AutoCloner

Multiple sequence alignment - TraesCS1A01G341500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS1A01G341500	chr1A	100.000	9141	0	0	1	9141	531060229	531051089	0.000000e+00	16881.0
1	TraesCS1A01G341500	chr1A	82.620	1588	194	39	6678	8209	531017411	531015850	0.000000e+00	1328.0
2	TraesCS1A01G341500	chr1A	86.234	632	50	15	5881	6511	531018359	531017764	0.000000e+00	651.0
3	TraesCS1A01G341500	chr1A	88.108	185	20	2	6498	6681	531017642	531017459	1.550000e-52	219.0
4	TraesCS1A01G341500	chr1A	100.000	85	0	0	8709	8793	531015377	531015293	3.420000e-34	158.0
5	TraesCS1A01G341500	chr1D	94.615	7781	287	68	559	8264	432715004	432707281	0.000000e+00	11926.0
6	TraesCS1A01G341500	chr1D	83.609	1690	191	52	4869	6513	432403896	432402248	0.000000e+00	1507.0
7	TraesCS1A01G341500	chr1D	84.629	579	42	24	8602	9141	432706863	432706293	4.860000e-147	532.0
8	TraesCS1A01G341500	chr1D	88.830	376	33	7	8273	8644	432707230	432706860	3.890000e-123	453.0
9	TraesCS1A01G341500	chr1D	84.091	308	34	10	3987	4282	432711692	432711388	5.400000e-72	283.0
10	TraesCS1A01G341500	chr1D	83.882	304	40	3	3883	4186	432711586	432711292	1.940000e-71	281.0
11	TraesCS1A01G341500	chr1D	87.432	183	20	3	6498	6680	432402128	432401949	3.350000e-49	207.0
12	TraesCS1A01G341500	chr1D	82.192	219	21	11	8691	8905	432400491	432400287	1.220000e-38	172.0
13	TraesCS1A01G341500	chr1D	81.193	218	30	8	8055	8266	432401050	432400838	2.040000e-36	165.0
14	TraesCS1A01G341500	chr1B	93.470	3231	152	17	3694	6884	584112855	584109644	0.000000e+00	4743.0
15	TraesCS1A01G341500	chr1B	94.385	3063	122	29	651	3695	584116009	584112979	0.000000e+00	4658.0
16	TraesCS1A01G341500	chr1B	94.576	1438	70	6	6834	8268	584109641	584108209	0.000000e+00	2217.0
17	TraesCS1A01G341500	chr1B	84.293	1528	167	36	4918	6425	583982052	583980578	0.000000e+00	1424.0
18	TraesCS1A01G341500	chr1B	81.379	1117	148	32	7124	8209	583976068	583974981	0.000000e+00	856.0
19	TraesCS1A01G341500	chr1B	88.283	367	35	5	8273	8639	584108160	584107802	5.070000e-117	433.0
20	TraesCS1A01G341500	chr1B	83.224	304	42	5	3987	4281	584112667	584112364	4.210000e-68	270.0
21	TraesCS1A01G341500	chr1B	88.710	186	20	1	6496	6681	583979726	583979542	9.240000e-55	226.0
22	TraesCS1A01G341500	chr1B	95.050	101	5	0	8693	8793	583974546	583974446	9.500000e-35	159.0
23	TraesCS1A01G341500	chr3D	77.468	790	152	18	5656	6434	381636895	381636121	5.030000e-122	449.0
24	TraesCS1A01G341500	chr3D	96.774	93	3	0	8697	8789	16502662	16502570	1.230000e-33	156.0
25	TraesCS1A01G341500	chr3D	93.939	99	3	2	8697	8793	546330127	546330224	7.400000e-31	147.0
26	TraesCS1A01G341500	chr5B	85.502	269	31	6	2	269	493983077	493982816	3.250000e-69	274.0
27	TraesCS1A01G341500	chr5B	100.000	29	0	0	7850	7878	474774657	474774685	5.000000e-03	54.7
28	TraesCS1A01G341500	chr3A	78.344	471	65	27	1	468	362547510	362547074	4.210000e-68	270.0
29	TraesCS1A01G341500	chr3A	88.618	123	8	5	8694	8813	513932834	513932953	2.660000e-30	145.0
30	TraesCS1A01G341500	chr5D	84.411	263	32	6	2	262	344527409	344527154	5.480000e-62	250.0
31	TraesCS1A01G341500	chr5A	83.650	263	34	6	2	262	447549139	447549394	1.190000e-58	239.0
32	TraesCS1A01G341500	chr2A	88.360	189	22	0	2	190	4509918	4509730	2.570000e-55	228.0
33	TraesCS1A01G341500	chr2A	94.737	95	3	2	8691	8784	527901874	527901781	7.400000e-31	147.0
34	TraesCS1A01G341500	chr7D	86.432	199	21	1	7	199	139002649	139002847	7.190000e-51	213.0
35	TraesCS1A01G341500	chr6D	93.269	104	4	3	8697	8798	306134939	306134837	5.720000e-32	150.0
36	TraesCS1A01G341500	chr6B	93.069	101	4	3	8697	8797	473060905	473060808	2.660000e-30	145.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS1A01G341500	chr1A	531051089	531060229	9140	True	16881.00	16881	100.0000	1	9141	1	chr1A.!!$R1	9140
1	TraesCS1A01G341500	chr1A	531015293	531018359	3066	True	589.00	1328	89.2405	5881	8793	4	chr1A.!!$R2	2912
2	TraesCS1A01G341500	chr1D	432706293	432715004	8711	True	2695.00	11926	87.2094	559	9141	5	chr1D.!!$R2	8582
3	TraesCS1A01G341500	chr1D	432400287	432403896	3609	True	512.75	1507	83.6065	4869	8905	4	chr1D.!!$R1	4036
4	TraesCS1A01G341500	chr1B	584107802	584116009	8207	True	2464.20	4743	90.7876	651	8639	5	chr1B.!!$R2	7988
5	TraesCS1A01G341500	chr1B	583974446	583982052	7606	True	666.25	1424	87.3580	4918	8793	4	chr1B.!!$R1	3875
6	TraesCS1A01G341500	chr3D	381636121	381636895	774	True	449.00	449	77.4680	5656	6434	1	chr3D.!!$R2	778

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
308	309	0.033503	TGTGAGAGGGATGAGCGGTA	60.034	55.000	0.00	0.00	4.02	F
699	707	0.035458	CTCCCTCACTCACCCACAAC	59.965	60.000	0.00	0.00	3.32	F
1560	1583	0.100682	TTCGCTATGCCGTCAGAGTC	59.899	55.000	0.00	34.19	3.36	F
2055	2083	0.322277	CTGCCAGGCTTCAGTGTGAT	60.322	55.000	14.15	0.00	3.06	F
2488	2516	1.382522	CTGCCTTCAATGGTACGCAT	58.617	50.000	0.00	0.00	4.73	F
2726	2755	1.463674	CGGGGCTTTAACATGCTTCT	58.536	50.000	0.00	0.00	2.85	F
3986	4146	1.943340	GGAAGAAAGGAATAGGCTGCG	59.057	52.381	0.00	0.00	5.18	F
4997	5160	0.951558	ACATTGGTGAAAGTGGCGAC	59.048	50.000	0.00	0.00	5.19	F
6287	6580	0.235926	GCGGACAAGCAAAGACACTC	59.764	55.000	0.00	37.05	3.51	F
7399	11638	6.095377	GCTGATCACATTAAACCAAAAGAGG	58.905	40.000	0.00	0.00	3.69	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1889	1917	0.383949	GCAGCTCACGAAACCCAAAA	59.616	50.000	0.00	0.00	0.00	2.44	R
2055	2083	0.626382	ACTCACCTCCTCGAGATCCA	59.374	55.000	15.71	0.00	33.33	3.41	R
2705	2734	1.604147	AAGCATGTTAAAGCCCCGCC	61.604	55.000	0.00	0.00	0.00	6.13	R
2903	2932	1.798626	AGATCAGCATAGGACCTGCA	58.201	50.000	3.53	0.00	42.15	4.41	R
4182	4342	0.109504	TTAACCGGCGAGCATTTTGC	60.110	50.000	9.30	0.00	45.46	3.68	R
4716	4876	2.739913	CAAATTGGAGCCTGCACAAATG	59.260	45.455	0.00	3.60	0.00	2.32	R
5068	5255	3.327757	TGTACCCTGAGAAGCAAATGAGT	59.672	43.478	0.00	0.00	0.00	3.41	R
6917	8137	0.250467	ATCGGCATAATTGGAGCGCT	60.250	50.000	11.27	11.27	0.00	5.92	R
7423	11662	0.656259	CATCTGCATTCACCTCAGCG	59.344	55.000	0.00	0.00	0.00	5.18	R
8877	13383	0.035458	CAGTGGATAGGGGCGATTCC	59.965	60.000	0.00	0.00	0.00	3.01	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
24	25	7.608308	AATCTCTTCTCTGTATTCTTGCAAC	57.392	36.000	0.00	0.00	0.00	4.17
25	26	6.101650	TCTCTTCTCTGTATTCTTGCAACA	57.898	37.500	0.00	0.00	0.00	3.33
26	27	6.524734	TCTCTTCTCTGTATTCTTGCAACAA	58.475	36.000	0.00	0.00	0.00	2.83
27	28	6.992123	TCTCTTCTCTGTATTCTTGCAACAAA	59.008	34.615	0.00	0.00	0.00	2.83
28	29	7.498900	TCTCTTCTCTGTATTCTTGCAACAAAA	59.501	33.333	0.00	0.00	0.00	2.44
29	30	8.169977	TCTTCTCTGTATTCTTGCAACAAAAT	57.830	30.769	0.00	0.00	0.00	1.82
30	31	8.292448	TCTTCTCTGTATTCTTGCAACAAAATC	58.708	33.333	0.00	0.00	0.00	2.17
31	32	6.913170	TCTCTGTATTCTTGCAACAAAATCC	58.087	36.000	0.00	0.00	0.00	3.01
32	33	6.716628	TCTCTGTATTCTTGCAACAAAATCCT	59.283	34.615	0.00	0.00	0.00	3.24
33	34	7.231317	TCTCTGTATTCTTGCAACAAAATCCTT	59.769	33.333	0.00	0.00	0.00	3.36
34	35	7.725251	TCTGTATTCTTGCAACAAAATCCTTT	58.275	30.769	0.00	0.00	0.00	3.11
35	36	7.867403	TCTGTATTCTTGCAACAAAATCCTTTC	59.133	33.333	0.00	0.00	0.00	2.62
36	37	7.725251	TGTATTCTTGCAACAAAATCCTTTCT	58.275	30.769	0.00	0.00	0.00	2.52
37	38	7.652909	TGTATTCTTGCAACAAAATCCTTTCTG	59.347	33.333	0.00	0.00	0.00	3.02
38	39	4.370917	TCTTGCAACAAAATCCTTTCTGC	58.629	39.130	0.00	0.00	33.67	4.26
39	40	3.815856	TGCAACAAAATCCTTTCTGCA	57.184	38.095	0.00	0.00	37.76	4.41
40	41	4.134379	TGCAACAAAATCCTTTCTGCAA	57.866	36.364	0.00	0.00	37.42	4.08
41	42	4.511527	TGCAACAAAATCCTTTCTGCAAA	58.488	34.783	0.00	0.00	37.42	3.68
42	43	4.571580	TGCAACAAAATCCTTTCTGCAAAG	59.428	37.500	0.00	0.00	37.42	2.77
43	44	4.571984	GCAACAAAATCCTTTCTGCAAAGT	59.428	37.500	0.00	0.00	37.87	2.66
44	45	5.065090	GCAACAAAATCCTTTCTGCAAAGTT	59.935	36.000	0.00	0.00	37.87	2.66
45	46	6.403527	GCAACAAAATCCTTTCTGCAAAGTTT	60.404	34.615	0.00	0.00	37.87	2.66
46	47	6.667007	ACAAAATCCTTTCTGCAAAGTTTG	57.333	33.333	11.41	11.41	38.20	2.93
60	61	5.542616	CAAAGTTTGCAACAATGTTTCCA	57.457	34.783	0.00	0.00	0.00	3.53
61	62	5.561993	CAAAGTTTGCAACAATGTTTCCAG	58.438	37.500	0.00	0.00	0.00	3.86
62	63	3.197265	AGTTTGCAACAATGTTTCCAGC	58.803	40.909	0.00	0.00	0.00	4.85
63	64	1.850377	TTGCAACAATGTTTCCAGCG	58.150	45.000	0.00	0.00	0.00	5.18
64	65	0.743688	TGCAACAATGTTTCCAGCGT	59.256	45.000	0.00	0.00	0.00	5.07
65	66	1.268999	TGCAACAATGTTTCCAGCGTC	60.269	47.619	0.00	0.00	0.00	5.19
66	67	1.001378	GCAACAATGTTTCCAGCGTCT	60.001	47.619	0.00	0.00	0.00	4.18
67	68	2.543653	GCAACAATGTTTCCAGCGTCTT	60.544	45.455	0.00	0.00	0.00	3.01
68	69	3.300009	CAACAATGTTTCCAGCGTCTTC	58.700	45.455	0.00	0.00	0.00	2.87
69	70	2.851195	ACAATGTTTCCAGCGTCTTCT	58.149	42.857	0.00	0.00	0.00	2.85
70	71	2.808543	ACAATGTTTCCAGCGTCTTCTC	59.191	45.455	0.00	0.00	0.00	2.87
71	72	3.070018	CAATGTTTCCAGCGTCTTCTCT	58.930	45.455	0.00	0.00	0.00	3.10
72	73	2.154854	TGTTTCCAGCGTCTTCTCTG	57.845	50.000	0.00	0.00	0.00	3.35
73	74	1.412710	TGTTTCCAGCGTCTTCTCTGT	59.587	47.619	0.00	0.00	0.00	3.41
74	75	2.626266	TGTTTCCAGCGTCTTCTCTGTA	59.374	45.455	0.00	0.00	0.00	2.74
75	76	3.258372	TGTTTCCAGCGTCTTCTCTGTAT	59.742	43.478	0.00	0.00	0.00	2.29
76	77	4.246458	GTTTCCAGCGTCTTCTCTGTATT	58.754	43.478	0.00	0.00	0.00	1.89
77	78	3.784701	TCCAGCGTCTTCTCTGTATTC	57.215	47.619	0.00	0.00	0.00	1.75
78	79	2.427453	TCCAGCGTCTTCTCTGTATTCC	59.573	50.000	0.00	0.00	0.00	3.01
79	80	2.428890	CCAGCGTCTTCTCTGTATTCCT	59.571	50.000	0.00	0.00	0.00	3.36
80	81	3.443037	CAGCGTCTTCTCTGTATTCCTG	58.557	50.000	0.00	0.00	0.00	3.86
81	82	2.159170	AGCGTCTTCTCTGTATTCCTGC	60.159	50.000	0.00	0.00	0.00	4.85
82	83	2.417379	GCGTCTTCTCTGTATTCCTGCA	60.417	50.000	0.00	0.00	0.00	4.41
83	84	3.849911	CGTCTTCTCTGTATTCCTGCAA	58.150	45.455	0.00	0.00	0.00	4.08
84	85	3.614616	CGTCTTCTCTGTATTCCTGCAAC	59.385	47.826	0.00	0.00	0.00	4.17
85	86	4.569943	GTCTTCTCTGTATTCCTGCAACA	58.430	43.478	0.00	0.00	0.00	3.33
86	87	4.997395	GTCTTCTCTGTATTCCTGCAACAA	59.003	41.667	0.00	0.00	0.00	2.83
87	88	5.121454	GTCTTCTCTGTATTCCTGCAACAAG	59.879	44.000	0.00	0.00	0.00	3.16
88	89	4.890158	TCTCTGTATTCCTGCAACAAGA	57.110	40.909	0.00	0.00	0.00	3.02
89	90	4.569943	TCTCTGTATTCCTGCAACAAGAC	58.430	43.478	0.00	0.00	0.00	3.01
90	91	4.284490	TCTCTGTATTCCTGCAACAAGACT	59.716	41.667	4.28	0.00	0.00	3.24
91	92	4.973168	TCTGTATTCCTGCAACAAGACTT	58.027	39.130	4.28	0.00	0.00	3.01
92	93	5.376625	TCTGTATTCCTGCAACAAGACTTT	58.623	37.500	4.28	0.00	0.00	2.66
