACATATATTGAATGTA 59.296 38.462 0.00 0.00 35.82 2.29
2280 6303 7.225734 CCACACCGTCACATATATTGAATGTAA 59.774 37.037 0.00 0.00 35.82 2.41
2281 6304 8.773645 CACACCGTCACATATATTGAATGTAAT 58.226 33.333 0.00 0.00 35.82 1.89
2282 6305 8.773645 ACACCGTCACATATATTGAATGTAATG 58.226 33.333 0.00 0.00 35.82 1.90
2283 6306 8.987890 CACCGTCACATATATTGAATGTAATGA 58.012 33.333 0.00 0.00 35.82 2.57
2284 6307 8.988934 ACCGTCACATATATTGAATGTAATGAC 58.011 33.333 14.34 14.34 35.82 3.06
2285 6308 8.987890 CCGTCACATATATTGAATGTAATGACA 58.012 33.333 19.70 0.00 40.72 3.58
2291 6314 9.999009 CATATATTGAATGTAATGACATCCAGC 57.001 33.333 0.00 0.00 45.93 4.85
2292 6315 9.970553 ATATATTGAATGTAATGACATCCAGCT 57.029 29.630 0.00 0.00 45.93 4.24
2294 6317 9.970553 ATATTGAATGTAATGACATCCAGCTAT 57.029 29.630 0.00 0.00 45.93 2.97
2295 6318 7.500720 TTGAATGTAATGACATCCAGCTATG 57.499 36.000 0.00 0.00 45.93 2.23
2296 6319 5.471116 TGAATGTAATGACATCCAGCTATGC 59.529 40.000 0.00 0.00 45.93 3.14
2297 6320 4.694760 TGTAATGACATCCAGCTATGCT 57.305 40.909 0.00 0.00 40.77 3.79
2298 6321 5.806654 TGTAATGACATCCAGCTATGCTA 57.193 39.130 0.00 0.00 36.40 3.49
2299 6322 5.787380 TGTAATGACATCCAGCTATGCTAG 58.213 41.667 0.00 0.00 36.40 3.42
2300 6323 7.073733 ATGTAATGACATCCAGCTATGCTAGC 61.074 42.308 8.10 8.10 46.57 3.42
2319 6342 7.446001 GCTAGCCAGCTTTATTGATTAGATT 57.554 36.000 2.29 0.00 44.93 2.40
2320 6343 7.525759 GCTAGCCAGCTTTATTGATTAGATTC 58.474 38.462 2.29 0.00 44.93 2.52
2321 6344 7.173907 GCTAGCCAGCTTTATTGATTAGATTCA 59.826 37.037 2.29 0.00 44.93 2.57
2322 6345 7.886629 AGCCAGCTTTATTGATTAGATTCAA 57.113 32.000 0.00 0.00 39.77 2.69
2323 6346 8.474710 AGCCAGCTTTATTGATTAGATTCAAT 57.525 30.769 5.17 5.17 45.74 2.57
2324 6347 8.574737 AGCCAGCTTTATTGATTAGATTCAATC 58.425 33.333 3.14 0.00 43.50 2.67
2325 6348 8.574737 GCCAGCTTTATTGATTAGATTCAATCT 58.425 33.333 4.98 4.98 43.50 2.40
2349 6372 9.911138 TCTACGTACTAGATGTATCTACTTGAG 57.089 37.037 0.00 0.00 38.32 3.02
2350 6373 9.911138 CTACGTACTAGATGTATCTACTTGAGA 57.089 37.037 0.00 0.00 38.32 3.27
2352 6375 9.210329 ACGTACTAGATGTATCTACTTGAGATG 57.790 37.037 0.00 0.00 45.05 2.90
2353 6376 9.425577 CGTACTAGATGTATCTACTTGAGATGA 57.574 37.037 0.00 0.00 45.05 2.92
2387 6410 6.827586 AAAAAGACAACCAACAGTAACTGA 57.172 33.333 0.00 0.00 35.18 3.41
2388 6411 6.827586 AAAAGACAACCAACAGTAACTGAA 57.172 33.333 0.00 0.00 35.18 3.02
2389 6412 6.827586 AAAGACAACCAACAGTAACTGAAA 57.172 33.333 0.00 0.00 35.18 2.69
2390 6413 6.827586 AAGACAACCAACAGTAACTGAAAA 57.172 33.333 0.00 0.00 35.18 2.29
2391 6414 7.404671 AAGACAACCAACAGTAACTGAAAAT 57.595 32.000 0.00 0.00 35.18 1.82
2392 6415 7.027778 AGACAACCAACAGTAACTGAAAATC 57.972 36.000 0.00 0.00 35.18 2.17
2393 6416 6.039382 AGACAACCAACAGTAACTGAAAATCC 59.961 38.462 0.00 0.00 35.18 3.01
2394 6417 5.654650 ACAACCAACAGTAACTGAAAATCCA 59.345 36.000 0.00 0.00 35.18 3.41
2395 6418 6.153680 ACAACCAACAGTAACTGAAAATCCAA 59.846 34.615 0.00 0.00 35.18 3.53
2396 6419 6.783708 ACCAACAGTAACTGAAAATCCAAA 57.216 33.333 0.00 0.00 35.18 3.28
2397 6420 7.176589 ACCAACAGTAACTGAAAATCCAAAA 57.823 32.000 0.00 0.00 35.18 2.44
2398 6421 7.039270 ACCAACAGTAACTGAAAATCCAAAAC 58.961 34.615 0.00 0.00 35.18 2.43
2399 6422 7.038659 CCAACAGTAACTGAAAATCCAAAACA 58.961 34.615 0.00 0.00 35.18 2.83
2400 6423 7.010091 CCAACAGTAACTGAAAATCCAAAACAC 59.990 37.037 0.00 0.00 35.18 3.32
2401 6424 6.569780 ACAGTAACTGAAAATCCAAAACACC 58.430 36.000 0.00 0.00 35.18 4.16
2402 6425 6.153680 ACAGTAACTGAAAATCCAAAACACCA 59.846 34.615 0.00 0.00 35.18 4.17
2403 6426 6.697019 CAGTAACTGAAAATCCAAAACACCAG 59.303 38.462 0.00 0.00 32.44 4.00
2404 6427 4.058721 ACTGAAAATCCAAAACACCAGC 57.941 40.909 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 74 8.809066 TGGTACTCACATGTACTACATAAAGTT 58.191 33.333 0.00 0.00 41.64 2.66
78 82 4.577693 TCGGATGGTACTCACATGTACTAC 59.422 45.833 0.00 0.00 41.64 2.73
79 83 4.784177 TCGGATGGTACTCACATGTACTA 58.216 43.478 0.00 0.00 41.64 1.82
101 108 3.699894 CACTGCAGCTCCGGGACT 61.700 66.667 15.27 0.00 0.00 3.85
117 166 8.711457 CGCATGTATATAATCTGAACAATCACA 58.289 33.333 0.00 0.00 0.00 3.58
