Multiple sequence alignment - TraesCS1A01G339900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1A01G339900 | chr1A | 100.000 | 8685 | 0 | 0 | 1 | 8685 | 530218655 | 530209971 | 0.000000e+00 | 16039.0 |
1 | TraesCS1A01G339900 | chr1A | 97.143 | 700 | 15 | 2 | 1 | 700 | 530228861 | 530228167 | 0.000000e+00 | 1177.0 |
2 | TraesCS1A01G339900 | chr1A | 79.014 | 629 | 113 | 13 | 1786 | 2409 | 46236754 | 46237368 | 6.270000e-111 | 412.0 |
3 | TraesCS1A01G339900 | chr1A | 100.000 | 30 | 0 | 0 | 8244 | 8273 | 530210343 | 530210314 | 1.000000e-03 | 56.5 |
4 | TraesCS1A01G339900 | chr1A | 100.000 | 30 | 0 | 0 | 8313 | 8342 | 530210412 | 530210383 | 1.000000e-03 | 56.5 |
5 | TraesCS1A01G339900 | chr1D | 95.059 | 5303 | 177 | 42 | 705 | 5976 | 431814827 | 431809579 | 0.000000e+00 | 8263.0 |
6 | TraesCS1A01G339900 | chr1D | 95.640 | 2179 | 67 | 14 | 6048 | 8210 | 431809580 | 431807414 | 0.000000e+00 | 3472.0 |
7 | TraesCS1A01G339900 | chr1D | 88.579 | 359 | 24 | 10 | 8203 | 8559 | 431806471 | 431806128 | 3.750000e-113 | 420.0 |
8 | TraesCS1A01G339900 | chr1D | 93.827 | 81 | 4 | 1 | 5974 | 6053 | 296361406 | 296361326 | 4.260000e-23 | 121.0 |
9 | TraesCS1A01G339900 | chr1D | 93.671 | 79 | 5 | 0 | 5978 | 6056 | 28960996 | 28960918 | 1.530000e-22 | 119.0 |
10 | TraesCS1A01G339900 | chr1D | 100.000 | 31 | 0 | 0 | 8311 | 8341 | 431806432 | 431806402 | 3.390000e-04 | 58.4 |
11 | TraesCS1A01G339900 | chr1B | 93.470 | 5237 | 220 | 44 | 769 | 5976 | 583092261 | 583087118 | 0.000000e+00 | 7664.0 |
12 | TraesCS1A01G339900 | chr1B | 97.122 | 1251 | 29 | 5 | 6048 | 7293 | 583087119 | 583085871 | 0.000000e+00 | 2104.0 |
13 | TraesCS1A01G339900 | chr1B | 95.283 | 848 | 30 | 7 | 7290 | 8135 | 583085758 | 583084919 | 0.000000e+00 | 1336.0 |
14 | TraesCS1A01G339900 | chr1B | 90.000 | 250 | 12 | 8 | 8311 | 8559 | 583084766 | 583084529 | 2.350000e-80 | 311.0 |
15 | TraesCS1A01G339900 | chr1B | 93.798 | 129 | 7 | 1 | 8146 | 8273 | 583084863 | 583084735 | 8.900000e-45 | 193.0 |
16 | TraesCS1A01G339900 | chr1B | 95.000 | 80 | 4 | 0 | 5974 | 6053 | 397816053 | 397815974 | 9.150000e-25 | 126.0 |
17 | TraesCS1A01G339900 | chr6A | 97.290 | 701 | 17 | 2 | 1 | 700 | 579856452 | 579857151 | 0.000000e+00 | 1188.0 |
18 | TraesCS1A01G339900 | chr6A | 97.678 | 689 | 13 | 3 | 1 | 687 | 17813238 | 17812551 | 0.000000e+00 | 1181.0 |
19 | TraesCS1A01G339900 | chr6A | 97.674 | 688 | 14 | 2 | 1 | 686 | 86355001 | 86355688 | 0.000000e+00 | 1181.0 |
20 | TraesCS1A01G339900 | chr6A | 78.914 | 626 | 113 | 12 | 1789 | 2409 | 608301346 | 608300735 | 2.920000e-109 | 407.0 |
21 | TraesCS1A01G339900 | chr6A | 84.615 | 338 | 42 | 5 | 2746 | 3080 | 607844326 | 607844656 | 2.340000e-85 | 327.0 |
22 | TraesCS1A01G339900 | chr3A | 97.962 | 687 | 11 | 2 | 1 | 686 | 392790077 | 392789393 | 0.000000e+00 | 1188.0 |
23 | TraesCS1A01G339900 | chr3A | 96.862 | 701 | 20 | 2 | 1 | 700 | 625629689 | 625628990 | 0.000000e+00 | 1171.0 |
24 | TraesCS1A01G339900 | chr3A | 83.036 | 336 | 47 | 5 | 2747 | 3080 | 647003812 | 647004139 | 6.590000e-76 | 296.0 |
25 | TraesCS1A01G339900 | chr3A | 82.738 | 336 | 49 | 5 | 2747 | 3080 | 647007166 | 647007494 | 3.070000e-74 | 291.0 |
26 | TraesCS1A01G339900 | chr3A | 81.845 | 336 | 52 | 5 | 2747 | 3080 | 646995310 | 646995638 | 3.090000e-69 | 274.0 |
27 | TraesCS1A01G339900 | chr4A | 97.817 | 687 | 14 | 1 | 1 | 686 | 494628358 | 494629044 | 0.000000e+00 | 1184.0 |
28 | TraesCS1A01G339900 | chr4A | 96.862 | 701 | 19 | 3 | 1 | 700 | 587213196 | 587212498 | 0.000000e+00 | 1170.0 |
29 | TraesCS1A01G339900 | chr2A | 97.817 | 687 | 14 | 1 | 1 | 686 | 703745935 | 703745249 | 0.000000e+00 | 1184.0 |
30 | TraesCS1A01G339900 | chr2A | 87.059 | 85 | 11 | 0 | 2557 | 2641 | 266328930 | 266329014 | 7.180000e-16 | 97.1 |
31 | TraesCS1A01G339900 | chr7B | 85.119 | 336 | 41 | 3 | 2747 | 3080 | 507830211 | 507830539 | 1.400000e-87 | 335.0 |
32 | TraesCS1A01G339900 | chr7B | 86.577 | 149 | 18 | 2 | 2557 | 2703 | 686069986 | 686070134 | 6.980000e-36 | 163.0 |
33 | TraesCS1A01G339900 | chr6B | 85.119 | 336 | 41 | 3 | 2747 | 3080 | 151912610 | 151912938 | 1.400000e-87 | 335.0 |
34 | TraesCS1A01G339900 | chr6B | 87.879 | 165 | 19 | 1 | 2568 | 2731 | 332985072 | 332984908 | 8.900000e-45 | 193.0 |
35 | TraesCS1A01G339900 | chr4B | 85.119 | 336 | 41 | 3 | 2747 | 3080 | 139553090 | 139552762 | 1.400000e-87 | 335.0 |
36 | TraesCS1A01G339900 | chr3B | 88.485 | 165 | 18 | 1 | 2568 | 2731 | 552953310 | 552953146 | 1.910000e-46 | 198.0 |
37 | TraesCS1A01G339900 | chr2B | 86.441 | 177 | 22 | 2 | 2557 | 2731 | 624431029 | 624430853 | 8.900000e-45 | 193.0 |
38 | TraesCS1A01G339900 | chr2B | 92.135 | 89 | 5 | 2 | 5969 | 6056 | 532093908 | 532093821 | 3.290000e-24 | 124.0 |
39 | TraesCS1A01G339900 | chr2D | 94.048 | 84 | 3 | 2 | 5974 | 6056 | 451974404 | 451974322 | 9.150000e-25 | 126.0 |
40 | TraesCS1A01G339900 | chr7D | 95.000 | 80 | 3 | 1 | 5974 | 6052 | 135026247 | 135026326 | 3.290000e-24 | 124.0 |
41 | TraesCS1A01G339900 | chr7A | 92.771 | 83 | 4 | 2 | 5975 | 6056 | 350571866 | 350571785 | 1.530000e-22 | 119.0 |
42 | TraesCS1A01G339900 | chr7A | 93.750 | 80 | 4 | 1 | 5971 | 6050 | 350571789 | 350571867 | 1.530000e-22 | 119.0 |
43 | TraesCS1A01G339900 | chr5B | 89.011 | 91 | 9 | 1 | 5974 | 6063 | 704866435 | 704866525 | 2.560000e-20 | 111.0 |
44 | TraesCS1A01G339900 | chr4D | 87.059 | 85 | 10 | 1 | 2557 | 2641 | 213214248 | 213214331 | 2.580000e-15 | 95.3 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1A01G339900 | chr1A | 530209971 | 530218655 | 8684 | True | 16039.00 | 16039 | 100.0000 | 1 | 8685 | 1 | chr1A.!!$R1 | 8684 |
1 | TraesCS1A01G339900 | chr1A | 530228167 | 530228861 | 694 | True | 1177.00 | 1177 | 97.1430 | 1 | 700 | 1 | chr1A.!!$R2 | 699 |
2 | TraesCS1A01G339900 | chr1A | 46236754 | 46237368 | 614 | False | 412.00 | 412 | 79.0140 | 1786 | 2409 | 1 | chr1A.!!$F1 | 623 |
3 | TraesCS1A01G339900 | chr1D | 431806128 | 431814827 | 8699 | True | 3053.35 | 8263 | 94.8195 | 705 | 8559 | 4 | chr1D.!!$R3 | 7854 |
4 | TraesCS1A01G339900 | chr1B | 583084529 | 583092261 | 7732 | True | 2321.60 | 7664 | 93.9346 | 769 | 8559 | 5 | chr1B.!!$R2 | 7790 |
5 | TraesCS1A01G339900 | chr6A | 579856452 | 579857151 | 699 | False | 1188.00 | 1188 | 97.2900 | 1 | 700 | 1 | chr6A.!!$F2 | 699 |
6 | TraesCS1A01G339900 | chr6A | 17812551 | 17813238 | 687 | True | 1181.00 | 1181 | 97.6780 | 1 | 687 | 1 | chr6A.!!$R1 | 686 |
7 | TraesCS1A01G339900 | chr6A | 86355001 | 86355688 | 687 | False | 1181.00 | 1181 | 97.6740 | 1 | 686 | 1 | chr6A.!!$F1 | 685 |
8 | TraesCS1A01G339900 | chr6A | 608300735 | 608301346 | 611 | True | 407.00 | 407 | 78.9140 | 1789 | 2409 | 1 | chr6A.!!$R2 | 620 |
9 | TraesCS1A01G339900 | chr3A | 392789393 | 392790077 | 684 | True | 1188.00 | 1188 | 97.9620 | 1 | 686 | 1 | chr3A.!!$R1 | 685 |
10 | TraesCS1A01G339900 | chr3A | 625628990 | 625629689 | 699 | True | 1171.00 | 1171 | 96.8620 | 1 | 700 | 1 | chr3A.!!$R2 | 699 |
11 | TraesCS1A01G339900 | chr3A | 647003812 | 647007494 | 3682 | False | 293.50 | 296 | 82.8870 | 2747 | 3080 | 2 | chr3A.!!$F2 | 333 |
12 | TraesCS1A01G339900 | chr4A | 494628358 | 494629044 | 686 | False | 1184.00 | 1184 | 97.8170 | 1 | 686 | 1 | chr4A.!!$F1 | 685 |
13 | TraesCS1A01G339900 | chr4A | 587212498 | 587213196 | 698 | True | 1170.00 | 1170 | 96.8620 | 1 | 700 | 1 | chr4A.!!$R1 | 699 |
14 | TraesCS1A01G339900 | chr2A | 703745249 | 703745935 | 686 | True | 1184.00 | 1184 | 97.8170 | 1 | 686 | 1 | chr2A.!!$R1 | 685 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
944 | 957 | 0.397957 | GAAGTCCTCCTCCTCCTCCC | 60.398 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 | F |
1421 | 1454 | 0.041135 | CTGGCGACGCTAGCTAGTAC | 60.041 | 60.000 | 20.50 | 12.03 | 38.23 | 2.73 | F |
1422 | 1455 | 0.463295 | TGGCGACGCTAGCTAGTACT | 60.463 | 55.000 | 21.62 | 0.00 | 34.52 | 2.73 | F |
1423 | 1456 | 0.041135 | GGCGACGCTAGCTAGTACTG | 60.041 | 60.000 | 21.62 | 11.73 | 34.52 | 2.74 | F |
