Multiple sequence alignment - TraesCS1A01G342000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G342000 chr1A 100.000 3092 0 0 1 3092 531366030 531369121 0.000000e+00 5710.0
1 TraesCS1A01G342000 chr1A 90.650 1401 78 29 980 2345 531513135 531514517 0.000000e+00 1812.0
2 TraesCS1A01G342000 chr1A 89.230 1402 96 34 980 2345 531561964 531563346 0.000000e+00 1701.0
3 TraesCS1A01G342000 chr1A 97.732 485 10 1 2609 3092 49970299 49969815 0.000000e+00 833.0
4 TraesCS1A01G342000 chr1A 85.330 409 20 21 2189 2576 531515020 531515409 1.340000e-103 387.0
5 TraesCS1A01G342000 chr1A 93.793 145 5 4 108 249 531501736 531501879 6.720000e-52 215.0
6 TraesCS1A01G342000 chr1A 89.865 148 10 3 105 248 531561211 531561357 5.270000e-43 185.0
7 TraesCS1A01G342000 chr1A 88.889 135 11 2 506 640 531510307 531510437 2.470000e-36 163.0
8 TraesCS1A01G342000 chr1D 90.300 2598 130 51 8 2566 433059621 433062135 0.000000e+00 3290.0
9 TraesCS1A01G342000 chr1D 91.955 1243 68 12 965 2192 433092606 433093831 0.000000e+00 1712.0
10 TraesCS1A01G342000 chr1D 79.150 494 89 11 2609 3092 388964870 388965359 2.300000e-86 329.0
11 TraesCS1A01G342000 chr1D 87.293 181 16 4 11 191 433127211 433127384 1.880000e-47 200.0
12 TraesCS1A01G342000 chr1D 91.724 145 8 4 108 249 433091820 433091963 6.760000e-47 198.0
13 TraesCS1A01G342000 chr1D 87.730 163 7 6 2448 2607 433062200 433062352 8.810000e-41 178.0
14 TraesCS1A01G342000 chr1D 84.615 130 10 6 696 815 433140771 433140900 1.510000e-23 121.0
15 TraesCS1A01G342000 chr1D 89.552 67 5 2 11 75 433091751 433091817 1.980000e-12 84.2
16 TraesCS1A01G342000 chr1B 89.785 1674 96 32 862 2478 584620283 584621938 0.000000e+00 2074.0
17 TraesCS1A01G342000 chr1B 85.700 2042 159 62 538 2478 584603295 584605304 0.000000e+00 2032.0
18 TraesCS1A01G342000 chr1B 89.895 1623 89 29 862 2427 584574922 584576526 0.000000e+00 2019.0
19 TraesCS1A01G342000 chr1B 85.544 2013 170 60 538 2458 584653729 584655712 0.000000e+00 1993.0
20 TraesCS1A01G342000 chr1B 89.191 1434 72 29 953 2345 584779288 584780679 0.000000e+00 1712.0
21 TraesCS1A01G342000 chr1B 89.030 1422 80 28 961 2345 584798089 584799471 0.000000e+00 1692.0
22 TraesCS1A01G342000 chr1B 91.461 972 58 10 1525 2478 584566230 584567194 0.000000e+00 1312.0
23 TraesCS1A01G342000 chr1B 94.503 473 26 0 2620 3092 519642611 519642139 0.000000e+00 730.0
24 TraesCS1A01G342000 chr1B 87.113 582 32 14 1 581 584563627 584564166 1.220000e-173 619.0
25 TraesCS1A01G342000 chr1B 87.113 582 32 14 1 581 584652341 584652880 1.220000e-173 619.0
26 TraesCS1A01G342000 chr1B 92.748 262 12 3 9 266 584601687 584601945 3.770000e-99 372.0
27 TraesCS1A01G342000 chr1B 87.634 186 16 3 11 196 584874776 584874954 3.120000e-50 209.0
28 TraesCS1A01G342000 chr1B 87.634 186 16 3 11 196 584901179 584901357 3.120000e-50 209.0
29 TraesCS1A01G342000 chr1B 87.903 124 13 1 517 640 584875367 584875488 8.940000e-31 145.0
30 TraesCS1A01G342000 chr1B 87.903 124 13 1 517 640 584901770 584901891 8.940000e-31 145.0
31 TraesCS1A01G342000 chr1B 82.099 162 15 12 138 292 584602306 584602460 3.240000e-25 126.0
32 TraesCS1A01G342000 chr1B 82.099 162 15 12 138 292 584602690 584602844 3.240000e-25 126.0
33 TraesCS1A01G342000 chr1B 97.561 41 1 0 2567 2607 584567483 584567523 1.540000e-08 71.3
34 TraesCS1A01G342000 chr1B 97.561 41 1 0 2567 2607 584605593 584605633 1.540000e-08 71.3
35 TraesCS1A01G342000 chr3B 86.924 1453 128 35 862 2283 647944046 647942625 0.000000e+00 1574.0
36 TraesCS1A01G342000 chr3B 84.544 647 66 20 862 1499 647969453 647968832 7.330000e-171 610.0
37 TraesCS1A01G342000 chr3B 80.483 497 79 13 2608 3092 542127035 542127525 6.300000e-97 364.0
38 TraesCS1A01G342000 chr3A 86.837 1451 130 32 861 2283 628220340 628218923 0.000000e+00 1565.0
39 TraesCS1A01G342000 chr3D 88.915 1272 105 18 1035 2283 485232398 485231140 0.000000e+00 1535.0
40 TraesCS1A01G342000 chr7A 97.930 483 10 0 2610 3092 299256143 299255661 0.000000e+00 837.0
41 TraesCS1A01G342000 chr7A 94.549 477 26 0 2616 3092 296570553 296571029 0.000000e+00 737.0
42 TraesCS1A01G342000 chr2A 93.595 484 30 1 2609 3092 594583216 594583698 0.000000e+00 721.0
43 TraesCS1A01G342000 chr2A 81.905 105 9 7 545 649 779164774 779164680 2.560000e-11 80.5
44 TraesCS1A01G342000 chr6A 84.848 561 68 9 961 1518 616689143 616688597 1.620000e-152 549.0
45 TraesCS1A01G342000 chr7B 84.926 471 63 2 2620 3082 627608175 627608645 1.300000e-128 470.0
46 TraesCS1A01G342000 chr6B 87.115 357 43 3 2611 2966 691996882 691996528 4.800000e-108 401.0
47 TraesCS1A01G342000 chr7D 90.000 50 1 1 586 631 54310133 54310182 9.260000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G342000 chr1A 531366030 531369121 3091 False 5710.000000 5710 100.000000 1 3092 1 chr1A.!!$F1 3091
1 TraesCS1A01G342000 chr1A 531561211 531563346 2135 False 943.000000 1701 89.547500 105 2345 2 chr1A.!!$F4 2240
2 TraesCS1A01G342000 chr1A 531510307 531515409 5102 False 787.333333 1812 88.289667 506 2576 3 chr1A.!!$F3 2070
3 TraesCS1A01G342000 chr1D 433059621 433062352 2731 False 1734.000000 3290 89.015000 8 2607 2 chr1D.!!$F4 2599
4 TraesCS1A01G342000 chr1D 433091751 433093831 2080 False 664.733333 1712 91.077000 11 2192 3 chr1D.!!$F5 2181
5 TraesCS1A01G342000 chr1B 584620283 584621938 1655 False 2074.000000 2074 89.785000 862 2478 1 chr1B.!!$F2 1616
6 TraesCS1A01G342000 chr1B 584574922 584576526 1604 False 2019.000000 2019 89.895000 862 2427 1 chr1B.!!$F1 1565
7 TraesCS1A01G342000 chr1B 584779288 584780679 1391 False 1712.000000 1712 89.191000 953 2345 1 chr1B.!!$F3 1392
8 TraesCS1A01G342000 chr1B 584798089 584799471 1382 False 1692.000000 1692 89.030000 961 2345 1 chr1B.!!$F4 1384
9 TraesCS1A01G342000 chr1B 584652341 584655712 3371 False 1306.000000 1993 86.328500 1 2458 2 chr1B.!!$F7 2457
10 TraesCS1A01G342000 chr1B 584563627 584567523 3896 False 667.433333 1312 92.045000 1 2607 3 chr1B.!!$F5 2606
11 TraesCS1A01G342000 chr1B 584601687 584605633 3946 False 545.460000 2032 88.041400 9 2607 5 chr1B.!!$F6 2598
12 TraesCS1A01G342000 chr3B 647942625 647944046 1421 True 1574.000000 1574 86.924000 862 2283 1 chr3B.!!$R1 1421
13 TraesCS1A01G342000 chr3B 647968832 647969453 621 True 610.000000 610 84.544000 862 1499 1 chr3B.!!$R2 637
14 TraesCS1A01G342000 chr3A 628218923 628220340 1417 True 1565.000000 1565 86.837000 861 2283 1 chr3A.!!$R1 1422
15 TraesCS1A01G342000 chr3D 485231140 485232398 1258 True 1535.000000 1535 88.915000 1035 2283 1 chr3D.!!$R1 1248
16 TraesCS1A01G342000 chr6A 616688597 616689143 546 True 549.000000 549 84.848000 961 1518 1 chr6A.!!$R1 557

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
223 243 0.171903 GCTTCCTGGAGCGTACGTAA 59.828 55.0 17.9 0.0 32.23 3.18 F
1341 5957 0.674895 GCTGTGATGCTTCCGTCCTT 60.675 55.0 0.0 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1833 6464 0.884704 GTGTCACCACGTCCTGCATT 60.885 55.0 0.0 0.0 0.00 3.56 R
2953 8545 0.036732 TTGCTCACATGGACACCTCC 59.963 55.0 0.0 0.0 37.04 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 3.179265 CACGCTAACTGTCGGCCG 61.179 66.667 22.12 22.12 0.00 6.13
47 48 4.430765 ACGCTAACTGTCGGCCGG 62.431 66.667 27.83 12.37 0.00 6.13
48 49 4.430765 CGCTAACTGTCGGCCGGT 62.431 66.667 27.83 13.15 0.00 5.28
49 50 2.047560 GCTAACTGTCGGCCGGTT 60.048 61.111 27.83 23.04 44.85 4.44
50 51 2.098831 GCTAACTGTCGGCCGGTTC 61.099 63.158 27.83 16.50 41.81 3.62
51 52 1.804326 CTAACTGTCGGCCGGTTCG 60.804 63.158 27.83 13.72 41.81 3.95
52 53 3.919973 TAACTGTCGGCCGGTTCGC 62.920 63.158 27.83 11.19 41.81 4.70
81 98 4.463879 CACAGCCCTCAGCCCTCG 62.464 72.222 0.00 0.00 45.47 4.63
124 141 3.054878 ACGTCAGGTTAGCTTTAACGTG 58.945 45.455 13.46 13.46 43.31 4.49
197 214 3.587797 AGAGACGACGCAATTAAAGGA 57.412 42.857 0.00 0.00 0.00 3.36
223 243 0.171903 GCTTCCTGGAGCGTACGTAA 59.828 55.000 17.90 0.00 32.23 3.18
224 244 1.798079 GCTTCCTGGAGCGTACGTAAG 60.798 57.143 17.90 3.97 36.64 2.34
225 245 4.340817 GCTTCCTGGAGCGTACGTAAGT 62.341 54.545 17.90 0.00 43.39 2.24