93	94	5.827797	TCTGTATTCCTGCAACAAGACTTTT	59.172	36.000	4.28	0.00	0.00	2.27
94	95	5.830912	TGTATTCCTGCAACAAGACTTTTG	58.169	37.500	4.28	0.00	0.00	2.44
95	96	5.359576	TGTATTCCTGCAACAAGACTTTTGT	59.640	36.000	4.28	0.00	0.00	2.83
129	130	4.771590	GGAACAAAGATCATGTTGCAGA	57.228	40.909	22.32	0.00	45.18	4.26
130	131	5.125100	GGAACAAAGATCATGTTGCAGAA	57.875	39.130	22.32	0.00	45.18	3.02
131	132	5.531634	GGAACAAAGATCATGTTGCAGAAA	58.468	37.500	22.32	0.00	45.18	2.52
132	133	5.984926	GGAACAAAGATCATGTTGCAGAAAA	59.015	36.000	22.32	0.00	45.18	2.29
133	134	6.074142	GGAACAAAGATCATGTTGCAGAAAAC	60.074	38.462	22.32	8.18	45.18	2.43
134	135	4.977963	ACAAAGATCATGTTGCAGAAAACG	59.022	37.500	0.00	0.00	32.47	3.60
135	136	4.836125	AAGATCATGTTGCAGAAAACGT	57.164	36.364	0.00	0.00	32.47	3.99
136	137	4.151258	AGATCATGTTGCAGAAAACGTG	57.849	40.909	2.60	2.60	44.80	4.49
140	141	3.951306	CATGTTGCAGAAAACGTGAAGA	58.049	40.909	2.85	0.00	45.81	2.87
141	142	3.673746	TGTTGCAGAAAACGTGAAGAG	57.326	42.857	0.00	0.00	32.47	2.85
142	143	3.266636	TGTTGCAGAAAACGTGAAGAGA	58.733	40.909	0.00	0.00	32.47	3.10
143	144	3.309682	TGTTGCAGAAAACGTGAAGAGAG	59.690	43.478	0.00	0.00	32.47	3.20
144	145	3.452755	TGCAGAAAACGTGAAGAGAGA	57.547	42.857	0.00	0.00	0.00	3.10
145	146	3.384668	TGCAGAAAACGTGAAGAGAGAG	58.615	45.455	0.00	0.00	0.00	3.20
146	147	3.068165	TGCAGAAAACGTGAAGAGAGAGA	59.932	43.478	0.00	0.00	0.00	3.10
147	148	4.241681	GCAGAAAACGTGAAGAGAGAGAT	58.758	43.478	0.00	0.00	0.00	2.75
148	149	5.048013	TGCAGAAAACGTGAAGAGAGAGATA	60.048	40.000	0.00	0.00	0.00	1.98
149	150	5.514914	GCAGAAAACGTGAAGAGAGAGATAG	59.485	44.000	0.00	0.00	0.00	2.08
150	151	6.623986	GCAGAAAACGTGAAGAGAGAGATAGA	60.624	42.308	0.00	0.00	0.00	1.98
151	152	6.966632	CAGAAAACGTGAAGAGAGAGATAGAG	59.033	42.308	0.00	0.00	0.00	2.43
152	153	6.882140	AGAAAACGTGAAGAGAGAGATAGAGA	59.118	38.462	0.00	0.00	0.00	3.10
153	154	6.677781	AAACGTGAAGAGAGAGATAGAGAG	57.322	41.667	0.00	0.00	0.00	3.20
154	155	4.703897	ACGTGAAGAGAGAGATAGAGAGG	58.296	47.826	0.00	0.00	0.00	3.69
155	156	4.065088	CGTGAAGAGAGAGATAGAGAGGG	58.935	52.174	0.00	0.00	0.00	4.30
156	157	4.202315	CGTGAAGAGAGAGATAGAGAGGGA	60.202	50.000	0.00	0.00	0.00	4.20
157	158	5.686387	CGTGAAGAGAGAGATAGAGAGGGAA	60.686	48.000	0.00	0.00	0.00	3.97
158	159	6.126409	GTGAAGAGAGAGATAGAGAGGGAAA	58.874	44.000	0.00	0.00	0.00	3.13
159	160	6.263168	GTGAAGAGAGAGATAGAGAGGGAAAG	59.737	46.154	0.00	0.00	0.00	2.62
160	161	4.729868	AGAGAGAGATAGAGAGGGAAAGC	58.270	47.826	0.00	0.00	0.00	3.51
161	162	4.416848	AGAGAGAGATAGAGAGGGAAAGCT	59.583	45.833	0.00	0.00	0.00	3.74
162	163	5.610982	AGAGAGAGATAGAGAGGGAAAGCTA	59.389	44.000	0.00	0.00	0.00	3.32
163	164	5.880901	AGAGAGATAGAGAGGGAAAGCTAG	58.119	45.833	0.00	0.00	0.00	3.42
164	165	4.998051	AGAGATAGAGAGGGAAAGCTAGG	58.002	47.826	0.00	0.00	0.00	3.02
165	166	4.086457	GAGATAGAGAGGGAAAGCTAGGG	58.914	52.174	0.00	0.00	0.00	3.53
166	167	3.469389	AGATAGAGAGGGAAAGCTAGGGT	59.531	47.826	0.00	0.00	0.00	4.34
167	168	1.872773	AGAGAGGGAAAGCTAGGGTG	58.127	55.000	0.00	0.00	0.00	4.61
168	169	1.362932	AGAGAGGGAAAGCTAGGGTGA	59.637	52.381	0.00	0.00	0.00	4.02
169	170	1.760029	GAGAGGGAAAGCTAGGGTGAG	59.240	57.143	0.00	0.00	0.00	3.51
170	171	1.362932	AGAGGGAAAGCTAGGGTGAGA	59.637	52.381	0.00	0.00	0.00	3.27
171	172	1.760029	GAGGGAAAGCTAGGGTGAGAG	59.240	57.143	0.00	0.00	0.00	3.20
172	173	0.833949	GGGAAAGCTAGGGTGAGAGG	59.166	60.000	0.00	0.00	0.00	3.69
173	174	0.179234	GGAAAGCTAGGGTGAGAGGC	59.821	60.000	0.00	0.00	0.00	4.70
174	175	0.179097	GAAAGCTAGGGTGAGAGGCG	60.179	60.000	0.00	0.00	0.00	5.52
175	176	0.905337	AAAGCTAGGGTGAGAGGCGT	60.905	55.000	0.00	0.00	0.00	5.68
176	177	1.608717	AAGCTAGGGTGAGAGGCGTG	61.609	60.000	0.00	0.00	0.00	5.34
177	178	3.082579	GCTAGGGTGAGAGGCGTGG	62.083	68.421	0.00	0.00	0.00	4.94
178	179	2.363795	TAGGGTGAGAGGCGTGGG	60.364	66.667	0.00	0.00	0.00	4.61
179	180	3.976490	TAGGGTGAGAGGCGTGGGG	62.976	68.421	0.00	0.00	0.00	4.96
199	200	2.026445	TGCTTGCAGCGCAACAAG	59.974	55.556	28.20	28.20	46.26	3.16
200	201	2.332514	GCTTGCAGCGCAACAAGA	59.667	55.556	33.46	9.56	43.99	3.02
201	202	1.299316	GCTTGCAGCGCAACAAGAA	60.299	52.632	33.46	8.94	43.99	2.52
202	203	1.273455	GCTTGCAGCGCAACAAGAAG	61.273	55.000	33.46	17.21	43.99	2.85
203	204	0.662374	CTTGCAGCGCAACAAGAAGG	60.662	55.000	28.47	9.87	43.99	3.46
204	205	1.100463	TTGCAGCGCAACAAGAAGGA	61.100	50.000	11.47	0.00	43.99	3.36
205	206	1.208614	GCAGCGCAACAAGAAGGAG	59.791	57.895	11.47	0.00	0.00	3.69
206	207	1.871772	CAGCGCAACAAGAAGGAGG	59.128	57.895	11.47	0.00	0.00	4.30
207	208	1.302832	AGCGCAACAAGAAGGAGGG	60.303	57.895	11.47	0.00	0.00	4.30
208	209	2.335712	GCGCAACAAGAAGGAGGGG	61.336	63.158	0.30	0.00	0.00	4.79
209	210	1.675641	CGCAACAAGAAGGAGGGGG	60.676	63.158	0.00	0.00	0.00	5.40
224	225	3.412408	GGGGAGGGGAGGTGCTTC	61.412	72.222	0.00	0.00	0.00	3.86
225	226	3.412408	GGGAGGGGAGGTGCTTCC	61.412	72.222	0.00	0.00	36.46	3.46
226	227	2.610859	GGAGGGGAGGTGCTTCCA	60.611	66.667	2.80	0.00	39.09	3.53
227	228	2.231380	GGAGGGGAGGTGCTTCCAA	61.231	63.158	2.80	0.00	39.09	3.53
228	229	1.002011	GAGGGGAGGTGCTTCCAAC	60.002	63.158	2.80	0.00	39.09	3.77
229	230	1.774217	AGGGGAGGTGCTTCCAACA	60.774	57.895	2.80	0.00	39.09	3.33
230	231	1.303643	GGGGAGGTGCTTCCAACAG	60.304	63.158	2.80	0.00	39.09	3.16
231	232	1.973812	GGGAGGTGCTTCCAACAGC	60.974	63.158	2.80	0.00	39.09	4.40
232	233	2.328099	GGAGGTGCTTCCAACAGCG	61.328	63.158	0.00	0.00	43.37	5.18
233	234	1.301716	GAGGTGCTTCCAACAGCGA	60.302	57.895	0.00	0.00	43.37	4.93
234	235	1.294659	GAGGTGCTTCCAACAGCGAG	61.295	60.000	0.00	0.00	43.37	5.03
235	236	1.301716	GGTGCTTCCAACAGCGAGA	60.302	57.895	0.00	0.00	43.37	4.04
236	237	0.674895	GGTGCTTCCAACAGCGAGAT	60.675	55.000	0.00	0.00	43.37	2.75
237	238	0.445436	GTGCTTCCAACAGCGAGATG	59.555	55.000	0.00	0.00	43.37	2.90
238	239	0.674581	TGCTTCCAACAGCGAGATGG	60.675	55.000	2.73	2.73	43.37	3.51
239	240	0.674895	GCTTCCAACAGCGAGATGGT	60.675	55.000	8.03	0.00	40.80	3.55
240	241	1.363744	CTTCCAACAGCGAGATGGTC	58.636	55.000	8.03	0.00	40.80	4.02
241	242	0.036388	TTCCAACAGCGAGATGGTCC	60.036	55.000	8.03	0.00	40.80	4.46
242	243	0.904865	TCCAACAGCGAGATGGTCCT	60.905	55.000	8.03	0.00	40.80	3.85
243	244	0.742281	CCAACAGCGAGATGGTCCTG	60.742	60.000	0.00	0.00	35.56	3.86
244	245	0.036952	CAACAGCGAGATGGTCCTGT	60.037	55.000	0.00	0.00	37.94	4.00
245	246	0.247736	AACAGCGAGATGGTCCTGTC	59.752	55.000	0.00	0.00	36.33	3.51
246	247	0.613292	ACAGCGAGATGGTCCTGTCT	60.613	55.000	0.00	0.00	33.72	3.41
247	248	1.341089	ACAGCGAGATGGTCCTGTCTA	60.341	52.381	0.00	0.00	33.72	2.59
248	249	1.066303	CAGCGAGATGGTCCTGTCTAC	59.934	57.143	0.00	0.00	0.00	2.59
249	250	1.103803	GCGAGATGGTCCTGTCTACA	58.896	55.000	0.00	0.00	0.00	2.74
250	251	1.066303	GCGAGATGGTCCTGTCTACAG	59.934	57.143	3.02	3.02	43.40	2.74
251	252	1.066303	CGAGATGGTCCTGTCTACAGC	59.934	57.143	4.53	0.00	42.47	4.40
252	253	2.103373	GAGATGGTCCTGTCTACAGCA	58.897	52.381	4.53	0.00	42.47	4.41
253	254	2.100584	GAGATGGTCCTGTCTACAGCAG	59.899	54.545	4.53	0.00	42.47	4.24
254	255	0.539051	ATGGTCCTGTCTACAGCAGC	59.461	55.000	4.53	0.30	42.47	5.25
255	256	1.153745	GGTCCTGTCTACAGCAGCG	60.154	63.158	4.53	0.00	42.47	5.18
256	257	1.153745	GTCCTGTCTACAGCAGCGG	60.154	63.158	4.53	0.00	42.47	5.52
257	258	1.304134	TCCTGTCTACAGCAGCGGA	60.304	57.895	0.00	0.00	42.47	5.54
258	259	1.153745	CCTGTCTACAGCAGCGGAC	60.154	63.158	0.00	1.98	42.47	4.79
259	260	1.586541	CTGTCTACAGCAGCGGACA	59.413	57.895	0.00	6.48	37.15	4.02
260	261	0.174389	CTGTCTACAGCAGCGGACAT	59.826	55.000	0.00	0.00	37.92	3.06
261	262	0.173481	TGTCTACAGCAGCGGACATC	59.827	55.000	0.00	0.00	34.38	3.06
262	263	0.528684	GTCTACAGCAGCGGACATCC	60.529	60.000	0.00	0.00	0.00	3.51
263	264	0.684479	TCTACAGCAGCGGACATCCT	60.684	55.000	0.00	0.00	0.00	3.24
264	265	0.529337	CTACAGCAGCGGACATCCTG	60.529	60.000	0.00	0.00	0.00	3.86
265	266	0.970427	TACAGCAGCGGACATCCTGA	60.970	55.000	0.00	0.00	0.00	3.86
266	267	1.145598	CAGCAGCGGACATCCTGAT	59.854	57.895	0.00	0.00	0.00	2.90
267	268	1.145598	AGCAGCGGACATCCTGATG	59.854	57.895	5.60	5.60	44.15	3.07
268	269	1.890979	GCAGCGGACATCCTGATGG	60.891	63.158	11.56	0.00	42.91	3.51
278	279	3.888424	TCCTGATGGATGCTGGTTG	57.112	52.632	0.00	0.00	37.46	3.77
279	280	0.994247	TCCTGATGGATGCTGGTTGT	59.006	50.000	0.00	0.00	37.46	3.32
280	281	1.100510	CCTGATGGATGCTGGTTGTG	58.899	55.000	0.00	0.00	34.57	3.33
281	282	1.615116	CCTGATGGATGCTGGTTGTGT	60.615	52.381	0.00	0.00	34.57	3.72
282	283	2.165167	CTGATGGATGCTGGTTGTGTT	58.835	47.619	0.00	0.00	0.00	3.32
283	284	2.559668	CTGATGGATGCTGGTTGTGTTT	59.440	45.455	0.00	0.00	0.00	2.83
284	285	2.296752	TGATGGATGCTGGTTGTGTTTG	59.703	45.455	0.00	0.00	0.00	2.93
285	286	1.774110	TGGATGCTGGTTGTGTTTGT	58.226	45.000	0.00	0.00	0.00	2.83
286	287	1.408340	TGGATGCTGGTTGTGTTTGTG	59.592	47.619	0.00	0.00	0.00	3.33
287	288	1.490621	GATGCTGGTTGTGTTTGTGC	58.509	50.000	0.00	0.00	0.00	4.57
288	289	0.248990	ATGCTGGTTGTGTTTGTGCG	60.249	50.000	0.00	0.00	0.00	5.34
289	290	1.138671	GCTGGTTGTGTTTGTGCGT	59.861	52.632	0.00	0.00	0.00	5.24
290	291	1.139226	GCTGGTTGTGTTTGTGCGTG	61.139	55.000	0.00	0.00	0.00	5.34
291	292	0.170116	CTGGTTGTGTTTGTGCGTGT	59.830	50.000	0.00	0.00	0.00	4.49
292	293	0.109551	TGGTTGTGTTTGTGCGTGTG	60.110	50.000	0.00	0.00	0.00	3.82
293	294	0.169230	GGTTGTGTTTGTGCGTGTGA	59.831	50.000	0.00	0.00	0.00	3.58
294	295	1.534028	GTTGTGTTTGTGCGTGTGAG	58.466	50.000	0.00	0.00	0.00	3.51
295	296	1.129624	GTTGTGTTTGTGCGTGTGAGA	59.870	47.619	0.00	0.00	0.00	3.27
296	297	1.006086	TGTGTTTGTGCGTGTGAGAG	58.994	50.000	0.00	0.00	0.00	3.20
297	298	0.304705	GTGTTTGTGCGTGTGAGAGG	59.695	55.000	0.00	0.00	0.00	3.69
298	299	0.813610	TGTTTGTGCGTGTGAGAGGG	60.814	55.000	0.00	0.00	0.00	4.30
299	300	0.531974	GTTTGTGCGTGTGAGAGGGA	60.532	55.000	0.00	0.00	0.00	4.20
300	301	0.396435	TTTGTGCGTGTGAGAGGGAT	59.604	50.000	0.00	0.00	0.00	3.85
301	302	0.320683	TTGTGCGTGTGAGAGGGATG	60.321	55.000	0.00	0.00	0.00	3.51
302	303	1.184970	TGTGCGTGTGAGAGGGATGA	61.185	55.000	0.00	0.00	0.00	2.92
303	304	0.459237	GTGCGTGTGAGAGGGATGAG	60.459	60.000	0.00	0.00	0.00	2.90
304	305	1.520342	GCGTGTGAGAGGGATGAGC	60.520	63.158	0.00	0.00	0.00	4.26
305	306	1.226802	CGTGTGAGAGGGATGAGCG	60.227	63.158	0.00	0.00	0.00	5.03
306	307	1.142748	GTGTGAGAGGGATGAGCGG	59.857	63.158	0.00	0.00	0.00	5.52
307	308	1.305297	TGTGAGAGGGATGAGCGGT	60.305	57.895	0.00	0.00	0.00	5.68
308	309	0.033503	TGTGAGAGGGATGAGCGGTA	60.034	55.000	0.00	0.00	0.00	4.02