1424 | 1457 | 0.657951 | GCGACGCTAGCTAGTACTGC | 60.658 | 60.000 | 21.62 | 16.27 | 0.00 | 4.40 | F |
1546 | 1584 | 0.729116 | CCATGCGCTGTCTGTTAAGG | 59.271 | 55.000 | 9.73 | 0.00 | 0.00 | 2.69 | F |
3560 | 6405 | 0.038599 | ACAATGCCAGATGCCTGTCA | 59.961 | 50.000 | 0.00 | 0.00 | 40.16 | 3.58 | F |
3696 | 6543 | 1.888512 | GCTGAAAATGACCAGAAGGCA | 59.111 | 47.619 | 0.00 | 0.00 | 39.06 | 4.75 | F |
4787 | 7643 | 1.279496 | CCCTTCATCAGTCCCAGTGA | 58.721 | 55.000 | 0.00 | 0.00 | 31.21 | 3.41 | F |
5169 | 8025 | 1.396653 | AGCTGGCCATTTCATGCTAC | 58.603 | 50.000 | 12.86 | 0.00 | 0.00 | 3.58 | F |
5414 | 8271 | 2.071540 | CTTCTCAATGAAGCTGCACGA | 58.928 | 47.619 | 0.00 | 0.00 | 44.62 | 4.35 | F |
5992 | 8852 | 0.978907 | GTACTCCCTCCGTCCCAAAA | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2528 | 2578 | 0.732571 | CCCACATGTCACCGTTATGC | 59.267 | 55.000 | 0.00 | 0.00 | 0.00 | 3.14 | R |
3284 | 5791 | 5.023452 | CAGGATAAAGGGCCCTAAAAAGTT | 58.977 | 41.667 | 28.96 | 17.52 | 0.00 | 2.66 | R |
3339 | 5846 | 8.250332 | TGATAATAACAAAACTTCATCAAGCCC | 58.750 | 33.333 | 0.00 | 0.00 | 32.09 | 5.19 | R |
3392 | 6231 | 9.677567 | CAAGAGAATTGAGAACGGAAATTTTAA | 57.322 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 | R |
3445 | 6284 | 9.085645 | TCGGTATAAAATGGACTATGATACACT | 57.914 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 | R |
3696 | 6543 | 5.821470 | CAGCTCATGAGAAATCATACCTTGT | 59.179 | 40.000 | 27.04 | 0.00 | 0.00 | 3.16 | R |
4764 | 7620 | 2.187958 | CTGGGACTGATGAAGGGTACA | 58.812 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 | R |
5787 | 8644 | 1.722034 | AAGGGAGAAGAGTGACAGCA | 58.278 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 | R |
5973 | 8833 | 0.978907 | TTTTGGGACGGAGGGAGTAC | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 | R |
5974 | 8834 | 1.961133 | ATTTTGGGACGGAGGGAGTA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 | R |
7417 | 10397 | 1.732809 | CTGCTGCTGTCTCAACATCTG | 59.267 | 52.381 | 0.00 | 0.00 | 34.13 | 2.90 | R |
7794 | 10774 | 0.457166 | CTCGCCGAACCGTGACAATA | 60.457 | 55.000 | 0.00 | 0.00 | 0.00 | 1.90 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
68 | 70 | 2.098831 | GCGCCCTAGACGGTTGTTC | 61.099 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
160 | 162 | 2.038269 | GCCCCGAGCAATTTGACGA | 61.038 | 57.895 | 14.60 | 0.00 | 42.97 | 4.20 |
423 | 425 | 2.033602 | TCGTCTCCTCGTGCCTCA | 59.966 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
440 | 442 | 3.383825 | GCCTCAGTTATCTCTTACCCGAA | 59.616 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
680 | 687 | 2.152016 | CTCTAGGCGACATCCACGATA | 58.848 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
687 | 694 | 3.311322 | GGCGACATCCACGATATTTCAAA | 59.689 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
688 | 695 | 4.201871 | GGCGACATCCACGATATTTCAAAA | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
689 | 696 | 4.963953 | GCGACATCCACGATATTTCAAAAG | 59.036 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
690 | 697 | 5.501715 | CGACATCCACGATATTTCAAAAGG | 58.498 | 41.667 | 0.00 | 0.00 | 0.00 | 3.11 |
691 | 698 | 5.064707 | CGACATCCACGATATTTCAAAAGGT | 59.935 | 40.000 | 0.00 | 0.00 | 0.00 | 3.50 |
692 | 699 | 6.194796 | ACATCCACGATATTTCAAAAGGTG | 57.805 | 37.500 | 0.00 | 0.00 | 0.00 | 4.00 |
693 | 700 | 5.943416 | ACATCCACGATATTTCAAAAGGTGA | 59.057 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
694 | 701 | 6.603201 | ACATCCACGATATTTCAAAAGGTGAT | 59.397 | 34.615 | 0.00 | 0.00 | 35.70 | 3.06 |
695 | 702 | 6.435430 | TCCACGATATTTCAAAAGGTGATG | 57.565 | 37.500 | 0.00 | 0.00 | 35.70 | 3.07 |
696 | 703 | 6.176896 | TCCACGATATTTCAAAAGGTGATGA | 58.823 | 36.000 | 0.00 | 0.00 | 35.70 | 2.92 |
697 | 704 | 6.316140 | TCCACGATATTTCAAAAGGTGATGAG | 59.684 | 38.462 | 0.00 | 0.00 | 35.70 | 2.90 |
698 | 705 | 6.316140 | CCACGATATTTCAAAAGGTGATGAGA | 59.684 | 38.462 | 0.00 | 0.00 | 35.70 | 3.27 |
699 | 706 | 7.404985 | CACGATATTTCAAAAGGTGATGAGAG | 58.595 | 38.462 | 0.00 | 0.00 | 35.70 | 3.20 |
700 | 707 | 7.278646 | CACGATATTTCAAAAGGTGATGAGAGA | 59.721 | 37.037 | 0.00 | 0.00 | 35.70 | 3.10 |
701 | 708 | 7.824289 | ACGATATTTCAAAAGGTGATGAGAGAA | 59.176 | 33.333 | 0.00 | 0.00 | 35.70 | 2.87 |
702 | 709 | 8.668353 | CGATATTTCAAAAGGTGATGAGAGAAA | 58.332 | 33.333 | 0.00 | 0.00 | 35.70 | 2.52 |
815 | 822 | 0.947180 | TTCACGCCGAAGCAAGGTAC | 60.947 | 55.000 | 0.00 | 0.00 | 39.83 | 3.34 |
915 | 928 | 2.052690 | ACGGCTCGCACCATACTCT | 61.053 | 57.895 | 0.00 | 0.00 | 0.00 | 3.24 |
916 | 929 | 1.299468 | CGGCTCGCACCATACTCTC | 60.299 | 63.158 | 0.00 | 0.00 | 0.00 | 3.20 |
917 | 930 | 1.068250 | GGCTCGCACCATACTCTCC | 59.932 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
918 | 931 | 1.068250 | GCTCGCACCATACTCTCCC | 59.932 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
919 | 932 | 1.395826 | GCTCGCACCATACTCTCCCT | 61.396 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
944 | 957 | 0.397957 | GAAGTCCTCCTCCTCCTCCC | 60.398 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
947 | 960 | 2.015726 | TCCTCCTCCTCCTCCCCTC | 61.016 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
951 | 964 | 3.039526 | CTCCTCCTCCCCTCCCCT | 61.040 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
1208 | 1239 | 2.287915 | CCCTGCGATATCCTTTTGTTCG | 59.712 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1209 | 1240 | 2.936498 | CCTGCGATATCCTTTTGTTCGT | 59.064 | 45.455 | 0.00 | 0.00 | 32.65 | 3.85 |
1216 | 1247 | 5.232414 | CGATATCCTTTTGTTCGTCTTCCTC | 59.768 | 44.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1373 | 1405 | 0.249953 | TGGAGCGCTTTGGTTTCGTA | 60.250 | 50.000 | 13.26 | 0.00 | 0.00 | 3.43 |
1390 | 1423 | 1.268589 | CGTATTCGTGGTGATCTCGCT | 60.269 | 52.381 | 0.00 | 0.00 | 0.00 | 4.93 |
1396 | 1429 | 1.305297 | TGGTGATCTCGCTGGGACT | 60.305 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
1420 | 1453 | 2.318224 | CTGGCGACGCTAGCTAGTA | 58.682 | 57.895 | 20.50 | 0.43 | 38.23 | 1.82 |
1421 | 1454 | 0.041135 | CTGGCGACGCTAGCTAGTAC | 60.041 | 60.000 | 20.50 | 12.03 | 38.23 | 2.73 |
1422 | 1455 | 0.463295 | TGGCGACGCTAGCTAGTACT | 60.463 | 55.000 | 21.62 | 0.00 | 34.52 | 2.73 |
1423 | 1456 | 0.041135 | GGCGACGCTAGCTAGTACTG | 60.041 | 60.000 | 21.62 | 11.73 | 34.52 | 2.74 |
1424 | 1457 | 0.657951 | GCGACGCTAGCTAGTACTGC | 60.658 | 60.000 | 21.62 | 16.27 | 0.00 | 4.40 |
1500 | 1538 | 1.032014 | ACCATGCGATTATTGTGGGC | 58.968 | 50.000 | 0.00 | 0.00 | 34.27 | 5.36 |
1530 | 1568 | 5.220931 | GCGAAATTGTGCTTCTCTAATCCAT | 60.221 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1535 | 1573 | 1.139654 | TGCTTCTCTAATCCATGCGCT | 59.860 | 47.619 | 9.73 | 0.00 | 0.00 | 5.92 |
1536 | 1574 | 1.530293 | GCTTCTCTAATCCATGCGCTG | 59.470 | 52.381 | 9.73 | 4.25 | 0.00 | 5.18 |
1541 | 1579 | 1.482182 | TCTAATCCATGCGCTGTCTGT | 59.518 | 47.619 | 9.73 | 0.00 | 0.00 | 3.41 |
1542 | 1580 | 2.093500 | TCTAATCCATGCGCTGTCTGTT | 60.093 | 45.455 | 9.73 | 0.00 | 0.00 | 3.16 |
1543 | 1581 | 2.401583 | AATCCATGCGCTGTCTGTTA | 57.598 | 45.000 | 9.73 | 0.00 | 0.00 | 2.41 |
1546 | 1584 | 0.729116 | CCATGCGCTGTCTGTTAAGG | 59.271 | 55.000 | 9.73 | 0.00 | 0.00 | 2.69 |
1554 | 1592 | 4.438744 | GCGCTGTCTGTTAAGGCAAATAAT | 60.439 | 41.667 | 0.00 | 0.00 | 37.65 | 1.28 |
1566 | 1604 | 9.830975 | GTTAAGGCAAATAATTTGGATAATGGT | 57.169 | 29.630 | 0.00 | 0.00 | 40.94 | 3.55 |
1581 | 1619 | 5.071250 | GGATAATGGTACCCACAGTATCACA | 59.929 | 44.000 | 10.07 | 0.00 | 44.85 | 3.58 |
1583 | 1621 | 5.450818 | AATGGTACCCACAGTATCACATT | 57.549 | 39.130 | 10.07 | 0.00 | 44.85 | 2.71 |
1590 | 1628 | 4.287067 | ACCCACAGTATCACATTCTGAGTT | 59.713 | 41.667 | 0.00 | 0.00 | 32.70 | 3.01 |
1643 | 1683 | 3.459227 | TGTGGGAGCCTTGATGAATGATA | 59.541 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
1766 | 1806 | 7.439955 | CAGTGTAGGGGTTTAATTTTGGTTTTC | 59.560 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
1769 | 1809 | 7.565768 | TGTAGGGGTTTAATTTTGGTTTTCTCT | 59.434 | 33.333 | 0.00 | 0.00 | 0.00 | 3.10 |
1815 | 1857 | 8.149973 | TGTTATTGTTCTGAAGTGTTTACCTC | 57.850 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