242 264 1.461559 AGTAGTACGTCTCACCTGCC 58.538 55.000 0.00 0.00 0.00 4.85
258 284 1.814394 CTGCCAAAAGCTCATACTGCA 59.186 47.619 0.00 0.00 44.23 4.41
266 292 6.309737 CCAAAAGCTCATACTGCATTTCTTTC 59.690 38.462 0.00 0.00 30.45 2.62
267 293 6.579666 AAAGCTCATACTGCATTTCTTTCA 57.420 33.333 0.00 0.00 0.00 2.69
269 295 5.005740 AGCTCATACTGCATTTCTTTCACA 58.994 37.500 0.00 0.00 0.00 3.58
336 877 2.489971 TGAAGTGGAAATTTCTCGCGT 58.510 42.857 17.42 11.93 0.00 6.01
358 899 7.317269 CGCGTTGGAAGTATATTTATTCGTTTC 59.683 37.037 0.00 0.00 0.00 2.78
360 901 9.845305 CGTTGGAAGTATATTTATTCGTTTCTC 57.155 33.333 0.00 0.00 0.00 2.87
361 902 9.845305 GTTGGAAGTATATTTATTCGTTTCTCG 57.155 33.333 0.00 0.00 41.41 4.04
362 903 8.068893 TGGAAGTATATTTATTCGTTTCTCGC 57.931 34.615 0.00 0.00 39.67 5.03
461 1383 1.004679 GACCGGAAAACCAGGCGTA 60.005 57.895 9.46 0.00 0.00 4.42
462 1384 1.293963 GACCGGAAAACCAGGCGTAC 61.294 60.000 9.46 0.00 0.00 3.67
463 1385 2.385091 CCGGAAAACCAGGCGTACG 61.385 63.158 11.84 11.84 0.00 3.67
464 1386 1.665599 CGGAAAACCAGGCGTACGT 60.666 57.895 17.90 0.00 0.00 3.57
593 2657 2.309528 TGACCGGTTCATACATCAGC 57.690 50.000 9.42 0.00 0.00 4.26
650 2717 3.522553 CTGCTAGCTGTTGGTTACTACC 58.477 50.000 17.23 0.00 45.26 3.18
671 2738 8.342634 ACTACCAAATATTTGTGTATCATTCGC 58.657 33.333 23.24 0.00 36.45 4.70
672 2739 7.094508 ACCAAATATTTGTGTATCATTCGCA 57.905 32.000 23.24 0.00 36.45 5.10
673 2740 7.542890 ACCAAATATTTGTGTATCATTCGCAA 58.457 30.769 23.24 0.00 36.45 4.85
674 2741 8.031864 ACCAAATATTTGTGTATCATTCGCAAA 58.968 29.630 23.24 5.57 45.05 3.68
675 2742 8.867935 CCAAATATTTGTGTATCATTCGCAAAA 58.132 29.630 23.24 0.00 44.46 2.44
751 5238 4.555709 TTTCGCGCCACTGGGTGT 62.556 61.111 0.00 0.00 46.76 4.16
802 5316 3.440173 CAGTAACGTTCCAATGAAGCCAT 59.560 43.478 2.82 0.00 33.66 4.40
847 5362 2.434336 ACACATGCCGACCTATGTATGT 59.566 45.455 0.00 0.00 38.15 2.29
850 5365 4.864806 CACATGCCGACCTATGTATGTATC 59.135 45.833 0.00 0.00 35.94 2.24
853 5368 4.925836 TGCCGACCTATGTATGTATCCTA 58.074 43.478 0.00 0.00 0.00 2.94
904 5448 2.860582 GCTCGAGCTATAGCAACAGACC 60.861 54.545 29.88 7.67 45.16 3.85
932 5491 3.862267 CGATCGAGCACTTCTCAGATTTT 59.138 43.478 10.26 0.00 41.98 1.82
936 5495 5.965922 TCGAGCACTTCTCAGATTTTATCA 58.034 37.500 0.00 0.00 41.98 2.15
983 5567 1.470098 GCAAGCAAGCAAGCTAGCTAA 59.530 47.619 19.70 0.00 45.89 3.09
1008 5592 2.223805 CCAAGAAATAGAAATGGCGGCC 60.224 50.000 13.32 13.32 0.00 6.13
1169 5753 4.247380 GGAGCAGGCCATCTCCGG 62.247 72.222 22.49 0.00 39.43 5.14
1235 5821 4.787598 GACTGTTTCGTCGAGGTACTTAA 58.212 43.478 4.85 0.00 41.55 1.85
1246 5840 5.407387 GTCGAGGTACTTAATGCAAGAAACA 59.593 40.000 0.00 0.00 41.55 2.83
1341 5957 0.674895 GCTGTGATGCTTCCGTCCTT 60.675 55.000 0.00 0.00 0.00 3.36
1371 5988 4.473520 CCATTCAGCCCGACGCCT 62.474 66.667 0.00 0.00 38.78 5.52
1530 6158 1.000521 CATCCTCAGCAGGGGCAAA 60.001 57.895 0.00 0.00 44.61 3.68
1549 6177 2.403252 AGTAAACTTCCAGATGCCGG 57.597 50.000 0.00 0.00 0.00 6.13
1833 6464 2.580276 GGCAATGACCCGACGGTA 59.420 61.111 13.94 0.00 44.88 4.02
1851 6482 0.682292 TAATGCAGGACGTGGTGACA 59.318 50.000 0.00 0.00 38.70 3.58
2064 6695 0.846427 ACCAGGGCCAGATCAGGAAA 60.846 55.000 8.61 0.00 0.00 3.13
2076 6707 4.025401 AGGAAAAACTGCCGCGCG 62.025 61.111 25.67 25.67 0.00 6.86
2210 6874 8.707839 CATGTTGTAAAATTTGGCGATACTTTT 58.292 29.630 0.00 0.00 0.00 2.27
2211 6875 8.066668 TGTTGTAAAATTTGGCGATACTTTTG 57.933 30.769 0.00 0.00 0.00 2.44
2283 7653 3.863424 AGCTACGGAATTGTTCGTGTATG 59.137 43.478 7.93 0.03 40.05 2.39
2285 7655 4.092383 GCTACGGAATTGTTCGTGTATGTT 59.908 41.667 7.93 0.00 40.05 2.71
2286 7656 5.390145 GCTACGGAATTGTTCGTGTATGTTT 60.390 40.000 7.93 0.00 40.05 2.83
2369 7760 6.820656 TGAACAGAAAAAGATCTAGGATGCTC 59.179 38.462 0.00 0.00 0.00 4.26
2386 7777 1.278413 GCTCCCGAAAACCTACTCCTT 59.722 52.381 0.00 0.00 0.00 3.36
2393 7784 6.213195 TCCCGAAAACCTACTCCTTAATTACA 59.787 38.462 0.00 0.00 0.00 2.41
2394 7785 7.052248 CCCGAAAACCTACTCCTTAATTACAT 58.948 38.462 0.00 0.00 0.00 2.29
2395 7786 7.226128 CCCGAAAACCTACTCCTTAATTACATC 59.774 40.741 0.00 0.00 0.00 3.06
2516 8076 5.952347 AGGAACGAACAAAGGGACTATAT 57.048 39.130 0.00 0.00 38.49 0.86
2612 8204 7.766219 GCATGTCTGCTAATGATCAATTTTT 57.234 32.000 0.00 0.00 45.32 1.94
2633 8225 4.413495 TTTTTCGAAACGGAGGCATAAG 57.587 40.909 10.79 0.00 0.00 1.73
2634 8226 3.322211 TTTCGAAACGGAGGCATAAGA 57.678 42.857 6.47 0.00 0.00 2.10
2635 8227 3.536956 TTCGAAACGGAGGCATAAGAT 57.463 42.857 0.00 0.00 0.00 2.40
2636 8228 3.536956 TCGAAACGGAGGCATAAGATT 57.463 42.857 0.00 0.00 0.00 2.40
2637 8229 3.869065 TCGAAACGGAGGCATAAGATTT 58.131 40.909 0.00 0.00 0.00 2.17
2638 8230 3.621268 TCGAAACGGAGGCATAAGATTTG 59.379 43.478 0.00 0.00 0.00 2.32
2639 8231 3.695816 GAAACGGAGGCATAAGATTTGC 58.304 45.455 0.00 0.00 39.41 3.68
2649 8241 5.464030 GCATAAGATTTGCCTCATCCATT 57.536 39.130 0.00 0.00 33.95 3.16
2650 8242 5.227908 GCATAAGATTTGCCTCATCCATTG 58.772 41.667 0.00 0.00 33.95 2.82
2651 8243 5.010314 GCATAAGATTTGCCTCATCCATTGA 59.990 40.000 0.00 0.00 33.95 2.57
2652 8244 6.461927 GCATAAGATTTGCCTCATCCATTGAA 60.462 38.462 0.00 0.00 32.78 2.69
2653 8245 7.667557 CATAAGATTTGCCTCATCCATTGAAT 58.332 34.615 0.00 0.00 32.78 2.57
2654 8246 8.799367 CATAAGATTTGCCTCATCCATTGAATA 58.201 33.333 0.00 0.00 32.78 1.75
2655 8247 7.664552 AAGATTTGCCTCATCCATTGAATAA 57.335 32.000 0.00 0.00 32.78 1.40
2656 8248 7.286215 AGATTTGCCTCATCCATTGAATAAG 57.714 36.000 0.00 0.00 32.78 1.73
2657 8249 7.064866 AGATTTGCCTCATCCATTGAATAAGA 58.935 34.615 0.00 0.00 32.78 2.10
2658 8250 7.562454 AGATTTGCCTCATCCATTGAATAAGAA 59.438 33.333 0.00 0.00 32.78 2.52
2659 8251 6.704289 TTGCCTCATCCATTGAATAAGAAG 57.296 37.500 0.00 0.00 32.78 2.85
2660 8252 6.005066 TGCCTCATCCATTGAATAAGAAGA 57.995 37.500 0.00 0.00 32.78 2.87
2661 8253 6.060136 TGCCTCATCCATTGAATAAGAAGAG 58.940 40.000 3.84 3.84 32.78 2.85
2662 8254 6.126681 TGCCTCATCCATTGAATAAGAAGAGA 60.127 38.462 9.75 0.00 32.78 3.10
2663 8255 6.427547 GCCTCATCCATTGAATAAGAAGAGAG 59.572 42.308 9.75 5.29 32.78 3.20
2664 8256 7.507829 CCTCATCCATTGAATAAGAAGAGAGT 58.492 38.462 9.75 0.00 32.78 3.24
2665 8257 7.992033 CCTCATCCATTGAATAAGAAGAGAGTT 59.008 37.037 9.75 0.00 32.78 3.01
2666 8258 9.393512 CTCATCCATTGAATAAGAAGAGAGTTT 57.606 33.333 4.52 0.00 32.78 2.66
2671 8263 9.883142 CCATTGAATAAGAAGAGAGTTTAGAGT 57.117 33.333 0.00 0.00 0.00 3.24
2679 8271 7.222000 AGAAGAGAGTTTAGAGTGTTACAGG 57.778 40.000 0.00 0.00 0.00 4.00
2680 8272 6.778559 AGAAGAGAGTTTAGAGTGTTACAGGT 59.221 38.462 0.00 0.00 0.00 4.00
2681 8273 6.334102 AGAGAGTTTAGAGTGTTACAGGTG 57.666 41.667 0.00 0.00 0.00 4.00
2682 8274 6.069331 AGAGAGTTTAGAGTGTTACAGGTGA 58.931 40.000 0.00 0.00 0.00 4.02
2683 8275 6.016108 AGAGAGTTTAGAGTGTTACAGGTGAC 60.016 42.308 0.00 0.00 0.00 3.67
2684 8276 5.010820 AGAGTTTAGAGTGTTACAGGTGACC 59.989 44.000 0.00 0.00 0.00 4.02
2685 8277 4.040095 AGTTTAGAGTGTTACAGGTGACCC 59.960 45.833 0.00 0.00 0.00 4.46
2686 8278 2.097110 AGAGTGTTACAGGTGACCCA 57.903 50.000 0.00 0.00 0.00 4.51
2687 8279 1.692519 AGAGTGTTACAGGTGACCCAC 59.307 52.381 0.00 0.00 0.00 4.61
2688 8280 1.414919 GAGTGTTACAGGTGACCCACA 59.585 52.381 9.95 0.91 35.86 4.17
2689 8281 2.038557 GAGTGTTACAGGTGACCCACAT 59.961 50.000 9.95 0.00 35.86 3.21
2690 8282 3.244582 AGTGTTACAGGTGACCCACATA 58.755 45.455 9.95 0.00 35.86 2.29
2691 8283 3.007614 AGTGTTACAGGTGACCCACATAC 59.992 47.826 9.95 0.00 35.86 2.39
2692 8284 2.973406 TGTTACAGGTGACCCACATACA 59.027 45.455 0.00 0.00 35.86 2.29
2693 8285 3.244284 TGTTACAGGTGACCCACATACAC 60.244 47.826 0.00 0.00 35.86 2.90
2694 8286 0.320374 ACAGGTGACCCACATACACG 59.680 55.000 0.00 0.00 35.86 4.49
2695 8287 0.391130 CAGGTGACCCACATACACGG 60.391 60.000 0.00 0.00 35.86 4.94
2696 8288 1.743995 GGTGACCCACATACACGGC 60.744 63.158 0.00 0.00 35.86 5.68
2697 8289 1.004320 GTGACCCACATACACGGCA 60.004 57.895 0.00 0.00 34.08 5.69
2698 8290 0.392461 GTGACCCACATACACGGCAT 60.392 55.000 0.00 0.00 34.08 4.40