309	310	1.333177	GTGAGAGGGATGAGCGGTAT	58.667	55.000	0.00	0.00	0.00	2.73
310	311	1.000283	GTGAGAGGGATGAGCGGTATG	60.000	57.143	0.00	0.00	0.00	2.39
311	312	0.605589	GAGAGGGATGAGCGGTATGG	59.394	60.000	0.00	0.00	0.00	2.74
312	313	0.188587	AGAGGGATGAGCGGTATGGA	59.811	55.000	0.00	0.00	0.00	3.41
313	314	1.048601	GAGGGATGAGCGGTATGGAA	58.951	55.000	0.00	0.00	0.00	3.53
314	315	1.416401	GAGGGATGAGCGGTATGGAAA	59.584	52.381	0.00	0.00	0.00	3.13
315	316	1.417890	AGGGATGAGCGGTATGGAAAG	59.582	52.381	0.00	0.00	0.00	2.62
316	317	1.416401	GGGATGAGCGGTATGGAAAGA	59.584	52.381	0.00	0.00	0.00	2.52
317	318	2.548920	GGGATGAGCGGTATGGAAAGAG	60.549	54.545	0.00	0.00	0.00	2.85
318	319	2.139118	GATGAGCGGTATGGAAAGAGC	58.861	52.381	0.00	0.00	0.00	4.09
319	320	0.179111	TGAGCGGTATGGAAAGAGCG	60.179	55.000	0.00	0.00	39.48	5.03
320	321	0.179108	GAGCGGTATGGAAAGAGCGT	60.179	55.000	0.00	0.00	38.75	5.07
321	322	0.249398	AGCGGTATGGAAAGAGCGTT	59.751	50.000	0.00	0.00	38.75	4.84
322	323	0.651031	GCGGTATGGAAAGAGCGTTC	59.349	55.000	0.00	0.00	38.75	3.95
323	324	1.739371	GCGGTATGGAAAGAGCGTTCT	60.739	52.381	0.00	0.00	38.75	3.01
324	325	1.927174	CGGTATGGAAAGAGCGTTCTG	59.073	52.381	1.31	0.00	32.79	3.02
325	326	2.280628	GGTATGGAAAGAGCGTTCTGG	58.719	52.381	1.31	0.00	32.79	3.86
326	327	2.093658	GGTATGGAAAGAGCGTTCTGGA	60.094	50.000	1.31	0.00	32.79	3.86
327	328	2.393271	ATGGAAAGAGCGTTCTGGAG	57.607	50.000	1.31	0.00	32.79	3.86
328	329	1.338107	TGGAAAGAGCGTTCTGGAGA	58.662	50.000	1.31	0.00	32.79	3.71
329	330	1.691976	TGGAAAGAGCGTTCTGGAGAA	59.308	47.619	1.31	0.00	32.79	2.87
330	331	2.289072	TGGAAAGAGCGTTCTGGAGAAG	60.289	50.000	1.31	0.00	34.27	2.85
331	332	2.028930	GGAAAGAGCGTTCTGGAGAAGA	60.029	50.000	1.31	0.00	34.27	2.87
332	333	2.734276	AAGAGCGTTCTGGAGAAGAC	57.266	50.000	1.31	0.00	33.46	3.01
333	334	0.523966	AGAGCGTTCTGGAGAAGACG	59.476	55.000	0.00	0.00	33.46	4.18
334	335	0.241481	GAGCGTTCTGGAGAAGACGT	59.759	55.000	0.00	0.00	33.46	4.34
335	336	0.039074	AGCGTTCTGGAGAAGACGTG	60.039	55.000	0.00	0.00	33.46	4.49
336	337	0.039437	GCGTTCTGGAGAAGACGTGA	60.039	55.000	0.00	0.00	33.46	4.35
337	338	1.687628	CGTTCTGGAGAAGACGTGAC	58.312	55.000	0.00	0.00	33.46	3.67
338	339	1.687628	GTTCTGGAGAAGACGTGACG	58.312	55.000	2.24	2.24	33.46	4.35
339	340	0.596577	TTCTGGAGAAGACGTGACGG	59.403	55.000	10.66	0.00	33.46	4.79
340	341	0.250597	TCTGGAGAAGACGTGACGGA	60.251	55.000	10.66	0.00	0.00	4.69
341	342	0.109689	CTGGAGAAGACGTGACGGAC	60.110	60.000	10.66	2.90	0.00	4.79
342	343	0.536687	TGGAGAAGACGTGACGGACT	60.537	55.000	10.66	5.49	0.00	3.85
343	344	0.109689	GGAGAAGACGTGACGGACTG	60.110	60.000	10.66	0.00	0.00	3.51
344	345	0.873054	GAGAAGACGTGACGGACTGA	59.127	55.000	10.66	0.00	0.00	3.41
345	346	0.592148	AGAAGACGTGACGGACTGAC	59.408	55.000	10.66	6.82	0.00	3.51
346	347	0.725118	GAAGACGTGACGGACTGACG	60.725	60.000	10.66	0.00	39.03	4.35
347	348	2.126417	AAGACGTGACGGACTGACGG	62.126	60.000	10.66	0.00	37.42	4.79
348	349	2.901292	GACGTGACGGACTGACGGT	61.901	63.158	10.66	0.00	37.42	4.83
349	350	2.333938	CGTGACGGACTGACGGTT	59.666	61.111	0.00	0.00	38.39	4.44
350	351	1.299620	CGTGACGGACTGACGGTTT	60.300	57.895	0.00	0.00	38.39	3.27
351	352	1.545614	CGTGACGGACTGACGGTTTG	61.546	60.000	0.00	0.00	38.39	2.93
352	353	0.249155	GTGACGGACTGACGGTTTGA	60.249	55.000	0.00	0.00	38.39	2.69
353	354	0.677288	TGACGGACTGACGGTTTGAT	59.323	50.000	0.00	0.00	38.39	2.57
354	355	1.069513	TGACGGACTGACGGTTTGATT	59.930	47.619	0.00	0.00	38.39	2.57
355	356	1.725164	GACGGACTGACGGTTTGATTC	59.275	52.381	0.00	0.00	38.39	2.52
356	357	1.343465	ACGGACTGACGGTTTGATTCT	59.657	47.619	0.00	0.00	38.39	2.40
357	358	2.559668	ACGGACTGACGGTTTGATTCTA	59.440	45.455	0.00	0.00	38.39	2.10
358	359	3.179830	CGGACTGACGGTTTGATTCTAG	58.820	50.000	0.00	0.00	0.00	2.43
359	360	3.367087	CGGACTGACGGTTTGATTCTAGT	60.367	47.826	0.00	0.00	0.00	2.57
360	361	4.142534	CGGACTGACGGTTTGATTCTAGTA	60.143	45.833	0.00	0.00	0.00	1.82
361	362	5.100943	GGACTGACGGTTTGATTCTAGTAC	58.899	45.833	0.00	0.00	0.00	2.73
362	363	4.730657	ACTGACGGTTTGATTCTAGTACG	58.269	43.478	0.00	0.00	0.00	3.67
363	364	4.217118	ACTGACGGTTTGATTCTAGTACGT	59.783	41.667	0.00	0.00	35.89	3.57
364	365	5.412594	ACTGACGGTTTGATTCTAGTACGTA	59.587	40.000	0.00	0.00	33.09	3.57
365	366	5.631026	TGACGGTTTGATTCTAGTACGTAC	58.369	41.667	18.10	18.10	33.09	3.67
366	367	4.651994	ACGGTTTGATTCTAGTACGTACG	58.348	43.478	19.49	15.01	0.00	3.67
367	368	4.391830	ACGGTTTGATTCTAGTACGTACGA	59.608	41.667	24.41	13.92	0.00	3.43
368	369	5.065218	ACGGTTTGATTCTAGTACGTACGAT	59.935	40.000	24.41	12.22	0.00	3.73
369	370	5.618798	CGGTTTGATTCTAGTACGTACGATC	59.381	44.000	24.41	19.04	0.00	3.69
370	371	6.489675	GGTTTGATTCTAGTACGTACGATCA	58.510	40.000	24.41	20.94	0.00	2.92
371	372	6.413235	GGTTTGATTCTAGTACGTACGATCAC	59.587	42.308	24.41	15.77	0.00	3.06
373	374	4.209911	TGATTCTAGTACGTACGATCACGG	59.790	45.833	24.41	13.53	46.12	4.94
374	375	3.436700	TCTAGTACGTACGATCACGGA	57.563	47.619	24.41	15.28	46.12	4.69
389	390	3.236604	CGGACACGTAAAATGGGGT	57.763	52.632	0.00	0.00	34.81	4.95
390	391	1.081094	CGGACACGTAAAATGGGGTC	58.919	55.000	0.00	0.00	34.81	4.46
391	392	1.608542	CGGACACGTAAAATGGGGTCA	60.609	52.381	0.00	0.00	34.81	4.02
392	393	2.506444	GGACACGTAAAATGGGGTCAA	58.494	47.619	0.00	0.00	0.00	3.18
393	394	2.486592	GGACACGTAAAATGGGGTCAAG	59.513	50.000	0.00	0.00	0.00	3.02
394	395	3.404899	GACACGTAAAATGGGGTCAAGA	58.595	45.455	0.00	0.00	0.00	3.02
395	396	3.816523	GACACGTAAAATGGGGTCAAGAA	59.183	43.478	0.00	0.00	0.00	2.52
396	397	3.818773	ACACGTAAAATGGGGTCAAGAAG	59.181	43.478	0.00	0.00	0.00	2.85
397	398	3.190535	CACGTAAAATGGGGTCAAGAAGG	59.809	47.826	0.00	0.00	0.00	3.46
398	399	2.163613	CGTAAAATGGGGTCAAGAAGGC	59.836	50.000	0.00	0.00	0.00	4.35
399	400	2.397044	AAAATGGGGTCAAGAAGGCA	57.603	45.000	0.00	0.00	0.00	4.75
400	401	1.632589	AAATGGGGTCAAGAAGGCAC	58.367	50.000	0.00	0.00	0.00	5.01
401	402	0.482446	AATGGGGTCAAGAAGGCACA	59.518	50.000	0.00	0.00	0.00	4.57
402	403	0.706433	ATGGGGTCAAGAAGGCACAT	59.294	50.000	0.00	0.00	0.00	3.21
403	404	0.251297	TGGGGTCAAGAAGGCACATG	60.251	55.000	0.00	0.00	0.00	3.21
404	405	0.251341	GGGGTCAAGAAGGCACATGT	60.251	55.000	0.00	0.00	0.00	3.21
405	406	1.168714	GGGTCAAGAAGGCACATGTC	58.831	55.000	0.00	0.00	0.00	3.06
406	407	1.545428	GGGTCAAGAAGGCACATGTCA	60.545	52.381	0.00	0.00	0.00	3.58
407	408	2.229792	GGTCAAGAAGGCACATGTCAA	58.770	47.619	0.00	0.00	0.00	3.18
408	409	2.821969	GGTCAAGAAGGCACATGTCAAT	59.178	45.455	0.00	0.00	0.00	2.57
409	410	3.119708	GGTCAAGAAGGCACATGTCAATC	60.120	47.826	0.00	0.00	0.00	2.67
410	411	2.743664	TCAAGAAGGCACATGTCAATCG	59.256	45.455	0.00	0.00	0.00	3.34
411	412	1.742761	AGAAGGCACATGTCAATCGG	58.257	50.000	0.00	0.00	0.00	4.18
412	413	1.278985	AGAAGGCACATGTCAATCGGA	59.721	47.619	0.00	0.00	0.00	4.55
413	414	1.667724	GAAGGCACATGTCAATCGGAG	59.332	52.381	0.00	0.00	0.00	4.63
414	415	0.745845	AGGCACATGTCAATCGGAGC	60.746	55.000	0.00	0.00	0.00	4.70
415	416	1.718757	GGCACATGTCAATCGGAGCC	61.719	60.000	0.00	0.00	0.00	4.70
416	417	2.009108	CACATGTCAATCGGAGCCG	58.991	57.895	1.74	1.74	41.35	5.52
417	418	1.815421	ACATGTCAATCGGAGCCGC	60.815	57.895	3.59	0.00	39.59	6.53
418	419	2.203070	ATGTCAATCGGAGCCGCC	60.203	61.111	3.59	0.00	39.59	6.13
435	436	2.881827	CGGCGGACGCGAATGTTA	60.882	61.111	15.93	0.00	43.06	2.41
436	437	2.446253	CGGCGGACGCGAATGTTAA	61.446	57.895	15.93	0.00	43.06	2.01
437	438	1.789116	GGCGGACGCGAATGTTAAA	59.211	52.632	15.93	0.00	43.06	1.52
438	439	0.375803	GGCGGACGCGAATGTTAAAT	59.624	50.000	15.93	0.00	43.06	1.40
439	440	1.593793	GGCGGACGCGAATGTTAAATC	60.594	52.381	15.93	0.00	43.06	2.17
440	441	1.593793	GCGGACGCGAATGTTAAATCC	60.594	52.381	15.93	4.57	0.00	3.01
441	442	1.331680	CGGACGCGAATGTTAAATCCG	60.332	52.381	15.93	14.33	41.37	4.18
442	443	1.593793	GGACGCGAATGTTAAATCCGC	60.594	52.381	15.93	0.00	42.11	5.54
443	444	0.375803	ACGCGAATGTTAAATCCGCC	59.624	50.000	15.93	0.00	42.50	6.13
444	445	0.375454	CGCGAATGTTAAATCCGCCA	59.625	50.000	0.00	0.00	42.50	5.69
445	446	1.594518	CGCGAATGTTAAATCCGCCAG	60.595	52.381	0.00	0.00	42.50	4.85
446	447	1.400494	GCGAATGTTAAATCCGCCAGT	59.600	47.619	0.00	0.00	39.97	4.00
447	448	2.159435	GCGAATGTTAAATCCGCCAGTT	60.159	45.455	0.00	0.00	39.97	3.16
448	449	3.425404	CGAATGTTAAATCCGCCAGTTG	58.575	45.455	0.00	0.00	0.00	3.16
449	450	3.126171	CGAATGTTAAATCCGCCAGTTGA	59.874	43.478	0.00	0.00	0.00	3.18
450	451	4.412207	GAATGTTAAATCCGCCAGTTGAC	58.588	43.478	0.00	0.00	0.00	3.18
451	452	1.801771	TGTTAAATCCGCCAGTTGACG	59.198	47.619	0.00	0.00	0.00	4.35
452	453	1.802365	GTTAAATCCGCCAGTTGACGT	59.198	47.619	0.00	0.00	0.00	4.34
453	454	1.434555	TAAATCCGCCAGTTGACGTG	58.565	50.000	0.00	0.00	0.00	4.49
454	455	0.250124	AAATCCGCCAGTTGACGTGA	60.250	50.000	0.00	0.00	0.00	4.35
455	456	0.250124	AATCCGCCAGTTGACGTGAA	60.250	50.000	0.00	0.00	0.00	3.18
456	457	0.670546	ATCCGCCAGTTGACGTGAAG	60.671	55.000	0.00	0.00	0.00	3.02
457	458	1.300620	CCGCCAGTTGACGTGAAGA	60.301	57.895	0.00	0.00	0.00	2.87
458	459	1.284982	CCGCCAGTTGACGTGAAGAG	61.285	60.000	0.00	0.00	0.00	2.85
459	460	0.597637	CGCCAGTTGACGTGAAGAGT	60.598	55.000	0.00	0.00	0.00	3.24
460	461	1.583054	GCCAGTTGACGTGAAGAGTT	58.417	50.000	0.00	0.00	0.00	3.01
461	462	1.940613	GCCAGTTGACGTGAAGAGTTT	59.059	47.619	0.00	0.00	0.00	2.66
462	463	2.354821	GCCAGTTGACGTGAAGAGTTTT	59.645	45.455	0.00	0.00	0.00	2.43
463	464	3.546218	GCCAGTTGACGTGAAGAGTTTTC	60.546	47.826	0.00	0.00	0.00	2.29
464	465	3.002348	CCAGTTGACGTGAAGAGTTTTCC	59.998	47.826	0.00	0.00	0.00	3.13
465	466	3.871594	CAGTTGACGTGAAGAGTTTTCCT	59.128	43.478	0.00	0.00	0.00	3.36
466	467	4.332819	CAGTTGACGTGAAGAGTTTTCCTT	59.667	41.667	0.00	0.00	0.00	3.36
467	468	5.522460	CAGTTGACGTGAAGAGTTTTCCTTA	59.478	40.000	0.00	0.00	0.00	2.69
468	469	6.202954	CAGTTGACGTGAAGAGTTTTCCTTAT	59.797	38.462	0.00	0.00	0.00	1.73
469	470	6.202954	AGTTGACGTGAAGAGTTTTCCTTATG	59.797	38.462	0.00	0.00	0.00	1.90
470	471	5.849510	TGACGTGAAGAGTTTTCCTTATGA	58.150	37.500	0.00	0.00	0.00	2.15
471	472	6.464222	TGACGTGAAGAGTTTTCCTTATGAT	58.536	36.000	0.00	0.00	0.00	2.45
472	473	7.608153	TGACGTGAAGAGTTTTCCTTATGATA	58.392	34.615	0.00	0.00	0.00	2.15
473	474	8.092068	TGACGTGAAGAGTTTTCCTTATGATAA	58.908	33.333	0.00	0.00	0.00	1.75
474	475	8.842358	ACGTGAAGAGTTTTCCTTATGATAAA	57.158	30.769	0.00	0.00	0.00	1.40
475	476	9.280174	ACGTGAAGAGTTTTCCTTATGATAAAA	57.720	29.630	0.00	0.00	0.00	1.52