1833 | 1875 | 5.622770 | ACCTCGGTTAAAATCACATTGTC | 57.377 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
1848 | 1890 | 7.857734 | TCACATTGTCTTGTCTCAACTTTAA | 57.142 | 32.000 | 0.00 | 0.00 | 0.00 | 1.52 |
1850 | 1892 | 7.768582 | TCACATTGTCTTGTCTCAACTTTAAGA | 59.231 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
1851 | 1893 | 8.066595 | CACATTGTCTTGTCTCAACTTTAAGAG | 58.933 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
2499 | 2549 | 6.974932 | TTAGATTGAGAATGTCTGCAGTTC | 57.025 | 37.500 | 14.67 | 10.45 | 0.00 | 3.01 |
2500 | 2550 | 4.903054 | AGATTGAGAATGTCTGCAGTTCA | 58.097 | 39.130 | 14.67 | 14.44 | 0.00 | 3.18 |
2501 | 2551 | 5.498393 | AGATTGAGAATGTCTGCAGTTCAT | 58.502 | 37.500 | 14.67 | 16.00 | 0.00 | 2.57 |
2528 | 2578 | 1.280746 | CTGCTTCCACTTGTGTGCG | 59.719 | 57.895 | 0.00 | 0.00 | 42.54 | 5.34 |
2769 | 2819 | 7.334421 | ACTTATATGTTGTTACCAGCAGTTCTG | 59.666 | 37.037 | 0.00 | 0.00 | 42.49 | 3.02 |
3009 | 4761 | 5.576774 | TCATGTTGTCAGCAAGTAAGTATCG | 59.423 | 40.000 | 0.00 | 0.00 | 34.94 | 2.92 |
3016 | 4768 | 4.219944 | TCAGCAAGTAAGTATCGTTCCTGT | 59.780 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
3258 | 5765 | 6.094048 | ACATTTGTGTTGTGCCTATCATCTAC | 59.906 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
3259 | 5766 | 4.817318 | TGTGTTGTGCCTATCATCTACA | 57.183 | 40.909 | 0.00 | 0.00 | 0.00 | 2.74 |
3260 | 5767 | 4.758688 | TGTGTTGTGCCTATCATCTACAG | 58.241 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
3261 | 5768 | 4.222810 | TGTGTTGTGCCTATCATCTACAGT | 59.777 | 41.667 | 0.00 | 0.00 | 0.00 | 3.55 |
3262 | 5769 | 5.420739 | TGTGTTGTGCCTATCATCTACAGTA | 59.579 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3310 | 5817 | 6.068438 | ACTTTTTAGGGCCCTTTATCCTGTAT | 60.068 | 38.462 | 34.04 | 2.60 | 32.46 | 2.29 |
3469 | 6308 | 9.998106 | ACAGTGTATCATAGTCCATTTTATACC | 57.002 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
3560 | 6405 | 0.038599 | ACAATGCCAGATGCCTGTCA | 59.961 | 50.000 | 0.00 | 0.00 | 40.16 | 3.58 |
3696 | 6543 | 1.888512 | GCTGAAAATGACCAGAAGGCA | 59.111 | 47.619 | 0.00 | 0.00 | 39.06 | 4.75 |
3704 | 6551 | 1.985159 | TGACCAGAAGGCACAAGGTAT | 59.015 | 47.619 | 0.00 | 0.00 | 39.06 | 2.73 |
3708 | 6555 | 3.010584 | ACCAGAAGGCACAAGGTATGATT | 59.989 | 43.478 | 0.00 | 0.00 | 39.06 | 2.57 |
3861 | 6711 | 3.983044 | AGGTGGGTTCTGTTGACTATC | 57.017 | 47.619 | 0.00 | 0.00 | 0.00 | 2.08 |
3951 | 6804 | 7.364200 | AGCTTGCGATTATCACTAGTTACTAG | 58.636 | 38.462 | 16.96 | 16.96 | 39.72 | 2.57 |
4047 | 6900 | 2.874701 | GTTCTGAAGTGTGTGCTGTGAT | 59.125 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
4594 | 7450 | 1.955778 | TGTTGCCTGATGACAAACTGG | 59.044 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
4745 | 7601 | 7.346751 | TGAGGCCTTTGATTATTGGAATTAC | 57.653 | 36.000 | 6.77 | 0.00 | 0.00 | 1.89 |
4764 | 7620 | 1.903860 | ACATTGGTTGCCATGCATCTT | 59.096 | 42.857 | 0.00 | 0.00 | 38.76 | 2.40 |
4778 | 7634 | 3.877559 | TGCATCTTGTACCCTTCATCAG | 58.122 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
4782 | 7638 | 2.838202 | TCTTGTACCCTTCATCAGTCCC | 59.162 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
4787 | 7643 | 1.279496 | CCCTTCATCAGTCCCAGTGA | 58.721 | 55.000 | 0.00 | 0.00 | 31.21 | 3.41 |
4788 | 7644 | 1.842562 | CCCTTCATCAGTCCCAGTGAT | 59.157 | 52.381 | 0.00 | 0.00 | 38.74 | 3.06 |
4882 | 7738 | 8.543774 | AGATGACTACACCATATTCTCTTTTGT | 58.456 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
5107 | 7963 | 7.213216 | TCTTTGCAAAGTAATATTGTCTGCA | 57.787 | 32.000 | 32.46 | 10.58 | 37.31 | 4.41 |
5125 | 7981 | 8.224389 | TGTCTGCAGCATTTGTGTTATTATAT | 57.776 | 30.769 | 9.47 | 0.00 | 0.00 | 0.86 |
5129 | 7985 | 8.854979 | TGCAGCATTTGTGTTATTATATCAAC | 57.145 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
5169 | 8025 | 1.396653 | AGCTGGCCATTTCATGCTAC | 58.603 | 50.000 | 12.86 | 0.00 | 0.00 | 3.58 |
5172 | 8028 | 2.646930 | CTGGCCATTTCATGCTACTGA | 58.353 | 47.619 | 5.51 | 0.00 | 0.00 | 3.41 |
5306 | 8163 | 8.921205 | GGACATTTTAGTATGACTAACTAGGGA | 58.079 | 37.037 | 0.00 | 0.00 | 40.12 | 4.20 |
5328 | 8185 | 5.188751 | GGATTTGTGGGATGTGGGAAATTTA | 59.811 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5338 | 8195 | 8.960591 | GGGATGTGGGAAATTTATCAGTATATG | 58.039 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
5414 | 8271 | 2.071540 | CTTCTCAATGAAGCTGCACGA | 58.928 | 47.619 | 0.00 | 0.00 | 44.62 | 4.35 |
5721 | 8578 | 4.295905 | TCTTGGGGTATTCCTGGAGTAT | 57.704 | 45.455 | 2.01 | 0.00 | 35.33 | 2.12 |
5866 | 8725 | 6.963049 | TCATTAGCGAGTTTAGAAGGAAAC | 57.037 | 37.500 | 0.00 | 0.00 | 39.22 | 2.78 |
5904 | 8764 | 9.851686 | TCAGGCAATATAAGACTTGATATTTGT | 57.148 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
5974 | 8834 | 7.667043 | TCTTTTAATGATGAGCTTAACACGT | 57.333 | 32.000 | 0.00 | 0.00 | 0.00 | 4.49 |
5975 | 8835 | 8.766000 | TCTTTTAATGATGAGCTTAACACGTA | 57.234 | 30.769 | 0.00 | 0.00 | 0.00 | 3.57 |
5976 | 8836 | 8.653338 | TCTTTTAATGATGAGCTTAACACGTAC | 58.347 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
5977 | 8837 | 8.542497 | TTTTAATGATGAGCTTAACACGTACT | 57.458 | 30.769 | 0.00 | 0.00 | 0.00 | 2.73 |
5978 | 8838 | 7.751047 | TTAATGATGAGCTTAACACGTACTC | 57.249 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
5979 | 8839 | 4.106029 | TGATGAGCTTAACACGTACTCC | 57.894 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
5980 | 8840 | 3.119245 | TGATGAGCTTAACACGTACTCCC | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
5981 | 8841 | 2.522185 | TGAGCTTAACACGTACTCCCT | 58.478 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
5982 | 8842 | 2.490903 | TGAGCTTAACACGTACTCCCTC | 59.509 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5983 | 8843 | 1.823610 | AGCTTAACACGTACTCCCTCC | 59.176 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
5984 | 8844 | 1.468736 | GCTTAACACGTACTCCCTCCG | 60.469 | 57.143 | 0.00 | 0.00 | 0.00 | 4.63 |
5985 | 8845 | 1.815003 | CTTAACACGTACTCCCTCCGT | 59.185 | 52.381 | 0.00 | 0.00 | 34.71 | 4.69 |
5986 | 8846 | 1.453155 | TAACACGTACTCCCTCCGTC | 58.547 | 55.000 | 0.00 | 0.00 | 31.46 | 4.79 |
5987 | 8847 | 1.246737 | AACACGTACTCCCTCCGTCC | 61.247 | 60.000 | 0.00 | 0.00 | 31.46 | 4.79 |
5988 | 8848 | 2.044551 | ACGTACTCCCTCCGTCCC | 60.045 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
5989 | 8849 | 2.044650 | CGTACTCCCTCCGTCCCA | 60.045 | 66.667 | 0.00 | 0.00 | 0.00 | 4.37 |
5990 | 8850 | 1.679977 | CGTACTCCCTCCGTCCCAA | 60.680 | 63.158 | 0.00 | 0.00 | 0.00 | 4.12 |
5991 | 8851 | 1.252904 | CGTACTCCCTCCGTCCCAAA | 61.253 | 60.000 | 0.00 | 0.00 | 0.00 | 3.28 |
5992 | 8852 | 0.978907 | GTACTCCCTCCGTCCCAAAA | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
5993 | 8853 | 1.558294 | GTACTCCCTCCGTCCCAAAAT | 59.442 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
5994 | 8854 | 1.961133 | ACTCCCTCCGTCCCAAAATA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5995 | 8855 | 2.271777 | ACTCCCTCCGTCCCAAAATAA | 58.728 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
5996 | 8856 | 2.238898 | ACTCCCTCCGTCCCAAAATAAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
5997 | 8857 | 2.238898 | CTCCCTCCGTCCCAAAATAAGT | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5998 | 8858 | 2.026636 | TCCCTCCGTCCCAAAATAAGTG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5999 | 8859 | 2.290705 | CCCTCCGTCCCAAAATAAGTGT | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
6000 | 8860 | 3.007635 | CCTCCGTCCCAAAATAAGTGTC | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
6001 | 8861 | 3.307480 | CCTCCGTCCCAAAATAAGTGTCT | 60.307 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
6002 | 8862 | 3.933332 | CTCCGTCCCAAAATAAGTGTCTC | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
6003 | 8863 | 3.325425 | TCCGTCCCAAAATAAGTGTCTCA | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
6004 | 8864 | 4.069304 | CCGTCCCAAAATAAGTGTCTCAA | 58.931 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