2699 8291 0.392327 TGACCCACATACACGGCATG 60.392 55.000 0.00 0.00 0.00 4.06
2700 8292 0.107897 GACCCACATACACGGCATGA 60.108 55.000 0.00 0.00 0.00 3.07
2701 8293 0.392461 ACCCACATACACGGCATGAC 60.392 55.000 0.00 0.00 0.00 3.06
2702 8294 0.392327 CCCACATACACGGCATGACA 60.392 55.000 0.00 0.00 0.00 3.58
2703 8295 1.447945 CCACATACACGGCATGACAA 58.552 50.000 0.00 0.00 0.00 3.18
2704 8296 2.016318 CCACATACACGGCATGACAAT 58.984 47.619 0.00 0.00 0.00 2.71
2705 8297 2.423185 CCACATACACGGCATGACAATT 59.577 45.455 0.00 0.00 0.00 2.32
2706 8298 3.625313 CCACATACACGGCATGACAATTA 59.375 43.478 0.00 0.00 0.00 1.40
2707 8299 4.495679 CCACATACACGGCATGACAATTAC 60.496 45.833 0.00 0.00 0.00 1.89
2708 8300 4.332543 CACATACACGGCATGACAATTACT 59.667 41.667 0.00 0.00 0.00 2.24
2709 8301 4.570772 ACATACACGGCATGACAATTACTC 59.429 41.667 0.00 0.00 0.00 2.59
2710 8302 3.052455 ACACGGCATGACAATTACTCA 57.948 42.857 0.00 0.00 0.00 3.41
2711 8303 2.742053 ACACGGCATGACAATTACTCAC 59.258 45.455 0.00 0.00 0.00 3.51
2712 8304 2.741517 CACGGCATGACAATTACTCACA 59.258 45.455 0.00 0.00 0.00 3.58
2713 8305 2.742053 ACGGCATGACAATTACTCACAC 59.258 45.455 0.00 0.00 0.00 3.82
2714 8306 3.002791 CGGCATGACAATTACTCACACT 58.997 45.455 0.00 0.00 0.00 3.55
2715 8307 4.180817 CGGCATGACAATTACTCACACTA 58.819 43.478 0.00 0.00 0.00 2.74
2716 8308 4.629634 CGGCATGACAATTACTCACACTAA 59.370 41.667 0.00 0.00 0.00 2.24
2717 8309 5.121611 CGGCATGACAATTACTCACACTAAA 59.878 40.000 0.00 0.00 0.00 1.85
2718 8310 6.183360 CGGCATGACAATTACTCACACTAAAT 60.183 38.462 0.00 0.00 0.00 1.40
2719 8311 7.011016 CGGCATGACAATTACTCACACTAAATA 59.989 37.037 0.00 0.00 0.00 1.40
2720 8312 8.673711 GGCATGACAATTACTCACACTAAATAA 58.326 33.333 0.00 0.00 0.00 1.40
2750 8342 3.319135 TTTTTAGCACCCGCGGTAA 57.681 47.368 26.12 13.25 45.49 2.85
2751 8343 0.873721 TTTTTAGCACCCGCGGTAAC 59.126 50.000 26.12 12.58 45.49 2.50
2752 8344 0.954938 TTTTAGCACCCGCGGTAACC 60.955 55.000 26.12 9.33 45.49 2.85
2753 8345 2.801483 TTTAGCACCCGCGGTAACCC 62.801 60.000 26.12 7.41 45.49 4.11
2756 8348 2.281622 CACCCGCGGTAACCCAAA 60.282 61.111 26.12 0.00 32.11 3.28
2757 8349 2.032987 ACCCGCGGTAACCCAAAG 59.967 61.111 26.12 7.62 32.11 2.77
2758 8350 3.436924 CCCGCGGTAACCCAAAGC 61.437 66.667 26.12 0.00 0.00 3.51
2759 8351 2.359478 CCGCGGTAACCCAAAGCT 60.359 61.111 19.50 0.00 0.00 3.74
2760 8352 1.969589 CCGCGGTAACCCAAAGCTT 60.970 57.895 19.50 0.00 0.00 3.74
2761 8353 1.209127 CGCGGTAACCCAAAGCTTG 59.791 57.895 0.00 0.00 0.00 4.01
2769 8361 4.009015 CCAAAGCTTGGCCTCCTC 57.991 61.111 3.32 0.00 45.17 3.71
2770 8362 1.381851 CCAAAGCTTGGCCTCCTCT 59.618 57.895 3.32 0.00 45.17 3.69
2771 8363 0.620556 CCAAAGCTTGGCCTCCTCTA 59.379 55.000 3.32 0.00 45.17 2.43
2772 8364 1.407989 CCAAAGCTTGGCCTCCTCTAG 60.408 57.143 3.32 0.00 45.17 2.43
2787 8379 6.588719 CTCCTCTAGGATGATGTTAAGGAG 57.411 45.833 0.00 0.00 44.46 3.69
2788 8380 6.281190 TCCTCTAGGATGATGTTAAGGAGA 57.719 41.667 0.00 0.00 39.78 3.71
2789 8381 6.683537 TCCTCTAGGATGATGTTAAGGAGAA 58.316 40.000 0.00 0.00 39.78 2.87
2790 8382 7.309091 TCCTCTAGGATGATGTTAAGGAGAAT 58.691 38.462 0.00 0.00 39.78 2.40
2791 8383 7.234371 TCCTCTAGGATGATGTTAAGGAGAATG 59.766 40.741 0.00 0.00 39.78 2.67
2792 8384 7.308450 TCTAGGATGATGTTAAGGAGAATGG 57.692 40.000 0.00 0.00 0.00 3.16
2793 8385 5.316158 AGGATGATGTTAAGGAGAATGGG 57.684 43.478 0.00 0.00 0.00 4.00
2794 8386 3.823304 GGATGATGTTAAGGAGAATGGGC 59.177 47.826 0.00 0.00 0.00 5.36
2795 8387 2.917933 TGATGTTAAGGAGAATGGGCG 58.082 47.619 0.00 0.00 0.00 6.13
2796 8388 2.222027 GATGTTAAGGAGAATGGGCGG 58.778 52.381 0.00 0.00 0.00 6.13
2797 8389 0.393808 TGTTAAGGAGAATGGGCGGC 60.394 55.000 0.00 0.00 0.00 6.53
2798 8390 1.153249 TTAAGGAGAATGGGCGGCG 60.153 57.895 0.51 0.51 0.00 6.46
2799 8391 2.602746 TTAAGGAGAATGGGCGGCGG 62.603 60.000 9.78 0.00 0.00 6.13
2841 8433 2.570468 CGAGCATTTCGTTCGTTTCA 57.430 45.000 0.00 0.00 42.74 2.69
2842 8434 2.898746 CGAGCATTTCGTTCGTTTCAA 58.101 42.857 0.00 0.00 42.74 2.69
2843 8435 3.284914 CGAGCATTTCGTTCGTTTCAAA 58.715 40.909 0.00 0.00 42.74 2.69
2844 8436 3.906008 CGAGCATTTCGTTCGTTTCAAAT 59.094 39.130 0.00 0.00 42.74 2.32
2845 8437 5.076765 CGAGCATTTCGTTCGTTTCAAATA 58.923 37.500 0.00 0.00 42.74 1.40
2846 8438 5.223094 CGAGCATTTCGTTCGTTTCAAATAG 59.777 40.000 0.00 0.00 42.74 1.73
2847 8439 5.997385 AGCATTTCGTTCGTTTCAAATAGT 58.003 33.333 0.00 0.00 0.00 2.12
2848 8440 6.077838 AGCATTTCGTTCGTTTCAAATAGTC 58.922 36.000 0.00 0.00 0.00 2.59
2849 8441 5.283012 GCATTTCGTTCGTTTCAAATAGTCC 59.717 40.000 0.00 0.00 0.00 3.85
2850 8442 5.987777 TTTCGTTCGTTTCAAATAGTCCA 57.012 34.783 0.00 0.00 0.00 4.02
2851 8443 5.987777 TTCGTTCGTTTCAAATAGTCCAA 57.012 34.783 0.00 0.00 0.00 3.53
2852 8444 5.585500 TCGTTCGTTTCAAATAGTCCAAG 57.415 39.130 0.00 0.00 0.00 3.61
2853 8445 5.291178 TCGTTCGTTTCAAATAGTCCAAGA 58.709 37.500 0.00 0.00 0.00 3.02
2854 8446 5.176223 TCGTTCGTTTCAAATAGTCCAAGAC 59.824 40.000 0.00 0.00 0.00 3.01
2855 8447 5.050634 CGTTCGTTTCAAATAGTCCAAGACA 60.051 40.000 0.00 0.00 34.60 3.41
2856 8448 6.347402 CGTTCGTTTCAAATAGTCCAAGACAT 60.347 38.462 0.00 0.00 34.60 3.06
2857 8449 7.148705 CGTTCGTTTCAAATAGTCCAAGACATA 60.149 37.037 0.00 0.00 34.60 2.29
2858 8450 8.500773 GTTCGTTTCAAATAGTCCAAGACATAA 58.499 33.333 0.00 0.00 34.60 1.90
2859 8451 8.251750 TCGTTTCAAATAGTCCAAGACATAAG 57.748 34.615 0.00 0.00 34.60 1.73
2860 8452 6.961554 CGTTTCAAATAGTCCAAGACATAAGC 59.038 38.462 0.00 0.00 34.60 3.09
2861 8453 7.360861 CGTTTCAAATAGTCCAAGACATAAGCA 60.361 37.037 0.00 0.00 34.60 3.91
2862 8454 8.462016 GTTTCAAATAGTCCAAGACATAAGCAT 58.538 33.333 0.00 0.00 34.60 3.79
2863 8455 9.679661 TTTCAAATAGTCCAAGACATAAGCATA 57.320 29.630 0.00 0.00 34.60 3.14
2864 8456 8.893219 TCAAATAGTCCAAGACATAAGCATAG 57.107 34.615 0.00 0.00 34.60 2.23
2865 8457 8.486210 TCAAATAGTCCAAGACATAAGCATAGT 58.514 33.333 0.00 0.00 34.60 2.12
2866 8458 8.554528 CAAATAGTCCAAGACATAAGCATAGTG 58.445 37.037 0.00 0.00 34.60 2.74
2867 8459 5.939764 AGTCCAAGACATAAGCATAGTGA 57.060 39.130 0.00 0.00 34.60 3.41
2868 8460 5.911752 AGTCCAAGACATAAGCATAGTGAG 58.088 41.667 0.00 0.00 34.60 3.51
2869 8461 5.053145 GTCCAAGACATAAGCATAGTGAGG 58.947 45.833 0.00 0.00 32.09 3.86
2870 8462 4.101585 TCCAAGACATAAGCATAGTGAGGG 59.898 45.833 0.00 0.00 0.00 4.30
2871 8463 4.101585 CCAAGACATAAGCATAGTGAGGGA 59.898 45.833 0.00 0.00 0.00 4.20
2872 8464 5.295950 CAAGACATAAGCATAGTGAGGGAG 58.704 45.833 0.00 0.00 0.00 4.30
2873 8465 3.900601 AGACATAAGCATAGTGAGGGAGG 59.099 47.826 0.00 0.00 0.00 4.30
2874 8466 2.370189 ACATAAGCATAGTGAGGGAGGC 59.630 50.000 0.00 0.00 0.00 4.70
2875 8467 1.424638 TAAGCATAGTGAGGGAGGCC 58.575 55.000 0.00 0.00 0.00 5.19
2876 8468 0.621571 AAGCATAGTGAGGGAGGCCA 60.622 55.000 5.01 0.00 0.00 5.36
2877 8469 0.401105 AGCATAGTGAGGGAGGCCAT 60.401 55.000 5.01 0.00 0.00 4.40
2878 8470 0.250640 GCATAGTGAGGGAGGCCATG 60.251 60.000 5.01 0.00 0.00 3.66
2879 8471 0.399454 CATAGTGAGGGAGGCCATGG 59.601 60.000 7.63 7.63 0.00 3.66
2880 8472 1.422161 ATAGTGAGGGAGGCCATGGC 61.422 60.000 29.47 29.47 41.06 4.40
2881 8473 2.551856 TAGTGAGGGAGGCCATGGCT 62.552 60.000 34.70 21.29 42.48 4.75
2882 8474 2.614969 TGAGGGAGGCCATGGCTT 60.615 61.111 34.70 29.53 38.98 4.35
2883 8475 2.123982 GAGGGAGGCCATGGCTTG 60.124 66.667 34.70 0.00 38.98 4.01
2884 8476 2.943265 AGGGAGGCCATGGCTTGT 60.943 61.111 34.70 20.39 38.98 3.16
2885 8477 2.440980 GGGAGGCCATGGCTTGTC 60.441 66.667 34.70 26.25 38.98 3.18
2886 8478 2.679716 GGAGGCCATGGCTTGTCT 59.320 61.111 34.70 23.51 38.98 3.41
2887 8479 1.635817 GGGAGGCCATGGCTTGTCTA 61.636 60.000 34.70 0.00 38.98 2.59
2888 8480 0.475906 GGAGGCCATGGCTTGTCTAT 59.524 55.000 34.70 12.98 38.98 1.98
2889 8481 1.133668 GGAGGCCATGGCTTGTCTATT 60.134 52.381 34.70 11.25 38.98 1.73
2890 8482 1.952296 GAGGCCATGGCTTGTCTATTG 59.048 52.381 34.70 0.00 38.98 1.90
2891 8483 1.035139 GGCCATGGCTTGTCTATTGG 58.965 55.000 34.70 0.00 41.60 3.16
2892 8484 1.035139 GCCATGGCTTGTCTATTGGG 58.965 55.000 29.98 0.00 38.26 4.12
2893 8485 1.696063 CCATGGCTTGTCTATTGGGG 58.304 55.000 0.00 0.00 0.00 4.96