127 176 8.376203 GTTGCTCTTACGCATGTATATAATCTG 58.624 37.037 0.00 0.00 40.04 2.90
143 193 3.067833 GACCTTGTGGAGTTGCTCTTAC 58.932 50.000 0.00 0.00 37.04 2.34
158 208 0.603569 AGCCCGATATAGCGACCTTG 59.396 55.000 12.81 0.00 0.00 3.61
159 209 2.211250 TAGCCCGATATAGCGACCTT 57.789 50.000 12.81 0.00 0.00 3.50
163 213 2.418197 GCCAATTAGCCCGATATAGCGA 60.418 50.000 12.81 0.00 0.00 4.93
164 214 1.933853 GCCAATTAGCCCGATATAGCG 59.066 52.381 2.75 2.75 0.00 4.26
165 215 2.985896 TGCCAATTAGCCCGATATAGC 58.014 47.619 0.00 0.00 0.00 2.97
166 216 8.774586 GTTATTATGCCAATTAGCCCGATATAG 58.225 37.037 0.00 0.00 0.00 1.31
167 217 7.717875 GGTTATTATGCCAATTAGCCCGATATA 59.282 37.037 0.00 0.00 0.00 0.86
201 257 2.955660 GTGATAGCTGCTAGAGTGTCCT 59.044 50.000 15.41 0.00 0.00 3.85
203 259 2.287308 CCGTGATAGCTGCTAGAGTGTC 60.287 54.545 15.41 7.78 0.00 3.67
204 260 1.678627 CCGTGATAGCTGCTAGAGTGT 59.321 52.381 15.41 0.00 0.00 3.55
205 261 1.000827 CCCGTGATAGCTGCTAGAGTG 60.001 57.143 15.41 5.33 0.00 3.51
206 262 1.323412 CCCGTGATAGCTGCTAGAGT 58.677 55.000 15.41 0.00 0.00 3.24
207 263 1.268352 GACCCGTGATAGCTGCTAGAG 59.732 57.143 15.41 6.09 0.00 2.43
208 264 1.319541 GACCCGTGATAGCTGCTAGA 58.680 55.000 15.41 1.37 0.00 2.43
209 265 1.032794 TGACCCGTGATAGCTGCTAG 58.967 55.000 15.41 2.85 0.00 3.42
210 266 0.744874 GTGACCCGTGATAGCTGCTA 59.255 55.000 12.40 12.40 0.00 3.49
211 267 1.517832 GTGACCCGTGATAGCTGCT 59.482 57.895 7.57 7.57 0.00 4.24
212 268 1.521681 GGTGACCCGTGATAGCTGC 60.522 63.158 0.00 0.00 0.00 5.25
213 269 0.465705 ATGGTGACCCGTGATAGCTG 59.534 55.000 0.00 0.00 0.00 4.24
217 273 5.304778 CATGAATTATGGTGACCCGTGATA 58.695 41.667 0.00 0.00 32.95 2.15
218 274 3.924114 TGAATTATGGTGACCCGTGAT 57.076 42.857 0.00 0.00 0.00 3.06
219 275 3.540617 CATGAATTATGGTGACCCGTGA 58.459 45.455 0.00 0.00 32.95 4.35
244 313 0.179081 GTGGACTGAATACGGAGGCC 60.179 60.000 0.00 0.00 0.00 5.19
247 316 2.271800 GCTTGTGGACTGAATACGGAG 58.728 52.381 0.00 0.00 0.00 4.63
251 320 2.027192 TGGAGGCTTGTGGACTGAATAC 60.027 50.000 0.00 0.00 30.21 1.89
254 323 1.067295 ATGGAGGCTTGTGGACTGAA 58.933 50.000 0.00 0.00 30.21 3.02
260 329 4.392940 CCTCTAAATATGGAGGCTTGTGG 58.607 47.826 6.69 0.00 45.95 4.17
268 337 6.962902 ACTTCCCCTATCCTCTAAATATGGAG 59.037 42.308 0.00 0.00 34.14 3.86
288 357 1.546029 GCATCCTCCAAACCAACTTCC 59.454 52.381 0.00 0.00 0.00 3.46
291 360 0.110486 ACGCATCCTCCAAACCAACT 59.890 50.000 0.00 0.00 0.00 3.16
304 373 1.209128 CGGTTGGTAGATGACGCATC 58.791 55.000 10.63 10.63 40.80 3.91
305 374 0.810031 GCGGTTGGTAGATGACGCAT 60.810 55.000 0.00 0.00 45.57 4.73
310 379 1.820519 ACGTAAGCGGTTGGTAGATGA 59.179 47.619 10.73 0.00 43.45 2.92
322 391 1.153628 CTTCCCTCCCACGTAAGCG 60.154 63.158 0.00 0.00 45.62 4.68
339 408 3.843027 AGTCTGATGATGGAGGTGAAACT 59.157 43.478 0.00 0.00 36.74 2.66
346 415 1.070445 GCAGGAGTCTGATGATGGAGG 59.930 57.143 0.00 0.00 43.49 4.30
351 420 1.134159 GCCTTGCAGGAGTCTGATGAT 60.134 52.381 0.00 0.00 43.49 2.45
353 422 0.747283 GGCCTTGCAGGAGTCTGATG 60.747 60.000 0.00 0.00 43.49 3.07
354 423 0.913451 AGGCCTTGCAGGAGTCTGAT 60.913 55.000 0.00 0.00 43.49 2.90
372 441 3.645212 TCATTGGCTGGAAGAGGAGATAG 59.355 47.826 0.00 0.00 34.07 2.08
394 463 3.726558 ATGCCATGGCCATCTGCGT 62.727 57.895 33.44 22.72 42.61 5.24
421 490 4.413087 CGGCGGATACTATTAGCTAACAG 58.587 47.826 10.26 10.26 0.00 3.16
441 510 3.423154 GAGGAAGTTGGCACGCGG 61.423 66.667 12.47 0.00 0.00 6.46
457 526 2.608059 TATGGGCGGTGGTGGTGA 60.608 61.111 0.00 0.00 0.00 4.02
458 527 2.124736 CTATGGGCGGTGGTGGTG 60.125 66.667 0.00 0.00 0.00 4.17
459 528 4.109675 GCTATGGGCGGTGGTGGT 62.110 66.667 0.00 0.00 0.00 4.16
461 530 3.757248 GAGGCTATGGGCGGTGGTG 62.757 68.421 0.00 0.00 42.94 4.17
462 531 3.480133 GAGGCTATGGGCGGTGGT 61.480 66.667 0.00 0.00 42.94 4.16
464 533 3.479203 TGGAGGCTATGGGCGGTG 61.479 66.667 0.00 0.00 42.94 4.94
465 534 3.480133 GTGGAGGCTATGGGCGGT 61.480 66.667 0.00 0.00 42.94 5.68
466 535 2.270874 AAAGTGGAGGCTATGGGCGG 62.271 60.000 0.00 0.00 42.94 6.13
467 536 0.815615 GAAAGTGGAGGCTATGGGCG 60.816 60.000 0.00 0.00 42.94 6.13