6005 | 8865 | 4.700213 | CCGTCCCAAAATAAGTGTCTCAAT | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
6006 | 8866 | 5.878116 | CCGTCCCAAAATAAGTGTCTCAATA | 59.122 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
6007 | 8867 | 6.542370 | CCGTCCCAAAATAAGTGTCTCAATAT | 59.458 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
6008 | 8868 | 7.067008 | CCGTCCCAAAATAAGTGTCTCAATATT | 59.933 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
6009 | 8869 | 9.104965 | CGTCCCAAAATAAGTGTCTCAATATTA | 57.895 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
6035 | 8895 | 9.391006 | AGTACAAAGTTGAGACACTTATTTTGA | 57.609 | 29.630 | 0.00 | 0.00 | 35.87 | 2.69 |
6036 | 8896 | 9.651718 | GTACAAAGTTGAGACACTTATTTTGAG | 57.348 | 33.333 | 0.00 | 0.00 | 35.87 | 3.02 |
6037 | 8897 | 8.506168 | ACAAAGTTGAGACACTTATTTTGAGA | 57.494 | 30.769 | 0.00 | 0.00 | 35.87 | 3.27 |
6038 | 8898 | 8.398665 | ACAAAGTTGAGACACTTATTTTGAGAC | 58.601 | 33.333 | 0.00 | 0.00 | 35.87 | 3.36 |
6039 | 8899 | 6.771188 | AGTTGAGACACTTATTTTGAGACG | 57.229 | 37.500 | 0.00 | 0.00 | 0.00 | 4.18 |
6040 | 8900 | 5.696724 | AGTTGAGACACTTATTTTGAGACGG | 59.303 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
6041 | 8901 | 5.462530 | TGAGACACTTATTTTGAGACGGA | 57.537 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
6042 | 8902 | 5.470368 | TGAGACACTTATTTTGAGACGGAG | 58.530 | 41.667 | 0.00 | 0.00 | 0.00 | 4.63 |
6043 | 8903 | 4.822026 | AGACACTTATTTTGAGACGGAGG | 58.178 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
6044 | 8904 | 3.933332 | GACACTTATTTTGAGACGGAGGG | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
6045 | 8905 | 3.581332 | ACACTTATTTTGAGACGGAGGGA | 59.419 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
6046 | 8906 | 4.184629 | CACTTATTTTGAGACGGAGGGAG | 58.815 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
6063 | 8923 | 9.503399 | ACGGAGGGAGTATATGATTTTAAAATC | 57.497 | 33.333 | 27.02 | 27.02 | 43.91 | 2.17 |
6285 | 9146 | 2.814097 | GCAAGGTTCTGCTGGAAGGTAA | 60.814 | 50.000 | 0.00 | 0.00 | 39.34 | 2.85 |
6294 | 9155 | 4.707448 | TCTGCTGGAAGGTAAAGTCTCTAG | 59.293 | 45.833 | 0.00 | 0.00 | 0.00 | 2.43 |
6306 | 9167 | 7.397476 | AGGTAAAGTCTCTAGAACACATCATCA | 59.603 | 37.037 | 0.00 | 0.00 | 0.00 | 3.07 |
6485 | 9346 | 1.740025 | GGGCCGCATATCTCTAATTGC | 59.260 | 52.381 | 0.00 | 0.00 | 0.00 | 3.56 |
6495 | 9356 | 6.238484 | GCATATCTCTAATTGCGGTTTTCACT | 60.238 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
6788 | 9649 | 7.687941 | AATTCTTGACGACATTGAAAGGTAT | 57.312 | 32.000 | 7.57 | 0.00 | 0.00 | 2.73 |
6813 | 9674 | 4.469657 | AGAACCTCAATGCCACAAAAGTA | 58.530 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
6838 | 9699 | 5.754406 | TGCTGTCATTTGTCCTTTCATTTTG | 59.246 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
7026 | 9890 | 3.378339 | CAGTCTTTTCTTGGCTGCAAAG | 58.622 | 45.455 | 10.60 | 10.60 | 0.00 | 2.77 |
7030 | 9894 | 3.638160 | TCTTTTCTTGGCTGCAAAGACAT | 59.362 | 39.130 | 18.78 | 0.00 | 33.46 | 3.06 |
7083 | 9947 | 1.135721 | CTTGCCTATCTTTTGCAGGGC | 59.864 | 52.381 | 0.00 | 0.00 | 39.93 | 5.19 |
7218 | 10083 | 7.320443 | TGCTGCAAAGGTAAGATAATTACTG | 57.680 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
7266 | 10131 | 2.989422 | ATGCAAGAAACTGTAACCGC | 57.011 | 45.000 | 0.00 | 0.00 | 0.00 | 5.68 |
7338 | 10318 | 8.321353 | TCTGTAATACATATTCTATGGCCTTGG | 58.679 | 37.037 | 3.32 | 0.00 | 0.00 | 3.61 |
7339 | 10319 | 7.984475 | TGTAATACATATTCTATGGCCTTGGT | 58.016 | 34.615 | 3.32 | 0.00 | 0.00 | 3.67 |
7377 | 10357 | 5.606749 | ACTCTGTATCAACCTTATATGGCCA | 59.393 | 40.000 | 8.56 | 8.56 | 0.00 | 5.36 |
7417 | 10397 | 5.675778 | CATTTGAATGTGTTCGATGAAGC | 57.324 | 39.130 | 0.00 | 0.00 | 37.15 | 3.86 |
7606 | 10586 | 4.659172 | CCACAAGGGGGAAGCGCA | 62.659 | 66.667 | 11.47 | 0.00 | 0.00 | 6.09 |
7697 | 10677 | 4.099419 | TCCGCTACTGATCACACATACATT | 59.901 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
7794 | 10774 | 0.404040 | TTGATCCCGAGTGGCCTTTT | 59.596 | 50.000 | 3.32 | 0.00 | 0.00 | 2.27 |
7820 | 10800 | 2.372690 | CGGTTCGGCGAGAGTTGTG | 61.373 | 63.158 | 10.46 | 0.00 | 0.00 | 3.33 |
7892 | 10872 | 3.634910 | GGGCTTGTTTTGTTTGAGACCTA | 59.365 | 43.478 | 0.00 | 0.00 | 32.59 | 3.08 |
7902 | 10882 | 4.208686 | GAGACCTAGGCGCCGTGG | 62.209 | 72.222 | 30.24 | 30.24 | 0.00 | 4.94 |
8055 | 11041 | 2.739913 | TCGGACAGTTAATTTCTTGCCG | 59.260 | 45.455 | 0.00 | 0.00 | 37.70 | 5.69 |
8102 | 11090 | 2.483877 | TGCCTGCTTGTTTATTCTGACG | 59.516 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
8136 | 11124 | 5.465532 | ACATTGCATGTTTGTTGATACCA | 57.534 | 34.783 | 0.00 | 0.00 | 41.63 | 3.25 |
8154 | 11187 | 2.734079 | ACCACAAACAAACAAAAGTGCG | 59.266 | 40.909 | 0.00 | 0.00 | 0.00 | 5.34 |
8179 | 11212 | 4.777366 | TGTTCAGGATTCAGACCACATCTA | 59.223 | 41.667 | 0.00 | 0.00 | 35.15 | 1.98 |
8272 | 12256 | 2.810852 | GGATTTGCTTCCGATCTCCATC | 59.189 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
8278 | 12262 | 2.862921 | GCTTCCGATCTCCATCCGTAAC | 60.863 | 54.545 | 0.00 | 0.00 | 0.00 | 2.50 |
8280 | 12264 | 1.954382 | TCCGATCTCCATCCGTAACAG | 59.046 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
8281 | 12265 | 1.603172 | CCGATCTCCATCCGTAACAGC | 60.603 | 57.143 | 0.00 | 0.00 | 0.00 | 4.40 |
8319 | 12303 | 2.162681 | CCACAGGTCCTCAAATTCCAC | 58.837 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
8361 | 12345 | 0.657840 | AGCATGTAATCGGAAAGCGC | 59.342 | 50.000 | 0.00 | 0.00 | 0.00 | 5.92 |
8364 | 12348 | 0.928229 | ATGTAATCGGAAAGCGCGTC | 59.072 | 50.000 | 8.43 | 3.24 | 0.00 | 5.19 |
8386 | 12370 | 2.851195 | AGAGCTTCCACATTTCAACGT | 58.149 | 42.857 | 0.00 | 0.00 | 0.00 | 3.99 |
8388 | 12372 | 3.632145 | AGAGCTTCCACATTTCAACGTTT | 59.368 | 39.130 | 0.00 | 0.00 | 0.00 | 3.60 |
8468 | 12454 | 5.700832 | TCGGTTGATTCTGTATCCAATATGC | 59.299 | 40.000 | 0.00 | 0.00 | 31.87 | 3.14 |
8479 | 12465 | 4.552166 | ATCCAATATGCGTGCAAGTTAC | 57.448 | 40.909 | 0.00 | 0.00 | 0.00 | 2.50 |
8480 | 12466 | 3.605634 | TCCAATATGCGTGCAAGTTACT | 58.394 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
8481 | 12467 | 3.621268 | TCCAATATGCGTGCAAGTTACTC | 59.379 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
8482 | 12468 | 3.242739 | CCAATATGCGTGCAAGTTACTCC | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
8487 | 12473 | 2.224090 | TGCGTGCAAGTTACTCCTGTTA | 60.224 | 45.455 | 0.59 | 0.00 | 0.00 | 2.41 |
8499 | 12485 | 7.793036 | AGTTACTCCTGTTATAATTCTGTCCC | 58.207 | 38.462 | 0.00 | 0.00 | 0.00 | 4.46 |
8500 | 12486 | 5.632034 | ACTCCTGTTATAATTCTGTCCCC | 57.368 | 43.478 | 0.00 | 0.00 | 0.00 | 4.81 |
8501 | 12487 | 5.289510 | ACTCCTGTTATAATTCTGTCCCCT | 58.710 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
8502 | 12488 | 5.131142 | ACTCCTGTTATAATTCTGTCCCCTG | 59.869 | 44.000 | 0.00 | 0.00 | 0.00 | 4.45 |
8504 | 12490 | 5.491078 | TCCTGTTATAATTCTGTCCCCTGTT | 59.509 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
8505 | 12491 | 6.674861 | TCCTGTTATAATTCTGTCCCCTGTTA | 59.325 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
8506 | 12492 | 7.349859 | TCCTGTTATAATTCTGTCCCCTGTTAT | 59.650 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
8532 | 12518 | 4.991776 | TGGACCTGTAATTTGTGGATTGA | 58.008 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
8594 | 12580 | 4.957759 | AGTTAAACATGTGTAATCCGGC | 57.042 | 40.909 | 11.64 | 0.00 | 0.00 | 6.13 |
8595 | 12581 | 4.328536 | AGTTAAACATGTGTAATCCGGCA | 58.671 | 39.130 | 11.64 | 0.00 | 0.00 | 5.69 |
8596 | 12582 | 4.947388 | AGTTAAACATGTGTAATCCGGCAT | 59.053 | 37.500 | 11.64 | 0.00 | 0.00 | 4.40 |
8597 | 12583 | 6.116806 | AGTTAAACATGTGTAATCCGGCATA | 58.883 | 36.000 | 11.64 | 0.00 | 0.00 | 3.14 |
8598 | 12584 | 6.770785 | AGTTAAACATGTGTAATCCGGCATAT | 59.229 | 34.615 | 11.64 | 0.00 | 0.00 | 1.78 |
8599 | 12585 | 7.934665 | AGTTAAACATGTGTAATCCGGCATATA | 59.065 | 33.333 | 11.64 | 0.00 | 0.00 | 0.86 |
8600 | 12586 | 6.801539 | AAACATGTGTAATCCGGCATATAG | 57.198 | 37.500 | 0.00 | 0.00 | 0.00 | 1.31 |
8601 | 12587 | 5.483685 | ACATGTGTAATCCGGCATATAGT | 57.516 | 39.130 | 0.00 | 0.00 | 0.00 | 2.12 |