2894 8486 1.063717 CCATGGCTTGTCTATTGGGGT 60.064 52.381 0.00 0.00 0.00 4.95
2895 8487 2.624029 CCATGGCTTGTCTATTGGGGTT 60.624 50.000 0.00 0.00 0.00 4.11
2896 8488 2.990740 TGGCTTGTCTATTGGGGTTT 57.009 45.000 0.00 0.00 0.00 3.27
2897 8489 2.802719 TGGCTTGTCTATTGGGGTTTC 58.197 47.619 0.00 0.00 0.00 2.78
2898 8490 1.743394 GGCTTGTCTATTGGGGTTTCG 59.257 52.381 0.00 0.00 0.00 3.46
2899 8491 2.617021 GGCTTGTCTATTGGGGTTTCGA 60.617 50.000 0.00 0.00 0.00 3.71
2900 8492 3.279434 GCTTGTCTATTGGGGTTTCGAT 58.721 45.455 0.00 0.00 0.00 3.59
2901 8493 3.694566 GCTTGTCTATTGGGGTTTCGATT 59.305 43.478 0.00 0.00 0.00 3.34
2902 8494 4.438744 GCTTGTCTATTGGGGTTTCGATTG 60.439 45.833 0.00 0.00 0.00 2.67
2903 8495 4.295141 TGTCTATTGGGGTTTCGATTGT 57.705 40.909 0.00 0.00 0.00 2.71
2904 8496 4.258543 TGTCTATTGGGGTTTCGATTGTC 58.741 43.478 0.00 0.00 0.00 3.18
2905 8497 4.258543 GTCTATTGGGGTTTCGATTGTCA 58.741 43.478 0.00 0.00 0.00 3.58
2906 8498 4.698304 GTCTATTGGGGTTTCGATTGTCAA 59.302 41.667 0.00 0.00 0.00 3.18
2907 8499 5.357032 GTCTATTGGGGTTTCGATTGTCAAT 59.643 40.000 0.00 0.00 0.00 2.57
2908 8500 5.949354 TCTATTGGGGTTTCGATTGTCAATT 59.051 36.000 0.00 0.00 0.00 2.32
2909 8501 4.513198 TTGGGGTTTCGATTGTCAATTC 57.487 40.909 0.00 0.00 0.00 2.17
2910 8502 3.761897 TGGGGTTTCGATTGTCAATTCT 58.238 40.909 0.00 0.00 0.00 2.40
2911 8503 3.756434 TGGGGTTTCGATTGTCAATTCTC 59.244 43.478 0.00 0.00 0.00 2.87
2912 8504 4.010349 GGGGTTTCGATTGTCAATTCTCT 58.990 43.478 0.00 0.00 0.00 3.10
2913 8505 4.459337 GGGGTTTCGATTGTCAATTCTCTT 59.541 41.667 0.00 0.00 0.00 2.85
2914 8506 5.646360 GGGGTTTCGATTGTCAATTCTCTTA 59.354 40.000 0.00 0.00 0.00 2.10
2915 8507 6.318900 GGGGTTTCGATTGTCAATTCTCTTAT 59.681 38.462 0.00 0.00 0.00 1.73
2916 8508 7.410485 GGGTTTCGATTGTCAATTCTCTTATC 58.590 38.462 0.00 0.00 0.00 1.75
2917 8509 7.410485 GGTTTCGATTGTCAATTCTCTTATCC 58.590 38.462 0.00 0.00 0.00 2.59
2918 8510 7.410485 GTTTCGATTGTCAATTCTCTTATCCC 58.590 38.462 0.00 0.00 0.00 3.85
2919 8511 6.233905 TCGATTGTCAATTCTCTTATCCCA 57.766 37.500 0.00 0.00 0.00 4.37
2920 8512 6.049149 TCGATTGTCAATTCTCTTATCCCAC 58.951 40.000 0.00 0.00 0.00 4.61
2921 8513 5.237344 CGATTGTCAATTCTCTTATCCCACC 59.763 44.000 0.00 0.00 0.00 4.61
2922 8514 5.512942 TTGTCAATTCTCTTATCCCACCA 57.487 39.130 0.00 0.00 0.00 4.17
2923 8515 5.715439 TGTCAATTCTCTTATCCCACCAT 57.285 39.130 0.00 0.00 0.00 3.55
2924 8516 6.078456 TGTCAATTCTCTTATCCCACCATT 57.922 37.500 0.00 0.00 0.00 3.16
2925 8517 6.122277 TGTCAATTCTCTTATCCCACCATTC 58.878 40.000 0.00 0.00 0.00 2.67
2926 8518 6.122277 GTCAATTCTCTTATCCCACCATTCA 58.878 40.000 0.00 0.00 0.00 2.57
2927 8519 6.774656 GTCAATTCTCTTATCCCACCATTCAT 59.225 38.462 0.00 0.00 0.00 2.57
2928 8520 7.286316 GTCAATTCTCTTATCCCACCATTCATT 59.714 37.037 0.00 0.00 0.00 2.57
2929 8521 7.286087 TCAATTCTCTTATCCCACCATTCATTG 59.714 37.037 0.00 0.00 0.00 2.82
2930 8522 5.974156 TCTCTTATCCCACCATTCATTGA 57.026 39.130 0.00 0.00 0.00 2.57
2931 8523 5.684704 TCTCTTATCCCACCATTCATTGAC 58.315 41.667 0.00 0.00 0.00 3.18
2932 8524 4.450976 TCTTATCCCACCATTCATTGACG 58.549 43.478 0.00 0.00 0.00 4.35
2933 8525 2.057137 ATCCCACCATTCATTGACGG 57.943 50.000 0.64 0.64 0.00 4.79
2934 8526 0.988063 TCCCACCATTCATTGACGGA 59.012 50.000 8.05 0.00 0.00 4.69
2935 8527 1.065491 TCCCACCATTCATTGACGGAG 60.065 52.381 8.05 1.17 0.00 4.63
2955 8547 3.364442 CGCAAGGTGCCAATTGGA 58.636 55.556 29.02 10.48 41.12 3.53
2956 8548 1.213537 CGCAAGGTGCCAATTGGAG 59.786 57.895 29.02 10.34 41.12 3.86
2957 8549 1.593265 GCAAGGTGCCAATTGGAGG 59.407 57.895 29.02 10.36 37.42 4.30
2958 8550 1.187567 GCAAGGTGCCAATTGGAGGT 61.188 55.000 29.02 5.96 37.42 3.85
2959 8551 0.604578 CAAGGTGCCAATTGGAGGTG 59.395 55.000 29.02 13.19 37.39 4.00
2960 8552 0.188342 AAGGTGCCAATTGGAGGTGT 59.812 50.000 29.02 6.63 37.39 4.16
2961 8553 0.251341 AGGTGCCAATTGGAGGTGTC 60.251 55.000 29.02 9.57 37.39 3.67
2962 8554 1.250840 GGTGCCAATTGGAGGTGTCC 61.251 60.000 29.02 14.71 44.24 4.02
2970 8562 4.625800 GGAGGTGTCCATGTGAGC 57.374 61.111 0.00 0.00 43.31 4.26
2971 8563 1.679311 GGAGGTGTCCATGTGAGCA 59.321 57.895 0.00 0.00 43.31 4.26
2972 8564 0.036732 GGAGGTGTCCATGTGAGCAA 59.963 55.000 0.00 0.00 43.31 3.91
2973 8565 1.446907 GAGGTGTCCATGTGAGCAAG 58.553 55.000 0.00 0.00 0.00 4.01
2974 8566 1.002430 GAGGTGTCCATGTGAGCAAGA 59.998 52.381 0.00 0.00 0.00 3.02
2975 8567 1.160137 GGTGTCCATGTGAGCAAGAC 58.840 55.000 0.00 0.00 34.48 3.01
2976 8568 1.160137 GTGTCCATGTGAGCAAGACC 58.840 55.000 0.00 0.00 33.55 3.85
2977 8569 0.764271 TGTCCATGTGAGCAAGACCA 59.236 50.000 0.00 0.00 33.55 4.02
2978 8570 1.142667 TGTCCATGTGAGCAAGACCAA 59.857 47.619 0.00 0.00 33.55 3.67
2979 8571 1.808945 GTCCATGTGAGCAAGACCAAG 59.191 52.381 0.00 0.00 0.00 3.61
2980 8572 0.524862 CCATGTGAGCAAGACCAAGC 59.475 55.000 0.00 0.00 0.00 4.01
2981 8573 1.531423 CATGTGAGCAAGACCAAGCT 58.469 50.000 0.00 0.00 45.25 3.74
2982 8574 1.884579 CATGTGAGCAAGACCAAGCTT 59.115 47.619 0.00 0.00 42.04 3.74
2983 8575 1.597742 TGTGAGCAAGACCAAGCTTC 58.402 50.000 0.00 0.00 42.04 3.86
2984 8576 1.141657 TGTGAGCAAGACCAAGCTTCT 59.858 47.619 0.00 0.00 42.04 2.85
2985 8577 1.534595 GTGAGCAAGACCAAGCTTCTG 59.465 52.381 0.00 0.00 42.04 3.02
2986 8578 1.417517 TGAGCAAGACCAAGCTTCTGA 59.582 47.619 0.00 0.00 42.04 3.27
2987 8579 2.158769 TGAGCAAGACCAAGCTTCTGAA 60.159 45.455 0.00 0.00 42.04 3.02
2988 8580 3.080319 GAGCAAGACCAAGCTTCTGAAT 58.920 45.455 0.00 0.00 42.04 2.57
2989 8581 2.818432 AGCAAGACCAAGCTTCTGAATG 59.182 45.455 0.00 0.00 38.01 2.67
2990 8582 2.816087 GCAAGACCAAGCTTCTGAATGA 59.184 45.455 0.00 0.00 0.00 2.57
2991 8583 3.442977 GCAAGACCAAGCTTCTGAATGAT 59.557 43.478 0.00 0.00 0.00 2.45
2992 8584 4.082354 GCAAGACCAAGCTTCTGAATGATT 60.082 41.667 0.00 0.00 0.00 2.57
2993 8585 5.399858 CAAGACCAAGCTTCTGAATGATTG 58.600 41.667 0.00 9.40 0.00 2.67
2994 8586 4.914983 AGACCAAGCTTCTGAATGATTGA 58.085 39.130 14.82 0.00 32.07 2.57
2995 8587 5.507637 AGACCAAGCTTCTGAATGATTGAT 58.492 37.500 14.82 3.12 32.07 2.57
2996 8588 5.589452 AGACCAAGCTTCTGAATGATTGATC 59.411 40.000 14.82 10.02 32.07 2.92
2997 8589 5.507637 ACCAAGCTTCTGAATGATTGATCT 58.492 37.500 14.82 1.24 32.07 2.75
2998 8590 5.589452 ACCAAGCTTCTGAATGATTGATCTC 59.411 40.000 14.82 0.00 32.07 2.75
2999 8591 5.008811 CCAAGCTTCTGAATGATTGATCTCC 59.991 44.000 14.82 0.00 32.07 3.71
3000 8592 5.369409 AGCTTCTGAATGATTGATCTCCA 57.631 39.130 0.00 0.00 0.00 3.86
3001 8593 5.369833 AGCTTCTGAATGATTGATCTCCAG 58.630 41.667 0.00 0.00 0.00 3.86
3002 8594 5.130643 AGCTTCTGAATGATTGATCTCCAGA 59.869 40.000 0.00 0.00 0.00 3.86
3003 8595 5.467399 GCTTCTGAATGATTGATCTCCAGAG 59.533 44.000 0.00 0.00 33.00 3.35
3004 8596 4.958509 TCTGAATGATTGATCTCCAGAGC 58.041 43.478 0.00 0.00 0.00 4.09
3005 8597 4.066490 CTGAATGATTGATCTCCAGAGCC 58.934 47.826 0.00 0.00 0.00 4.70
3006 8598 3.715315 TGAATGATTGATCTCCAGAGCCT 59.285 43.478 0.00 0.00 0.00 4.58
3007 8599 4.903649 TGAATGATTGATCTCCAGAGCCTA 59.096 41.667 0.00 0.00 0.00 3.93
3008 8600 5.367644 TGAATGATTGATCTCCAGAGCCTAA 59.632 40.000 0.00 0.00 0.00 2.69
3009 8601 4.952071 TGATTGATCTCCAGAGCCTAAG 57.048 45.455 0.00 0.00 0.00 2.18
3010 8602 3.070734 TGATTGATCTCCAGAGCCTAAGC 59.929 47.826 0.00 0.00 40.32 3.09
3011 8603 1.035923 TGATCTCCAGAGCCTAAGCG 58.964 55.000 0.00 0.00 46.67 4.68
3012 8604 1.036707 GATCTCCAGAGCCTAAGCGT 58.963 55.000 0.00 0.00 46.67 5.07
3013 8605 0.749649 ATCTCCAGAGCCTAAGCGTG 59.250 55.000 0.00 0.00 46.67 5.34
3014 8606 0.612174 TCTCCAGAGCCTAAGCGTGT 60.612 55.000 0.00 0.00 46.67 4.49
3015 8607 1.103803 CTCCAGAGCCTAAGCGTGTA 58.896 55.000 0.00 0.00 46.67 2.90
3016 8608 0.815734 TCCAGAGCCTAAGCGTGTAC 59.184 55.000 0.00 0.00 46.67 2.90
3017 8609 0.179108 CCAGAGCCTAAGCGTGTACC 60.179 60.000 0.00 0.00 46.67 3.34
3018 8610 0.525668 CAGAGCCTAAGCGTGTACCG 60.526 60.000 0.00 0.00 46.67 4.02
3019 8611 0.679002 AGAGCCTAAGCGTGTACCGA 60.679 55.000 7.77 0.00 46.67 4.69
3020 8612 0.525029 GAGCCTAAGCGTGTACCGAC 60.525 60.000 7.77 0.59 46.67 4.79