476	477	9.543018	CGTGAAGAGTTTTCCTTATGATAAAAC	57.457	33.333	0.00	0.00	41.31	2.43
504	505	4.828072	AGAAATATAAGATCTCCCCCGC	57.172	45.455	0.00	0.00	0.00	6.13
505	506	4.168101	AGAAATATAAGATCTCCCCCGCA	58.832	43.478	0.00	0.00	0.00	5.69
506	507	4.597507	AGAAATATAAGATCTCCCCCGCAA	59.402	41.667	0.00	0.00	0.00	4.85
507	508	4.993705	AATATAAGATCTCCCCCGCAAA	57.006	40.909	0.00	0.00	0.00	3.68
508	509	4.993705	ATATAAGATCTCCCCCGCAAAA	57.006	40.909	0.00	0.00	0.00	2.44
509	510	3.662759	ATAAGATCTCCCCCGCAAAAA	57.337	42.857	0.00	0.00	0.00	1.94
545	546	7.622893	AAGATCTTTTAGACTTGCCTGAATC	57.377	36.000	0.88	0.00	0.00	2.52
546	547	6.956497	AGATCTTTTAGACTTGCCTGAATCT	58.044	36.000	0.00	0.00	0.00	2.40
547	548	7.401246	AGATCTTTTAGACTTGCCTGAATCTT	58.599	34.615	0.00	0.00	0.00	2.40
548	549	8.543774	AGATCTTTTAGACTTGCCTGAATCTTA	58.456	33.333	0.00	0.00	0.00	2.10
549	550	9.336171	GATCTTTTAGACTTGCCTGAATCTTAT	57.664	33.333	0.00	0.00	0.00	1.73
563	564	9.509855	GCCTGAATCTTATATAAGTACTGATCG	57.490	37.037	19.58	5.88	34.93	3.69
698	706	1.127567	CCTCCCTCACTCACCCACAA	61.128	60.000	0.00	0.00	0.00	3.33
699	707	0.035458	CTCCCTCACTCACCCACAAC	59.965	60.000	0.00	0.00	0.00	3.32
722	730	1.515736	GACGGCGTTAACGGAGGAG	60.516	63.158	27.82	0.81	40.23	3.69
753	761	4.201763	GGCGACATCAAAGCAAAACAAAAA	60.202	37.500	0.00	0.00	0.00	1.94
1064	1081	3.093278	GGCTGAACTCCGATTGCG	58.907	61.111	0.00	0.00	37.24	4.85
1127	1144	2.804167	CGAGCGTGCTCTCCAGAT	59.196	61.111	18.79	0.00	40.69	2.90
1220	1237	2.288525	AGCTGATTACCTTTTCCCCCT	58.711	47.619	0.00	0.00	0.00	4.79
1221	1238	3.470868	AGCTGATTACCTTTTCCCCCTA	58.529	45.455	0.00	0.00	0.00	3.53
1222	1239	3.459969	AGCTGATTACCTTTTCCCCCTAG	59.540	47.826	0.00	0.00	0.00	3.02
1225	1243	5.073280	GCTGATTACCTTTTCCCCCTAGTAT	59.927	44.000	0.00	0.00	0.00	2.12
1229	1247	9.071334	TGATTACCTTTTCCCCCTAGTATTTTA	57.929	33.333	0.00	0.00	0.00	1.52
1269	1288	5.586339	GAGAATAGGAGCTCAAATTTTGGC	58.414	41.667	17.19	10.86	0.00	4.52
1327	1348	0.875059	GCTATATGCAACCCGGCTTC	59.125	55.000	0.00	0.00	42.31	3.86
1328	1349	1.543429	GCTATATGCAACCCGGCTTCT	60.543	52.381	0.00	0.00	42.31	2.85
1379	1400	4.701956	ATAGGTGCTCGAATTTTGGTTG	57.298	40.909	0.00	0.00	0.00	3.77
1391	1412	5.516339	CGAATTTTGGTTGGTGAGATTATGC	59.484	40.000	0.00	0.00	0.00	3.14
1434	1455	5.255687	TCAATTATGTGCTGTGGAGTTGAT	58.744	37.500	0.00	0.00	0.00	2.57
1560	1583	0.100682	TTCGCTATGCCGTCAGAGTC	59.899	55.000	0.00	0.00	34.19	3.36
1562	1585	1.816537	GCTATGCCGTCAGAGTCCA	59.183	57.895	0.00	0.00	34.19	4.02
1564	1587	1.405526	GCTATGCCGTCAGAGTCCAAA	60.406	52.381	0.00	0.00	34.19	3.28
1591	1619	6.528014	TTTATTACTTTTTGTCGCGTCTCA	57.472	33.333	5.77	1.28	0.00	3.27
1617	1645	1.362224	TTTCTCAAGGGACCCTCTGG	58.638	55.000	15.27	7.00	30.89	3.86
1625	1653	0.621862	GGGACCCTCTGGAATGTCCT	60.622	60.000	2.09	0.00	45.29	3.85
1651	1679	6.741992	TTCATCTGTTGTTGATCATGTACC	57.258	37.500	0.00	0.00	0.00	3.34
1717	1745	2.496899	AAACCTGTGTAGATGCTGGG	57.503	50.000	0.00	0.00	0.00	4.45
1773	1801	2.663196	GGAGTACGGCTTGCCACT	59.337	61.111	12.45	8.30	0.00	4.00
1798	1826	2.382882	TCATCTGATGAAGAGCTCCGT	58.617	47.619	17.56	0.00	38.67	4.69
1889	1917	1.602311	CCTGCTGTGCTTCTGAAACT	58.398	50.000	0.00	0.00	0.00	2.66
1917	1945	0.458543	TCGTGAGCTGCGGAGATTTC	60.459	55.000	8.65	2.19	0.00	2.17
1924	1952	0.848942	CTGCGGAGATTTCGATGTCG	59.151	55.000	0.00	0.00	41.45	4.35
1952	1980	7.437862	TGTTTTGATTATGGCTGTTCTTTGTTC	59.562	33.333	0.00	0.00	0.00	3.18
2055	2083	0.322277	CTGCCAGGCTTCAGTGTGAT	60.322	55.000	14.15	0.00	0.00	3.06
2488	2516	1.382522	CTGCCTTCAATGGTACGCAT	58.617	50.000	0.00	0.00	0.00	4.73
2554	2582	5.710409	AGTCTCTAGAGAGTTAGCCTTCT	57.290	43.478	22.95	9.98	42.60	2.85
2594	2623	1.493022	TGGTTTAGTTGCCACCTGACT	59.507	47.619	0.00	0.00	0.00	3.41
2600	2629	6.346096	GTTTAGTTGCCACCTGACTATCATA	58.654	40.000	0.00	0.00	0.00	2.15
2612	2641	8.088365	CACCTGACTATCATATTGTCGGATTAA	58.912	37.037	10.59	0.00	41.79	1.40
2726	2755	1.463674	CGGGGCTTTAACATGCTTCT	58.536	50.000	0.00	0.00	0.00	2.85
2903	2932	6.623767	GCTTCGTGAGATTTTCCAGCTAAAAT	60.624	38.462	6.86	6.86	40.79	1.82
2906	2935	5.619757	CGTGAGATTTTCCAGCTAAAATGCA	60.620	40.000	11.11	7.14	38.77	3.96
3058	3089	6.909357	GCAAGTTATATTCTCACAGAATGCAC	59.091	38.462	8.71	3.58	44.14	4.57
3366	3400	2.315925	TGAATCAGACGATCCCTTGC	57.684	50.000	0.00	0.00	0.00	4.01
3421	3455	8.421784	AGGGAAGAAAAGTACCTTTCAAAAATC	58.578	33.333	17.16	8.24	37.70	2.17
3553	3588	9.503427	GCTGATATTATGTACTTTTTGTTGACC	57.497	33.333	0.00	0.00	0.00	4.02
3899	4059	3.286353	TCAGTGAGCAAAATGTTGTCCA	58.714	40.909	0.00	0.00	37.06	4.02
3960	4120	6.488715	AGCAAGTCTTAAGGAAGAAATGGAT	58.511	36.000	1.85	0.00	43.38	3.41
3970	4130	5.198965	AGGAAGAAATGGATGTGATGGAAG	58.801	41.667	0.00	0.00	0.00	3.46
3986	4146	1.943340	GGAAGAAAGGAATAGGCTGCG	59.057	52.381	0.00	0.00	0.00	5.18
4003	4163	4.286910	GCTGCGTGAGAAAAATGTTGTTA	58.713	39.130	0.00	0.00	0.00	2.41
4048	4208	7.598118	AGAGTGATAAGAACATGATATCAAGCG	59.402	37.037	9.99	4.15	37.68	4.68
4107	4267	2.414825	GCAAAATGTTGGCCGGTTAATG	59.585	45.455	1.90	0.00	35.10	1.90
4143	4303	3.216800	TGGCCAGAACATGATATCAAGC	58.783	45.455	9.99	4.50	0.00	4.01
4159	4319	8.274322	TGATATCAAGCCTTAAGGAAGAAATGA	58.726	33.333	26.21	17.02	37.39	2.57
4174	4334	8.473219	AGGAAGAAATGAAAGAAATGAATAGGC	58.527	33.333	0.00	0.00	0.00	3.93
4179	4339	5.314923	TGAAAGAAATGAATAGGCTGCAC	57.685	39.130	0.50	0.00	0.00	4.57
4182	4342	3.201290	AGAAATGAATAGGCTGCACGAG	58.799	45.455	0.50	0.00	0.00	4.18
4227	4387	4.328118	AGAAAAAGAGGATGGCCAGAAT	57.672	40.909	13.05	0.00	36.29	2.40
4276	4436	7.928103	ACTAGAAGAAATGAATAAGCTGCATG	58.072	34.615	1.02	0.00	0.00	4.06
4292	4452	2.713011	GCATGAGCAACAGCTTAATCG	58.287	47.619	0.00	0.00	39.10	3.34
4327	4487	5.351458	AGACAAAGCAAATGGAAGAACAAC	58.649	37.500	0.00	0.00	0.00	3.32
4367	4527	8.621532	AAAGAATTTGAGCTTCATGTACTACA	57.378	30.769	0.00	0.00	36.60	2.74
4401	4561	5.986501	AAATCGAAGAGGTTGAGACTACT	57.013	39.130	0.00	0.00	43.63	2.57
4539	4699	5.529060	TCCTTTTCTTTTCTCACTCTTCTGC	59.471	40.000	0.00	0.00	0.00	4.26
4629	4789	8.413309	TTCAAATGAAGTGGAGAGATGAAATT	57.587	30.769	0.00	0.00	0.00	1.82
4662	4822	4.447389	GGTACGCTTTGTTGCATTGATTTT	59.553	37.500	0.00	0.00	0.00	1.82
4702	4862	6.414694	GTGCGGTCACAATTATGTTTGATATG	59.585	38.462	0.00	0.00	42.66	1.78
4703	4863	6.094742	TGCGGTCACAATTATGTTTGATATGT	59.905	34.615	0.00	0.00	37.82	2.29
4704	4864	6.632834	GCGGTCACAATTATGTTTGATATGTC	59.367	38.462	0.00	0.00	37.82	3.06
4737	4897	2.529780	TTTGTGCAGGCTCCAATTTG	57.470	45.000	0.00	0.00	0.00	2.32
4844	5004	5.969423	AGGTGTTCCATTGCTCAAATATTG	58.031	37.500	0.00	0.00	35.89	1.90
4852	5012	7.440198	TCCATTGCTCAAATATTGTTTCAACA	58.560	30.769	0.00	0.00	37.08	3.33
4946	5107	3.683340	GTCGTGTAAGACCATTTCTTCCC	59.317	47.826	0.00	0.00	44.02	3.97
4949	5110	2.640826	TGTAAGACCATTTCTTCCCGGT	59.359	45.455	0.00	0.00	44.02	5.28
4997	5160	0.951558	ACATTGGTGAAAGTGGCGAC	59.048	50.000	0.00	0.00	0.00	5.19
5091	5278	4.018960	ACTCATTTGCTTCTCAGGGTACAT	60.019	41.667	0.00	0.00	0.00	2.29
5309	5527	3.275617	TGTTGTGCTGTTCTGGTAGTT	57.724	42.857	0.00	0.00	0.00	2.24
5315	5533	4.461081	TGTGCTGTTCTGGTAGTTTTGTTT	59.539	37.500	0.00	0.00	0.00	2.83
5727	5955	2.301870	TGGACTCGTTTTACCTGATGCT	59.698	45.455	0.00	0.00	0.00	3.79
5835	6063	0.326264	ATGAAAGAAGCAGCCGGTCT	59.674	50.000	1.90	0.00	0.00	3.85
5990	6279	4.565236	GGATCCATTTCTAGAGGATGCCTG	60.565	50.000	14.97	2.91	42.41	4.85
6241	6534	8.908786	TTGGAGGCTTTATGTGATCTTTATAG	57.091	34.615	0.00	0.00	0.00	1.31
6269	6562	6.545504	TTCTTCAAATATTCTATCGCAGGC	57.454	37.500	0.00	0.00	0.00	4.85
6287	6580	0.235926	GCGGACAAGCAAAGACACTC	59.764	55.000	0.00	0.00	37.05	3.51
6920	8140	8.882415	TTCTTGGGTTAACTAGATAAATAGCG	57.118	34.615	5.42	0.00	0.00	4.26
7001	8631	7.390996	TGCCACTGCAATTTTTGAATCAATTAT	59.609	29.630	0.00	0.00	46.66	1.28
7399	11638	6.095377	GCTGATCACATTAAACCAAAAGAGG	58.905	40.000	0.00	0.00	0.00	3.69
7689	11944	6.299805	TGACTATGCATCAGGAGTAACTTT	57.700	37.500	0.19	0.00	0.00	2.66
7783	12039	6.572509	GCTCGATAATTTCAGGCATAGAGGTA	60.573	42.308	0.00	0.00	0.00	3.08
7788	12044	5.894298	ATTTCAGGCATAGAGGTACATCA	57.106	39.130	10.58	0.00	0.00	3.07
7803	12059	3.018598	ACATCACGAATAGCCAGATCG	57.981	47.619	0.00	0.00	42.05	3.69
7883	12139	7.173390	AGTTTTGAAGACTCCAAGTAAGCATAC	59.827	37.037	0.00	0.00	0.00	2.39
7889	12145	5.047235	AGACTCCAAGTAAGCATACGACTTT	60.047	40.000	0.00	0.00	37.11	2.66
7942	12201	5.691754	GCTCAATAAACTTTCACAACTTGGG	59.308	40.000	0.00	0.00	0.00	4.12
7955	12214	7.353414	TCACAACTTGGGAAATTTCATGTTA	57.647	32.000	19.49	4.11	32.46	2.41
7994	12258	7.432148	TGTTTATCTAGGCCTGAAAGTATCA	57.568	36.000	17.99	3.13	36.38	2.15
8015	12280	7.721286	ATCATAGATTTTCAAACTAGAGCCG	57.279	36.000	0.00	0.00	0.00	5.52
8024	12289	7.823149	TTTCAAACTAGAGCCGATAGTTAAC	57.177	36.000	0.00	0.00	41.47	2.01
8029	12294	6.770746	ACTAGAGCCGATAGTTAACTTTCA	57.229	37.500	21.22	3.30	29.01	2.69
8030	12295	7.166691	ACTAGAGCCGATAGTTAACTTTCAA	57.833	36.000	21.22	2.96	29.01	2.69
8146	12431	2.465813	AGATGGCAGAAGTAGAGCACT	58.534	47.619	0.00	0.00	40.05	4.40
8280	12613	5.030874	GTGAAACAAAGTTATGACGAGGG	57.969	43.478	0.00	0.00	36.32	4.30
8334	12668	7.627939	GCTCATAGCTTTGATGACAATTGACTT	60.628	37.037	13.59	4.04	38.45	3.01
8336	12670	7.391275	TCATAGCTTTGATGACAATTGACTTGA	59.609	33.333	13.59	0.00	38.29	3.02
8337	12671	6.010294	AGCTTTGATGACAATTGACTTGAG	57.990	37.500	13.59	3.84	38.29	3.02
8391	12725	1.080638	TATTGTGGCCTCTTGGGGTT	58.919	50.000	3.32	0.00	35.12	4.11
8394	12728	4.344865	TGGCCTCTTGGGGTTCGC	62.345	66.667	3.32	0.00	35.12	4.70
8397	12731	4.016706	CCTCTTGGGGTTCGCCGT	62.017	66.667	1.70	0.00	38.45	5.68
8402	12736	1.170442	CTTGGGGTTCGCCGTTTATT	58.830	50.000	1.70	0.00	38.45	1.40
8440	12775	8.034313	TGAAAGGATATTGGACTATTGCTACT	57.966	34.615	0.00	0.00	0.00	2.57
8499	12853	2.888212	AGTCTGCTCTCTCTTTCAGGT	58.112	47.619	0.00	0.00	0.00	4.00
8501	12855	3.258123	AGTCTGCTCTCTCTTTCAGGTTC	59.742	47.826	0.00	0.00	0.00	3.62
8523	12879	8.793592	GGTTCCAGTCTTTACACAAGAAATTAT	58.206	33.333	0.00	0.00	0.00	1.28
8524	12880	9.612620	GTTCCAGTCTTTACACAAGAAATTATG	57.387	33.333	0.00	0.00	0.00	1.90
8619	13082	9.640963	TGCTCTGAAATTACTTCTAGAGTTTAC	57.359	33.333	0.00	0.00	39.27	2.01
8641	13104	5.799213	ACAGGGATGTAAGAACAGAAAGAG	58.201	41.667	0.00	0.00	39.49	2.85
8651	13114	5.028549	AGAACAGAAAGAGTTGCAGAGAA	57.971	39.130	0.00	0.00	0.00	2.87
8652	13115	4.813697	AGAACAGAAAGAGTTGCAGAGAAC	59.186	41.667	0.00	0.00	0.00	3.01