468 537 0.548510 AGAAAGTGGAGGCTATGGGC 59.451 55.000 0.00 0.00 40.90 5.36
469 538 1.839994 TGAGAAAGTGGAGGCTATGGG 59.160 52.381 0.00 0.00 0.00 4.00
470 539 2.420687 GGTGAGAAAGTGGAGGCTATGG 60.421 54.545 0.00 0.00 0.00 2.74
471 540 2.237143 TGGTGAGAAAGTGGAGGCTATG 59.763 50.000 0.00 0.00 0.00 2.23
472 541 2.237392 GTGGTGAGAAAGTGGAGGCTAT 59.763 50.000 0.00 0.00 0.00 2.97
473 542 1.623811 GTGGTGAGAAAGTGGAGGCTA 59.376 52.381 0.00 0.00 0.00 3.93
474 543 0.398318 GTGGTGAGAAAGTGGAGGCT 59.602 55.000 0.00 0.00 0.00 4.58
475 544 0.606673 GGTGGTGAGAAAGTGGAGGC 60.607 60.000 0.00 0.00 0.00 4.70
510 3441 2.263540 GCGGCGGTGAGGAAAGTA 59.736 61.111 9.78 0.00 0.00 2.24
517 3448 2.971428 ATATTGTCGGCGGCGGTGAG 62.971 60.000 31.73 2.49 0.00 3.51
518 3449 1.736365 TATATTGTCGGCGGCGGTGA 61.736 55.000 31.73 16.98 0.00 4.02
526 3459 5.734855 AAACATCAGTGTATATTGTCGGC 57.265 39.130 0.00 0.00 37.67 5.54
529 3462 7.180079 CACCGAAAACATCAGTGTATATTGTC 58.820 38.462 0.00 0.00 37.67 3.18
541 3474 2.158559 CCATGTCCACCGAAAACATCA 58.841 47.619 0.00 0.00 31.43 3.07
544 3477 0.466372 TGCCATGTCCACCGAAAACA 60.466 50.000 0.00 0.00 0.00 2.83
579 3512 1.416401 ACCAACAACATCGACCTCACT 59.584 47.619 0.00 0.00 0.00 3.41
604 3537 1.318576 CACAACCCTTTTCTCCGCTT 58.681 50.000 0.00 0.00 0.00 4.68
664 3610 1.353103 CATTTGATGACGGCGGCTC 59.647 57.895 16.45 9.90 0.00 4.70
668 3614 0.795698 TGACACATTTGATGACGGCG 59.204 50.000 4.80 4.80 0.00 6.46
714 3664 7.041644 TGGTTAAACACTTGATCTTTCTAACCG 60.042 37.037 0.00 0.00 35.97 4.44
718 3668 7.514721 AGGTGGTTAAACACTTGATCTTTCTA 58.485 34.615 22.41 0.00 41.09 2.10
719 3669 6.365520 AGGTGGTTAAACACTTGATCTTTCT 58.634 36.000 22.41 5.61 41.09 2.52
764 3718 3.699038 TGACGTATGGACTGATCATGACA 59.301 43.478 0.00 0.00 0.00 3.58
854 3829 1.662122 CCCCGTTGCTGTAATACGAAC 59.338 52.381 0.00 0.00 37.47 3.95
860 3835 1.555967 ATTTGCCCCGTTGCTGTAAT 58.444 45.000 0.00 0.00 0.00 1.89
897 3873 3.060272 CACTTTACGTGTCTGCTCTGTTG 60.060 47.826 0.00 0.00 38.84 3.33
922 3907 3.368236 GTGACTGGCTCACGATTTTCTAC 59.632 47.826 0.00 0.00 40.14 2.59
923 3908 3.585862 GTGACTGGCTCACGATTTTCTA 58.414 45.455 0.00 0.00 40.14 2.10
976 3962 3.615709 AAAACCCAAGCGGCCTGC 61.616 61.111 11.02 11.02 46.98 4.85
1400 5417 5.953183 TGTGCATCAGCTGTAAATTTTAGG 58.047 37.500 14.67 0.00 42.74 2.69
1404 5421 6.225318 ACATTTGTGCATCAGCTGTAAATTT 58.775 32.000 14.67 0.00 42.74 1.82
1408 5425 4.852134 AACATTTGTGCATCAGCTGTAA 57.148 36.364 14.67 0.00 42.74 2.41
1414 5431 5.738118 AACCAAAAACATTTGTGCATCAG 57.262 34.783 0.00 0.00 0.00 2.90
1416 5433 6.843069 ACTAACCAAAAACATTTGTGCATC 57.157 33.333 0.00 0.00 0.00 3.91
1417 5434 8.900983 ATAACTAACCAAAAACATTTGTGCAT 57.099 26.923 0.00 0.00 0.00 3.96
1419 5436 8.821894 TCAATAACTAACCAAAAACATTTGTGC 58.178 29.630 1.17 0.00 0.00 4.57
1424 5441 8.257602 ACCCTCAATAACTAACCAAAAACATT 57.742 30.769 0.00 0.00 0.00 2.71
1426 5443 6.834451 TGACCCTCAATAACTAACCAAAAACA 59.166 34.615 0.00 0.00 0.00 2.83
1433 5450 3.945921 GGCTTGACCCTCAATAACTAACC 59.054 47.826 0.00 0.00 35.59 2.85
1455 5472 2.174363 TTGTCTGAGCCACACATCAG 57.826 50.000 0.00 0.00 43.53 2.90
1478 5495 7.106239 CACATATAAAGTCTGGTCCTCAAAGT 58.894 38.462 0.00 0.00 0.00 2.66
1488 5505 5.734720 AGTCACACCACATATAAAGTCTGG 58.265 41.667 0.00 0.00 0.00 3.86
1560 5577 3.890756 GGTATCCATTGCCATGTTGATCA 59.109 43.478 0.00 0.00 0.00 2.92
1562 5579 3.233507 GGGTATCCATTGCCATGTTGAT 58.766 45.455 0.00 0.00 0.00 2.57
1578 5595 3.006967 GTCTGATTCATGGTAGCGGGTAT 59.993 47.826 0.00 0.00 0.00 2.73
1582 5599 1.491670 CGTCTGATTCATGGTAGCGG 58.508 55.000 0.00 0.00 0.00 5.52
1591 5609 4.088056 TGGTTTTTACCCGTCTGATTCA 57.912 40.909 0.00 0.00 0.00 2.57
1595 5613 6.070078 ACCTAATATGGTTTTTACCCGTCTGA 60.070 38.462 0.00 0.00 36.89 3.27
1597 5615 6.317663 ACCTAATATGGTTTTTACCCGTCT 57.682 37.500 0.00 0.00 36.89 4.18
1598 5616 9.777297 TTATACCTAATATGGTTTTTACCCGTC 57.223 33.333 0.00 0.00 41.22 4.79
1621 5639 9.650714 GGGTATTTAACTTTCCATAACCCTTAT 57.349 33.333 0.00 0.00 0.00 1.73
1645 5663 2.810164 TCCCCTTTAAAAACCGATGGG 58.190 47.619 0.00 0.00 40.11 4.00
1650 5668 4.212425 GTGCATTTTCCCCTTTAAAAACCG 59.788 41.667 0.00 0.00 30.20 4.44