8602 | 12588 | 5.237815 | ACATGTGTAATCCGGCATATAGTG | 58.762 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
8603 | 12589 | 5.011635 | ACATGTGTAATCCGGCATATAGTGA | 59.988 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
8604 | 12590 | 5.538849 | TGTGTAATCCGGCATATAGTGAA | 57.461 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
8605 | 12591 | 5.294356 | TGTGTAATCCGGCATATAGTGAAC | 58.706 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
8606 | 12592 | 5.163395 | TGTGTAATCCGGCATATAGTGAACA | 60.163 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
8607 | 12593 | 5.176958 | GTGTAATCCGGCATATAGTGAACAC | 59.823 | 44.000 | 0.00 | 0.00 | 0.00 | 3.32 |
8608 | 12594 | 4.415881 | AATCCGGCATATAGTGAACACA | 57.584 | 40.909 | 0.00 | 0.00 | 0.00 | 3.72 |
8609 | 12595 | 4.623932 | ATCCGGCATATAGTGAACACAT | 57.376 | 40.909 | 0.00 | 2.37 | 0.00 | 3.21 |
8610 | 12596 | 3.727726 | TCCGGCATATAGTGAACACATG | 58.272 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
8611 | 12597 | 3.133901 | TCCGGCATATAGTGAACACATGT | 59.866 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
8612 | 12598 | 3.494626 | CCGGCATATAGTGAACACATGTC | 59.505 | 47.826 | 0.00 | 3.58 | 0.00 | 3.06 |
8613 | 12599 | 4.119136 | CGGCATATAGTGAACACATGTCA | 58.881 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
8614 | 12600 | 4.025730 | CGGCATATAGTGAACACATGTCAC | 60.026 | 45.833 | 7.84 | 7.84 | 34.84 | 3.67 |
8615 | 12601 | 4.025730 | GGCATATAGTGAACACATGTCACG | 60.026 | 45.833 | 9.71 | 0.00 | 39.18 | 4.35 |
8616 | 12602 | 4.803613 | GCATATAGTGAACACATGTCACGA | 59.196 | 41.667 | 9.71 | 6.09 | 39.18 | 4.35 |
8617 | 12603 | 5.051441 | GCATATAGTGAACACATGTCACGAG | 60.051 | 44.000 | 9.71 | 0.00 | 39.18 | 4.18 |
8618 | 12604 | 4.783764 | ATAGTGAACACATGTCACGAGA | 57.216 | 40.909 | 9.71 | 2.15 | 39.18 | 4.04 |
8619 | 12605 | 3.018598 | AGTGAACACATGTCACGAGAG | 57.981 | 47.619 | 9.71 | 0.00 | 39.18 | 3.20 |
8620 | 12606 | 2.623416 | AGTGAACACATGTCACGAGAGA | 59.377 | 45.455 | 9.71 | 0.00 | 39.18 | 3.10 |
8621 | 12607 | 3.068165 | AGTGAACACATGTCACGAGAGAA | 59.932 | 43.478 | 9.71 | 0.00 | 39.18 | 2.87 |
8622 | 12608 | 3.802139 | GTGAACACATGTCACGAGAGAAA | 59.198 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
8623 | 12609 | 3.802139 | TGAACACATGTCACGAGAGAAAC | 59.198 | 43.478 | 0.00 | 0.00 | 0.00 | 2.78 |
8624 | 12610 | 3.452755 | ACACATGTCACGAGAGAAACA | 57.547 | 42.857 | 0.00 | 0.00 | 34.65 | 2.83 |
8625 | 12611 | 3.123804 | ACACATGTCACGAGAGAAACAC | 58.876 | 45.455 | 0.00 | 0.00 | 33.44 | 3.32 |
8626 | 12612 | 3.123050 | CACATGTCACGAGAGAAACACA | 58.877 | 45.455 | 0.00 | 0.00 | 33.44 | 3.72 |
8627 | 12613 | 3.555547 | CACATGTCACGAGAGAAACACAA | 59.444 | 43.478 | 0.00 | 0.00 | 33.44 | 3.33 |
8628 | 12614 | 4.033932 | CACATGTCACGAGAGAAACACAAA | 59.966 | 41.667 | 0.00 | 0.00 | 33.44 | 2.83 |
8629 | 12615 | 4.816385 | ACATGTCACGAGAGAAACACAAAT | 59.184 | 37.500 | 0.00 | 0.00 | 33.44 | 2.32 |
8630 | 12616 | 5.296780 | ACATGTCACGAGAGAAACACAAATT | 59.703 | 36.000 | 0.00 | 0.00 | 33.44 | 1.82 |
8631 | 12617 | 5.403897 | TGTCACGAGAGAAACACAAATTC | 57.596 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
8632 | 12618 | 4.026062 | TGTCACGAGAGAAACACAAATTCG | 60.026 | 41.667 | 0.00 | 0.00 | 32.04 | 3.34 |
8633 | 12619 | 4.208460 | GTCACGAGAGAAACACAAATTCGA | 59.792 | 41.667 | 0.00 | 0.00 | 32.04 | 3.71 |
8634 | 12620 | 4.806775 | TCACGAGAGAAACACAAATTCGAA | 59.193 | 37.500 | 0.00 | 0.00 | 32.04 | 3.71 |
8635 | 12621 | 4.898488 | CACGAGAGAAACACAAATTCGAAC | 59.102 | 41.667 | 0.00 | 0.00 | 32.04 | 3.95 |
8636 | 12622 | 4.134546 | CGAGAGAAACACAAATTCGAACG | 58.865 | 43.478 | 0.00 | 0.00 | 32.04 | 3.95 |
8637 | 12623 | 4.317839 | CGAGAGAAACACAAATTCGAACGT | 60.318 | 41.667 | 0.00 | 0.00 | 32.04 | 3.99 |
8638 | 12624 | 5.079397 | AGAGAAACACAAATTCGAACGTC | 57.921 | 39.130 | 0.00 | 0.00 | 32.04 | 4.34 |
8639 | 12625 | 4.025145 | AGAGAAACACAAATTCGAACGTCC | 60.025 | 41.667 | 0.00 | 0.00 | 32.04 | 4.79 |
8640 | 12626 | 3.623960 | AGAAACACAAATTCGAACGTCCA | 59.376 | 39.130 | 0.00 | 0.00 | 32.04 | 4.02 |
8641 | 12627 | 4.274950 | AGAAACACAAATTCGAACGTCCAT | 59.725 | 37.500 | 0.00 | 0.00 | 32.04 | 3.41 |
8642 | 12628 | 3.536158 | ACACAAATTCGAACGTCCATG | 57.464 | 42.857 | 0.00 | 0.00 | 0.00 | 3.66 |
8643 | 12629 | 2.225491 | ACACAAATTCGAACGTCCATGG | 59.775 | 45.455 | 4.97 | 4.97 | 0.00 | 3.66 |
8644 | 12630 | 1.199097 | ACAAATTCGAACGTCCATGGC | 59.801 | 47.619 | 6.96 | 0.96 | 0.00 | 4.40 |
8645 | 12631 | 1.198867 | CAAATTCGAACGTCCATGGCA | 59.801 | 47.619 | 6.96 | 0.00 | 0.00 | 4.92 |
8646 | 12632 | 1.529226 | AATTCGAACGTCCATGGCAA | 58.471 | 45.000 | 6.96 | 0.00 | 0.00 | 4.52 |
8647 | 12633 | 1.086696 | ATTCGAACGTCCATGGCAAG | 58.913 | 50.000 | 6.96 | 2.96 | 0.00 | 4.01 |
8648 | 12634 | 0.953471 | TTCGAACGTCCATGGCAAGG | 60.953 | 55.000 | 6.96 | 1.41 | 0.00 | 3.61 |
8649 | 12635 | 2.398554 | CGAACGTCCATGGCAAGGG | 61.399 | 63.158 | 6.96 | 5.53 | 0.00 | 3.95 |
8650 | 12636 | 1.303317 | GAACGTCCATGGCAAGGGT | 60.303 | 57.895 | 6.96 | 0.00 | 0.00 | 4.34 |
8651 | 12637 | 1.586154 | GAACGTCCATGGCAAGGGTG | 61.586 | 60.000 | 6.96 | 4.35 | 0.00 | 4.61 |
8652 | 12638 | 2.063015 | AACGTCCATGGCAAGGGTGA | 62.063 | 55.000 | 6.96 | 0.00 | 0.00 | 4.02 |
8653 | 12639 | 2.040544 | CGTCCATGGCAAGGGTGAC | 61.041 | 63.158 | 6.96 | 0.00 | 0.00 | 3.67 |
8664 | 12650 | 4.023137 | GGGTGACCGTACTAGCCA | 57.977 | 61.111 | 0.00 | 0.00 | 43.64 | 4.75 |
8665 | 12651 | 2.512973 | GGGTGACCGTACTAGCCAT | 58.487 | 57.895 | 0.00 | 0.00 | 43.64 | 4.40 |
8666 | 12652 | 0.104304 | GGGTGACCGTACTAGCCATG | 59.896 | 60.000 | 0.00 | 0.00 | 43.64 | 3.66 |
8667 | 12653 | 0.104304 | GGTGACCGTACTAGCCATGG | 59.896 | 60.000 | 7.63 | 7.63 | 0.00 | 3.66 |
8668 | 12654 | 0.822164 | GTGACCGTACTAGCCATGGT | 59.178 | 55.000 | 14.67 | 8.26 | 38.02 | 3.55 |
8669 | 12655 | 0.821517 | TGACCGTACTAGCCATGGTG | 59.178 | 55.000 | 14.67 | 6.79 | 35.38 | 4.17 |
8670 | 12656 | 0.104304 | GACCGTACTAGCCATGGTGG | 59.896 | 60.000 | 14.67 | 6.41 | 41.55 | 4.61 |
8671 | 12657 | 1.335132 | ACCGTACTAGCCATGGTGGG | 61.335 | 60.000 | 14.67 | 6.04 | 38.19 | 4.61 |
8679 | 12665 | 4.838152 | CCATGGTGGGCGGTCGAG | 62.838 | 72.222 | 2.57 | 0.00 | 32.67 | 4.04 |
8680 | 12666 | 3.770040 | CATGGTGGGCGGTCGAGA | 61.770 | 66.667 | 0.00 | 0.00 | 0.00 | 4.04 |
8681 | 12667 | 2.764128 | ATGGTGGGCGGTCGAGAT | 60.764 | 61.111 | 0.00 | 0.00 | 0.00 | 2.75 |
8682 | 12668 | 3.094062 | ATGGTGGGCGGTCGAGATG | 62.094 | 63.158 | 0.00 | 0.00 | 0.00 | 2.90 |
8683 | 12669 | 3.771160 | GGTGGGCGGTCGAGATGT | 61.771 | 66.667 | 0.00 | 0.00 | 0.00 | 3.06 |
8684 | 12670 | 2.264794 | GTGGGCGGTCGAGATGTT | 59.735 | 61.111 | 0.00 | 0.00 | 0.00 | 2.71 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
68 | 70 | 1.645034 | ATGATTGAGCTCCGAACACG | 58.355 | 50.000 | 12.15 | 0.00 | 0.00 | 4.49 |
251 | 253 | 2.426431 | TCCACTAAGGGACCCTTGAA | 57.574 | 50.000 | 32.64 | 15.20 | 44.44 | 2.69 |
423 | 425 | 3.991683 | AGGGTTCGGGTAAGAGATAACT | 58.008 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
440 | 442 | 7.504574 | ACAAAGTAAAGTGCATAAGTAAAGGGT | 59.495 | 33.333 | 0.00 | 0.00 | 0.00 | 4.34 |
715 | 722 | 3.764434 | GGACATGTGAGTTGAGAGTCCTA | 59.236 | 47.826 | 1.15 | 0.00 | 40.57 | 2.94 |
716 | 723 | 2.564947 | GGACATGTGAGTTGAGAGTCCT | 59.435 | 50.000 | 1.15 | 0.00 | 40.57 | 3.85 |
787 | 794 | 2.280524 | CGGCGTGAAGGTGTTCCA | 60.281 | 61.111 | 0.00 | 0.00 | 35.89 | 3.53 |
788 | 795 | 1.595929 | TTCGGCGTGAAGGTGTTCC | 60.596 | 57.895 | 6.85 | 0.00 | 31.44 | 3.62 |
915 | 928 | 1.305046 | GAGGACTTCGTGGGAGGGA | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 4.20 |
916 | 929 | 2.359967 | GGAGGACTTCGTGGGAGGG | 61.360 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
917 | 930 | 1.305381 | AGGAGGACTTCGTGGGAGG | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
918 | 931 | 1.324005 | GGAGGAGGACTTCGTGGGAG | 61.324 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
919 | 932 | 1.305046 | GGAGGAGGACTTCGTGGGA | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 4.37 |