8793	13290	1.468520	CTATCCCCGCTTGTGTGTTTG	59.531	52.381	0.00	0.00	0.00	2.93
8795	13292	1.098712	TCCCCGCTTGTGTGTTTGTC	61.099	55.000	0.00	0.00	0.00	3.18
8796	13293	1.380403	CCCCGCTTGTGTGTTTGTCA	61.380	55.000	0.00	0.00	0.00	3.58
8797	13294	0.453793	CCCGCTTGTGTGTTTGTCAA	59.546	50.000	0.00	0.00	0.00	3.18
8805	13302	6.303022	CGCTTGTGTGTTTGTCAACATTATAG	59.697	38.462	0.00	0.00	44.85	1.31
8806	13303	6.088085	GCTTGTGTGTTTGTCAACATTATAGC	59.912	38.462	0.00	0.00	44.85	2.97
8809	13306	8.384607	TGTGTGTTTGTCAACATTATAGCTTA	57.615	30.769	0.00	0.00	44.85	3.09
8851	13357	6.186420	TGCTGATTAATATGGCAGGTTCTA	57.814	37.500	0.00	0.00	0.00	2.10
8872	13378	2.487762	ACTTCCAACCGTGTAATGCATG	59.512	45.455	0.00	0.00	0.00	4.06
8873	13379	2.481289	TCCAACCGTGTAATGCATGA	57.519	45.000	0.00	0.00	36.21	3.07
8874	13380	2.784347	TCCAACCGTGTAATGCATGAA	58.216	42.857	0.00	0.00	36.21	2.57
8875	13381	2.486203	TCCAACCGTGTAATGCATGAAC	59.514	45.455	0.00	2.36	36.21	3.18
8876	13382	2.415357	CCAACCGTGTAATGCATGAACC	60.415	50.000	0.00	0.00	36.21	3.62
8877	13383	1.083489	ACCGTGTAATGCATGAACCG	58.917	50.000	0.00	7.93	36.21	4.44
8915	13421	6.538742	TCCACTGCTCATTTGTATTTACTAGC	59.461	38.462	0.00	0.00	0.00	3.42
8957	13463	7.496591	TCCCACGGATAGTTAATAATGTTTGAC	59.503	37.037	0.00	0.00	0.00	3.18
8967	13473	8.336806	AGTTAATAATGTTTGACGAAACGAACA	58.663	29.630	13.54	13.54	43.92	3.18
8969	13475	9.666626	TTAATAATGTTTGACGAAACGAACAAT	57.333	25.926	14.55	10.91	44.08	2.71
8970	13476	5.864830	AATGTTTGACGAAACGAACAATG	57.135	34.783	14.55	0.00	44.08	2.82
8971	13477	4.343811	TGTTTGACGAAACGAACAATGT	57.656	36.364	10.48	0.00	43.92	2.71
8987	13496	9.168451	ACGAACAATGTACATAACAATCCAATA	57.832	29.630	9.21	0.00	42.70	1.90
9039	13551	5.515270	GGCAACCTAAAATCAAATAAGACGC	59.485	40.000	0.00	0.00	0.00	5.19
9064	13576	7.432869	CAGTTACCAATCAAATGTTCCTTTCA	58.567	34.615	0.00	0.00	0.00	2.69
9065	13577	7.382218	CAGTTACCAATCAAATGTTCCTTTCAC	59.618	37.037	0.00	0.00	0.00	3.18
9066	13578	4.870363	ACCAATCAAATGTTCCTTTCACG	58.130	39.130	0.00	0.00	0.00	4.35
9075	13587	3.664107	TGTTCCTTTCACGGAGATCTTG	58.336	45.455	0.00	0.00	33.89	3.02
9076	13588	3.003480	GTTCCTTTCACGGAGATCTTGG	58.997	50.000	0.00	0.00	33.89	3.61
9118	13630	1.065709	AGTCCGGATTTGGCGTACATT	60.066	47.619	7.81	0.00	0.00	2.71

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	7.164122	TGTTGCAAGAATACAGAGAAGAGATT	58.836	34.615	0.00	0.00	0.00	2.40
3	4	6.791887	TTGTTGCAAGAATACAGAGAAGAG	57.208	37.500	4.66	0.00	0.00	2.85
5	6	7.540055	GGATTTTGTTGCAAGAATACAGAGAAG	59.460	37.037	10.13	0.00	0.00	2.85
6	7	7.231317	AGGATTTTGTTGCAAGAATACAGAGAA	59.769	33.333	10.13	0.00	0.00	2.87
7	8	6.716628	AGGATTTTGTTGCAAGAATACAGAGA	59.283	34.615	10.13	0.00	0.00	3.10
9	10	6.899393	AGGATTTTGTTGCAAGAATACAGA	57.101	33.333	10.13	0.00	0.00	3.41
11	12	7.652909	CAGAAAGGATTTTGTTGCAAGAATACA	59.347	33.333	10.13	0.00	39.27	2.29
12	13	7.359514	GCAGAAAGGATTTTGTTGCAAGAATAC	60.360	37.037	10.13	7.00	39.27	1.89
13	14	6.646240	GCAGAAAGGATTTTGTTGCAAGAATA	59.354	34.615	10.13	5.88	39.27	1.75
14	15	5.467735	GCAGAAAGGATTTTGTTGCAAGAAT	59.532	36.000	10.13	6.13	39.27	2.40
15	16	4.810491	GCAGAAAGGATTTTGTTGCAAGAA	59.190	37.500	4.66	4.66	39.27	2.52
16	17	4.141981	TGCAGAAAGGATTTTGTTGCAAGA	60.142	37.500	0.00	0.00	42.69	3.02
17	18	4.121317	TGCAGAAAGGATTTTGTTGCAAG	58.879	39.130	0.00	0.00	42.69	4.01
18	19	4.134379	TGCAGAAAGGATTTTGTTGCAA	57.866	36.364	0.00	0.00	42.69	4.08
19	20	3.815856	TGCAGAAAGGATTTTGTTGCA	57.184	38.095	0.00	0.00	43.08	4.08
20	21	4.571984	ACTTTGCAGAAAGGATTTTGTTGC	59.428	37.500	3.31	0.00	42.66	4.17
21	22	6.667007	AACTTTGCAGAAAGGATTTTGTTG	57.333	33.333	3.31	0.00	42.66	3.33
22	23	7.075674	CAAACTTTGCAGAAAGGATTTTGTT	57.924	32.000	3.31	0.00	42.66	2.83
23	24	6.667007	CAAACTTTGCAGAAAGGATTTTGT	57.333	33.333	3.31	0.00	42.66	2.83
38	39	5.542616	TGGAAACATTGTTGCAAACTTTG	57.457	34.783	9.72	0.00	41.74	2.77
39	40	4.094739	GCTGGAAACATTGTTGCAAACTTT	59.905	37.500	9.72	0.00	44.53	2.66
40	41	3.622612	GCTGGAAACATTGTTGCAAACTT	59.377	39.130	9.72	0.00	44.53	2.66
41	42	3.197265	GCTGGAAACATTGTTGCAAACT	58.803	40.909	9.72	0.00	44.53	2.66
42	43	2.033832	CGCTGGAAACATTGTTGCAAAC	60.034	45.455	9.72	0.00	44.49	2.93
43	44	2.200067	CGCTGGAAACATTGTTGCAAA	58.800	42.857	9.72	0.00	41.51	3.68
44	45	1.135915	ACGCTGGAAACATTGTTGCAA	59.864	42.857	9.72	0.00	41.51	4.08
45	46	0.743688	ACGCTGGAAACATTGTTGCA	59.256	45.000	9.72	2.23	41.51	4.08
46	47	1.001378	AGACGCTGGAAACATTGTTGC	60.001	47.619	2.13	0.08	41.51	4.17
47	48	3.003689	AGAAGACGCTGGAAACATTGTTG	59.996	43.478	2.13	0.00	41.51	3.33
48	49	3.214328	AGAAGACGCTGGAAACATTGTT	58.786	40.909	0.00	0.00	41.51	2.83
49	50	2.808543	GAGAAGACGCTGGAAACATTGT	59.191	45.455	0.00	0.00	41.51	2.71
50	51	3.070018	AGAGAAGACGCTGGAAACATTG	58.930	45.455	0.00	0.00	41.51	2.82
51	52	3.070018	CAGAGAAGACGCTGGAAACATT	58.930	45.455	0.00	0.00	41.51	2.71
52	53	2.037772	ACAGAGAAGACGCTGGAAACAT	59.962	45.455	0.00	0.00	45.66	2.71
53	54	1.412710	ACAGAGAAGACGCTGGAAACA	59.587	47.619	0.00	0.00	45.66	2.83
54	55	2.156343	ACAGAGAAGACGCTGGAAAC	57.844	50.000	0.00	0.00	45.66	2.78
55	56	4.495422	GAATACAGAGAAGACGCTGGAAA	58.505	43.478	0.00	0.00	45.66	3.13
56	57	3.119101	GGAATACAGAGAAGACGCTGGAA	60.119	47.826	0.00	0.00	45.66	3.53
57	58	2.427453	GGAATACAGAGAAGACGCTGGA	59.573	50.000	0.00	0.00	45.66	3.86
58	59	2.428890	AGGAATACAGAGAAGACGCTGG	59.571	50.000	0.00	0.00	45.66	4.85
59	60	3.443037	CAGGAATACAGAGAAGACGCTG	58.557	50.000	0.00	0.00	46.53	5.18
60	61	2.159170	GCAGGAATACAGAGAAGACGCT	60.159	50.000	0.00	0.00	0.00	5.07
61	62	2.197577	GCAGGAATACAGAGAAGACGC	58.802	52.381	0.00	0.00	0.00	5.19
62	63	3.510388	TGCAGGAATACAGAGAAGACG	57.490	47.619	0.00	0.00	0.00	4.18
63	64	4.569943	TGTTGCAGGAATACAGAGAAGAC	58.430	43.478	0.00	0.00	0.00	3.01
64	65	4.890158	TGTTGCAGGAATACAGAGAAGA	57.110	40.909	0.00	0.00	0.00	2.87
65	66	5.121454	GTCTTGTTGCAGGAATACAGAGAAG	59.879	44.000	0.00	0.00	0.00	2.85
66	67	4.997395	GTCTTGTTGCAGGAATACAGAGAA	59.003	41.667	0.00	0.00	0.00	2.87
67	68	4.284490	AGTCTTGTTGCAGGAATACAGAGA	59.716	41.667	0.00	0.00	0.00	3.10
68	69	4.573900	AGTCTTGTTGCAGGAATACAGAG	58.426	43.478	0.00	0.00	0.00	3.35
69	70	4.623932	AGTCTTGTTGCAGGAATACAGA	57.376	40.909	0.00	0.00	0.00	3.41
70	71	5.695851	AAAGTCTTGTTGCAGGAATACAG	57.304	39.130	0.00	0.00	0.00	2.74
71	72	5.359576	ACAAAAGTCTTGTTGCAGGAATACA	59.640	36.000	0.00	0.00	0.00	2.29
72	73	5.831997	ACAAAAGTCTTGTTGCAGGAATAC	58.168	37.500	0.00	0.00	0.00	1.89
73	74	5.827797	AGACAAAAGTCTTGTTGCAGGAATA	59.172	36.000	0.00	0.00	31.96	1.75
74	75	4.646492	AGACAAAAGTCTTGTTGCAGGAAT	59.354	37.500	0.00	0.00	31.96	3.01
75	76	4.016444	AGACAAAAGTCTTGTTGCAGGAA	58.984	39.130	0.00	0.00	31.96	3.36
76	77	3.620488	AGACAAAAGTCTTGTTGCAGGA	58.380	40.909	0.00	0.00	31.96	3.86
77	78	3.378112	TGAGACAAAAGTCTTGTTGCAGG	59.622	43.478	0.00	0.00	33.21	4.85
78	79	4.621068	TGAGACAAAAGTCTTGTTGCAG	57.379	40.909	0.00	0.00	33.21	4.41
79	80	5.384063	TTTGAGACAAAAGTCTTGTTGCA	57.616	34.783	0.00	0.00	33.21	4.08
80	81	6.704512	TTTTTGAGACAAAAGTCTTGTTGC	57.295	33.333	9.09	0.00	33.21	4.17
101	102	7.282675	TGCAACATGATCTTTGTTCCAATTTTT	59.717	29.630	0.00	0.00	35.18	1.94
102	103	6.766944	TGCAACATGATCTTTGTTCCAATTTT	59.233	30.769	0.00	0.00	35.18	1.82
103	104	6.289834	TGCAACATGATCTTTGTTCCAATTT	58.710	32.000	0.00	0.00	35.18	1.82
104	105	5.856156	TGCAACATGATCTTTGTTCCAATT	58.144	33.333	0.00	0.00	35.18	2.32
105	106	5.244402	TCTGCAACATGATCTTTGTTCCAAT	59.756	36.000	0.00	0.00	35.18	3.16
106	107	4.583907	TCTGCAACATGATCTTTGTTCCAA	59.416	37.500	0.00	1.80	35.18	3.53
107	108	4.143543	TCTGCAACATGATCTTTGTTCCA	58.856	39.130	0.00	8.09	35.18	3.53
108	109	4.771590	TCTGCAACATGATCTTTGTTCC	57.228	40.909	0.00	4.46	35.18	3.62
109	110	6.345250	CGTTTTCTGCAACATGATCTTTGTTC	60.345	38.462	0.00	7.59	35.18	3.18
110	111	5.459762	CGTTTTCTGCAACATGATCTTTGTT	59.540	36.000	0.00	8.30	37.79	2.83
111	112	4.977963	CGTTTTCTGCAACATGATCTTTGT	59.022	37.500	0.00	0.00	0.00	2.83
112	113	4.977963	ACGTTTTCTGCAACATGATCTTTG	59.022	37.500	0.00	0.00	0.00	2.77
113	114	4.977963	CACGTTTTCTGCAACATGATCTTT	59.022	37.500	0.00	0.00	0.00	2.52
114	115	4.275689	TCACGTTTTCTGCAACATGATCTT	59.724	37.500	0.00	0.00	0.00	2.40
115	116	3.814842	TCACGTTTTCTGCAACATGATCT	59.185	39.130	0.00	0.00	0.00	2.75
116	117	4.145876	TCACGTTTTCTGCAACATGATC	57.854	40.909	0.00	0.00	0.00	2.92
117	118	4.275689	TCTTCACGTTTTCTGCAACATGAT	59.724	37.500	0.00	0.00	29.51	2.45
118	119	3.625313	TCTTCACGTTTTCTGCAACATGA	59.375	39.130	0.00	0.00	27.27	3.07
119	120	3.951306	TCTTCACGTTTTCTGCAACATG	58.049	40.909	0.00	0.00	0.00	3.21
120	121	3.876914	TCTCTTCACGTTTTCTGCAACAT	59.123	39.130	0.00	0.00	0.00	2.71
121	122	3.266636	TCTCTTCACGTTTTCTGCAACA	58.733	40.909	0.00	0.00	0.00	3.33
122	123	3.555956	TCTCTCTTCACGTTTTCTGCAAC	59.444	43.478	0.00	0.00	0.00	4.17
123	124	3.792401	TCTCTCTTCACGTTTTCTGCAA	58.208	40.909	0.00	0.00	0.00	4.08
124	125	3.068165	TCTCTCTCTTCACGTTTTCTGCA	59.932	43.478	0.00	0.00	0.00	4.41
125	126	3.643763	TCTCTCTCTTCACGTTTTCTGC	58.356	45.455	0.00	0.00	0.00	4.26
126	127	6.847400	TCTATCTCTCTCTTCACGTTTTCTG	58.153	40.000	0.00	0.00	0.00	3.02
127	128	6.882140	TCTCTATCTCTCTCTTCACGTTTTCT	59.118	38.462	0.00	0.00	0.00	2.52
128	129	7.079182	TCTCTATCTCTCTCTTCACGTTTTC	57.921	40.000	0.00	0.00	0.00	2.29
129	130	6.094881	CCTCTCTATCTCTCTCTTCACGTTTT	59.905	42.308	0.00	0.00	0.00	2.43
130	131	5.588648	CCTCTCTATCTCTCTCTTCACGTTT	59.411	44.000	0.00	0.00	0.00	3.60
131	132	5.123227	CCTCTCTATCTCTCTCTTCACGTT	58.877	45.833	0.00	0.00	0.00	3.99
132	133	4.444306	CCCTCTCTATCTCTCTCTTCACGT	60.444	50.000	0.00	0.00	0.00	4.49
133	134	4.065088	CCCTCTCTATCTCTCTCTTCACG	58.935	52.174	0.00	0.00	0.00	4.35
134	135	5.304686	TCCCTCTCTATCTCTCTCTTCAC	57.695	47.826	0.00	0.00	0.00	3.18
135	136	5.985175	TTCCCTCTCTATCTCTCTCTTCA	57.015	43.478	0.00	0.00	0.00	3.02
136	137	5.241728	GCTTTCCCTCTCTATCTCTCTCTTC	59.758	48.000	0.00	0.00	0.00	2.87
137	138	5.103515	AGCTTTCCCTCTCTATCTCTCTCTT	60.104	44.000	0.00	0.00	0.00	2.85
138	139	4.416848	AGCTTTCCCTCTCTATCTCTCTCT	59.583	45.833	0.00	0.00	0.00	3.10
139	140	4.729868	AGCTTTCCCTCTCTATCTCTCTC	58.270	47.826	0.00	0.00	0.00	3.20
140	141	4.814224	AGCTTTCCCTCTCTATCTCTCT	57.186	45.455	0.00	0.00	0.00	3.10
141	142	5.010282	CCTAGCTTTCCCTCTCTATCTCTC	58.990	50.000	0.00	0.00	0.00	3.20
142	143	4.202673	CCCTAGCTTTCCCTCTCTATCTCT	60.203	50.000	0.00	0.00	0.00	3.10