1656 5674 4.698575 GTTGTGTGCATTTTCCCCTTTAA 58.301 39.130 0.00 0.00 0.00 1.52
1661 5679 0.319469 CCGTTGTGTGCATTTTCCCC 60.319 55.000 0.00 0.00 0.00 4.81
1663 5681 0.387565 ACCCGTTGTGTGCATTTTCC 59.612 50.000 0.00 0.00 0.00 3.13
1669 5689 2.298610 TCAATTTACCCGTTGTGTGCA 58.701 42.857 0.00 0.00 0.00 4.57
1671 5691 5.285651 ACAATTCAATTTACCCGTTGTGTG 58.714 37.500 0.00 0.00 0.00 3.82
1681 5701 7.912773 CCCAACACCAAAAACAATTCAATTTAC 59.087 33.333 0.00 0.00 0.00 2.01
1686 5706 4.697352 CACCCAACACCAAAAACAATTCAA 59.303 37.500 0.00 0.00 0.00 2.69
1689 5709 3.013219 GCACCCAACACCAAAAACAATT 58.987 40.909 0.00 0.00 0.00 2.32
1690 5710 2.238395 AGCACCCAACACCAAAAACAAT 59.762 40.909 0.00 0.00 0.00 2.71
1700 5720 1.102978 AACTCACAAGCACCCAACAC 58.897 50.000 0.00 0.00 0.00 3.32
1705 5725 1.609208 ATGACAACTCACAAGCACCC 58.391 50.000 0.00 0.00 0.00 4.61
1711 5731 2.622942 GCCCAGAAATGACAACTCACAA 59.377 45.455 0.00 0.00 0.00 3.33
1723 5743 6.129874 GGGAGAATAAAACTAGCCCAGAAAT 58.870 40.000 0.00 0.00 34.25 2.17
1727 5747 3.118371 ACGGGAGAATAAAACTAGCCCAG 60.118 47.826 0.00 0.00 33.69 4.45
1740 5760 2.990479 GCCAGGACACGGGAGAAT 59.010 61.111 0.00 0.00 33.27 2.40
1741 5761 3.691342 CGCCAGGACACGGGAGAA 61.691 66.667 0.00 0.00 33.85 2.87
1747 5767 3.716006 CACAAGCGCCAGGACACG 61.716 66.667 2.29 0.00 0.00 4.49
1749 5769 4.560743 TGCACAAGCGCCAGGACA 62.561 61.111 2.29 0.00 46.23 4.02
1755 5775 2.970974 GAAGACCTGCACAAGCGCC 61.971 63.158 2.29 0.00 46.23 6.53
1758 5778 1.294659 CCGAGAAGACCTGCACAAGC 61.295 60.000 0.00 0.00 42.57 4.01
1772 5792 3.133014 GCCAGCTGCTATCCGAGA 58.867 61.111 8.66 0.00 36.87 4.04
1782 5802 4.094590 CAGAAAAGAGTGATAAGCCAGCTG 59.905 45.833 6.78 6.78 0.00 4.24
1818 5838 4.529377 CCTACTAACAAACTACCACCAGGA 59.471 45.833 0.00 0.00 38.69 3.86
1858 5881 2.198827 TGGTCTGTTGGCATTACAGG 57.801 50.000 16.96 2.09 42.53 4.00
1865 5888 9.715119 ATATAGTATAGATATGGTCTGTTGGCA 57.285 33.333 0.00 0.00 37.83 4.92
1951 5974 8.935844 CCGTCAGAAGCAATAGCATTATTATTA 58.064 33.333 0.00 0.00 45.49 0.98
1952 5975 7.445402 ACCGTCAGAAGCAATAGCATTATTATT 59.555 33.333 0.00 0.00 45.49 1.40
1953 5976 6.936900 ACCGTCAGAAGCAATAGCATTATTAT 59.063 34.615 0.00 0.00 45.49 1.28
1954 5977 6.288294 ACCGTCAGAAGCAATAGCATTATTA 58.712 36.000 0.00 0.00 45.49 0.98
1955 5978 5.126067 ACCGTCAGAAGCAATAGCATTATT 58.874 37.500 0.00 0.00 45.49 1.40
1956 5979 4.708177 ACCGTCAGAAGCAATAGCATTAT 58.292 39.130 0.00 0.00 45.49 1.28
1957 5980 4.137116 ACCGTCAGAAGCAATAGCATTA 57.863 40.909 0.00 0.00 45.49 1.90
1958 5981 2.991250 ACCGTCAGAAGCAATAGCATT 58.009 42.857 0.00 0.00 45.49 3.56
1959 5982 2.698855 ACCGTCAGAAGCAATAGCAT 57.301 45.000 0.00 0.00 45.49 3.79
1960 5983 2.734175 CGTACCGTCAGAAGCAATAGCA 60.734 50.000 0.00 0.00 45.49 3.49
1961 5984 1.852895 CGTACCGTCAGAAGCAATAGC 59.147 52.381 0.00 0.00 42.56 2.97
1962 5985 3.146618 ACGTACCGTCAGAAGCAATAG 57.853 47.619 0.00 0.00 33.69 1.73
1974 5997 2.160813 GGCAATTTCAATGACGTACCGT 59.839 45.455 0.00 0.00 45.10 4.83
1975 5998 2.418628 AGGCAATTTCAATGACGTACCG 59.581 45.455 0.00 0.00 0.00 4.02
1976 5999 4.083003 TGAAGGCAATTTCAATGACGTACC 60.083 41.667 0.00 0.00 34.32 3.34
1977 6000 5.041951 TGAAGGCAATTTCAATGACGTAC 57.958 39.130 0.00 0.00 34.32 3.67
1978 6001 5.697473 TTGAAGGCAATTTCAATGACGTA 57.303 34.783 6.27 0.00 40.95 3.57
1979 6002 4.582701 TTGAAGGCAATTTCAATGACGT 57.417 36.364 6.27 0.00 40.95 4.34
1980 6003 5.903764 TTTTGAAGGCAATTTCAATGACG 57.096 34.783 9.98 0.00 44.12 4.35
1981 6004 8.718047 GAAATTTTGAAGGCAATTTCAATGAC 57.282 30.769 12.48 0.00 44.12 3.06
1989 6012 9.571816 TCCTATTTTGAAATTTTGAAGGCAATT 57.428 25.926 0.00 0.00 33.25 2.32
1990 6013 9.002600 GTCCTATTTTGAAATTTTGAAGGCAAT 57.997 29.630 0.00 0.00 33.25 3.56
1991 6014 8.210265 AGTCCTATTTTGAAATTTTGAAGGCAA 58.790 29.630 0.00 0.00 0.00 4.52
1992 6015 7.656948 CAGTCCTATTTTGAAATTTTGAAGGCA 59.343 33.333 0.00 0.00 0.00 4.75
1993 6016 7.657354 ACAGTCCTATTTTGAAATTTTGAAGGC 59.343 33.333 0.00 0.00 0.00 4.35
1994 6017 8.981647 CACAGTCCTATTTTGAAATTTTGAAGG 58.018 33.333 0.00 0.00 0.00 3.46