1244 | 1275 | 6.408320 | CCACCTCAAATTCAGAGAGATCTCAT | 60.408 | 42.308 | 24.39 | 9.93 | 45.21 | 2.90 |
1301 | 1333 | 1.090052 | CCTCCGGGATTTCGAACTGC | 61.090 | 60.000 | 0.00 | 0.00 | 33.58 | 4.40 |
1365 | 1397 | 3.518590 | AGATCACCACGAATACGAAACC | 58.481 | 45.455 | 0.00 | 0.00 | 42.66 | 3.27 |
1367 | 1399 | 3.431856 | CGAGATCACCACGAATACGAAA | 58.568 | 45.455 | 0.00 | 0.00 | 42.66 | 3.46 |
1373 | 1405 | 0.179100 | CCAGCGAGATCACCACGAAT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
1420 | 1453 | 1.679977 | GTGCCATCCCACATGCAGT | 60.680 | 57.895 | 0.00 | 0.00 | 35.80 | 4.40 |
1421 | 1454 | 2.767445 | CGTGCCATCCCACATGCAG | 61.767 | 63.158 | 0.00 | 0.00 | 35.47 | 4.41 |
1422 | 1455 | 2.555302 | ATCGTGCCATCCCACATGCA | 62.555 | 55.000 | 0.00 | 0.00 | 35.47 | 3.96 |
1423 | 1456 | 1.386525 | AATCGTGCCATCCCACATGC | 61.387 | 55.000 | 0.00 | 0.00 | 35.47 | 4.06 |
1424 | 1457 | 0.382873 | CAATCGTGCCATCCCACATG | 59.617 | 55.000 | 0.00 | 0.00 | 35.47 | 3.21 |
1508 | 1546 | 5.975939 | GCATGGATTAGAGAAGCACAATTTC | 59.024 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
1530 | 1568 | 0.533978 | TTGCCTTAACAGACAGCGCA | 60.534 | 50.000 | 11.47 | 0.00 | 0.00 | 6.09 |
1535 | 1573 | 7.531857 | TCCAAATTATTTGCCTTAACAGACA | 57.468 | 32.000 | 11.82 | 0.00 | 39.31 | 3.41 |
1543 | 1581 | 8.428852 | GGTACCATTATCCAAATTATTTGCCTT | 58.571 | 33.333 | 7.15 | 2.20 | 39.31 | 4.35 |
1564 | 1602 | 4.161565 | TCAGAATGTGATACTGTGGGTACC | 59.838 | 45.833 | 2.17 | 2.17 | 45.06 | 3.34 |
1566 | 1604 | 5.023452 | ACTCAGAATGTGATACTGTGGGTA | 58.977 | 41.667 | 0.00 | 0.00 | 37.40 | 3.69 |
1567 | 1605 | 3.840666 | ACTCAGAATGTGATACTGTGGGT | 59.159 | 43.478 | 0.00 | 0.00 | 37.40 | 4.51 |
1581 | 1619 | 1.274728 | AGAGCACGCTGAACTCAGAAT | 59.725 | 47.619 | 10.95 | 0.00 | 46.59 | 2.40 |
1583 | 1621 | 0.038801 | CAGAGCACGCTGAACTCAGA | 60.039 | 55.000 | 10.95 | 0.00 | 46.59 | 3.27 |
1590 | 1628 | 1.153568 | GGCATACAGAGCACGCTGA | 60.154 | 57.895 | 8.44 | 0.00 | 39.20 | 4.26 |
1643 | 1683 | 6.319658 | ACGAATGCCTATTGACAATCTGATTT | 59.680 | 34.615 | 3.36 | 0.00 | 0.00 | 2.17 |
1695 | 1735 | 8.588290 | TGCATGTTTAGGTTAAGTGGAATTAT | 57.412 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
1708 | 1748 | 8.574251 | TGTTTAGTAATGATGCATGTTTAGGT | 57.426 | 30.769 | 2.46 | 0.00 | 0.00 | 3.08 |
1787 | 1827 | 7.744715 | GGTAAACACTTCAGAACAATAACATCG | 59.255 | 37.037 | 0.00 | 0.00 | 0.00 | 3.84 |
1815 | 1857 | 6.668323 | AGACAAGACAATGTGATTTTAACCG | 58.332 | 36.000 | 0.00 | 0.00 | 32.57 | 4.44 |
1833 | 1875 | 5.637387 | GCCTCTCTCTTAAAGTTGAGACAAG | 59.363 | 44.000 | 0.00 | 0.00 | 35.70 | 3.16 |
1848 | 1890 | 2.544721 | TCCACATGAAAGCCTCTCTCT | 58.455 | 47.619 | 0.00 | 0.00 | 0.00 | 3.10 |
1850 | 1892 | 3.522750 | AGATTCCACATGAAAGCCTCTCT | 59.477 | 43.478 | 0.00 | 0.00 | 36.33 | 3.10 |
1851 | 1893 | 3.883669 | AGATTCCACATGAAAGCCTCTC | 58.116 | 45.455 | 0.00 | 0.00 | 36.33 | 3.20 |
2322 | 2372 | 0.746659 | GTTGTTGGGCAAGCAAGACT | 59.253 | 50.000 | 0.00 | 0.00 | 37.83 | 3.24 |
2442 | 2492 | 7.265647 | TGAGATTTTTCGTGGACAACATAAA | 57.734 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2499 | 2549 | 7.094634 | ACACAAGTGGAAGCAGTATTCTTAATG | 60.095 | 37.037 | 5.08 | 0.00 | 34.19 | 1.90 |
2500 | 2550 | 6.942576 | ACACAAGTGGAAGCAGTATTCTTAAT | 59.057 | 34.615 | 5.08 | 0.00 | 34.19 | 1.40 |
2501 | 2551 | 6.204688 | CACACAAGTGGAAGCAGTATTCTTAA | 59.795 | 38.462 | 5.08 | 0.00 | 42.13 | 1.85 |
2528 | 2578 | 0.732571 | CCCACATGTCACCGTTATGC | 59.267 | 55.000 | 0.00 | 0.00 | 0.00 | 3.14 |
3280 | 5787 | 6.096423 | GGATAAAGGGCCCTAAAAAGTTACAG | 59.904 | 42.308 | 28.96 | 0.00 | 0.00 | 2.74 |
3284 | 5791 | 5.023452 | CAGGATAAAGGGCCCTAAAAAGTT | 58.977 | 41.667 | 28.96 | 17.52 | 0.00 | 2.66 |
3339 | 5846 | 8.250332 | TGATAATAACAAAACTTCATCAAGCCC | 58.750 | 33.333 | 0.00 | 0.00 | 32.09 | 5.19 |
3392 | 6231 | 9.677567 | CAAGAGAATTGAGAACGGAAATTTTAA | 57.322 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
3445 | 6284 | 9.085645 | TCGGTATAAAATGGACTATGATACACT | 57.914 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
3696 | 6543 | 5.821470 | CAGCTCATGAGAAATCATACCTTGT | 59.179 | 40.000 | 27.04 | 0.00 | 0.00 | 3.16 |
3704 | 6551 | 7.317842 | GAAGAATTCAGCTCATGAGAAATCA | 57.682 | 36.000 | 27.04 | 5.75 | 46.62 | 2.57 |
3961 | 6814 | 9.408648 | CCCAAGTTGATAAGAATAAACCTGTAT | 57.591 | 33.333 | 3.87 | 0.00 | 27.54 | 2.29 |
4047 | 6900 | 6.157297 | AGGGGCTAATACACAATTACACACTA | 59.843 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
4161 | 7014 | 8.870075 | AGATATTTAATGTGGAATCTTAGGCC | 57.130 | 34.615 | 0.00 | 0.00 | 0.00 | 5.19 |
4458 | 7312 | 6.478344 | CACCATCTATCTGTAAAGTTGAGAGC | 59.522 | 42.308 | 0.00 | 0.00 | 0.00 | 4.09 |
4594 | 7450 | 5.447818 | GCTACCAATGACATGTTTGCTAGAC | 60.448 | 44.000 | 13.36 | 5.00 | 0.00 | 2.59 |
4656 | 7512 | 5.864474 | AGACTTGCTACATTAGTTTGTCTCG | 59.136 | 40.000 | 0.00 | 0.00 | 30.81 | 4.04 |
4745 | 7601 | 2.276201 | CAAGATGCATGGCAACCAATG | 58.724 | 47.619 | 2.46 | 0.00 | 43.62 | 2.82 |
4764 | 7620 | 2.187958 | CTGGGACTGATGAAGGGTACA | 58.812 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
4778 | 7634 | 5.858381 | ACATACATGATACATCACTGGGAC | 58.142 | 41.667 | 0.00 | 0.00 | 40.03 | 4.46 |
4782 | 7638 | 7.386025 | CCCAGTAACATACATGATACATCACTG | 59.614 | 40.741 | 0.00 | 4.56 | 40.03 | 3.66 |
4787 | 7643 | 5.011635 | TCGCCCAGTAACATACATGATACAT | 59.988 | 40.000 | 0.00 | 0.00 | 38.18 | 2.29 |
4788 | 7644 | 4.342665 | TCGCCCAGTAACATACATGATACA | 59.657 | 41.667 | 0.00 | 0.00 | 38.18 | 2.29 |
4789 | 7645 | 4.878439 | TCGCCCAGTAACATACATGATAC | 58.122 | 43.478 | 0.00 | 0.00 | 36.61 | 2.24 |
4790 | 7646 | 5.738619 | ATCGCCCAGTAACATACATGATA | 57.261 | 39.130 | 0.00 | 0.00 | 0.00 | 2.15 |
4791 | 7647 | 4.623932 | ATCGCCCAGTAACATACATGAT | 57.376 | 40.909 | 0.00 | 0.00 | 0.00 | 2.45 |
4792 | 7648 | 4.141824 | TGAATCGCCCAGTAACATACATGA | 60.142 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
4793 | 7649 | 4.024893 | GTGAATCGCCCAGTAACATACATG | 60.025 | 45.833 | 0.00 | 0.00 | 0.00 | 3.21 |
4927 | 7783 | 2.941064 | CCTGGTCTGCAACAGATGTATG | 59.059 | 50.000 | 12.74 | 0.00 | 42.73 | 2.39 |
5138 | 7994 | 3.451141 | TGGCCAGCTAAAAACACAAAG | 57.549 | 42.857 | 0.00 | 0.00 | 0.00 | 2.77 |
5241 | 8098 | 5.125417 | GGCAGTAAACATTGAAGGAAGCATA | 59.875 | 40.000 | 0.00 | 0.00 | 0.00 | 3.14 |
5279 | 8136 | 8.701895 | CCCTAGTTAGTCATACTAAAATGTCCA | 58.298 | 37.037 | 1.26 | 0.00 | 41.80 | 4.02 |
5306 | 8163 | 6.443206 | TGATAAATTTCCCACATCCCACAAAT | 59.557 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
5414 | 8271 | 4.130118 | CTGCTCCACTGTAGTTCTTTGTT | 58.870 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
5787 | 8644 | 1.722034 | AAGGGAGAAGAGTGACAGCA | 58.278 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
5904 | 8764 | 8.258007 | AGCTATAAGCATGTAGTTTGTTACAGA | 58.742 | 33.333 | 1.22 | 0.00 | 45.56 | 3.41 |
5973 | 8833 | 0.978907 | TTTTGGGACGGAGGGAGTAC | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
5974 | 8834 | 1.961133 | ATTTTGGGACGGAGGGAGTA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
5975 | 8835 | 1.961133 | TATTTTGGGACGGAGGGAGT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5976 | 8836 | 2.238898 | ACTTATTTTGGGACGGAGGGAG | 59.761 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5977 | 8837 | 2.026636 | CACTTATTTTGGGACGGAGGGA | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5978 | 8838 | 2.290705 | ACACTTATTTTGGGACGGAGGG | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5979 | 8839 | 3.007635 | GACACTTATTTTGGGACGGAGG | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5980 | 8840 | 3.933332 | GAGACACTTATTTTGGGACGGAG | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
5981 | 8841 | 3.325425 | TGAGACACTTATTTTGGGACGGA | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
5982 | 8842 | 3.670625 | TGAGACACTTATTTTGGGACGG | 58.329 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
5983 | 8843 | 5.880054 | ATTGAGACACTTATTTTGGGACG | 57.120 | 39.130 | 0.00 | 0.00 | 0.00 | 4.79 |
6009 | 8869 | 9.391006 | TCAAAATAAGTGTCTCAACTTTGTACT | 57.609 | 29.630 | 0.00 | 0.00 | 40.77 | 2.73 |