3021 8613 1.213537 GCCTAAGCGTGTACCGACA 59.786 57.895 7.77 0.00 39.56 4.35
3033 8625 4.238761 TGTACCGACACTTGAAGAAGAG 57.761 45.455 0.00 0.00 32.98 2.85
3034 8626 3.887110 TGTACCGACACTTGAAGAAGAGA 59.113 43.478 0.00 0.00 32.98 3.10
3035 8627 4.523173 TGTACCGACACTTGAAGAAGAGAT 59.477 41.667 0.00 0.00 32.98 2.75
3036 8628 3.919216 ACCGACACTTGAAGAAGAGATG 58.081 45.455 0.00 0.00 32.98 2.90
3037 8629 3.322254 ACCGACACTTGAAGAAGAGATGT 59.678 43.478 0.00 0.00 32.98 3.06
3038 8630 3.677121 CCGACACTTGAAGAAGAGATGTG 59.323 47.826 0.00 0.00 32.98 3.21
3039 8631 3.122613 CGACACTTGAAGAAGAGATGTGC 59.877 47.826 0.00 0.00 32.98 4.57
3040 8632 4.060900 GACACTTGAAGAAGAGATGTGCA 58.939 43.478 0.00 0.00 32.98 4.57
3041 8633 3.812053 ACACTTGAAGAAGAGATGTGCAC 59.188 43.478 10.75 10.75 32.98 4.57
3042 8634 3.188048 CACTTGAAGAAGAGATGTGCACC 59.812 47.826 15.69 0.00 32.98 5.01
3043 8635 2.479566 TGAAGAAGAGATGTGCACCC 57.520 50.000 15.69 6.29 0.00 4.61
3044 8636 1.338105 TGAAGAAGAGATGTGCACCCG 60.338 52.381 15.69 0.00 0.00 5.28
3045 8637 0.687354 AAGAAGAGATGTGCACCCGT 59.313 50.000 15.69 0.00 0.00 5.28
3046 8638 0.687354 AGAAGAGATGTGCACCCGTT 59.313 50.000 15.69 5.64 0.00 4.44
3047 8639 1.072331 AGAAGAGATGTGCACCCGTTT 59.928 47.619 15.69 6.28 0.00 3.60
3048 8640 1.464997 GAAGAGATGTGCACCCGTTTC 59.535 52.381 15.69 11.09 0.00 2.78
3049 8641 0.687354 AGAGATGTGCACCCGTTTCT 59.313 50.000 15.69 8.58 0.00 2.52
3050 8642 1.072331 AGAGATGTGCACCCGTTTCTT 59.928 47.619 15.69 0.00 0.00 2.52
3051 8643 1.197721 GAGATGTGCACCCGTTTCTTG 59.802 52.381 15.69 0.00 0.00 3.02
3052 8644 0.951558 GATGTGCACCCGTTTCTTGT 59.048 50.000 15.69 0.00 0.00 3.16
3053 8645 1.336755 GATGTGCACCCGTTTCTTGTT 59.663 47.619 15.69 0.00 0.00 2.83
3054 8646 0.736053 TGTGCACCCGTTTCTTGTTC 59.264 50.000 15.69 0.00 0.00 3.18
3055 8647 1.021968 GTGCACCCGTTTCTTGTTCT 58.978 50.000 5.22 0.00 0.00 3.01
3056 8648 1.002792 GTGCACCCGTTTCTTGTTCTC 60.003 52.381 5.22 0.00 0.00 2.87
3057 8649 1.134220 TGCACCCGTTTCTTGTTCTCT 60.134 47.619 0.00 0.00 0.00 3.10
3058 8650 1.947456 GCACCCGTTTCTTGTTCTCTT 59.053 47.619 0.00 0.00 0.00 2.85
3059 8651 2.357952 GCACCCGTTTCTTGTTCTCTTT 59.642 45.455 0.00 0.00 0.00 2.52
3060 8652 3.181490 GCACCCGTTTCTTGTTCTCTTTT 60.181 43.478 0.00 0.00 0.00 2.27
3061 8653 4.035909 GCACCCGTTTCTTGTTCTCTTTTA 59.964 41.667 0.00 0.00 0.00 1.52
3062 8654 5.507974 CACCCGTTTCTTGTTCTCTTTTAC 58.492 41.667 0.00 0.00 0.00 2.01
3063 8655 5.065474 CACCCGTTTCTTGTTCTCTTTTACA 59.935 40.000 0.00 0.00 0.00 2.41
3064 8656 5.826208 ACCCGTTTCTTGTTCTCTTTTACAT 59.174 36.000 0.00 0.00 0.00 2.29
3065 8657 6.993902 ACCCGTTTCTTGTTCTCTTTTACATA 59.006 34.615 0.00 0.00 0.00 2.29
3066 8658 7.172703 ACCCGTTTCTTGTTCTCTTTTACATAG 59.827 37.037 0.00 0.00 0.00 2.23
3067 8659 7.015877 CCGTTTCTTGTTCTCTTTTACATAGC 58.984 38.462 0.00 0.00 0.00 2.97
3068 8660 7.095187 CCGTTTCTTGTTCTCTTTTACATAGCT 60.095 37.037 0.00 0.00 0.00 3.32
3069 8661 7.742089 CGTTTCTTGTTCTCTTTTACATAGCTG 59.258 37.037 0.00 0.00 0.00 4.24
3070 8662 7.672983 TTCTTGTTCTCTTTTACATAGCTGG 57.327 36.000 0.00 0.00 0.00 4.85
3071 8663 5.643777 TCTTGTTCTCTTTTACATAGCTGGC 59.356 40.000 0.00 0.00 0.00 4.85
3072 8664 4.905429 TGTTCTCTTTTACATAGCTGGCA 58.095 39.130 0.00 0.00 0.00 4.92
3073 8665 5.312895 TGTTCTCTTTTACATAGCTGGCAA 58.687 37.500 0.00 0.00 0.00 4.52
3074 8666 5.767665 TGTTCTCTTTTACATAGCTGGCAAA 59.232 36.000 0.00 0.00 0.00 3.68
3075 8667 6.072508 TGTTCTCTTTTACATAGCTGGCAAAG 60.073 38.462 0.00 1.76 31.50 2.77
3076 8668 4.943705 TCTCTTTTACATAGCTGGCAAAGG 59.056 41.667 0.00 0.00 31.33 3.11
3077 8669 3.443681 TCTTTTACATAGCTGGCAAAGGC 59.556 43.478 0.00 0.00 40.13 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 4.364409 GACAACCCGCGTGCGAAC 62.364 66.667 16.91 0.00 42.83 3.95
48 49 4.893601 TGACAACCCGCGTGCGAA 62.894 61.111 16.91 0.00 42.83 4.70
51 52 4.012895 CTGTGACAACCCGCGTGC 62.013 66.667 4.92 0.00 0.00 5.34
52 53 4.012895 GCTGTGACAACCCGCGTG 62.013 66.667 4.92 0.00 0.00 5.34
55 56 4.643387 AGGGCTGTGACAACCCGC 62.643 66.667 17.70 2.08 43.94 6.13
56 57 2.358737 GAGGGCTGTGACAACCCG 60.359 66.667 17.70 0.00 43.94 5.28
57 58 1.302832 CTGAGGGCTGTGACAACCC 60.303 63.158 16.18 16.18 39.88 4.11
81 98 9.671521 GACGTGCATATCATTCGTAATTTATAC 57.328 33.333 0.00 0.00 34.93 1.47
197 214 1.437986 GCTCCAGGAAGCGTCGTAT 59.562 57.895 0.00 0.00 31.56 3.06
223 243 1.271762 TGGCAGGTGAGACGTACTACT 60.272 52.381 0.00 0.00 0.00 2.57
224 244 1.171308 TGGCAGGTGAGACGTACTAC 58.829 55.000 0.00 0.00 0.00 2.73
225 245 1.913778 TTGGCAGGTGAGACGTACTA 58.086 50.000 0.00 0.00 0.00 1.82
242 264 6.864685 TGAAAGAAATGCAGTATGAGCTTTTG 59.135 34.615 0.00 0.00 39.69 2.44
280 307 3.491652 GGCGTCAGCTTTCCTCGC 61.492 66.667 8.53 8.53 44.37 5.03
316 857 2.489971 ACGCGAGAAATTTCCACTTCA 58.510 42.857 15.93 0.00 0.00 3.02
336 877 8.545420 GCGAGAAACGAATAAATATACTTCCAA 58.455 33.333 0.00 0.00 45.77 3.53
362 903 1.949465 ATCCGTTAGGGCTTTTAGCG 58.051 50.000 0.00 0.00 43.62 4.26
464 1386 4.421365 GCCAGTTGCAGATGGGAA 57.579 55.556 18.03 0.00 40.77 3.97
593 2657 0.719465 GTTACATGCGGTTGACTCGG 59.281 55.000 0.00 0.00 0.00 4.63
751 5238 0.468214 TTGGCACCAATTCGTTCCCA 60.468 50.000 0.00 0.00 0.00 4.37
752 5239 0.038618 GTTGGCACCAATTCGTTCCC 60.039 55.000 5.22 0.00 38.28 3.97
829 5344 4.160439 AGGATACATACATAGGTCGGCATG 59.840 45.833 0.00 0.00 41.41 4.06
830 5345 4.353777 AGGATACATACATAGGTCGGCAT 58.646 43.478 0.00 0.00 41.41 4.40
847 5362 0.105658 AGGTGGCCGAGCTTAGGATA 60.106 55.000 12.70 0.00 0.00 2.59
850 5365 1.629043 TATAGGTGGCCGAGCTTAGG 58.371 55.000 11.31 4.94 33.31 2.69
853 5368 3.240302 ACTTATATAGGTGGCCGAGCTT 58.760 45.455 11.31 0.00 33.31 3.74
904 5448 1.416813 GAAGTGCTCGATCGGTGCTG 61.417 60.000 25.52 10.55 0.00 4.41
936 5495 8.380742 TGACTAAGATTGGAAATAGGAAGAGT 57.619 34.615 0.00 0.00 0.00 3.24
983 5567 4.399303 CCGCCATTTCTATTTCTTGGAAGT 59.601 41.667 0.00 0.00 0.00 3.01
1265 5860 8.656849 CAAATCTGGCTAATCGGTTGTATATAC 58.343 37.037 5.89 5.89 0.00 1.47
1267 5862 7.450074 TCAAATCTGGCTAATCGGTTGTATAT 58.550 34.615 0.00 0.00 0.00 0.86
1306 5922 4.711399 TCACAGCCCTAATCATCATCAAG 58.289 43.478 0.00 0.00 0.00 3.02
1341 5957 1.993391 GAATGGGGTCGGGTCCAGA 60.993 63.158 0.00 0.00 36.38 3.86
1371 5988 2.347490 GGCGGGCTGAGTTTCTCA 59.653 61.111 0.00 0.00 38.25 3.27
1530 6158 1.679032 GCCGGCATCTGGAAGTTTACT 60.679 52.381 24.80 0.00 33.76 2.24
1833 6464 0.884704 GTGTCACCACGTCCTGCATT 60.885 55.000 0.00 0.00 0.00 3.56
1851 6482 1.151450 CCTGTCCAGCTTGTTGGGT 59.849 57.895 3.76 0.00 38.81 4.51
2064 6695 2.309764 GATTGATCGCGCGGCAGTTT 62.310 55.000 31.69 15.83 0.00 2.66
2076 6707 7.439356 TGCTGCACTTATTAGTAGTGATTGATC 59.561 37.037 0.00 0.00 44.52 2.92
2171 6829 1.675483 ACAACATGAACTCGCTTGCAA 59.325 42.857 0.00 0.00 0.00 4.08
2369 7760 6.408869 TGTAATTAAGGAGTAGGTTTTCGGG 58.591 40.000 0.00 0.00 0.00 5.14
2386 7777 3.199727 TGCACCAGCTGAGGATGTAATTA 59.800 43.478 17.39 0.00 42.74 1.40
2393 7784 2.025981 TGTTTATGCACCAGCTGAGGAT 60.026 45.455 17.39 15.99 42.74 3.24
2394 7785 1.350684 TGTTTATGCACCAGCTGAGGA 59.649 47.619 17.39 9.18 42.74 3.71
2395 7786 1.825090 TGTTTATGCACCAGCTGAGG 58.175 50.000 17.39 7.82 42.74 3.86
2430 7822 1.071071 TCCTTTTCCGGTCATCGTTGT 59.929 47.619 0.00 0.00 37.11 3.32
2478 7870 5.308014 TCGTTCCTAGTGTAGTAGTGTTGA 58.692 41.667 0.00 0.00 0.00 3.18
2488 7880 3.896888 TCCCTTTGTTCGTTCCTAGTGTA 59.103 43.478 0.00 0.00 0.00 2.90
2612 8204 4.066490 TCTTATGCCTCCGTTTCGAAAAA 58.934 39.130 13.10 0.44 0.00 1.94
2613 8205 3.666274 TCTTATGCCTCCGTTTCGAAAA 58.334 40.909 13.10 0.00 0.00 2.29
2614 8206 3.322211 TCTTATGCCTCCGTTTCGAAA 57.678 42.857 6.47 6.47 0.00 3.46
2615 8207 3.536956 ATCTTATGCCTCCGTTTCGAA 57.463 42.857 0.00 0.00 0.00 3.71
2616 8208 3.536956 AATCTTATGCCTCCGTTTCGA 57.463 42.857 0.00 0.00 0.00 3.71
2617 8209 3.788797 GCAAATCTTATGCCTCCGTTTCG 60.789 47.826 0.00 0.00 37.85 3.46
2618 8210 3.695816 GCAAATCTTATGCCTCCGTTTC 58.304 45.455 0.00 0.00 37.85 2.78
2619 8211 3.782889 GCAAATCTTATGCCTCCGTTT 57.217 42.857 0.00 0.00 37.85 3.60