1995 6018 9.748708 TCACAGTCCTATTTTGAAATTTTGAAG 57.251 29.630 0.00 0.00 0.00 3.02
2004 6027 9.513906 TGACAAATATCACAGTCCTATTTTGAA 57.486 29.630 0.00 0.00 0.00 2.69
2005 6028 9.513906 TTGACAAATATCACAGTCCTATTTTGA 57.486 29.630 0.00 0.00 0.00 2.69
2006 6029 9.559958 GTTGACAAATATCACAGTCCTATTTTG 57.440 33.333 0.00 0.00 0.00 2.44
2007 6030 9.520515 AGTTGACAAATATCACAGTCCTATTTT 57.479 29.630 0.00 0.00 0.00 1.82
2008 6031 8.950210 CAGTTGACAAATATCACAGTCCTATTT 58.050 33.333 0.00 0.00 0.00 1.40
2009 6032 8.103305 ACAGTTGACAAATATCACAGTCCTATT 58.897 33.333 0.00 0.00 0.00 1.73
2010 6033 7.550551 CACAGTTGACAAATATCACAGTCCTAT 59.449 37.037 0.00 0.00 0.00 2.57
2011 6034 6.873605 CACAGTTGACAAATATCACAGTCCTA 59.126 38.462 0.00 0.00 0.00 2.94
2012 6035 5.702670 CACAGTTGACAAATATCACAGTCCT 59.297 40.000 0.00 0.00 0.00 3.85
2013 6036 5.470098 ACACAGTTGACAAATATCACAGTCC 59.530 40.000 0.00 0.00 0.00 3.85
2014 6037 6.365839 CACACAGTTGACAAATATCACAGTC 58.634 40.000 0.00 0.00 0.00 3.51
2015 6038 5.239306 CCACACAGTTGACAAATATCACAGT 59.761 40.000 0.00 0.00 0.00 3.55
2016 6039 5.692814 CCACACAGTTGACAAATATCACAG 58.307 41.667 0.00 0.00 0.00 3.66
2017 6040 4.023279 GCCACACAGTTGACAAATATCACA 60.023 41.667 0.00 0.00 0.00 3.58
2018 6041 4.023279 TGCCACACAGTTGACAAATATCAC 60.023 41.667 0.00 0.00 0.00 3.06
2019 6042 4.140536 TGCCACACAGTTGACAAATATCA 58.859 39.130 0.00 0.00 0.00 2.15
2020 6043 4.726416 CTGCCACACAGTTGACAAATATC 58.274 43.478 0.00 0.00 41.86 1.63
2021 6044 4.771590 CTGCCACACAGTTGACAAATAT 57.228 40.909 0.00 0.00 41.86 1.28
2033 6056 1.755959 AGTTTTGCAATCTGCCACACA 59.244 42.857 0.00 0.00 44.23 3.72
2034 6057 2.514205 AGTTTTGCAATCTGCCACAC 57.486 45.000 0.00 0.00 44.23 3.82
2035 6058 2.295909 GGTAGTTTTGCAATCTGCCACA 59.704 45.455 23.63 0.00 44.23 4.17
2036 6059 2.295909 TGGTAGTTTTGCAATCTGCCAC 59.704 45.455 25.76 12.98 44.23 5.01
2037 6060 2.295909 GTGGTAGTTTTGCAATCTGCCA 59.704 45.455 25.76 25.76 44.23 4.92
2038 6061 2.295909 TGTGGTAGTTTTGCAATCTGCC 59.704 45.455 22.58 22.58 44.23 4.85
2039 6062 3.308530 GTGTGGTAGTTTTGCAATCTGC 58.691 45.455 0.00 5.87 45.29 4.26
2040 6063 3.317711 TGGTGTGGTAGTTTTGCAATCTG 59.682 43.478 0.00 0.00 0.00 2.90
2041 6064 3.317993 GTGGTGTGGTAGTTTTGCAATCT 59.682 43.478 0.00 4.91 0.00 2.40
2042 6065 3.552068 GGTGGTGTGGTAGTTTTGCAATC 60.552 47.826 0.00 0.00 0.00 2.67
2043 6066 2.364002 GGTGGTGTGGTAGTTTTGCAAT 59.636 45.455 0.00 0.00 0.00 3.56
2044 6067 1.751924 GGTGGTGTGGTAGTTTTGCAA 59.248 47.619 0.00 0.00 0.00 4.08
2045 6068 1.394618 GGTGGTGTGGTAGTTTTGCA 58.605 50.000 0.00 0.00 0.00 4.08
2046 6069 0.671796 GGGTGGTGTGGTAGTTTTGC 59.328 55.000 0.00 0.00 0.00 3.68
2047 6070 1.679153 GTGGGTGGTGTGGTAGTTTTG 59.321 52.381 0.00 0.00 0.00 2.44
2048 6071 1.567175 AGTGGGTGGTGTGGTAGTTTT 59.433 47.619 0.00 0.00 0.00 2.43
2049 6072 1.218844 AGTGGGTGGTGTGGTAGTTT 58.781 50.000 0.00 0.00 0.00 2.66
2050 6073 1.142262 GAAGTGGGTGGTGTGGTAGTT 59.858 52.381 0.00 0.00 0.00 2.24
2051 6074 0.763035 GAAGTGGGTGGTGTGGTAGT 59.237 55.000 0.00 0.00 0.00 2.73
2052 6075 1.002087 GAGAAGTGGGTGGTGTGGTAG 59.998 57.143 0.00 0.00 0.00 3.18
2053 6076 1.053424 GAGAAGTGGGTGGTGTGGTA 58.947 55.000 0.00 0.00 0.00 3.25
2054 6077 0.694444 AGAGAAGTGGGTGGTGTGGT 60.694 55.000 0.00 0.00 0.00 4.16
2055 6078 0.035458 GAGAGAAGTGGGTGGTGTGG 59.965 60.000 0.00 0.00 0.00 4.17
2056 6079 1.051812 AGAGAGAAGTGGGTGGTGTG 58.948 55.000 0.00 0.00 0.00 3.82
2057 6080 2.633481 GTTAGAGAGAAGTGGGTGGTGT 59.367 50.000 0.00 0.00 0.00 4.16
2058 6081 2.352814 CGTTAGAGAGAAGTGGGTGGTG 60.353 54.545 0.00 0.00 0.00 4.17
2059 6082 1.893801 CGTTAGAGAGAAGTGGGTGGT 59.106 52.381 0.00 0.00 0.00 4.16
2060 6083 2.168496 TCGTTAGAGAGAAGTGGGTGG 58.832 52.381 0.00 0.00 0.00 4.61
2061 6084 3.936372 TTCGTTAGAGAGAAGTGGGTG 57.064 47.619 0.00 0.00 0.00 4.61
2062 6085 3.128938 CGATTCGTTAGAGAGAAGTGGGT 59.871 47.826 0.00 0.00 0.00 4.51
2063 6086 3.696898 CGATTCGTTAGAGAGAAGTGGG 58.303 50.000 0.00 0.00 0.00 4.61
2064 6087 3.109619 GCGATTCGTTAGAGAGAAGTGG 58.890 50.000 8.03 0.00 0.00 4.00
2065 6088 4.022464 AGCGATTCGTTAGAGAGAAGTG 57.978 45.455 8.03 0.00 0.00 3.16
2066 6089 3.065648 GGAGCGATTCGTTAGAGAGAAGT 59.934 47.826 8.03 0.00 0.00 3.01