6010 | 8870 | 9.651718 | CTCAAAATAAGTGTCTCAACTTTGTAC | 57.348 | 33.333 | 0.00 | 0.00 | 40.77 | 2.90 |
6011 | 8871 | 9.607988 | TCTCAAAATAAGTGTCTCAACTTTGTA | 57.392 | 29.630 | 0.00 | 0.00 | 40.77 | 2.41 |
6012 | 8872 | 8.398665 | GTCTCAAAATAAGTGTCTCAACTTTGT | 58.601 | 33.333 | 0.00 | 0.00 | 40.77 | 2.83 |
6013 | 8873 | 7.584123 | CGTCTCAAAATAAGTGTCTCAACTTTG | 59.416 | 37.037 | 0.00 | 0.00 | 40.77 | 2.77 |
6014 | 8874 | 7.254795 | CCGTCTCAAAATAAGTGTCTCAACTTT | 60.255 | 37.037 | 0.00 | 0.00 | 40.77 | 2.66 |
6015 | 8875 | 6.202954 | CCGTCTCAAAATAAGTGTCTCAACTT | 59.797 | 38.462 | 0.00 | 0.00 | 42.89 | 2.66 |
6016 | 8876 | 5.696724 | CCGTCTCAAAATAAGTGTCTCAACT | 59.303 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6017 | 8877 | 5.694910 | TCCGTCTCAAAATAAGTGTCTCAAC | 59.305 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
6018 | 8878 | 5.849510 | TCCGTCTCAAAATAAGTGTCTCAA | 58.150 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
6019 | 8879 | 5.462530 | TCCGTCTCAAAATAAGTGTCTCA | 57.537 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
6020 | 8880 | 4.865365 | CCTCCGTCTCAAAATAAGTGTCTC | 59.135 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
6021 | 8881 | 4.322801 | CCCTCCGTCTCAAAATAAGTGTCT | 60.323 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
6022 | 8882 | 3.933332 | CCCTCCGTCTCAAAATAAGTGTC | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
6023 | 8883 | 3.581332 | TCCCTCCGTCTCAAAATAAGTGT | 59.419 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
6024 | 8884 | 4.184629 | CTCCCTCCGTCTCAAAATAAGTG | 58.815 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
6025 | 8885 | 3.838903 | ACTCCCTCCGTCTCAAAATAAGT | 59.161 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
6026 | 8886 | 4.473477 | ACTCCCTCCGTCTCAAAATAAG | 57.527 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
6027 | 8887 | 7.507956 | TCATATACTCCCTCCGTCTCAAAATAA | 59.492 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
6028 | 8888 | 7.008332 | TCATATACTCCCTCCGTCTCAAAATA | 58.992 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
6029 | 8889 | 5.839063 | TCATATACTCCCTCCGTCTCAAAAT | 59.161 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
6030 | 8890 | 5.205821 | TCATATACTCCCTCCGTCTCAAAA | 58.794 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
6031 | 8891 | 4.800023 | TCATATACTCCCTCCGTCTCAAA | 58.200 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
6032 | 8892 | 4.448720 | TCATATACTCCCTCCGTCTCAA | 57.551 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
6033 | 8893 | 4.659529 | ATCATATACTCCCTCCGTCTCA | 57.340 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
6034 | 8894 | 5.986501 | AAATCATATACTCCCTCCGTCTC | 57.013 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
6035 | 8895 | 7.850935 | TTAAAATCATATACTCCCTCCGTCT | 57.149 | 36.000 | 0.00 | 0.00 | 0.00 | 4.18 |
6036 | 8896 | 8.897872 | TTTTAAAATCATATACTCCCTCCGTC | 57.102 | 34.615 | 0.00 | 0.00 | 0.00 | 4.79 |
6037 | 8897 | 9.503399 | GATTTTAAAATCATATACTCCCTCCGT | 57.497 | 33.333 | 28.20 | 0.00 | 43.29 | 4.69 |
6038 | 8898 | 8.947115 | GGATTTTAAAATCATATACTCCCTCCG | 58.053 | 37.037 | 31.78 | 0.00 | 45.10 | 4.63 |
6039 | 8899 | 9.244292 | GGGATTTTAAAATCATATACTCCCTCC | 57.756 | 37.037 | 31.78 | 19.60 | 45.10 | 4.30 |
6063 | 8923 | 7.560796 | AATAAGAGATACATGAGGGTAAGGG | 57.439 | 40.000 | 0.00 | 0.00 | 0.00 | 3.95 |
6285 | 9146 | 7.619050 | ACAATGATGATGTGTTCTAGAGACTT | 58.381 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
6306 | 9167 | 7.002879 | AGCTTCCAGCAATATATTCAGACAAT | 58.997 | 34.615 | 0.00 | 0.00 | 45.56 | 2.71 |
6347 | 9208 | 6.461509 | CCAAAGCTGATTTACCACTGAAAAGT | 60.462 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
6470 | 9331 | 5.909610 | GTGAAAACCGCAATTAGAGATATGC | 59.090 | 40.000 | 0.00 | 0.00 | 35.49 | 3.14 |
6485 | 9346 | 5.573282 | CCGCAGATATCTATAGTGAAAACCG | 59.427 | 44.000 | 4.54 | 0.00 | 0.00 | 4.44 |
6495 | 9356 | 7.888250 | ATCATTGTCTCCGCAGATATCTATA | 57.112 | 36.000 | 4.54 | 0.00 | 0.00 | 1.31 |
6607 | 9468 | 9.261180 | GATACACGATTCAAATAGATTCTTCCA | 57.739 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
6788 | 9649 | 5.362430 | ACTTTTGTGGCATTGAGGTTCTAAA | 59.638 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
6813 | 9674 | 5.733620 | AATGAAAGGACAAATGACAGCAT | 57.266 | 34.783 | 0.00 | 0.00 | 35.92 | 3.79 |
6838 | 9699 | 5.904362 | AAGGAGCACCAAATACTTCAATC | 57.096 | 39.130 | 2.07 | 0.00 | 38.94 | 2.67 |
7001 | 9865 | 2.310538 | CAGCCAAGAAAAGACTGGGTT | 58.689 | 47.619 | 0.00 | 0.00 | 33.73 | 4.11 |
7002 | 9866 | 1.986882 | CAGCCAAGAAAAGACTGGGT | 58.013 | 50.000 | 0.00 | 0.00 | 33.73 | 4.51 |
7007 | 9871 | 3.375642 | GTCTTTGCAGCCAAGAAAAGAC | 58.624 | 45.455 | 15.68 | 15.68 | 46.45 | 3.01 |
7026 | 9890 | 6.610741 | AGACAAAGTCAAGTCAAAGATGTC | 57.389 | 37.500 | 0.00 | 0.00 | 37.23 | 3.06 |
7030 | 9894 | 6.655003 | AGTCAAAGACAAAGTCAAGTCAAAGA | 59.345 | 34.615 | 0.00 | 0.00 | 37.23 | 2.52 |
7083 | 9947 | 7.301068 | TGTTCCAATAACAAGCAAGTTTTTG | 57.699 | 32.000 | 13.56 | 13.56 | 38.97 | 2.44 |
7086 | 9950 | 6.402222 | TGTTGTTCCAATAACAAGCAAGTTT | 58.598 | 32.000 | 3.67 | 0.00 | 40.38 | 2.66 |
7218 | 10083 | 6.821388 | ACCATAGACCTCAATGTATGTCTTC | 58.179 | 40.000 | 7.20 | 0.00 | 38.85 | 2.87 |
7266 | 10131 | 7.310664 | ACTGTTCAAGAATATGCAATGTGAAG | 58.689 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
7417 | 10397 | 1.732809 | CTGCTGCTGTCTCAACATCTG | 59.267 | 52.381 | 0.00 | 0.00 | 34.13 | 2.90 |
7472 | 10452 | 6.557568 | ACCATTTAAGTGGAGGGAATACAAA | 58.442 | 36.000 | 22.68 | 0.00 | 42.02 | 2.83 |
7794 | 10774 | 0.457166 | CTCGCCGAACCGTGACAATA | 60.457 | 55.000 | 0.00 | 0.00 | 0.00 | 1.90 |
7820 | 10800 | 1.324736 | CGACGGAAGCATAGCAAAGAC | 59.675 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
7902 | 10882 | 4.532834 | TGGCCAGGTAAATATTTCTCACC | 58.467 | 43.478 | 0.00 | 7.21 | 0.00 | 4.02 |
7903 | 10883 | 5.507985 | GCATGGCCAGGTAAATATTTCTCAC | 60.508 | 44.000 | 20.22 | 0.00 | 0.00 | 3.51 |
8055 | 11041 | 8.442632 | ACCCTTAACAACTTCAAAGTTAGTAC | 57.557 | 34.615 | 7.76 | 0.00 | 46.89 | 2.73 |
8136 | 11124 | 3.804873 | ACAACGCACTTTTGTTTGTTTGT | 59.195 | 34.783 | 0.00 | 0.00 | 33.23 | 2.83 |
8154 | 11187 | 3.476552 | TGTGGTCTGAATCCTGAACAAC | 58.523 | 45.455 | 0.00 | 0.00 | 39.22 | 3.32 |
8179 | 11212 | 9.189156 | TGGAAGCTTGATTTAGTTTTGCTATAT | 57.811 | 29.630 | 2.10 | 0.00 | 0.00 | 0.86 |
8201 | 11235 | 2.041485 | TGTGGCTCAAATCCTCATGGAA | 59.959 | 45.455 | 0.00 | 0.00 | 46.80 | 3.53 |
8227 | 12211 | 2.488153 | GGAATTGGCTATTACGGATGCC | 59.512 | 50.000 | 0.00 | 0.00 | 45.10 | 4.40 |
8242 | 12226 | 2.879826 | GGAAGCAAATCCGTGGAATTG | 58.120 | 47.619 | 11.54 | 11.54 | 37.89 | 2.32 |
8272 | 12256 | 0.744414 | CCAGTGGATGGCTGTTACGG | 60.744 | 60.000 | 1.68 | 0.00 | 43.83 | 4.02 |
8295 | 12279 | 0.038744 | ATTTGAGGACCTGTGGGCTG | 59.961 | 55.000 | 0.00 | 0.00 | 35.63 | 4.85 |
8296 | 12280 | 0.779997 | AATTTGAGGACCTGTGGGCT | 59.220 | 50.000 | 0.00 | 0.00 | 35.63 | 5.19 |
8297 | 12281 | 1.177401 | GAATTTGAGGACCTGTGGGC | 58.823 | 55.000 | 0.00 | 0.00 | 35.63 | 5.36 |
8298 | 12282 | 1.075374 | TGGAATTTGAGGACCTGTGGG | 59.925 | 52.381 | 0.00 | 0.00 | 38.88 | 4.61 |
8299 | 12283 | 2.162681 | GTGGAATTTGAGGACCTGTGG | 58.837 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
8300 | 12284 | 1.806542 | CGTGGAATTTGAGGACCTGTG | 59.193 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
8301 | 12285 | 1.271379 | CCGTGGAATTTGAGGACCTGT | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
8302 | 12286 | 1.003118 | TCCGTGGAATTTGAGGACCTG | 59.997 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
8303 | 12287 | 1.358152 | TCCGTGGAATTTGAGGACCT | 58.642 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
8361 | 12345 | 2.807967 | TGAAATGTGGAAGCTCTTGACG | 59.192 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
8364 | 12348 | 3.003689 | ACGTTGAAATGTGGAAGCTCTTG | 59.996 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