2627 8219 5.010314 TCAATGGATGAGGCAAATCTTATGC 59.990 40.000 0.00 0.00 36.73 3.14
2628 8220 6.644248 TCAATGGATGAGGCAAATCTTATG 57.356 37.500 0.00 0.00 33.04 1.90
2629 8221 7.850935 ATTCAATGGATGAGGCAAATCTTAT 57.149 32.000 0.00 0.00 39.77 1.73
2630 8222 8.765488 TTATTCAATGGATGAGGCAAATCTTA 57.235 30.769 0.00 0.00 39.77 2.10
2631 8223 7.562454 TCTTATTCAATGGATGAGGCAAATCTT 59.438 33.333 0.00 0.00 39.77 2.40
2632 8224 7.064866 TCTTATTCAATGGATGAGGCAAATCT 58.935 34.615 0.00 0.00 39.77 2.40
2633 8225 7.281040 TCTTATTCAATGGATGAGGCAAATC 57.719 36.000 0.00 0.00 39.77 2.17
2634 8226 7.562454 TCTTCTTATTCAATGGATGAGGCAAAT 59.438 33.333 0.00 0.00 39.77 2.32
2635 8227 6.891361 TCTTCTTATTCAATGGATGAGGCAAA 59.109 34.615 0.00 0.00 39.77 3.68
2636 8228 6.425735 TCTTCTTATTCAATGGATGAGGCAA 58.574 36.000 0.00 0.00 39.77 4.52
2637 8229 6.005066 TCTTCTTATTCAATGGATGAGGCA 57.995 37.500 0.00 0.00 39.77 4.75
2638 8230 6.294473 TCTCTTCTTATTCAATGGATGAGGC 58.706 40.000 13.25 0.00 39.77 4.70
2639 8231 7.507829 ACTCTCTTCTTATTCAATGGATGAGG 58.492 38.462 13.25 9.29 39.77 3.86
2640 8232 8.961294 AACTCTCTTCTTATTCAATGGATGAG 57.039 34.615 9.71 9.71 39.77 2.90
2645 8237 9.883142 ACTCTAAACTCTCTTCTTATTCAATGG 57.117 33.333 0.00 0.00 0.00 3.16
2653 8245 8.794553 CCTGTAACACTCTAAACTCTCTTCTTA 58.205 37.037 0.00 0.00 0.00 2.10
2654 8246 7.288158 ACCTGTAACACTCTAAACTCTCTTCTT 59.712 37.037 0.00 0.00 0.00 2.52
2655 8247 6.778559 ACCTGTAACACTCTAAACTCTCTTCT 59.221 38.462 0.00 0.00 0.00 2.85
2656 8248 6.864165 CACCTGTAACACTCTAAACTCTCTTC 59.136 42.308 0.00 0.00 0.00 2.87
2657 8249 6.550108 TCACCTGTAACACTCTAAACTCTCTT 59.450 38.462 0.00 0.00 0.00 2.85
2658 8250 6.016108 GTCACCTGTAACACTCTAAACTCTCT 60.016 42.308 0.00 0.00 0.00 3.10
2659 8251 6.151004 GTCACCTGTAACACTCTAAACTCTC 58.849 44.000 0.00 0.00 0.00 3.20
2660 8252 5.010820 GGTCACCTGTAACACTCTAAACTCT 59.989 44.000 0.00 0.00 0.00 3.24
2661 8253 5.228665 GGTCACCTGTAACACTCTAAACTC 58.771 45.833 0.00 0.00 0.00 3.01
2662 8254 4.040095 GGGTCACCTGTAACACTCTAAACT 59.960 45.833 0.00 0.00 0.00 2.66
2663 8255 4.202284 TGGGTCACCTGTAACACTCTAAAC 60.202 45.833 0.00 0.00 37.76 2.01
2664 8256 3.968649 TGGGTCACCTGTAACACTCTAAA 59.031 43.478 0.00 0.00 37.76 1.85
2665 8257 3.322828 GTGGGTCACCTGTAACACTCTAA 59.677 47.826 0.00 0.00 37.76 2.10
2666 8258 2.895404 GTGGGTCACCTGTAACACTCTA 59.105 50.000 0.00 0.00 37.76 2.43
2667 8259 1.692519 GTGGGTCACCTGTAACACTCT 59.307 52.381 0.00 0.00 37.76 3.24
2668 8260 1.414919 TGTGGGTCACCTGTAACACTC 59.585 52.381 0.00 0.00 37.76 3.51
2669 8261 1.502690 TGTGGGTCACCTGTAACACT 58.497 50.000 0.00 0.00 37.76 3.55
2670 8262 2.561478 ATGTGGGTCACCTGTAACAC 57.439 50.000 0.00 0.00 37.76 3.32
2671 8263 2.973406 TGTATGTGGGTCACCTGTAACA 59.027 45.455 0.00 0.00 37.76 2.41
2672 8264 3.332034 GTGTATGTGGGTCACCTGTAAC 58.668 50.000 0.00 0.00 37.76 2.50
2673 8265 2.028839 CGTGTATGTGGGTCACCTGTAA 60.029 50.000 0.00 0.00 37.76 2.41
2674 8266 1.546923 CGTGTATGTGGGTCACCTGTA 59.453 52.381 0.00 0.00 37.76 2.74
2675 8267 0.320374 CGTGTATGTGGGTCACCTGT 59.680 55.000 0.00 0.00 37.76 4.00
2676 8268 0.391130 CCGTGTATGTGGGTCACCTG 60.391 60.000 0.00 0.00 37.76 4.00
2677 8269 1.980052 CCGTGTATGTGGGTCACCT 59.020 57.895 0.00 0.00 37.76 4.00
2678 8270 1.743995 GCCGTGTATGTGGGTCACC 60.744 63.158 0.00 0.00 32.73 4.02
2679 8271 0.392461 ATGCCGTGTATGTGGGTCAC 60.392 55.000 0.00 0.00 34.56 3.67
2680 8272 0.392327 CATGCCGTGTATGTGGGTCA 60.392 55.000 0.00 0.00 0.00 4.02
2681 8273 0.107897 TCATGCCGTGTATGTGGGTC 60.108 55.000 0.00 0.00 0.00 4.46
2682 8274 0.392461 GTCATGCCGTGTATGTGGGT 60.392 55.000 0.00 0.00 0.00 4.51
2683 8275 0.392327 TGTCATGCCGTGTATGTGGG 60.392 55.000 0.00 0.00 0.00 4.61
2684 8276 1.447945 TTGTCATGCCGTGTATGTGG 58.552 50.000 0.00 0.00 0.00 4.17
2685 8277 3.763097 AATTGTCATGCCGTGTATGTG 57.237 42.857 0.00 0.00 0.00 3.21
2686 8278 4.513442 AGTAATTGTCATGCCGTGTATGT 58.487 39.130 0.00 0.00 0.00 2.29
2687 8279 4.570369 TGAGTAATTGTCATGCCGTGTATG 59.430 41.667 0.00 0.00 0.00 2.39
2688 8280 4.570772 GTGAGTAATTGTCATGCCGTGTAT 59.429 41.667 0.00 0.00 0.00 2.29
2689 8281 3.930229 GTGAGTAATTGTCATGCCGTGTA 59.070 43.478 0.00 0.00 0.00 2.90
2690 8282 2.742053 GTGAGTAATTGTCATGCCGTGT 59.258 45.455 0.00 0.00 0.00 4.49
2691 8283 2.741517 TGTGAGTAATTGTCATGCCGTG 59.258 45.455 0.00 0.00 0.00 4.94
2692 8284 2.742053 GTGTGAGTAATTGTCATGCCGT 59.258 45.455 0.00 0.00 0.00 5.68
2693 8285 3.002791 AGTGTGAGTAATTGTCATGCCG 58.997 45.455 0.00 0.00 0.00 5.69
2694 8286 6.494893 TTTAGTGTGAGTAATTGTCATGCC 57.505 37.500 0.00 0.00 0.00 4.40
2732 8324 0.873721 GTTACCGCGGGTGCTAAAAA 59.126 50.000 31.76 7.19 39.65 1.94
2733 8325 0.954938 GGTTACCGCGGGTGCTAAAA 60.955 55.000 31.76 8.65 39.65 1.52
2734 8326 1.375780 GGTTACCGCGGGTGCTAAA 60.376 57.895 31.76 10.49 39.65 1.85
2735 8327 2.265424 GGTTACCGCGGGTGCTAA 59.735 61.111 31.76 16.05 39.65 3.09
2736 8328 3.773404 GGGTTACCGCGGGTGCTA 61.773 66.667 31.76 9.95 39.65 3.49
2739 8331 2.281622 TTTGGGTTACCGCGGGTG 60.282 61.111 31.76 4.35 40.75 4.61
2740 8332 2.032987 CTTTGGGTTACCGCGGGT 59.967 61.111 31.76 17.55 40.75 5.28
2741 8333 3.436924 GCTTTGGGTTACCGCGGG 61.437 66.667 31.76 11.88 40.75 6.13
2742 8334 1.969589 AAGCTTTGGGTTACCGCGG 60.970 57.895 26.86 26.86 40.75 6.46
2743 8335 1.209127 CAAGCTTTGGGTTACCGCG 59.791 57.895 0.00 0.00 40.75 6.46
2752 8344 4.653560 CCTAGAGGAGGCCAAGCTTTGG 62.654 59.091 5.01 3.18 45.70 3.28
2753 8345 1.407989 CCTAGAGGAGGCCAAGCTTTG 60.408 57.143 5.01 0.00 38.96 2.77
2754 8346 0.915364 CCTAGAGGAGGCCAAGCTTT 59.085 55.000 5.01 0.00 38.96 3.51
2755 8347 0.043334 TCCTAGAGGAGGCCAAGCTT 59.957 55.000 5.01 0.00 46.25 3.74
2756 8348 1.706575 TCCTAGAGGAGGCCAAGCT 59.293 57.895 5.01 0.00 46.25 3.74
2757 8349 4.382852 TCCTAGAGGAGGCCAAGC 57.617 61.111 5.01 0.00 46.25 4.01
2766 8358 6.985653 TTCTCCTTAACATCATCCTAGAGG 57.014 41.667 0.00 0.00 0.00 3.69
2767 8359 7.385267 CCATTCTCCTTAACATCATCCTAGAG 58.615 42.308 0.00 0.00 0.00 2.43
2768 8360 6.270927 CCCATTCTCCTTAACATCATCCTAGA 59.729 42.308 0.00 0.00 0.00 2.43
2769 8361 6.471146 CCCATTCTCCTTAACATCATCCTAG 58.529 44.000 0.00 0.00 0.00 3.02
2770 8362 5.221925 GCCCATTCTCCTTAACATCATCCTA 60.222 44.000 0.00 0.00 0.00 2.94
2771 8363 4.446889 GCCCATTCTCCTTAACATCATCCT 60.447 45.833 0.00 0.00 0.00 3.24
2772 8364 3.823304 GCCCATTCTCCTTAACATCATCC 59.177 47.826 0.00 0.00 0.00 3.51
2773 8365 3.499918 CGCCCATTCTCCTTAACATCATC 59.500 47.826 0.00 0.00 0.00 2.92
2774 8366 3.480470 CGCCCATTCTCCTTAACATCAT 58.520 45.455 0.00 0.00 0.00 2.45
2775 8367 2.421388 CCGCCCATTCTCCTTAACATCA 60.421 50.000 0.00 0.00 0.00 3.07
2776 8368 2.222027 CCGCCCATTCTCCTTAACATC 58.778 52.381 0.00 0.00 0.00 3.06
2777 8369 1.750682 GCCGCCCATTCTCCTTAACAT 60.751 52.381 0.00 0.00 0.00 2.71
2778 8370 0.393808 GCCGCCCATTCTCCTTAACA 60.394 55.000 0.00 0.00 0.00 2.41
2779 8371 1.436983 CGCCGCCCATTCTCCTTAAC 61.437 60.000 0.00 0.00 0.00 2.01
2780 8372 1.153249 CGCCGCCCATTCTCCTTAA 60.153 57.895 0.00 0.00 0.00 1.85
2781 8373 2.504032 CGCCGCCCATTCTCCTTA 59.496 61.111 0.00 0.00 0.00 2.69
2782 8374 4.489771 CCGCCGCCCATTCTCCTT 62.490 66.667 0.00 0.00 0.00 3.36
2814 8406 1.794222 CGAAATGCTCGGGTGTTCC 59.206 57.895 0.00 0.00 44.20 3.62
2823 8415 6.077838 ACTATTTGAAACGAACGAAATGCTC 58.922 36.000 0.14 0.00 0.00 4.26
2824 8416 5.997385 ACTATTTGAAACGAACGAAATGCT 58.003 33.333 0.14 0.00 0.00 3.79
2825 8417 5.283012 GGACTATTTGAAACGAACGAAATGC 59.717 40.000 0.14 0.00 0.00 3.56
2826 8418 6.367421 TGGACTATTTGAAACGAACGAAATG 58.633 36.000 0.14 0.00 0.00 2.32
2827 8419 6.548441 TGGACTATTTGAAACGAACGAAAT 57.452 33.333 0.14 0.00 0.00 2.17
2828 8420 5.987777 TGGACTATTTGAAACGAACGAAA 57.012 34.783 0.14 0.00 0.00 3.46
2829 8421 5.754406 TCTTGGACTATTTGAAACGAACGAA 59.246 36.000 0.14 0.00 0.00 3.85
2830 8422 5.176223 GTCTTGGACTATTTGAAACGAACGA 59.824 40.000 0.14 0.00 0.00 3.85
2831 8423 5.050634 TGTCTTGGACTATTTGAAACGAACG 60.051 40.000 0.00 0.00 33.15 3.95
2832 8424 6.295039 TGTCTTGGACTATTTGAAACGAAC 57.705 37.500 0.00 0.00 33.15 3.95