2067 6090 3.549221 GGGAGCGATTCGTTAGAGAGAAG 60.549 52.174 8.03 0.00 0.00 2.85
2068 6091 2.358267 GGGAGCGATTCGTTAGAGAGAA 59.642 50.000 8.03 0.00 0.00 2.87
2069 6092 1.948145 GGGAGCGATTCGTTAGAGAGA 59.052 52.381 8.03 0.00 0.00 3.10
2070 6093 1.950909 AGGGAGCGATTCGTTAGAGAG 59.049 52.381 8.03 0.00 0.00 3.20
2071 6094 2.054232 AGGGAGCGATTCGTTAGAGA 57.946 50.000 8.03 0.00 0.00 3.10
2072 6095 2.733517 GAAGGGAGCGATTCGTTAGAG 58.266 52.381 8.03 0.00 0.00 2.43
2073 6096 1.065102 CGAAGGGAGCGATTCGTTAGA 59.935 52.381 8.03 0.00 42.47 2.10
2074 6097 1.065102 TCGAAGGGAGCGATTCGTTAG 59.935 52.381 8.03 0.00 46.34 2.34
2075 6098 1.097232 TCGAAGGGAGCGATTCGTTA 58.903 50.000 8.03 0.00 46.34 3.18
2076 6099 0.460311 ATCGAAGGGAGCGATTCGTT 59.540 50.000 8.03 0.59 45.29 3.85
2077 6100 2.116383 ATCGAAGGGAGCGATTCGT 58.884 52.632 8.03 0.00 45.29 3.85
2082 6105 0.822532 GGTAGGATCGAAGGGAGCGA 60.823 60.000 0.00 0.00 42.48 4.93
2083 6106 0.824182 AGGTAGGATCGAAGGGAGCG 60.824 60.000 0.00 0.00 0.00 5.03
2084 6107 0.963225 GAGGTAGGATCGAAGGGAGC 59.037 60.000 0.00 0.00 0.00 4.70
2085 6108 1.146152 AGGAGGTAGGATCGAAGGGAG 59.854 57.143 0.00 0.00 0.00 4.30
2086 6109 1.145325 GAGGAGGTAGGATCGAAGGGA 59.855 57.143 0.00 0.00 0.00 4.20
2087 6110 1.146152 AGAGGAGGTAGGATCGAAGGG 59.854 57.143 0.00 0.00 0.00 3.95
2088 6111 2.510613 GAGAGGAGGTAGGATCGAAGG 58.489 57.143 0.00 0.00 0.00 3.46
2089 6112 2.147958 CGAGAGGAGGTAGGATCGAAG 58.852 57.143 0.00 0.00 32.13 3.79
2090 6113 1.814634 GCGAGAGGAGGTAGGATCGAA 60.815 57.143 0.00 0.00 32.13 3.71
2091 6114 0.250381 GCGAGAGGAGGTAGGATCGA 60.250 60.000 0.00 0.00 32.13 3.59
2092 6115 1.570347 CGCGAGAGGAGGTAGGATCG 61.570 65.000 0.00 0.00 0.00 3.69
2093 6116 1.238625 CCGCGAGAGGAGGTAGGATC 61.239 65.000 8.23 0.00 0.00 3.36
2094 6117 1.228306 CCGCGAGAGGAGGTAGGAT 60.228 63.158 8.23 0.00 0.00 3.24
2095 6118 2.192443 CCGCGAGAGGAGGTAGGA 59.808 66.667 8.23 0.00 0.00 2.94
2096 6119 2.907917 CCCGCGAGAGGAGGTAGG 60.908 72.222 8.23 0.00 32.98 3.18
2097 6120 3.597728 GCCCGCGAGAGGAGGTAG 61.598 72.222 8.23 0.00 32.98 3.18
2098 6121 4.124943 AGCCCGCGAGAGGAGGTA 62.125 66.667 8.23 0.00 32.98 3.08
2112 6135 4.995594 CCAGAATTGGGAGGAGCC 57.004 61.111 0.00 0.00 41.05 4.70
2120 6143 2.353610 GGTGGCAGCCCAGAATTGG 61.354 63.158 9.64 0.00 43.18 3.16
2121 6144 3.291611 GGTGGCAGCCCAGAATTG 58.708 61.111 9.64 0.00 43.18 2.32
2131 6154 4.410400 GGGGTCGAAGGGTGGCAG 62.410 72.222 0.00 0.00 0.00 4.85
2133 6156 4.717313 GTGGGGTCGAAGGGTGGC 62.717 72.222 0.00 0.00 0.00 5.01
2134 6157 4.029809 GGTGGGGTCGAAGGGTGG 62.030 72.222 0.00 0.00 0.00 4.61
2135 6158 2.928396 AGGTGGGGTCGAAGGGTG 60.928 66.667 0.00 0.00 0.00 4.61
2136 6159 2.606826 GAGGTGGGGTCGAAGGGT 60.607 66.667 0.00 0.00 0.00 4.34
2137 6160 3.400054 GGAGGTGGGGTCGAAGGG 61.400 72.222 0.00 0.00 0.00 3.95
2138 6161 3.400054 GGGAGGTGGGGTCGAAGG 61.400 72.222 0.00 0.00 0.00 3.46
2139 6162 3.400054 GGGGAGGTGGGGTCGAAG 61.400 72.222 0.00 0.00 0.00 3.79
2140 6163 3.918328 GAGGGGAGGTGGGGTCGAA 62.918 68.421 0.00 0.00 0.00 3.71
2141 6164 4.393778 GAGGGGAGGTGGGGTCGA 62.394 72.222 0.00 0.00 0.00 4.20
2143 6166 3.918328 TTCGAGGGGAGGTGGGGTC 62.918 68.421 0.00 0.00 0.00 4.46
2144 6167 3.936566 TTCGAGGGGAGGTGGGGT 61.937 66.667 0.00 0.00 0.00 4.95
2145 6168 3.400054 GTTCGAGGGGAGGTGGGG 61.400 72.222 0.00 0.00 0.00 4.96
2146 6169 1.774894 TTTGTTCGAGGGGAGGTGGG 61.775 60.000 0.00 0.00 0.00 4.61
2147 6170 0.605589 GTTTGTTCGAGGGGAGGTGG 60.606 60.000 0.00 0.00 0.00 4.61
2148 6171 0.605589 GGTTTGTTCGAGGGGAGGTG 60.606 60.000 0.00 0.00 0.00 4.00
2149 6172 1.057851 TGGTTTGTTCGAGGGGAGGT 61.058 55.000 0.00 0.00 0.00 3.85
2150 6173 0.109723 TTGGTTTGTTCGAGGGGAGG 59.890 55.000 0.00 0.00 0.00 4.30
2151 6174 1.202770 AGTTGGTTTGTTCGAGGGGAG 60.203 52.381 0.00 0.00 0.00 4.30
2152 6175 0.841289 AGTTGGTTTGTTCGAGGGGA 59.159 50.000 0.00 0.00 0.00 4.81
2153 6176 1.202770 AGAGTTGGTTTGTTCGAGGGG 60.203 52.381 0.00 0.00 0.00 4.79
2154 6177 1.873591 CAGAGTTGGTTTGTTCGAGGG 59.126 52.381 0.00 0.00 0.00 4.30
2155 6178 2.802816 CTCAGAGTTGGTTTGTTCGAGG 59.197 50.000 0.00 0.00 0.00 4.63