143	144	4.086457	CCCTAGCTTTCCCTCTCTATCTC	58.914	52.174	0.00	0.00	0.00	2.75
144	145	3.469389	ACCCTAGCTTTCCCTCTCTATCT	59.531	47.826	0.00	0.00	0.00	1.98
145	146	3.576550	CACCCTAGCTTTCCCTCTCTATC	59.423	52.174	0.00	0.00	0.00	2.08
146	147	3.207777	TCACCCTAGCTTTCCCTCTCTAT	59.792	47.826	0.00	0.00	0.00	1.98
147	148	2.585900	TCACCCTAGCTTTCCCTCTCTA	59.414	50.000	0.00	0.00	0.00	2.43
148	149	1.362932	TCACCCTAGCTTTCCCTCTCT	59.637	52.381	0.00	0.00	0.00	3.10
149	150	1.760029	CTCACCCTAGCTTTCCCTCTC	59.240	57.143	0.00	0.00	0.00	3.20
150	151	1.362932	TCTCACCCTAGCTTTCCCTCT	59.637	52.381	0.00	0.00	0.00	3.69
151	152	1.760029	CTCTCACCCTAGCTTTCCCTC	59.240	57.143	0.00	0.00	0.00	4.30
152	153	1.623834	CCTCTCACCCTAGCTTTCCCT	60.624	57.143	0.00	0.00	0.00	4.20
153	154	0.833949	CCTCTCACCCTAGCTTTCCC	59.166	60.000	0.00	0.00	0.00	3.97
154	155	0.179234	GCCTCTCACCCTAGCTTTCC	59.821	60.000	0.00	0.00	0.00	3.13
155	156	0.179097	CGCCTCTCACCCTAGCTTTC	60.179	60.000	0.00	0.00	0.00	2.62
156	157	0.905337	ACGCCTCTCACCCTAGCTTT	60.905	55.000	0.00	0.00	0.00	3.51
157	158	1.305381	ACGCCTCTCACCCTAGCTT	60.305	57.895	0.00	0.00	0.00	3.74
158	159	2.055042	CACGCCTCTCACCCTAGCT	61.055	63.158	0.00	0.00	0.00	3.32
159	160	2.496817	CACGCCTCTCACCCTAGC	59.503	66.667	0.00	0.00	0.00	3.42
160	161	2.427245	CCCACGCCTCTCACCCTAG	61.427	68.421	0.00	0.00	0.00	3.02
161	162	2.363795	CCCACGCCTCTCACCCTA	60.364	66.667	0.00	0.00	0.00	3.53
185	186	1.100463	TCCTTCTTGTTGCGCTGCAA	61.100	50.000	9.73	12.73	46.80	4.08
186	187	1.509644	CTCCTTCTTGTTGCGCTGCA	61.510	55.000	9.73	4.43	36.47	4.41
187	188	1.208614	CTCCTTCTTGTTGCGCTGC	59.791	57.895	9.73	1.25	0.00	5.25
188	189	1.580845	CCCTCCTTCTTGTTGCGCTG	61.581	60.000	9.73	0.00	0.00	5.18
189	190	1.302832	CCCTCCTTCTTGTTGCGCT	60.303	57.895	9.73	0.00	0.00	5.92
190	191	2.335712	CCCCTCCTTCTTGTTGCGC	61.336	63.158	0.00	0.00	0.00	6.09
191	192	1.675641	CCCCCTCCTTCTTGTTGCG	60.676	63.158	0.00	0.00	0.00	4.85
192	193	4.423231	CCCCCTCCTTCTTGTTGC	57.577	61.111	0.00	0.00	0.00	4.17
207	208	3.412408	GAAGCACCTCCCCTCCCC	61.412	72.222	0.00	0.00	0.00	4.81
208	209	3.412408	GGAAGCACCTCCCCTCCC	61.412	72.222	0.00	0.00	35.41	4.30
209	210	2.231380	TTGGAAGCACCTCCCCTCC	61.231	63.158	1.91	0.00	39.86	4.30
210	211	1.002011	GTTGGAAGCACCTCCCCTC	60.002	63.158	1.91	0.00	39.86	4.30
211	212	1.774217	TGTTGGAAGCACCTCCCCT	60.774	57.895	1.91	0.00	39.86	4.79
212	213	1.303643	CTGTTGGAAGCACCTCCCC	60.304	63.158	1.91	0.00	39.86	4.81
213	214	1.973812	GCTGTTGGAAGCACCTCCC	60.974	63.158	1.91	0.00	43.01	4.30
214	215	2.328099	CGCTGTTGGAAGCACCTCC	61.328	63.158	1.91	0.00	43.73	4.30
215	216	1.294659	CTCGCTGTTGGAAGCACCTC	61.295	60.000	1.91	0.00	43.73	3.85
216	217	1.302033	CTCGCTGTTGGAAGCACCT	60.302	57.895	1.91	0.00	43.73	4.00
217	218	0.674895	ATCTCGCTGTTGGAAGCACC	60.675	55.000	0.00	0.00	43.73	5.01
218	219	0.445436	CATCTCGCTGTTGGAAGCAC	59.555	55.000	0.00	0.00	43.73	4.40
219	220	0.674581	CCATCTCGCTGTTGGAAGCA	60.675	55.000	0.00	0.00	43.73	3.91
220	221	0.674895	ACCATCTCGCTGTTGGAAGC	60.675	55.000	10.79	0.00	38.55	3.86
221	222	1.363744	GACCATCTCGCTGTTGGAAG	58.636	55.000	10.79	0.00	38.55	3.46
222	223	0.036388	GGACCATCTCGCTGTTGGAA	60.036	55.000	10.79	0.00	38.55	3.53
223	224	0.904865	AGGACCATCTCGCTGTTGGA	60.905	55.000	10.79	0.00	38.55	3.53
224	225	0.742281	CAGGACCATCTCGCTGTTGG	60.742	60.000	0.00	4.52	40.48	3.77
225	226	0.036952	ACAGGACCATCTCGCTGTTG	60.037	55.000	0.00	0.00	30.42	3.33
226	227	0.247736	GACAGGACCATCTCGCTGTT	59.752	55.000	0.00	0.00	33.16	3.16
227	228	0.613292	AGACAGGACCATCTCGCTGT	60.613	55.000	0.00	0.00	34.74	4.40
228	229	1.066303	GTAGACAGGACCATCTCGCTG	59.934	57.143	1.68	0.00	0.00	5.18
229	230	1.341089	TGTAGACAGGACCATCTCGCT	60.341	52.381	1.68	0.00	0.00	4.93
230	231	1.066303	CTGTAGACAGGACCATCTCGC	59.934	57.143	1.47	0.00	40.20	5.03
231	232	1.066303	GCTGTAGACAGGACCATCTCG	59.934	57.143	11.51	0.00	43.94	4.04
232	233	2.100584	CTGCTGTAGACAGGACCATCTC	59.899	54.545	11.51	0.00	43.94	2.75
233	234	2.106566	CTGCTGTAGACAGGACCATCT	58.893	52.381	11.51	0.00	43.94	2.90
234	235	1.472376	GCTGCTGTAGACAGGACCATC	60.472	57.143	11.51	0.00	43.94	3.51
235	236	0.539051	GCTGCTGTAGACAGGACCAT	59.461	55.000	11.51	0.00	43.94	3.55
236	237	1.877576	CGCTGCTGTAGACAGGACCA	61.878	60.000	11.51	0.77	43.94	4.02
237	238	1.153745	CGCTGCTGTAGACAGGACC	60.154	63.158	11.51	0.00	43.94	4.46
238	239	1.153745	CCGCTGCTGTAGACAGGAC	60.154	63.158	11.51	3.42	43.94	3.85
239	240	1.304134	TCCGCTGCTGTAGACAGGA	60.304	57.895	11.51	7.72	43.94	3.86
240	241	1.153745	GTCCGCTGCTGTAGACAGG	60.154	63.158	11.51	0.00	43.94	4.00
241	242	0.174389	ATGTCCGCTGCTGTAGACAG	59.826	55.000	17.80	5.26	42.13	3.51
242	243	0.173481	GATGTCCGCTGCTGTAGACA	59.827	55.000	16.10	16.10	42.95	3.41
243	244	0.528684	GGATGTCCGCTGCTGTAGAC	60.529	60.000	0.00	7.78	0.00	2.59
244	245	0.684479	AGGATGTCCGCTGCTGTAGA	60.684	55.000	0.00	0.00	42.08	2.59
245	246	0.529337	CAGGATGTCCGCTGCTGTAG	60.529	60.000	0.00	0.00	42.08	2.74
246	247	0.970427	TCAGGATGTCCGCTGCTGTA	60.970	55.000	0.00	0.00	42.08	2.74
247	248	1.620739	ATCAGGATGTCCGCTGCTGT	61.621	55.000	0.00	0.00	42.08	4.40
248	249	1.145598	ATCAGGATGTCCGCTGCTG	59.854	57.895	0.00	0.00	42.08	4.41
249	250	1.145598	CATCAGGATGTCCGCTGCT	59.854	57.895	0.00	0.00	42.08	4.24
250	251	1.890979	CCATCAGGATGTCCGCTGC	60.891	63.158	8.35	0.00	42.08	5.25
251	252	1.825341	TCCATCAGGATGTCCGCTG	59.175	57.895	8.35	0.00	39.61	5.18
252	253	4.380986	TCCATCAGGATGTCCGCT	57.619	55.556	8.35	0.00	39.61	5.52
261	262	1.100510	CACAACCAGCATCCATCAGG	58.899	55.000	0.00	0.00	0.00	3.86
262	263	1.830279	ACACAACCAGCATCCATCAG	58.170	50.000	0.00	0.00	0.00	2.90
263	264	2.291209	AACACAACCAGCATCCATCA	57.709	45.000	0.00	0.00	0.00	3.07
264	265	2.297033	ACAAACACAACCAGCATCCATC	59.703	45.455	0.00	0.00	0.00	3.51
265	266	2.036217	CACAAACACAACCAGCATCCAT	59.964	45.455	0.00	0.00	0.00	3.41
266	267	1.408340	CACAAACACAACCAGCATCCA	59.592	47.619	0.00	0.00	0.00	3.41
267	268	1.869342	GCACAAACACAACCAGCATCC	60.869	52.381	0.00	0.00	0.00	3.51
268	269	1.490621	GCACAAACACAACCAGCATC	58.509	50.000	0.00	0.00	0.00	3.91
269	270	0.248990	CGCACAAACACAACCAGCAT	60.249	50.000	0.00	0.00	0.00	3.79
270	271	1.138459	CGCACAAACACAACCAGCA	59.862	52.632	0.00	0.00	0.00	4.41
271	272	1.138671	ACGCACAAACACAACCAGC	59.861	52.632	0.00	0.00	0.00	4.85
272	273	0.170116	ACACGCACAAACACAACCAG	59.830	50.000	0.00	0.00	0.00	4.00
273	274	0.109551	CACACGCACAAACACAACCA	60.110	50.000	0.00	0.00	0.00	3.67
274	275	0.169230	TCACACGCACAAACACAACC	59.831	50.000	0.00	0.00	0.00	3.77
275	276	1.129624	TCTCACACGCACAAACACAAC	59.870	47.619	0.00	0.00	0.00	3.32
276	277	1.396648	CTCTCACACGCACAAACACAA	59.603	47.619	0.00	0.00	0.00	3.33
277	278	1.006086	CTCTCACACGCACAAACACA	58.994	50.000	0.00	0.00	0.00	3.72
278	279	0.304705	CCTCTCACACGCACAAACAC	59.695	55.000	0.00	0.00	0.00	3.32
279	280	0.813610	CCCTCTCACACGCACAAACA	60.814	55.000	0.00	0.00	0.00	2.83
280	281	0.531974	TCCCTCTCACACGCACAAAC	60.532	55.000	0.00	0.00	0.00	2.93
281	282	0.396435	ATCCCTCTCACACGCACAAA	59.604	50.000	0.00	0.00	0.00	2.83
282	283	0.320683	CATCCCTCTCACACGCACAA	60.321	55.000	0.00	0.00	0.00	3.33
283	284	1.184970	TCATCCCTCTCACACGCACA	61.185	55.000	0.00	0.00	0.00	4.57
284	285	0.459237	CTCATCCCTCTCACACGCAC	60.459	60.000	0.00	0.00	0.00	5.34
285	286	1.893062	CTCATCCCTCTCACACGCA	59.107	57.895	0.00	0.00	0.00	5.24
286	287	1.520342	GCTCATCCCTCTCACACGC	60.520	63.158	0.00	0.00	0.00	5.34
287	288	1.226802	CGCTCATCCCTCTCACACG	60.227	63.158	0.00	0.00	0.00	4.49
288	289	1.142748	CCGCTCATCCCTCTCACAC	59.857	63.158	0.00	0.00	0.00	3.82
289	290	0.033503	TACCGCTCATCCCTCTCACA	60.034	55.000	0.00	0.00	0.00	3.58
290	291	1.000283	CATACCGCTCATCCCTCTCAC	60.000	57.143	0.00	0.00	0.00	3.51
291	292	1.332195	CATACCGCTCATCCCTCTCA	58.668	55.000	0.00	0.00	0.00	3.27
292	293	0.605589	CCATACCGCTCATCCCTCTC	59.394	60.000	0.00	0.00	0.00	3.20
293	294	0.188587	TCCATACCGCTCATCCCTCT	59.811	55.000	0.00	0.00	0.00	3.69
294	295	1.048601	TTCCATACCGCTCATCCCTC	58.951	55.000	0.00	0.00	0.00	4.30
295	296	1.417890	CTTTCCATACCGCTCATCCCT	59.582	52.381	0.00	0.00	0.00	4.20
296	297	1.416401	TCTTTCCATACCGCTCATCCC	59.584	52.381	0.00	0.00	0.00	3.85
297	298	2.760374	CTCTTTCCATACCGCTCATCC	58.240	52.381	0.00	0.00	0.00	3.51
298	299	2.139118	GCTCTTTCCATACCGCTCATC	58.861	52.381	0.00	0.00	0.00	2.92
299	300	1.539065	CGCTCTTTCCATACCGCTCAT	60.539	52.381	0.00	0.00	0.00	2.90
300	301	0.179111	CGCTCTTTCCATACCGCTCA	60.179	55.000	0.00	0.00	0.00	4.26
301	302	0.179108	ACGCTCTTTCCATACCGCTC	60.179	55.000	0.00	0.00	0.00	5.03
302	303	0.249398	AACGCTCTTTCCATACCGCT	59.751	50.000	0.00	0.00	0.00	5.52
303	304	0.651031	GAACGCTCTTTCCATACCGC	59.349	55.000	0.00	0.00	0.00	5.68
304	305	1.927174	CAGAACGCTCTTTCCATACCG	59.073	52.381	0.00	0.00	0.00	4.02
305	306	2.093658	TCCAGAACGCTCTTTCCATACC	60.094	50.000	0.00	0.00	0.00	2.73
306	307	3.119101	TCTCCAGAACGCTCTTTCCATAC	60.119	47.826	0.00	0.00	0.00	2.39
307	308	3.096852	TCTCCAGAACGCTCTTTCCATA	58.903	45.455	0.00	0.00	0.00	2.74
308	309	1.902508	TCTCCAGAACGCTCTTTCCAT	59.097	47.619	0.00	0.00	0.00	3.41
309	310	1.338107	TCTCCAGAACGCTCTTTCCA	58.662	50.000	0.00	0.00	0.00	3.53
310	311	2.028930	TCTTCTCCAGAACGCTCTTTCC	60.029	50.000	0.00	0.00	0.00	3.13
311	312	2.990514	GTCTTCTCCAGAACGCTCTTTC	59.009	50.000	0.00	0.00	31.28	2.62
312	313	2.608261	CGTCTTCTCCAGAACGCTCTTT	60.608	50.000	0.00	0.00	31.28	2.52
313	314	1.068194	CGTCTTCTCCAGAACGCTCTT	60.068	52.381	0.00	0.00	31.28	2.85
314	315	0.523966	CGTCTTCTCCAGAACGCTCT	59.476	55.000	0.00	0.00	31.28	4.09
315	316	0.241481	ACGTCTTCTCCAGAACGCTC	59.759	55.000	1.55	0.00	31.28	5.03
316	317	0.039074	CACGTCTTCTCCAGAACGCT	60.039	55.000	1.55	0.00	31.28	5.07
317	318	0.039437	TCACGTCTTCTCCAGAACGC	60.039	55.000	1.55	0.00	31.28	4.84
318	319	1.687628	GTCACGTCTTCTCCAGAACG	58.312	55.000	0.00	0.29	31.28	3.95
319	320	1.666311	CCGTCACGTCTTCTCCAGAAC	60.666	57.143	0.00	0.00	31.28	3.01
320	321	0.596577	CCGTCACGTCTTCTCCAGAA	59.403	55.000	0.00	0.00	31.28	3.02
321	322	0.250597	TCCGTCACGTCTTCTCCAGA	60.251	55.000	0.00	0.00	0.00	3.86
322	323	0.109689	GTCCGTCACGTCTTCTCCAG	60.110	60.000	0.00	0.00	0.00	3.86
323	324	0.536687	AGTCCGTCACGTCTTCTCCA	60.537	55.000	0.00	0.00	0.00	3.86
324	325	0.109689	CAGTCCGTCACGTCTTCTCC	60.110	60.000	0.00	0.00	0.00	3.71
325	326	0.873054	TCAGTCCGTCACGTCTTCTC	59.127	55.000	0.00	0.00	0.00	2.87
326	327	0.592148	GTCAGTCCGTCACGTCTTCT	59.408	55.000	0.00	0.00	0.00	2.85
327	328	0.725118	CGTCAGTCCGTCACGTCTTC	60.725	60.000	0.00	0.00	0.00	2.87