2833 8425 8.610248 TTATGTCTTGGACTATTTGAAACGAA 57.390 30.769 0.00 0.00 33.15 3.85
2834 8426 7.148474 GCTTATGTCTTGGACTATTTGAAACGA 60.148 37.037 0.00 0.00 33.15 3.85
2835 8427 6.961554 GCTTATGTCTTGGACTATTTGAAACG 59.038 38.462 0.00 0.00 33.15 3.60
2836 8428 7.816640 TGCTTATGTCTTGGACTATTTGAAAC 58.183 34.615 0.00 0.00 33.15 2.78
2837 8429 7.994425 TGCTTATGTCTTGGACTATTTGAAA 57.006 32.000 0.00 0.00 33.15 2.69
2838 8430 9.330063 CTATGCTTATGTCTTGGACTATTTGAA 57.670 33.333 0.00 0.00 33.15 2.69
2839 8431 8.486210 ACTATGCTTATGTCTTGGACTATTTGA 58.514 33.333 0.00 0.00 33.15 2.69
2840 8432 8.554528 CACTATGCTTATGTCTTGGACTATTTG 58.445 37.037 0.00 0.00 33.15 2.32
2841 8433 8.486210 TCACTATGCTTATGTCTTGGACTATTT 58.514 33.333 0.00 0.00 33.15 1.40
2842 8434 8.023021 TCACTATGCTTATGTCTTGGACTATT 57.977 34.615 0.00 0.00 33.15 1.73
2843 8435 7.256119 CCTCACTATGCTTATGTCTTGGACTAT 60.256 40.741 0.00 0.00 33.15 2.12
2844 8436 6.040955 CCTCACTATGCTTATGTCTTGGACTA 59.959 42.308 0.00 0.00 33.15 2.59
2845 8437 5.163364 CCTCACTATGCTTATGTCTTGGACT 60.163 44.000 0.00 0.00 33.15 3.85
2846 8438 5.053145 CCTCACTATGCTTATGTCTTGGAC 58.947 45.833 0.00 0.00 0.00 4.02
2847 8439 4.101585 CCCTCACTATGCTTATGTCTTGGA 59.898 45.833 0.00 0.00 0.00 3.53
2848 8440 4.101585 TCCCTCACTATGCTTATGTCTTGG 59.898 45.833 0.00 0.00 0.00 3.61
2849 8441 5.282055 TCCCTCACTATGCTTATGTCTTG 57.718 43.478 0.00 0.00 0.00 3.02
2850 8442 4.346418 CCTCCCTCACTATGCTTATGTCTT 59.654 45.833 0.00 0.00 0.00 3.01
2851 8443 3.900601 CCTCCCTCACTATGCTTATGTCT 59.099 47.826 0.00 0.00 0.00 3.41
2852 8444 3.556004 GCCTCCCTCACTATGCTTATGTC 60.556 52.174 0.00 0.00 0.00 3.06
2853 8445 2.370189 GCCTCCCTCACTATGCTTATGT 59.630 50.000 0.00 0.00 0.00 2.29
2854 8446 2.289945 GGCCTCCCTCACTATGCTTATG 60.290 54.545 0.00 0.00 0.00 1.90
2855 8447 1.981495 GGCCTCCCTCACTATGCTTAT 59.019 52.381 0.00 0.00 0.00 1.73
2856 8448 1.343985 TGGCCTCCCTCACTATGCTTA 60.344 52.381 3.32 0.00 0.00 3.09
2857 8449 0.621571 TGGCCTCCCTCACTATGCTT 60.622 55.000 3.32 0.00 0.00 3.91
2858 8450 0.401105 ATGGCCTCCCTCACTATGCT 60.401 55.000 3.32 0.00 0.00 3.79
2859 8451 0.250640 CATGGCCTCCCTCACTATGC 60.251 60.000 3.32 0.00 0.00 3.14
2860 8452 0.399454 CCATGGCCTCCCTCACTATG 59.601 60.000 3.32 0.00 0.00 2.23
2861 8453 1.422161 GCCATGGCCTCCCTCACTAT 61.422 60.000 27.24 0.00 34.56 2.12
2862 8454 2.072487 GCCATGGCCTCCCTCACTA 61.072 63.158 27.24 0.00 34.56 2.74
2863 8455 3.415087 GCCATGGCCTCCCTCACT 61.415 66.667 27.24 0.00 34.56 3.41
2864 8456 2.988839 AAGCCATGGCCTCCCTCAC 61.989 63.158 33.14 2.26 43.17 3.51
2865 8457 2.614969 AAGCCATGGCCTCCCTCA 60.615 61.111 33.14 0.00 43.17 3.86
2866 8458 2.123982 CAAGCCATGGCCTCCCTC 60.124 66.667 33.14 3.90 43.17 4.30
2867 8459 2.943265 ACAAGCCATGGCCTCCCT 60.943 61.111 33.14 11.80 43.17 4.20
2868 8460 1.635817 TAGACAAGCCATGGCCTCCC 61.636 60.000 33.14 19.37 38.06 4.30
2869 8461 0.475906 ATAGACAAGCCATGGCCTCC 59.524 55.000 33.14 19.01 38.06 4.30
2870 8462 1.952296 CAATAGACAAGCCATGGCCTC 59.048 52.381 33.14 23.30 38.06 4.70
2871 8463 1.410648 CCAATAGACAAGCCATGGCCT 60.411 52.381 33.14 23.75 38.06 5.19
2872 8464 1.035139 CCAATAGACAAGCCATGGCC 58.965 55.000 33.14 17.70 38.06 5.36
2873 8465 1.035139 CCCAATAGACAAGCCATGGC 58.965 55.000 30.12 30.12 42.33 4.40
2874 8466 1.063717 ACCCCAATAGACAAGCCATGG 60.064 52.381 7.63 7.63 0.00 3.66
2875 8467 2.442236 ACCCCAATAGACAAGCCATG 57.558 50.000 0.00 0.00 0.00 3.66
2876 8468 3.365472 GAAACCCCAATAGACAAGCCAT 58.635 45.455 0.00 0.00 0.00 4.40
2877 8469 2.802719 GAAACCCCAATAGACAAGCCA 58.197 47.619 0.00 0.00 0.00 4.75
2878 8470 1.743394 CGAAACCCCAATAGACAAGCC 59.257 52.381 0.00 0.00 0.00 4.35
2879 8471 2.706890 TCGAAACCCCAATAGACAAGC 58.293 47.619 0.00 0.00 0.00 4.01
2880 8472 4.700213 ACAATCGAAACCCCAATAGACAAG 59.300 41.667 0.00 0.00 0.00 3.16
2881 8473 4.658063 ACAATCGAAACCCCAATAGACAA 58.342 39.130 0.00 0.00 0.00 3.18
2882 8474 4.258543 GACAATCGAAACCCCAATAGACA 58.741 43.478 0.00 0.00 0.00 3.41
2883 8475 4.258543 TGACAATCGAAACCCCAATAGAC 58.741 43.478 0.00 0.00 0.00 2.59
2884 8476 4.561500 TGACAATCGAAACCCCAATAGA 57.438 40.909 0.00 0.00 0.00 1.98
2885 8477 5.835113 ATTGACAATCGAAACCCCAATAG 57.165 39.130 0.00 0.00 0.00 1.73
2886 8478 5.949354 AGAATTGACAATCGAAACCCCAATA 59.051 36.000 0.05 0.00 0.00 1.90
2887 8479 4.772100 AGAATTGACAATCGAAACCCCAAT 59.228 37.500 0.05 0.00 0.00 3.16
2888 8480 4.148838 AGAATTGACAATCGAAACCCCAA 58.851 39.130 0.05 0.00 0.00 4.12
2889 8481 3.756434 GAGAATTGACAATCGAAACCCCA 59.244 43.478 0.05 0.00 0.00 4.96
2890 8482 4.010349 AGAGAATTGACAATCGAAACCCC 58.990 43.478 0.05 0.00 0.00 4.95
2891 8483 5.629079 AAGAGAATTGACAATCGAAACCC 57.371 39.130 0.05 0.00 0.00 4.11
2892 8484 7.410485 GGATAAGAGAATTGACAATCGAAACC 58.590 38.462 0.05 0.00 0.00 3.27
2893 8485 7.065803 TGGGATAAGAGAATTGACAATCGAAAC 59.934 37.037 0.05 0.00 0.00 2.78
2894 8486 7.065803 GTGGGATAAGAGAATTGACAATCGAAA 59.934 37.037 0.05 0.00 0.00 3.46
2895 8487 6.538742 GTGGGATAAGAGAATTGACAATCGAA 59.461 38.462 0.05 0.00 0.00 3.71
2896 8488 6.049149 GTGGGATAAGAGAATTGACAATCGA 58.951 40.000 0.05 0.00 0.00 3.59
2897 8489 5.237344 GGTGGGATAAGAGAATTGACAATCG 59.763 44.000 0.05 0.00 0.00 3.34
2898 8490 6.122277 TGGTGGGATAAGAGAATTGACAATC 58.878 40.000 0.05 0.00 0.00 2.67
2899 8491 6.078456 TGGTGGGATAAGAGAATTGACAAT 57.922 37.500 0.00 0.00 0.00 2.71
2900 8492 5.512942 TGGTGGGATAAGAGAATTGACAA 57.487 39.130 0.00 0.00 0.00 3.18
2901 8493 5.715439 ATGGTGGGATAAGAGAATTGACA 57.285 39.130 0.00 0.00 0.00 3.58
2902 8494 6.122277 TGAATGGTGGGATAAGAGAATTGAC 58.878 40.000 0.00 0.00 0.00 3.18
2903 8495 6.325993 TGAATGGTGGGATAAGAGAATTGA 57.674 37.500 0.00 0.00 0.00 2.57
2904 8496 7.286087 TCAATGAATGGTGGGATAAGAGAATTG 59.714 37.037 0.00 0.00 0.00 2.32
2905 8497 7.286316 GTCAATGAATGGTGGGATAAGAGAATT 59.714 37.037 0.00 0.00 0.00 2.17
2906 8498 6.774656 GTCAATGAATGGTGGGATAAGAGAAT 59.225 38.462 0.00 0.00 0.00 2.40
2907 8499 6.122277 GTCAATGAATGGTGGGATAAGAGAA 58.878 40.000 0.00 0.00 0.00 2.87
2908 8500 5.684704 GTCAATGAATGGTGGGATAAGAGA 58.315 41.667 0.00 0.00 0.00 3.10
2909 8501 4.512944 CGTCAATGAATGGTGGGATAAGAG 59.487 45.833 0.00 0.00 0.00 2.85
2910 8502 4.450976 CGTCAATGAATGGTGGGATAAGA 58.549 43.478 0.00 0.00 0.00 2.10
2911 8503 3.565482 CCGTCAATGAATGGTGGGATAAG 59.435 47.826 0.00 0.00 0.00 1.73
2912 8504 3.201045 TCCGTCAATGAATGGTGGGATAA 59.799 43.478 3.19 0.00 0.00 1.75
2913 8505 2.774809 TCCGTCAATGAATGGTGGGATA 59.225 45.455 3.19 0.00 0.00 2.59
2914 8506 1.563879 TCCGTCAATGAATGGTGGGAT 59.436 47.619 3.19 0.00 0.00 3.85
2915 8507 0.988063 TCCGTCAATGAATGGTGGGA 59.012 50.000 3.19 0.00 0.00 4.37
2916 8508 1.340017 ACTCCGTCAATGAATGGTGGG 60.340 52.381 8.89 2.60 0.00 4.61
2917 8509 2.009774 GACTCCGTCAATGAATGGTGG 58.990 52.381 8.89 4.41 32.09 4.61
2918 8510 2.009774 GGACTCCGTCAATGAATGGTG 58.990 52.381 3.19 3.66 33.68 4.17
2919 8511 1.405526 CGGACTCCGTCAATGAATGGT 60.406 52.381 9.51 0.00 42.73 3.55
2920 8512 1.290203 CGGACTCCGTCAATGAATGG 58.710 55.000 9.51 0.00 42.73 3.16
2932 8524 3.842925 TTGGCACCTTGCGGACTCC 62.843 63.158 0.00 0.00 46.21 3.85
2933 8525 1.244019 AATTGGCACCTTGCGGACTC 61.244 55.000 0.00 0.00 46.21 3.36
2934 8526 1.228552 AATTGGCACCTTGCGGACT 60.229 52.632 0.00 0.00 46.21 3.85
2935 8527 1.080569 CAATTGGCACCTTGCGGAC 60.081 57.895 0.00 0.00 46.21 4.79
2936 8528 2.274645 CCAATTGGCACCTTGCGGA 61.275 57.895 12.53 0.00 46.21 5.54
2937 8529 2.216750 CTCCAATTGGCACCTTGCGG 62.217 60.000 20.33 0.00 46.21 5.69
2938 8530 1.213537 CTCCAATTGGCACCTTGCG 59.786 57.895 20.33 0.00 46.21 4.85
2939 8531 1.187567 ACCTCCAATTGGCACCTTGC 61.188 55.000 20.33 0.00 44.08 4.01
2940 8532 0.604578 CACCTCCAATTGGCACCTTG 59.395 55.000 20.33 8.11 34.44 3.61
2941 8533 0.188342 ACACCTCCAATTGGCACCTT 59.812 50.000 20.33 0.73 34.44 3.50
2942 8534 0.251341 GACACCTCCAATTGGCACCT 60.251 55.000 20.33 0.41 34.44 4.00
2943 8535 1.250840 GGACACCTCCAATTGGCACC 61.251 60.000 20.33 11.58 36.42 5.01
2944 8536 0.539438 TGGACACCTCCAATTGGCAC 60.539 55.000 20.33 6.71 44.26 5.01