2156 6179 2.802816 CCTCAGAGTTGGTTTGTTCGAG 59.197 50.000 0.00 0.00 0.00 4.04
2157 6180 2.169769 ACCTCAGAGTTGGTTTGTTCGA 59.830 45.455 0.00 0.00 31.62 3.71
2158 6181 2.561569 ACCTCAGAGTTGGTTTGTTCG 58.438 47.619 0.00 0.00 31.62 3.95
2159 6182 3.489229 GCAACCTCAGAGTTGGTTTGTTC 60.489 47.826 6.55 0.00 45.87 3.18
2160 6183 2.427095 GCAACCTCAGAGTTGGTTTGTT 59.573 45.455 6.55 0.00 45.87 2.83
2161 6184 2.024414 GCAACCTCAGAGTTGGTTTGT 58.976 47.619 6.55 0.00 45.87 2.83
2162 6185 1.002468 CGCAACCTCAGAGTTGGTTTG 60.002 52.381 6.55 3.19 45.87 2.93
2163 6186 1.308998 CGCAACCTCAGAGTTGGTTT 58.691 50.000 6.55 0.00 45.87 3.27
2164 6187 0.535102 CCGCAACCTCAGAGTTGGTT 60.535 55.000 6.55 0.00 45.87 3.67
2165 6188 1.071471 CCGCAACCTCAGAGTTGGT 59.929 57.895 6.55 0.00 45.87 3.67
2166 6189 1.672356 CCCGCAACCTCAGAGTTGG 60.672 63.158 6.55 0.00 45.87 3.77
2168 6191 2.113243 GACCCCGCAACCTCAGAGTT 62.113 60.000 0.00 0.00 0.00 3.01
2169 6192 2.526873 ACCCCGCAACCTCAGAGT 60.527 61.111 0.00 0.00 0.00 3.24
2170 6193 2.266055 GACCCCGCAACCTCAGAG 59.734 66.667 0.00 0.00 0.00 3.35
2171 6194 3.319198 GGACCCCGCAACCTCAGA 61.319 66.667 0.00 0.00 0.00 3.27
2172 6195 2.876368 GATGGACCCCGCAACCTCAG 62.876 65.000 0.00 0.00 0.00 3.35
2173 6196 2.933287 ATGGACCCCGCAACCTCA 60.933 61.111 0.00 0.00 0.00 3.86
2174 6197 2.124695 GATGGACCCCGCAACCTC 60.125 66.667 0.00 0.00 0.00 3.85
2175 6198 3.728373 GGATGGACCCCGCAACCT 61.728 66.667 0.00 0.00 0.00 3.50
2177 6200 2.886730 AATCGGATGGACCCCGCAAC 62.887 60.000 4.41 0.00 46.10 4.17
2178 6201 2.204865 AAATCGGATGGACCCCGCAA 62.205 55.000 4.41 0.00 46.10 4.85
2179 6202 2.204865 AAAATCGGATGGACCCCGCA 62.205 55.000 4.41 0.00 46.10 5.69
2180 6203 1.444917 GAAAATCGGATGGACCCCGC 61.445 60.000 4.41 0.00 46.10 6.13
2182 6205 1.680338 CAGAAAATCGGATGGACCCC 58.320 55.000 0.00 0.00 34.64 4.95
2183 6206 1.680338 CCAGAAAATCGGATGGACCC 58.320 55.000 0.00 0.00 34.60 4.46
2184 6207 1.064685 ACCCAGAAAATCGGATGGACC 60.065 52.381 0.00 0.00 34.60 4.46
2185 6208 2.420058 ACCCAGAAAATCGGATGGAC 57.580 50.000 0.00 0.00 34.60 4.02
2186 6209 3.112263 ACTACCCAGAAAATCGGATGGA 58.888 45.455 0.00 0.00 34.60 3.41
2187 6210 3.118408 TGACTACCCAGAAAATCGGATGG 60.118 47.826 0.00 0.00 0.00 3.51
2188 6211 4.122776 CTGACTACCCAGAAAATCGGATG 58.877 47.826 0.00 0.00 36.29 3.51
2189 6212 3.432326 GCTGACTACCCAGAAAATCGGAT 60.432 47.826 0.00 0.00 36.29 4.18
2190 6213 2.093658 GCTGACTACCCAGAAAATCGGA 60.094 50.000 0.00 0.00 36.29 4.55
2191 6214 2.093447 AGCTGACTACCCAGAAAATCGG 60.093 50.000 0.00 0.00 36.29 4.18
2192 6215 3.252974 AGCTGACTACCCAGAAAATCG 57.747 47.619 0.00 0.00 36.29 3.34
2193 6216 8.732746 TTAAATAGCTGACTACCCAGAAAATC 57.267 34.615 0.00 0.00 36.29 2.17
2194 6217 9.528489 TTTTAAATAGCTGACTACCCAGAAAAT 57.472 29.630 0.00 0.00 36.29 1.82
2195 6218 8.927675 TTTTAAATAGCTGACTACCCAGAAAA 57.072 30.769 0.00 0.00 36.29 2.29
2196 6219 8.927675 TTTTTAAATAGCTGACTACCCAGAAA 57.072 30.769 0.00 0.00 36.29 2.52
2198 6221 9.832445 CTATTTTTAAATAGCTGACTACCCAGA 57.168 33.333 8.78 0.00 40.79 3.86
2199 6222 9.057089 CCTATTTTTAAATAGCTGACTACCCAG 57.943 37.037 14.10 0.00 44.07 4.45
2200 6223 7.501225 GCCTATTTTTAAATAGCTGACTACCCA 59.499 37.037 14.10 0.00 44.07 4.51
2201 6224 7.501225 TGCCTATTTTTAAATAGCTGACTACCC 59.499 37.037 14.10 0.00 44.07 3.69
2202 6225 8.446599 TGCCTATTTTTAAATAGCTGACTACC 57.553 34.615 14.10 0.42 44.07 3.18
2228 6251 6.107901 TCGATCCACCATTTTTCCATTTTT 57.892 33.333 0.00 0.00 0.00 1.94
2229 6252 5.736951 TCGATCCACCATTTTTCCATTTT 57.263 34.783 0.00 0.00 0.00 1.82
2230 6253 5.478407 GTTCGATCCACCATTTTTCCATTT 58.522 37.500 0.00 0.00 0.00 2.32
2231 6254 4.081697 GGTTCGATCCACCATTTTTCCATT 60.082 41.667 7.68 0.00 34.04 3.16
2232 6255 3.447229 GGTTCGATCCACCATTTTTCCAT 59.553 43.478 7.68 0.00 34.04 3.41
2233 6256 2.823154 GGTTCGATCCACCATTTTTCCA 59.177 45.455 7.68 0.00 34.04 3.53
2234 6257 2.165641 GGGTTCGATCCACCATTTTTCC 59.834 50.000 14.36 0.00 35.80 3.13
2235 6258 2.823154 TGGGTTCGATCCACCATTTTTC 59.177 45.455 14.36 0.00 35.80 2.29
2236 6259 2.560981 GTGGGTTCGATCCACCATTTTT 59.439 45.455 21.20 0.00 46.58 1.94