328	329	1.281960	CGTCAGTCCGTCACGTCTT	59.718	57.895	0.00	0.00	0.00	3.01
329	330	2.614446	CCGTCAGTCCGTCACGTCT	61.614	63.158	0.00	0.00	0.00	4.18
330	331	2.126965	CCGTCAGTCCGTCACGTC	60.127	66.667	0.00	0.00	0.00	4.34
331	332	2.008268	AAACCGTCAGTCCGTCACGT	62.008	55.000	0.00	0.00	0.00	4.49
332	333	1.299620	AAACCGTCAGTCCGTCACG	60.300	57.895	0.00	0.00	0.00	4.35
333	334	0.249155	TCAAACCGTCAGTCCGTCAC	60.249	55.000	0.00	0.00	0.00	3.67
334	335	0.677288	ATCAAACCGTCAGTCCGTCA	59.323	50.000	0.00	0.00	0.00	4.35
335	336	1.725164	GAATCAAACCGTCAGTCCGTC	59.275	52.381	0.00	0.00	0.00	4.79
336	337	1.343465	AGAATCAAACCGTCAGTCCGT	59.657	47.619	0.00	0.00	0.00	4.69
337	338	2.080286	AGAATCAAACCGTCAGTCCG	57.920	50.000	0.00	0.00	0.00	4.79
338	339	4.189639	ACTAGAATCAAACCGTCAGTCC	57.810	45.455	0.00	0.00	0.00	3.85
339	340	4.792189	CGTACTAGAATCAAACCGTCAGTC	59.208	45.833	0.00	0.00	0.00	3.51
340	341	4.217118	ACGTACTAGAATCAAACCGTCAGT	59.783	41.667	0.00	0.00	0.00	3.41
341	342	4.730657	ACGTACTAGAATCAAACCGTCAG	58.269	43.478	0.00	0.00	0.00	3.51
342	343	4.771590	ACGTACTAGAATCAAACCGTCA	57.228	40.909	0.00	0.00	0.00	4.35
343	344	4.725754	CGTACGTACTAGAATCAAACCGTC	59.274	45.833	22.55	0.00	0.00	4.79
344	345	4.391830	TCGTACGTACTAGAATCAAACCGT	59.608	41.667	22.55	0.00	0.00	4.83
345	346	4.897224	TCGTACGTACTAGAATCAAACCG	58.103	43.478	22.55	5.68	0.00	4.44
346	347	6.413235	GTGATCGTACGTACTAGAATCAAACC	59.587	42.308	22.55	10.64	0.00	3.27
347	348	6.138236	CGTGATCGTACGTACTAGAATCAAAC	59.862	42.308	22.55	12.94	39.13	2.93
348	349	6.187480	CGTGATCGTACGTACTAGAATCAAA	58.813	40.000	22.55	4.35	39.13	2.69
349	350	5.277011	CCGTGATCGTACGTACTAGAATCAA	60.277	44.000	22.55	8.77	42.24	2.57
350	351	4.209911	CCGTGATCGTACGTACTAGAATCA	59.790	45.833	22.55	19.87	42.24	2.57
351	352	4.445718	TCCGTGATCGTACGTACTAGAATC	59.554	45.833	22.55	17.97	42.24	2.52
352	353	4.210120	GTCCGTGATCGTACGTACTAGAAT	59.790	45.833	22.55	10.95	42.24	2.40
353	354	3.551890	GTCCGTGATCGTACGTACTAGAA	59.448	47.826	22.55	6.77	42.24	2.10
354	355	3.116300	GTCCGTGATCGTACGTACTAGA	58.884	50.000	22.55	14.01	42.24	2.43
355	356	2.860136	TGTCCGTGATCGTACGTACTAG	59.140	50.000	22.55	9.03	42.24	2.57
356	357	2.603110	GTGTCCGTGATCGTACGTACTA	59.397	50.000	22.55	13.18	42.24	1.82
357	358	1.394917	GTGTCCGTGATCGTACGTACT	59.605	52.381	22.55	5.64	42.24	2.73
358	359	1.802839	GTGTCCGTGATCGTACGTAC	58.197	55.000	15.90	15.90	42.24	3.67
359	360	0.369931	CGTGTCCGTGATCGTACGTA	59.630	55.000	16.05	2.34	42.24	3.57
360	361	1.133253	CGTGTCCGTGATCGTACGT	59.867	57.895	16.05	2.33	42.24	3.57
361	362	3.958083	CGTGTCCGTGATCGTACG	58.042	61.111	9.53	9.53	43.35	3.67
371	372	1.081094	GACCCCATTTTACGTGTCCG	58.919	55.000	0.00	0.00	40.83	4.79
372	373	2.188062	TGACCCCATTTTACGTGTCC	57.812	50.000	0.00	0.00	0.00	4.02
373	374	3.404899	TCTTGACCCCATTTTACGTGTC	58.595	45.455	0.00	0.00	0.00	3.67
374	375	3.495434	TCTTGACCCCATTTTACGTGT	57.505	42.857	0.00	0.00	0.00	4.49
375	376	3.190535	CCTTCTTGACCCCATTTTACGTG	59.809	47.826	0.00	0.00	0.00	4.49
376	377	3.418047	CCTTCTTGACCCCATTTTACGT	58.582	45.455	0.00	0.00	0.00	3.57
377	378	2.163613	GCCTTCTTGACCCCATTTTACG	59.836	50.000	0.00	0.00	0.00	3.18
378	379	3.056821	GTGCCTTCTTGACCCCATTTTAC	60.057	47.826	0.00	0.00	0.00	2.01
379	380	3.161866	GTGCCTTCTTGACCCCATTTTA	58.838	45.455	0.00	0.00	0.00	1.52
380	381	1.970640	GTGCCTTCTTGACCCCATTTT	59.029	47.619	0.00	0.00	0.00	1.82
381	382	1.133199	TGTGCCTTCTTGACCCCATTT	60.133	47.619	0.00	0.00	0.00	2.32
382	383	0.482446	TGTGCCTTCTTGACCCCATT	59.518	50.000	0.00	0.00	0.00	3.16
383	384	0.706433	ATGTGCCTTCTTGACCCCAT	59.294	50.000	0.00	0.00	0.00	4.00
384	385	0.251297	CATGTGCCTTCTTGACCCCA	60.251	55.000	0.00	0.00	0.00	4.96
385	386	0.251341	ACATGTGCCTTCTTGACCCC	60.251	55.000	0.00	0.00	0.00	4.95
386	387	1.168714	GACATGTGCCTTCTTGACCC	58.831	55.000	1.15	0.00	0.00	4.46
387	388	1.896220	TGACATGTGCCTTCTTGACC	58.104	50.000	1.15	0.00	0.00	4.02
388	389	3.425359	CGATTGACATGTGCCTTCTTGAC	60.425	47.826	1.15	0.00	0.00	3.18
389	390	2.743664	CGATTGACATGTGCCTTCTTGA	59.256	45.455	1.15	0.00	0.00	3.02
390	391	2.159476	CCGATTGACATGTGCCTTCTTG	60.159	50.000	1.15	0.00	0.00	3.02
391	392	2.086869	CCGATTGACATGTGCCTTCTT	58.913	47.619	1.15	0.00	0.00	2.52
392	393	1.278985	TCCGATTGACATGTGCCTTCT	59.721	47.619	1.15	0.00	0.00	2.85
393	394	1.667724	CTCCGATTGACATGTGCCTTC	59.332	52.381	1.15	0.00	0.00	3.46
394	395	1.742761	CTCCGATTGACATGTGCCTT	58.257	50.000	1.15	0.00	0.00	4.35
395	396	0.745845	GCTCCGATTGACATGTGCCT	60.746	55.000	1.15	0.00	0.00	4.75
396	397	1.718757	GGCTCCGATTGACATGTGCC	61.719	60.000	1.15	2.99	0.00	5.01
397	398	1.723870	GGCTCCGATTGACATGTGC	59.276	57.895	1.15	0.00	0.00	4.57
398	399	2.009108	CGGCTCCGATTGACATGTG	58.991	57.895	1.15	0.00	42.83	3.21
399	400	1.815421	GCGGCTCCGATTGACATGT	60.815	57.895	13.11	0.00	42.83	3.21
400	401	2.537560	GGCGGCTCCGATTGACATG	61.538	63.158	13.11	0.00	42.83	3.21
401	402	2.203070	GGCGGCTCCGATTGACAT	60.203	61.111	13.11	0.00	42.83	3.06
418	419	1.957711	TTTAACATTCGCGTCCGCCG	61.958	55.000	5.77	1.85	37.98	6.46
419	420	0.375803	ATTTAACATTCGCGTCCGCC	59.624	50.000	5.77	0.00	37.98	6.13
420	421	1.593793	GGATTTAACATTCGCGTCCGC	60.594	52.381	5.77	0.68	37.85	5.54
421	422	1.331680	CGGATTTAACATTCGCGTCCG	60.332	52.381	13.38	13.38	40.74	4.79
422	423	1.593793	GCGGATTTAACATTCGCGTCC	60.594	52.381	5.77	0.58	37.12	4.79
423	424	1.593793	GGCGGATTTAACATTCGCGTC	60.594	52.381	5.77	0.00	46.22	5.19
424	425	0.375803	GGCGGATTTAACATTCGCGT	59.624	50.000	5.77	0.00	46.22	6.01
425	426	0.375454	TGGCGGATTTAACATTCGCG	59.625	50.000	0.00	0.00	46.22	5.87
426	427	1.400494	ACTGGCGGATTTAACATTCGC	59.600	47.619	0.00	12.23	44.80	4.70
427	428	3.126171	TCAACTGGCGGATTTAACATTCG	59.874	43.478	0.00	0.00	0.00	3.34
428	429	4.412207	GTCAACTGGCGGATTTAACATTC	58.588	43.478	0.00	0.00	0.00	2.67
429	430	3.119990	CGTCAACTGGCGGATTTAACATT	60.120	43.478	0.00	0.00	39.84	2.71
430	431	2.418628	CGTCAACTGGCGGATTTAACAT	59.581	45.455	0.00	0.00	39.84	2.71
431	432	1.801771	CGTCAACTGGCGGATTTAACA	59.198	47.619	0.00	0.00	39.84	2.41
432	433	2.520686	CGTCAACTGGCGGATTTAAC	57.479	50.000	0.00	0.00	39.84	2.01
441	442	1.583054	AACTCTTCACGTCAACTGGC	58.417	50.000	0.00	0.00	0.00	4.85
442	443	3.002348	GGAAAACTCTTCACGTCAACTGG	59.998	47.826	0.00	0.00	0.00	4.00
443	444	3.871594	AGGAAAACTCTTCACGTCAACTG	59.128	43.478	0.00	0.00	0.00	3.16
444	445	4.138487	AGGAAAACTCTTCACGTCAACT	57.862	40.909	0.00	0.00	0.00	3.16
445	446	4.877323	AAGGAAAACTCTTCACGTCAAC	57.123	40.909	0.00	0.00	0.00	3.18
446	447	6.285224	TCATAAGGAAAACTCTTCACGTCAA	58.715	36.000	0.00	0.00	0.00	3.18
447	448	5.849510	TCATAAGGAAAACTCTTCACGTCA	58.150	37.500	0.00	0.00	0.00	4.35
448	449	6.969828	ATCATAAGGAAAACTCTTCACGTC	57.030	37.500	0.00	0.00	0.00	4.34
449	450	8.842358	TTTATCATAAGGAAAACTCTTCACGT	57.158	30.769	0.00	0.00	0.00	4.49
450	451	9.543018	GTTTTATCATAAGGAAAACTCTTCACG	57.457	33.333	0.00	0.00	39.10	4.35
478	479	8.483758	GCGGGGGAGATCTTATATTTCTTTATA	58.516	37.037	0.00	0.00	0.00	0.98
479	480	7.037586	TGCGGGGGAGATCTTATATTTCTTTAT	60.038	37.037	0.00	0.00	0.00	1.40
480	481	6.271391	TGCGGGGGAGATCTTATATTTCTTTA	59.729	38.462	0.00	0.00	0.00	1.85
481	482	5.073144	TGCGGGGGAGATCTTATATTTCTTT	59.927	40.000	0.00	0.00	0.00	2.52
482	483	4.597507	TGCGGGGGAGATCTTATATTTCTT	59.402	41.667	0.00	0.00	0.00	2.52
483	484	4.168101	TGCGGGGGAGATCTTATATTTCT	58.832	43.478	0.00	0.00	0.00	2.52
484	485	4.553330	TGCGGGGGAGATCTTATATTTC	57.447	45.455	0.00	0.00	0.00	2.17
485	486	4.993705	TTGCGGGGGAGATCTTATATTT	57.006	40.909	0.00	0.00	0.00	1.40
486	487	4.993705	TTTGCGGGGGAGATCTTATATT	57.006	40.909	0.00	0.00	0.00	1.28
487	488	4.993705	TTTTGCGGGGGAGATCTTATAT	57.006	40.909	0.00	0.00	0.00	0.86
488	489	4.781775	TTTTTGCGGGGGAGATCTTATA	57.218	40.909	0.00	0.00	0.00	0.98
489	490	3.662759	TTTTTGCGGGGGAGATCTTAT	57.337	42.857	0.00	0.00	0.00	1.73
519	520	9.336171	GATTCAGGCAAGTCTAAAAGATCTTAT	57.664	33.333	8.75	0.00	0.00	1.73
520	521	8.543774	AGATTCAGGCAAGTCTAAAAGATCTTA	58.456	33.333	8.75	0.00	0.00	2.10
521	522	7.401246	AGATTCAGGCAAGTCTAAAAGATCTT	58.599	34.615	0.88	0.88	0.00	2.40
522	523	6.956497	AGATTCAGGCAAGTCTAAAAGATCT	58.044	36.000	0.00	0.00	0.00	2.75
523	524	7.622893	AAGATTCAGGCAAGTCTAAAAGATC	57.377	36.000	0.00	0.00	0.00	2.75
533	534	9.988815	CAGTACTTATATAAGATTCAGGCAAGT	57.011	33.333	25.83	6.87	37.08	3.16
537	538	9.509855	CGATCAGTACTTATATAAGATTCAGGC	57.490	37.037	25.83	10.91	37.08	4.85
646	650	2.767960	AGTACTATGTTTACCCACCCCG	59.232	50.000	0.00	0.00	0.00	5.73
698	706	1.216941	CCGTTAACGCCGTCAGTTGT	61.217	55.000	22.43	0.00	38.18	3.32
699	707	0.940519	TCCGTTAACGCCGTCAGTTG	60.941	55.000	22.43	5.68	38.18	3.16
722	730	1.014044	TTTGATGTCGCCAGCTCGTC	61.014	55.000	0.00	0.00	0.00	4.20
753	761	2.065906	AATGTCGCGGCGTTTTTGGT	62.066	50.000	22.90	0.00	0.00	3.67
835	847	0.179029	CCGTCTCCTCTCCTCTCCTC	60.179	65.000	0.00	0.00	0.00	3.71
836	848	1.919771	CCGTCTCCTCTCCTCTCCT	59.080	63.158	0.00	0.00	0.00	3.69
837	849	1.826487	GCCGTCTCCTCTCCTCTCC	60.826	68.421	0.00	0.00	0.00	3.71
838	850	2.184167	CGCCGTCTCCTCTCCTCTC	61.184	68.421	0.00	0.00	0.00	3.20
839	851	2.124487	CGCCGTCTCCTCTCCTCT	60.124	66.667	0.00	0.00	0.00	3.69
896	910	2.202892	GGACGGCAATCGAGGGTC	60.203	66.667	0.00	0.00	42.43	4.46
985	1002	2.746375	CCATTCCCCACCTCCCGAG	61.746	68.421	0.00	0.00	0.00	4.63
994	1011	3.727258	CACGCTCCCCATTCCCCA	61.727	66.667	0.00	0.00	0.00	4.96
1354	1375	4.764823	ACCAAAATTCGAGCACCTATTCAA	59.235	37.500	0.00	0.00	0.00	2.69
1355	1376	4.331968	ACCAAAATTCGAGCACCTATTCA	58.668	39.130	0.00	0.00	0.00	2.57
1379	1400	3.281727	TCTGGGTTGCATAATCTCACC	57.718	47.619	0.00	0.00	0.00	4.02
1391	1412	2.751806	GAGCTCAGGAAAATCTGGGTTG	59.248	50.000	9.40	0.00	37.55	3.77
1514	1537	3.575630	TCTTAACAGCAGCGAGTTACAG	58.424	45.455	11.58	11.76	30.55	2.74
1515	1538	3.653539	TCTTAACAGCAGCGAGTTACA	57.346	42.857	11.58	1.87	30.55	2.41
1516	1539	4.625742	TGAATCTTAACAGCAGCGAGTTAC	59.374	41.667	11.58	3.41	30.55	2.50
1517	1540	4.816392	TGAATCTTAACAGCAGCGAGTTA	58.184	39.130	8.80	8.80	0.00	2.24
1518	1541	3.664107	TGAATCTTAACAGCAGCGAGTT	58.336	40.909	10.53	10.53	0.00	3.01
1571	1594	5.408604	AGAATGAGACGCGACAAAAAGTAAT	59.591	36.000	15.93	0.00	0.00	1.89
1574	1597	3.059597	CAGAATGAGACGCGACAAAAAGT	60.060	43.478	15.93	0.00	39.69	2.66
1575	1598	3.059597	ACAGAATGAGACGCGACAAAAAG	60.060	43.478	15.93	5.31	39.69	2.27
1585	1613	4.153117	CCCTTGAGAAAACAGAATGAGACG	59.847	45.833	0.00	0.00	39.69	4.18