2945 8537 1.849832 TGGACACCTCCAATTGGCA 59.150 52.632 20.33 7.10 44.26 4.92
2946 8538 4.841441 TGGACACCTCCAATTGGC 57.159 55.556 20.33 4.26 44.26 4.52
2953 8545 0.036732 TTGCTCACATGGACACCTCC 59.963 55.000 0.00 0.00 37.04 4.30
2954 8546 1.002430 TCTTGCTCACATGGACACCTC 59.998 52.381 0.00 0.00 0.00 3.85
2955 8547 1.059098 TCTTGCTCACATGGACACCT 58.941 50.000 0.00 0.00 0.00 4.00
2956 8548 1.160137 GTCTTGCTCACATGGACACC 58.840 55.000 0.00 0.00 32.54 4.16
2957 8549 1.160137 GGTCTTGCTCACATGGACAC 58.840 55.000 0.00 0.00 33.35 3.67
2958 8550 0.764271 TGGTCTTGCTCACATGGACA 59.236 50.000 0.00 0.00 33.35 4.02
2959 8551 1.808945 CTTGGTCTTGCTCACATGGAC 59.191 52.381 0.00 0.00 0.00 4.02
2960 8552 1.883638 GCTTGGTCTTGCTCACATGGA 60.884 52.381 0.00 0.00 0.00 3.41
2961 8553 0.524862 GCTTGGTCTTGCTCACATGG 59.475 55.000 0.00 0.00 0.00 3.66
2962 8554 1.531423 AGCTTGGTCTTGCTCACATG 58.469 50.000 0.00 0.00 33.90 3.21
2963 8555 2.157738 GAAGCTTGGTCTTGCTCACAT 58.842 47.619 2.10 0.00 38.75 3.21
2964 8556 1.141657 AGAAGCTTGGTCTTGCTCACA 59.858 47.619 2.10 0.00 38.75 3.58
2965 8557 1.534595 CAGAAGCTTGGTCTTGCTCAC 59.465 52.381 2.10 0.00 38.75 3.51
2966 8558 1.417517 TCAGAAGCTTGGTCTTGCTCA 59.582 47.619 2.10 0.00 38.75 4.26
2967 8559 2.175878 TCAGAAGCTTGGTCTTGCTC 57.824 50.000 2.10 0.00 38.75 4.26
2968 8560 2.645838 TTCAGAAGCTTGGTCTTGCT 57.354 45.000 2.10 0.00 41.82 3.91
2969 8561 2.816087 TCATTCAGAAGCTTGGTCTTGC 59.184 45.455 2.10 0.00 0.00 4.01
2970 8562 5.182570 TCAATCATTCAGAAGCTTGGTCTTG 59.817 40.000 2.10 0.00 0.00 3.02
2971 8563 5.319453 TCAATCATTCAGAAGCTTGGTCTT 58.681 37.500 2.10 0.00 0.00 3.01
2972 8564 4.914983 TCAATCATTCAGAAGCTTGGTCT 58.085 39.130 2.10 0.00 0.00 3.85
2973 8565 5.589452 AGATCAATCATTCAGAAGCTTGGTC 59.411 40.000 2.10 7.06 28.40 4.02
2974 8566 5.507637 AGATCAATCATTCAGAAGCTTGGT 58.492 37.500 2.10 0.00 0.00 3.67
2975 8567 5.008811 GGAGATCAATCATTCAGAAGCTTGG 59.991 44.000 2.10 0.00 0.00 3.61
2976 8568 5.589050 TGGAGATCAATCATTCAGAAGCTTG 59.411 40.000 2.10 0.00 0.00 4.01
2977 8569 5.752650 TGGAGATCAATCATTCAGAAGCTT 58.247 37.500 0.00 0.00 0.00 3.74
2978 8570 5.130643 TCTGGAGATCAATCATTCAGAAGCT 59.869 40.000 0.00 0.00 31.56 3.74
2979 8571 5.366460 TCTGGAGATCAATCATTCAGAAGC 58.634 41.667 0.00 0.00 31.56 3.86
2980 8572 5.467399 GCTCTGGAGATCAATCATTCAGAAG 59.533 44.000 1.35 0.00 32.96 2.85
2981 8573 5.366460 GCTCTGGAGATCAATCATTCAGAA 58.634 41.667 1.35 0.00 32.96 3.02
2982 8574 4.202336 GGCTCTGGAGATCAATCATTCAGA 60.202 45.833 1.35 0.00 32.65 3.27
2983 8575 4.066490 GGCTCTGGAGATCAATCATTCAG 58.934 47.826 1.35 0.00 0.00 3.02
2984 8576 3.715315 AGGCTCTGGAGATCAATCATTCA 59.285 43.478 1.35 0.00 0.00 2.57
2985 8577 4.354893 AGGCTCTGGAGATCAATCATTC 57.645 45.455 1.35 0.00 0.00 2.67
2986 8578 5.745476 GCTTAGGCTCTGGAGATCAATCATT 60.745 44.000 1.35 0.00 35.22 2.57
2987 8579 4.262981 GCTTAGGCTCTGGAGATCAATCAT 60.263 45.833 1.35 0.00 35.22 2.45
2988 8580 3.070734 GCTTAGGCTCTGGAGATCAATCA 59.929 47.826 1.35 0.00 35.22 2.57
2989 8581 3.663025 GCTTAGGCTCTGGAGATCAATC 58.337 50.000 1.35 0.00 35.22 2.67
2990 8582 2.036992 CGCTTAGGCTCTGGAGATCAAT 59.963 50.000 1.35 0.00 36.09 2.57
2991 8583 1.410517 CGCTTAGGCTCTGGAGATCAA 59.589 52.381 1.35 0.00 36.09 2.57
2992 8584 1.035923 CGCTTAGGCTCTGGAGATCA 58.964 55.000 1.35 0.00 36.09 2.92
2993 8585 1.036707 ACGCTTAGGCTCTGGAGATC 58.963 55.000 1.35 0.00 36.09 2.75
2994 8586 0.749649 CACGCTTAGGCTCTGGAGAT 59.250 55.000 1.35 0.00 36.09 2.75
2995 8587 0.612174 ACACGCTTAGGCTCTGGAGA 60.612 55.000 1.35 0.00 36.09 3.71
2996 8588 1.103803 TACACGCTTAGGCTCTGGAG 58.896 55.000 0.00 0.00 36.09 3.86
2997 8589 0.815734 GTACACGCTTAGGCTCTGGA 59.184 55.000 0.00 0.00 36.09 3.86
2998 8590 0.179108 GGTACACGCTTAGGCTCTGG 60.179 60.000 0.00 0.00 36.09 3.86
2999 8591 0.525668 CGGTACACGCTTAGGCTCTG 60.526 60.000 0.00 0.00 36.09 3.35
3000 8592 0.679002 TCGGTACACGCTTAGGCTCT 60.679 55.000 0.00 0.00 43.86 4.09
3001 8593 0.525029 GTCGGTACACGCTTAGGCTC 60.525 60.000 0.00 0.00 43.86 4.70
3002 8594 1.246056 TGTCGGTACACGCTTAGGCT 61.246 55.000 0.00 0.00 43.86 4.58
3003 8595 1.074872 GTGTCGGTACACGCTTAGGC 61.075 60.000 0.00 0.00 46.11 3.93
3004 8596 3.025866 GTGTCGGTACACGCTTAGG 57.974 57.895 0.00 0.00 46.11 2.69
3012 8604 3.887110 TCTCTTCTTCAAGTGTCGGTACA 59.113 43.478 0.00 0.00 0.00 2.90
3013 8605 4.500603 TCTCTTCTTCAAGTGTCGGTAC 57.499 45.455 0.00 0.00 0.00 3.34
3014 8606 4.523173 ACATCTCTTCTTCAAGTGTCGGTA 59.477 41.667 0.00 0.00 0.00 4.02
3015 8607 3.322254 ACATCTCTTCTTCAAGTGTCGGT 59.678 43.478 0.00 0.00 0.00 4.69
3016 8608 3.677121 CACATCTCTTCTTCAAGTGTCGG 59.323 47.826 0.00 0.00 0.00 4.79
3017 8609 3.122613 GCACATCTCTTCTTCAAGTGTCG 59.877 47.826 0.00 0.00 0.00 4.35
3018 8610 4.060900 TGCACATCTCTTCTTCAAGTGTC 58.939 43.478 0.00 0.00 0.00 3.67
3019 8611 3.812053 GTGCACATCTCTTCTTCAAGTGT 59.188 43.478 13.17 0.00 0.00 3.55
3020 8612 3.188048 GGTGCACATCTCTTCTTCAAGTG 59.812 47.826 20.43 0.00 0.00 3.16
3021 8613 3.406764 GGTGCACATCTCTTCTTCAAGT 58.593 45.455 20.43 0.00 0.00 3.16
3022 8614 2.746362 GGGTGCACATCTCTTCTTCAAG 59.254 50.000 20.43 0.00 0.00 3.02
3023 8615 2.783135 GGGTGCACATCTCTTCTTCAA 58.217 47.619 20.43 0.00 0.00 2.69
3024 8616 1.338105 CGGGTGCACATCTCTTCTTCA 60.338 52.381 20.43 0.00 0.00 3.02
3025 8617 1.338200 ACGGGTGCACATCTCTTCTTC 60.338 52.381 20.43 0.00 0.00 2.87
3026 8618 0.687354 ACGGGTGCACATCTCTTCTT 59.313 50.000 20.43 0.00 0.00 2.52
3027 8619 0.687354 AACGGGTGCACATCTCTTCT 59.313 50.000 20.43 0.00 0.00 2.85
3028 8620 1.464997 GAAACGGGTGCACATCTCTTC 59.535 52.381 20.43 10.24 0.00 2.87
3029 8621 1.072331 AGAAACGGGTGCACATCTCTT 59.928 47.619 20.43 4.65 0.00 2.85
3030 8622 0.687354 AGAAACGGGTGCACATCTCT 59.313 50.000 20.43 9.51 0.00 3.10
3031 8623 1.197721 CAAGAAACGGGTGCACATCTC 59.802 52.381 20.43 7.31 0.00 2.75
3032 8624 1.238439 CAAGAAACGGGTGCACATCT 58.762 50.000 20.43 10.44 0.00 2.90
3033 8625 0.951558 ACAAGAAACGGGTGCACATC 59.048 50.000 20.43 9.26 0.00 3.06
3034 8626 1.336755 GAACAAGAAACGGGTGCACAT 59.663 47.619 20.43 0.00 0.00 3.21
3035 8627 0.736053 GAACAAGAAACGGGTGCACA 59.264 50.000 20.43 0.00 0.00 4.57
3036 8628 1.002792 GAGAACAAGAAACGGGTGCAC 60.003 52.381 8.80 8.80 0.00 4.57
3037 8629 1.134220 AGAGAACAAGAAACGGGTGCA 60.134 47.619 0.00 0.00 0.00 4.57
3038 8630 1.594331 AGAGAACAAGAAACGGGTGC 58.406 50.000 0.00 0.00 0.00 5.01
3039 8631 4.632538 AAAAGAGAACAAGAAACGGGTG 57.367 40.909 0.00 0.00 0.00 4.61
3040 8632 5.187687 TGTAAAAGAGAACAAGAAACGGGT 58.812 37.500 0.00 0.00 0.00 5.28
3041 8633 5.744666 TGTAAAAGAGAACAAGAAACGGG 57.255 39.130 0.00 0.00 0.00 5.28
3042 8634 7.015877 GCTATGTAAAAGAGAACAAGAAACGG 58.984 38.462 0.00 0.00 0.00 4.44
3043 8635 7.742089 CAGCTATGTAAAAGAGAACAAGAAACG 59.258 37.037 0.00 0.00 0.00 3.60
3044 8636 8.017946 CCAGCTATGTAAAAGAGAACAAGAAAC 58.982 37.037 0.00 0.00 0.00 2.78
3045 8637 7.308589 GCCAGCTATGTAAAAGAGAACAAGAAA 60.309 37.037 0.00 0.00 0.00 2.52
3046 8638 6.149474 GCCAGCTATGTAAAAGAGAACAAGAA 59.851 38.462 0.00 0.00 0.00 2.52
3047 8639 5.643777 GCCAGCTATGTAAAAGAGAACAAGA 59.356 40.000 0.00 0.00 0.00 3.02
3048 8640 5.412594 TGCCAGCTATGTAAAAGAGAACAAG 59.587 40.000 0.00 0.00 0.00 3.16
3049 8641 5.312895 TGCCAGCTATGTAAAAGAGAACAA 58.687 37.500 0.00 0.00 0.00 2.83
3050 8642 4.905429 TGCCAGCTATGTAAAAGAGAACA 58.095 39.130 0.00 0.00 0.00 3.18
3051 8643 5.880054 TTGCCAGCTATGTAAAAGAGAAC 57.120 39.130 0.00 0.00 0.00 3.01
3052 8644 5.415701 CCTTTGCCAGCTATGTAAAAGAGAA 59.584 40.000 0.00 0.00 32.57 2.87
3053 8645 4.943705 CCTTTGCCAGCTATGTAAAAGAGA 59.056 41.667 0.00 0.00 32.57 3.10
3054 8646 4.439289 GCCTTTGCCAGCTATGTAAAAGAG 60.439 45.833 0.00 0.00 32.57 2.85
3055 8647 3.443681 GCCTTTGCCAGCTATGTAAAAGA 59.556 43.478 0.00 0.00 32.57 2.52
3056 8648 3.774066 GCCTTTGCCAGCTATGTAAAAG 58.226 45.455 0.00 0.00 31.50 2.27
3057 8649 3.866883 GCCTTTGCCAGCTATGTAAAA 57.133 42.857 0.00 0.00 0.00 1.52
3070 8662 4.032356 GCAAACTGTGGCCTTTGC 57.968 55.556 20.41 20.41 43.94 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.