2237 6260 2.167662 GTGGGTTCGATCCACCATTTT 58.832 47.619 21.20 0.00 46.58 1.82
2238 6261 1.834188 GTGGGTTCGATCCACCATTT 58.166 50.000 21.20 0.00 46.58 2.32
2239 6262 3.569873 GTGGGTTCGATCCACCATT 57.430 52.632 21.20 0.00 46.58 3.16
2244 6267 2.162338 GACGGTGTGGGTTCGATCCA 62.162 60.000 14.36 9.18 0.00 3.41
2245 6268 1.447314 GACGGTGTGGGTTCGATCC 60.447 63.158 3.76 3.76 0.00 3.36
2246 6269 1.012486 GTGACGGTGTGGGTTCGATC 61.012 60.000 0.00 0.00 0.00 3.69
2247 6270 1.005394 GTGACGGTGTGGGTTCGAT 60.005 57.895 0.00 0.00 0.00 3.59
2248 6271 1.750341 ATGTGACGGTGTGGGTTCGA 61.750 55.000 0.00 0.00 0.00 3.71
2249 6272 0.038067 TATGTGACGGTGTGGGTTCG 60.038 55.000 0.00 0.00 0.00 3.95
2250 6273 2.396590 ATATGTGACGGTGTGGGTTC 57.603 50.000 0.00 0.00 0.00 3.62
2251 6274 4.080807 TCAATATATGTGACGGTGTGGGTT 60.081 41.667 0.00 0.00 0.00 4.11
2252 6275 3.452990 TCAATATATGTGACGGTGTGGGT 59.547 43.478 0.00 0.00 0.00 4.51
2253 6276 4.066646 TCAATATATGTGACGGTGTGGG 57.933 45.455 0.00 0.00 0.00 4.61
2254 6277 5.527214 ACATTCAATATATGTGACGGTGTGG 59.473 40.000 0.00 0.00 35.03 4.17
2255 6278 6.603237 ACATTCAATATATGTGACGGTGTG 57.397 37.500 0.00 0.00 35.03 3.82
2256 6279 8.773645 CATTACATTCAATATATGTGACGGTGT 58.226 33.333 0.00 2.02 36.89 4.16
2257 6280 8.987890 TCATTACATTCAATATATGTGACGGTG 58.012 33.333 0.00 0.00 36.89 4.94
2258 6281 8.988934 GTCATTACATTCAATATATGTGACGGT 58.011 33.333 0.00 0.00 36.89 4.83
2259 6282 8.987890 TGTCATTACATTCAATATATGTGACGG 58.012 33.333 0.00 0.00 36.89 4.79
2273 6296 5.704515 AGCATAGCTGGATGTCATTACATTC 59.295 40.000 0.00 0.00 41.31 2.67
2274 6297 5.628130 AGCATAGCTGGATGTCATTACATT 58.372 37.500 0.00 0.00 41.31 2.71
2275 6298 5.238624 AGCATAGCTGGATGTCATTACAT 57.761 39.130 0.00 0.00 42.86 2.29
2276 6299 4.694760 AGCATAGCTGGATGTCATTACA 57.305 40.909 0.00 0.00 37.57 2.41
2296 6319 8.613060 TGAATCTAATCAATAAAGCTGGCTAG 57.387 34.615 0.00 0.00 0.00 3.42
2297 6320 8.978874 TTGAATCTAATCAATAAAGCTGGCTA 57.021 30.769 0.00 0.00 34.50 3.93
2298 6321 7.886629 TTGAATCTAATCAATAAAGCTGGCT 57.113 32.000 0.00 0.00 34.50 4.75
2323 6346 9.911138 CTCAAGTAGATACATCTAGTACGTAGA 57.089 37.037 6.95 0.00 41.06 2.59
2324 6347 9.911138 TCTCAAGTAGATACATCTAGTACGTAG 57.089 37.037 6.95 0.00 41.06 3.51
2326 6349 9.210329 CATCTCAAGTAGATACATCTAGTACGT 57.790 37.037 6.95 0.00 43.42 3.57
2327 6350 9.425577 TCATCTCAAGTAGATACATCTAGTACG 57.574 37.037 6.95 3.19 43.42 3.67
2364 6387 6.827586 TCAGTTACTGTTGGTTGTCTTTTT 57.172 33.333 12.41 0.00 32.61 1.94
2365 6388 6.827586 TTCAGTTACTGTTGGTTGTCTTTT 57.172 33.333 12.41 0.00 32.61 2.27
2366 6389 6.827586 TTTCAGTTACTGTTGGTTGTCTTT 57.172 33.333 12.41 0.00 32.61 2.52
2367 6390 6.827586 TTTTCAGTTACTGTTGGTTGTCTT 57.172 33.333 12.41 0.00 32.61 3.01
2368 6391 6.039382 GGATTTTCAGTTACTGTTGGTTGTCT 59.961 38.462 12.41 0.00 32.61 3.41
2369 6392 6.183360 TGGATTTTCAGTTACTGTTGGTTGTC 60.183 38.462 12.41 3.48 32.61 3.18
2370 6393 5.654650 TGGATTTTCAGTTACTGTTGGTTGT 59.345 36.000 12.41 0.00 32.61 3.32
2371 6394 6.142818 TGGATTTTCAGTTACTGTTGGTTG 57.857 37.500 12.41 0.00 32.61 3.77
2372 6395 6.783708 TTGGATTTTCAGTTACTGTTGGTT 57.216 33.333 12.41 0.00 32.61 3.67
2373 6396 6.783708 TTTGGATTTTCAGTTACTGTTGGT 57.216 33.333 12.41 0.00 32.61 3.67
2374 6397 7.010091 GTGTTTTGGATTTTCAGTTACTGTTGG 59.990 37.037 12.41 0.00 32.61 3.77
2375 6398 7.010091 GGTGTTTTGGATTTTCAGTTACTGTTG 59.990 37.037 12.41 0.00 32.61 3.33
2376 6399 7.039270 GGTGTTTTGGATTTTCAGTTACTGTT 58.961 34.615 12.41 0.00 32.61 3.16
2377 6400 6.153680 TGGTGTTTTGGATTTTCAGTTACTGT 59.846 34.615 12.41 0.00 32.61 3.55
2378 6401 6.568869 TGGTGTTTTGGATTTTCAGTTACTG 58.431 36.000 5.94 5.94 0.00 2.74
2379 6402 6.682861 GCTGGTGTTTTGGATTTTCAGTTACT 60.683 38.462 0.00 0.00 0.00 2.24
2380 6403 5.462068 GCTGGTGTTTTGGATTTTCAGTTAC 59.538 40.000 0.00 0.00 0.00 2.50
2381 6404 5.596845 GCTGGTGTTTTGGATTTTCAGTTA 58.403 37.500 0.00 0.00 0.00 2.24
2382 6405 4.441792 GCTGGTGTTTTGGATTTTCAGTT 58.558 39.130 0.00 0.00 0.00 3.16
2383 6406 4.058721 GCTGGTGTTTTGGATTTTCAGT 57.941 40.909 0.00 0.00 0.00 3.41



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.