1591	1619	3.399305	AGGGTCCCTTGAGAAAACAGAAT	59.601	43.478	3.85	0.00	0.00	2.40
1617	1645	7.202526	TCAACAACAGATGAAAAAGGACATTC	58.797	34.615	0.00	0.00	0.00	2.67
1625	1653	8.081633	GGTACATGATCAACAACAGATGAAAAA	58.918	33.333	0.00	0.00	0.00	1.94
1651	1679	2.060326	CAAGCATGCAGAAACCACAG	57.940	50.000	21.98	0.00	0.00	3.66
1717	1745	1.709147	ATTTGATCACCTCTGCGCGC	61.709	55.000	27.26	27.26	0.00	6.86
1766	1794	3.054213	TCATCAGATGAATCCAGTGGCAA	60.054	43.478	10.93	0.00	36.11	4.52
1798	1826	3.443925	CCGTCGCTGAGGAGCTCA	61.444	66.667	17.19	0.00	43.77	4.26
1889	1917	0.383949	GCAGCTCACGAAACCCAAAA	59.616	50.000	0.00	0.00	0.00	2.44
1917	1945	4.587306	CCATAATCAAAACACCGACATCG	58.413	43.478	0.00	0.00	39.44	3.84
1924	1952	5.391312	AGAACAGCCATAATCAAAACACC	57.609	39.130	0.00	0.00	0.00	4.16
1952	1980	1.488705	TAACCAGCACCTGACCCCTG	61.489	60.000	0.00	0.00	32.44	4.45
2055	2083	0.626382	ACTCACCTCCTCGAGATCCA	59.374	55.000	15.71	0.00	33.33	3.41
2488	2516	3.963665	GCAGTGTGCAAACAAGAATACA	58.036	40.909	10.29	0.00	44.26	2.29
2554	2582	5.754782	ACCATGTTACATAATTCCAGAGCA	58.245	37.500	0.00	0.00	0.00	4.26
2568	2596	3.824443	AGGTGGCAACTAAACCATGTTAC	59.176	43.478	1.40	0.00	38.46	2.50
2705	2734	1.604147	AAGCATGTTAAAGCCCCGCC	61.604	55.000	0.00	0.00	0.00	6.13
2726	2755	3.133691	GCATATGAAGCATCGGAAGTCA	58.866	45.455	6.97	0.00	0.00	3.41
2842	2871	8.292448	GCAGGGTAAATAACAAGATGATACATG	58.708	37.037	0.00	0.00	0.00	3.21
2903	2932	1.798626	AGATCAGCATAGGACCTGCA	58.201	50.000	3.53	0.00	42.15	4.41
2906	2935	1.967066	CGGAAGATCAGCATAGGACCT	59.033	52.381	0.00	0.00	0.00	3.85
3026	3057	7.933577	TCTGTGAGAATATAACTTGCATTAGGG	59.066	37.037	0.00	0.00	0.00	3.53
3058	3089	2.932614	CGGTAAGCAGAGATTGAGTTGG	59.067	50.000	0.00	0.00	0.00	3.77
3421	3455	8.184192	CCATTTACTAATACTTGGAGTGCTTTG	58.816	37.037	0.00	0.00	0.00	2.77
3553	3588	3.126831	GGAGCAGATTTACCGTCATCTG	58.873	50.000	13.16	13.16	46.39	2.90
3804	3964	6.344500	ACAAAACAGTGCAAAATGTTATCCA	58.656	32.000	12.13	0.00	38.66	3.41
3960	4120	4.228210	AGCCTATTCCTTTCTTCCATCACA	59.772	41.667	0.00	0.00	0.00	3.58
3970	4130	1.936547	CTCACGCAGCCTATTCCTTTC	59.063	52.381	0.00	0.00	0.00	2.62
4030	4190	7.047891	TCCTTAACGCTTGATATCATGTTCTT	58.952	34.615	17.26	10.02	0.00	2.52
4107	4267	4.082125	TCTGGCCATCCTCTTTTTCTTTC	58.918	43.478	5.51	0.00	0.00	2.62
4159	4319	4.009675	TCGTGCAGCCTATTCATTTCTTT	58.990	39.130	0.00	0.00	0.00	2.52
4182	4342	0.109504	TTAACCGGCGAGCATTTTGC	60.110	50.000	9.30	0.00	45.46	3.68
4193	4353	6.916440	TCCTCTTTTTCTTTTATTAACCGGC	58.084	36.000	0.00	0.00	0.00	6.13
4196	4356	7.764443	GGCCATCCTCTTTTTCTTTTATTAACC	59.236	37.037	0.00	0.00	0.00	2.85
4252	4412	8.151141	TCATGCAGCTTATTCATTTCTTCTAG	57.849	34.615	0.00	0.00	0.00	2.43
4254	4414	6.459848	GCTCATGCAGCTTATTCATTTCTTCT	60.460	38.462	9.16	0.00	45.83	2.85
4288	4448	7.206687	TGCTTTGTCTTTATTTCAAACCGATT	58.793	30.769	0.00	0.00	0.00	3.34
4292	4452	8.069574	CCATTTGCTTTGTCTTTATTTCAAACC	58.930	33.333	0.00	0.00	0.00	3.27
4327	4487	7.657336	TCAAATTCTTTAACTTTGGTGGCTAG	58.343	34.615	0.00	0.00	32.15	3.42
4367	4527	7.219484	ACCTCTTCGATTTTCATGTTTGATT	57.781	32.000	0.00	0.00	0.00	2.57
4401	4561	9.513906	TTCCATAACTGTGATTTCTGTTGATAA	57.486	29.630	0.00	0.00	33.10	1.75
4522	4682	4.240888	TCGATGCAGAAGAGTGAGAAAAG	58.759	43.478	0.00	0.00	0.00	2.27
4539	4699	6.808008	AAGCCCTATCATTACAAATCGATG	57.192	37.500	0.00	0.00	0.00	3.84
4629	4789	6.205076	TGCAACAAAGCGTACCTAAATTAGAA	59.795	34.615	0.83	0.00	37.31	2.10
4643	4803	5.080642	TCAAAAATCAATGCAACAAAGCG	57.919	34.783	0.00	0.00	37.31	4.68
4662	4822	6.318628	GTGACCGCACAATTTTATACATCAA	58.681	36.000	0.00	0.00	44.51	2.57
4677	4837	4.153958	TCAAACATAATTGTGACCGCAC	57.846	40.909	9.40	0.00	45.35	5.34
4702	4862	7.062255	GCCTGCACAAATGTAAATAGAAAAGAC	59.938	37.037	0.00	0.00	0.00	3.01
4703	4863	7.039784	AGCCTGCACAAATGTAAATAGAAAAGA	60.040	33.333	0.00	0.00	0.00	2.52
4704	4864	7.092716	AGCCTGCACAAATGTAAATAGAAAAG	58.907	34.615	0.00	0.00	0.00	2.27
4716	4876	2.739913	CAAATTGGAGCCTGCACAAATG	59.260	45.455	0.00	3.60	0.00	2.32
4737	4897	3.430895	CAGCAGCATCAACCAAACATTTC	59.569	43.478	0.00	0.00	0.00	2.17
4826	4986	7.930325	TGTTGAAACAATATTTGAGCAATGGAA	59.070	29.630	0.00	0.00	35.67	3.53
4902	5063	8.418662	ACGACAATACACTCTTATATTGCCTAA	58.581	33.333	0.00	0.00	40.82	2.69
4997	5160	5.726980	TCAATGGGTTTGAAATCAGAAGG	57.273	39.130	0.00	0.00	41.38	3.46
5068	5255	3.327757	TGTACCCTGAGAAGCAAATGAGT	59.672	43.478	0.00	0.00	0.00	3.41
5292	5510	3.616219	ACAAAACTACCAGAACAGCACA	58.384	40.909	0.00	0.00	0.00	4.57
5295	5513	6.373186	AGTAAACAAAACTACCAGAACAGC	57.627	37.500	0.00	0.00	0.00	4.40
5835	6063	5.763204	GGTTCAAAGTTCAGTCAACCTATGA	59.237	40.000	0.00	0.00	35.28	2.15
5990	6279	1.329906	CCAGCAAGATCAACGAGATGC	59.670	52.381	0.00	0.00	37.00	3.91
6269	6562	1.581934	TGAGTGTCTTTGCTTGTCCG	58.418	50.000	0.00	0.00	0.00	4.79
6287	6580	8.036575	ACATCAGGATTTATTTGGACAAACATG	58.963	33.333	0.00	0.00	32.51	3.21
6716	7847	8.345565	GTTTTGATACAGGCTATGAATTGTAGG	58.654	37.037	0.00	0.00	30.39	3.18
6847	8002	8.721478	GCTATTCATGTCTCAGTTTTCTGTAAA	58.279	33.333	0.00	0.00	46.98	2.01
6848	8003	8.097038	AGCTATTCATGTCTCAGTTTTCTGTAA	58.903	33.333	0.00	0.00	46.98	2.41
6917	8137	0.250467	ATCGGCATAATTGGAGCGCT	60.250	50.000	11.27	11.27	0.00	5.92
6918	8138	0.593128	AATCGGCATAATTGGAGCGC	59.407	50.000	0.00	0.00	0.00	5.92
6920	8140	3.141398	TCTGAATCGGCATAATTGGAGC	58.859	45.455	0.00	0.00	0.00	4.70
7331	11570	3.706600	ATTTGGCATGCTTGAACCATT	57.293	38.095	18.92	0.00	30.85	3.16
7423	11662	0.656259	CATCTGCATTCACCTCAGCG	59.344	55.000	0.00	0.00	0.00	5.18
7627	11873	7.406799	ACAATTGATGATTTTTGACGGAAAC	57.593	32.000	13.59	0.00	0.00	2.78
7689	11944	9.208022	CTCATGACAACAAGTATAGACAAAAGA	57.792	33.333	0.00	0.00	0.00	2.52
7783	12039	2.623416	TCGATCTGGCTATTCGTGATGT	59.377	45.455	3.19	0.00	34.60	3.06
7788	12044	2.550606	GAGAGTCGATCTGGCTATTCGT	59.449	50.000	0.00	0.00	38.84	3.85
7803	12059	0.722799	GCGCGCTTTTTGTGAGAGTC	60.723	55.000	26.67	0.00	0.00	3.36
7883	12139	2.069273	CTTGGAGGTGCTACAAAGTCG	58.931	52.381	0.00	0.00	33.52	4.18
7994	12258	8.643324	ACTATCGGCTCTAGTTTGAAAATCTAT	58.357	33.333	0.00	0.00	28.59	1.98
8024	12289	9.790344	ATCCCATTCTCATTAGTATCTTGAAAG	57.210	33.333	0.00	0.00	0.00	2.62
8146	12431	1.847328	TACATCCGAGCAACTGGAGA	58.153	50.000	0.00	0.00	37.76	3.71
8268	12557	2.171725	GCACCGCCCTCGTCATAAC	61.172	63.158	0.00	0.00	0.00	1.89
8271	12604	3.329542	ATTGCACCGCCCTCGTCAT	62.330	57.895	0.00	0.00	0.00	3.06
8280	12613	1.089920	ATCTCTCAACATTGCACCGC	58.910	50.000	0.00	0.00	0.00	5.68
8334	12668	7.771361	TCACCACAGACTAAATACAAAAACTCA	59.229	33.333	0.00	0.00	0.00	3.41
8336	12670	7.254658	CGTCACCACAGACTAAATACAAAAACT	60.255	37.037	0.00	0.00	36.38	2.66
8337	12671	6.849305	CGTCACCACAGACTAAATACAAAAAC	59.151	38.462	0.00	0.00	36.38	2.43
8349	12683	0.759436	AACCCTCGTCACCACAGACT	60.759	55.000	0.00	0.00	36.38	3.24
8391	12725	1.793258	TTTCGACCAATAAACGGCGA	58.207	45.000	16.62	0.00	32.70	5.54
8394	12728	5.933790	TCATTCTTTTCGACCAATAAACGG	58.066	37.500	0.00	0.00	0.00	4.44
8397	12731	8.172352	TCCTTTCATTCTTTTCGACCAATAAA	57.828	30.769	0.00	0.00	0.00	1.40
8402	12736	7.148086	CCAATATCCTTTCATTCTTTTCGACCA	60.148	37.037	0.00	0.00	0.00	4.02
8440	12775	2.635915	ACATCGAAACTGTAACAGGGGA	59.364	45.455	0.00	0.00	35.51	4.81
8499	12853	8.792633	CCATAATTTCTTGTGTAAAGACTGGAA	58.207	33.333	0.00	0.00	0.00	3.53
8501	12855	7.029563	GCCATAATTTCTTGTGTAAAGACTGG	58.970	38.462	0.00	0.00	0.00	4.00
8581	13007	5.991933	ATTTCAGAGCAGTAGTCTTCAGA	57.008	39.130	0.00	0.00	0.00	3.27
8584	13010	8.032451	AGAAGTAATTTCAGAGCAGTAGTCTTC	58.968	37.037	0.00	0.00	38.31	2.87
8619	13082	5.799213	ACTCTTTCTGTTCTTACATCCCTG	58.201	41.667	0.00	0.00	32.86	4.45
8622	13085	5.470098	TGCAACTCTTTCTGTTCTTACATCC	59.530	40.000	0.00	0.00	32.86	3.51
8641	13104	5.491635	AAAGAAACTGAGTTCTCTGCAAC	57.508	39.130	0.00	0.00	36.84	4.17
8695	13172	5.670149	TCACCGCAATACGTTTCTTTTTA	57.330	34.783	0.00	0.00	41.42	1.52
8705	13182	2.695055	CACGCTCACCGCAATACG	59.305	61.111	0.00	0.00	41.76	3.06
8818	13315	9.294614	TGCCATATTAATCAGCAATATGTGTAA	57.705	29.630	11.90	0.00	41.60	2.41
8821	13318	7.094075	ACCTGCCATATTAATCAGCAATATGTG	60.094	37.037	11.90	6.70	41.60	3.21
8823	13320	7.400599	ACCTGCCATATTAATCAGCAATATG	57.599	36.000	7.96	7.71	42.30	1.78
8825	13322	7.233632	AGAACCTGCCATATTAATCAGCAATA	58.766	34.615	7.96	0.00	32.14	1.90
8851	13357	2.264005	TGCATTACACGGTTGGAAGT	57.736	45.000	0.00	0.00	0.00	3.01
8872	13378	0.320508	GATAGGGGCGATTCCGGTTC	60.321	60.000	0.00	0.00	36.06	3.62
8873	13379	1.752833	GATAGGGGCGATTCCGGTT	59.247	57.895	0.00	0.00	36.06	4.44
8874	13380	2.214920	GGATAGGGGCGATTCCGGT	61.215	63.158	0.00	0.00	36.06	5.28
8875	13381	2.214216	TGGATAGGGGCGATTCCGG	61.214	63.158	0.00	0.00	36.06	5.14
8876	13382	1.004918	GTGGATAGGGGCGATTCCG	60.005	63.158	0.00	0.00	39.16	4.30
8877	13383	0.035458	CAGTGGATAGGGGCGATTCC	59.965	60.000	0.00	0.00	0.00	3.01
8915	13421	3.303066	CGTGGGAACGCATGTGTATTATG	60.303	47.826	13.23	1.95	42.37	1.90
8932	13438	7.517734	CGTCAAACATTATTAACTATCCGTGGG	60.518	40.741	0.00	0.00	0.00	4.61
8937	13443	9.417284	CGTTTCGTCAAACATTATTAACTATCC	57.583	33.333	1.31	0.00	41.94	2.59
8940	13446	9.796062	GTTCGTTTCGTCAAACATTATTAACTA	57.204	29.630	1.31	0.00	41.94	2.24
8942	13448	8.478527	TGTTCGTTTCGTCAAACATTATTAAC	57.521	30.769	1.31	0.00	41.94	2.01
8957	13463	7.215568	GGATTGTTATGTACATTGTTCGTTTCG	59.784	37.037	14.77	0.00	36.44	3.46
9002	13513	9.220767	GATTTTAGGTTGCCCTATTCTACATAG	57.779	37.037	0.00	0.00	42.98	2.23
9013	13524	6.127730	CGTCTTATTTGATTTTAGGTTGCCCT	60.128	38.462	0.00	0.00	45.51	5.19
9039	13551	7.382218	GTGAAAGGAACATTTGATTGGTAACTG	59.618	37.037	0.00	0.00	37.61	3.16
9045	13557	4.022416	TCCGTGAAAGGAACATTTGATTGG	60.022	41.667	0.00	0.00	37.36	3.16
9051	13563	4.911390	AGATCTCCGTGAAAGGAACATTT	58.089	39.130	0.00	0.00	40.25	2.32
9064	13576	5.187967	ACTTGATACTTTCCAAGATCTCCGT	59.812	40.000	8.83	0.00	41.56	4.69
9065	13577	5.521735	CACTTGATACTTTCCAAGATCTCCG	59.478	44.000	8.83	0.00	41.56	4.63
9066	13578	6.644347	TCACTTGATACTTTCCAAGATCTCC	58.356	40.000	8.83	0.00	41.56	3.71
9075	13587	8.329203	ACTTCATTCTTCACTTGATACTTTCC	57.671	34.615	0.00	0.00	0.00	3.13
9076	13588	8.447053	GGACTTCATTCTTCACTTGATACTTTC	58.553	37.037	0.00	0.00	0.00	2.62
9118	13630	0.105760	AAACCAAGACACCCATGCCA	60.106	50.000	0.00	0.00	0.00	4.92

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.