8468 | 12454 | 6.903883 | ATTATAACAGGAGTAACTTGCACG | 57.096 | 37.500 | 0.00 | 0.00 | 0.00 | 5.34 |
8479 | 12465 | 5.131142 | ACAGGGGACAGAATTATAACAGGAG | 59.869 | 44.000 | 0.00 | 0.00 | 0.00 | 3.69 |
8480 | 12466 | 5.036916 | ACAGGGGACAGAATTATAACAGGA | 58.963 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
8481 | 12467 | 5.373812 | ACAGGGGACAGAATTATAACAGG | 57.626 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
8487 | 12473 | 8.732854 | TCCAATTATAACAGGGGACAGAATTAT | 58.267 | 33.333 | 5.45 | 0.00 | 0.00 | 1.28 |
8499 | 12485 | 8.966868 | ACAAATTACAGGTCCAATTATAACAGG | 58.033 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
8500 | 12486 | 9.787532 | CACAAATTACAGGTCCAATTATAACAG | 57.212 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
8501 | 12487 | 8.744652 | CCACAAATTACAGGTCCAATTATAACA | 58.255 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
8502 | 12488 | 8.962679 | TCCACAAATTACAGGTCCAATTATAAC | 58.037 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
8504 | 12490 | 9.707957 | AATCCACAAATTACAGGTCCAATTATA | 57.292 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
8505 | 12491 | 8.477256 | CAATCCACAAATTACAGGTCCAATTAT | 58.523 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
8506 | 12492 | 7.671819 | TCAATCCACAAATTACAGGTCCAATTA | 59.328 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
8508 | 12494 | 6.015918 | TCAATCCACAAATTACAGGTCCAAT | 58.984 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
8569 | 12555 | 6.643360 | GCCGGATTACACATGTTTAACTTTTT | 59.357 | 34.615 | 5.05 | 0.00 | 0.00 | 1.94 |
8570 | 12556 | 6.153756 | GCCGGATTACACATGTTTAACTTTT | 58.846 | 36.000 | 5.05 | 0.00 | 0.00 | 2.27 |
8571 | 12557 | 5.241949 | TGCCGGATTACACATGTTTAACTTT | 59.758 | 36.000 | 5.05 | 0.00 | 0.00 | 2.66 |
8572 | 12558 | 4.762765 | TGCCGGATTACACATGTTTAACTT | 59.237 | 37.500 | 5.05 | 0.00 | 0.00 | 2.66 |
8573 | 12559 | 4.328536 | TGCCGGATTACACATGTTTAACT | 58.671 | 39.130 | 5.05 | 0.00 | 0.00 | 2.24 |
8574 | 12560 | 4.688511 | TGCCGGATTACACATGTTTAAC | 57.311 | 40.909 | 5.05 | 2.18 | 0.00 | 2.01 |
8575 | 12561 | 7.934665 | ACTATATGCCGGATTACACATGTTTAA | 59.065 | 33.333 | 5.05 | 6.90 | 0.00 | 1.52 |
8576 | 12562 | 7.386573 | CACTATATGCCGGATTACACATGTTTA | 59.613 | 37.037 | 5.05 | 0.00 | 0.00 | 2.01 |
8577 | 12563 | 6.204688 | CACTATATGCCGGATTACACATGTTT | 59.795 | 38.462 | 5.05 | 0.00 | 0.00 | 2.83 |
8578 | 12564 | 5.700832 | CACTATATGCCGGATTACACATGTT | 59.299 | 40.000 | 5.05 | 0.00 | 0.00 | 2.71 |
8579 | 12565 | 5.011635 | TCACTATATGCCGGATTACACATGT | 59.988 | 40.000 | 5.05 | 0.00 | 0.00 | 3.21 |
8580 | 12566 | 5.478407 | TCACTATATGCCGGATTACACATG | 58.522 | 41.667 | 5.05 | 0.00 | 0.00 | 3.21 |
8581 | 12567 | 5.738619 | TCACTATATGCCGGATTACACAT | 57.261 | 39.130 | 5.05 | 0.00 | 0.00 | 3.21 |
8582 | 12568 | 5.163395 | TGTTCACTATATGCCGGATTACACA | 60.163 | 40.000 | 5.05 | 0.00 | 0.00 | 3.72 |
8583 | 12569 | 5.176958 | GTGTTCACTATATGCCGGATTACAC | 59.823 | 44.000 | 5.05 | 0.28 | 0.00 | 2.90 |
8584 | 12570 | 5.163395 | TGTGTTCACTATATGCCGGATTACA | 60.163 | 40.000 | 5.05 | 0.00 | 0.00 | 2.41 |
8585 | 12571 | 5.294356 | TGTGTTCACTATATGCCGGATTAC | 58.706 | 41.667 | 5.05 | 0.00 | 0.00 | 1.89 |
8586 | 12572 | 5.538849 | TGTGTTCACTATATGCCGGATTA | 57.461 | 39.130 | 5.05 | 0.00 | 0.00 | 1.75 |
8587 | 12573 | 4.415881 | TGTGTTCACTATATGCCGGATT | 57.584 | 40.909 | 5.05 | 0.00 | 0.00 | 3.01 |
8588 | 12574 | 4.202357 | ACATGTGTTCACTATATGCCGGAT | 60.202 | 41.667 | 5.05 | 0.00 | 0.00 | 4.18 |
8589 | 12575 | 3.133901 | ACATGTGTTCACTATATGCCGGA | 59.866 | 43.478 | 5.05 | 0.00 | 0.00 | 5.14 |
8590 | 12576 | 3.466836 | ACATGTGTTCACTATATGCCGG | 58.533 | 45.455 | 0.00 | 0.00 | 0.00 | 6.13 |
8591 | 12577 | 4.025730 | GTGACATGTGTTCACTATATGCCG | 60.026 | 45.833 | 1.15 | 0.00 | 0.00 | 5.69 |
8592 | 12578 | 4.025730 | CGTGACATGTGTTCACTATATGCC | 60.026 | 45.833 | 1.15 | 0.00 | 32.68 | 4.40 |
8593 | 12579 | 4.803613 | TCGTGACATGTGTTCACTATATGC | 59.196 | 41.667 | 1.15 | 0.00 | 32.68 | 3.14 |
8594 | 12580 | 6.265577 | TCTCGTGACATGTGTTCACTATATG | 58.734 | 40.000 | 1.15 | 3.06 | 32.68 | 1.78 |
8595 | 12581 | 6.318900 | TCTCTCGTGACATGTGTTCACTATAT | 59.681 | 38.462 | 1.15 | 0.00 | 32.68 | 0.86 |
8596 | 12582 | 5.646360 | TCTCTCGTGACATGTGTTCACTATA | 59.354 | 40.000 | 1.15 | 0.00 | 32.68 | 1.31 |
8597 | 12583 | 4.459337 | TCTCTCGTGACATGTGTTCACTAT | 59.541 | 41.667 | 1.15 | 0.00 | 32.68 | 2.12 |
8598 | 12584 | 3.818773 | TCTCTCGTGACATGTGTTCACTA | 59.181 | 43.478 | 1.15 | 0.00 | 32.68 | 2.74 |
8599 | 12585 | 2.623416 | TCTCTCGTGACATGTGTTCACT | 59.377 | 45.455 | 1.15 | 0.00 | 32.68 | 3.41 |
8600 | 12586 | 3.013276 | TCTCTCGTGACATGTGTTCAC | 57.987 | 47.619 | 1.15 | 4.40 | 0.00 | 3.18 |
8601 | 12587 | 3.726291 | TTCTCTCGTGACATGTGTTCA | 57.274 | 42.857 | 1.15 | 0.00 | 0.00 | 3.18 |
8602 | 12588 | 3.802139 | TGTTTCTCTCGTGACATGTGTTC | 59.198 | 43.478 | 1.15 | 0.00 | 0.00 | 3.18 |
8603 | 12589 | 3.555956 | GTGTTTCTCTCGTGACATGTGTT | 59.444 | 43.478 | 1.15 | 0.00 | 0.00 | 3.32 |
8604 | 12590 | 3.123804 | GTGTTTCTCTCGTGACATGTGT | 58.876 | 45.455 | 1.15 | 0.00 | 0.00 | 3.72 |
8605 | 12591 | 3.123050 | TGTGTTTCTCTCGTGACATGTG | 58.877 | 45.455 | 1.15 | 0.00 | 0.00 | 3.21 |
8606 | 12592 | 3.452755 | TGTGTTTCTCTCGTGACATGT | 57.547 | 42.857 | 0.00 | 0.00 | 0.00 | 3.21 |
8607 | 12593 | 4.794248 | TTTGTGTTTCTCTCGTGACATG | 57.206 | 40.909 | 0.00 | 0.00 | 0.00 | 3.21 |
8608 | 12594 | 5.333339 | CGAATTTGTGTTTCTCTCGTGACAT | 60.333 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
8609 | 12595 | 4.026062 | CGAATTTGTGTTTCTCTCGTGACA | 60.026 | 41.667 | 0.00 | 0.00 | 0.00 | 3.58 |
8610 | 12596 | 4.208460 | TCGAATTTGTGTTTCTCTCGTGAC | 59.792 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
8611 | 12597 | 4.364860 | TCGAATTTGTGTTTCTCTCGTGA | 58.635 | 39.130 | 0.00 | 0.00 | 0.00 | 4.35 |
8612 | 12598 | 4.708868 | TCGAATTTGTGTTTCTCTCGTG | 57.291 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
8613 | 12599 | 4.317839 | CGTTCGAATTTGTGTTTCTCTCGT | 60.318 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
8614 | 12600 | 4.134546 | CGTTCGAATTTGTGTTTCTCTCG | 58.865 | 43.478 | 0.00 | 0.00 | 0.00 | 4.04 |
8615 | 12601 | 5.079397 | ACGTTCGAATTTGTGTTTCTCTC | 57.921 | 39.130 | 0.00 | 0.00 | 0.00 | 3.20 |
8616 | 12602 | 4.025145 | GGACGTTCGAATTTGTGTTTCTCT | 60.025 | 41.667 | 0.00 | 0.00 | 0.00 | 3.10 |
8617 | 12603 | 4.209112 | GGACGTTCGAATTTGTGTTTCTC | 58.791 | 43.478 | 0.00 | 0.00 | 0.00 | 2.87 |
8618 | 12604 | 3.623960 | TGGACGTTCGAATTTGTGTTTCT | 59.376 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
8619 | 12605 | 3.942739 | TGGACGTTCGAATTTGTGTTTC | 58.057 | 40.909 | 0.00 | 0.00 | 0.00 | 2.78 |
8620 | 12606 | 4.286910 | CATGGACGTTCGAATTTGTGTTT | 58.713 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
8621 | 12607 | 3.304391 | CCATGGACGTTCGAATTTGTGTT | 60.304 | 43.478 | 5.56 | 0.00 | 0.00 | 3.32 |
8622 | 12608 | 2.225491 | CCATGGACGTTCGAATTTGTGT | 59.775 | 45.455 | 5.56 | 0.00 | 0.00 | 3.72 |
8623 | 12609 | 2.850321 | CCATGGACGTTCGAATTTGTG | 58.150 | 47.619 | 5.56 | 0.00 | 0.00 | 3.33 |
8624 | 12610 | 1.199097 | GCCATGGACGTTCGAATTTGT | 59.801 | 47.619 | 18.40 | 0.14 | 0.00 | 2.83 |
8625 | 12611 | 1.198867 | TGCCATGGACGTTCGAATTTG | 59.801 | 47.619 | 18.40 | 0.00 | 0.00 | 2.32 |
8626 | 12612 | 1.529226 | TGCCATGGACGTTCGAATTT | 58.471 | 45.000 | 18.40 | 0.00 | 0.00 | 1.82 |
8627 | 12613 | 1.468520 | CTTGCCATGGACGTTCGAATT | 59.531 | 47.619 | 18.40 | 0.00 | 0.00 | 2.17 |
8628 | 12614 | 1.086696 | CTTGCCATGGACGTTCGAAT | 58.913 | 50.000 | 18.40 | 0.00 | 0.00 | 3.34 |
8629 | 12615 | 0.953471 | CCTTGCCATGGACGTTCGAA | 60.953 | 55.000 | 18.40 | 0.00 | 0.00 | 3.71 |
8630 | 12616 | 1.375396 | CCTTGCCATGGACGTTCGA | 60.375 | 57.895 | 18.40 | 0.00 | 0.00 | 3.71 |
8631 | 12617 | 2.398554 | CCCTTGCCATGGACGTTCG | 61.399 | 63.158 | 18.40 | 0.00 | 0.00 | 3.95 |
8632 | 12618 | 1.303317 | ACCCTTGCCATGGACGTTC | 60.303 | 57.895 | 18.40 | 0.00 | 0.00 | 3.95 |
8633 | 12619 | 1.603455 | CACCCTTGCCATGGACGTT | 60.603 | 57.895 | 18.40 | 0.00 | 0.00 | 3.99 |
8634 | 12620 | 2.034066 | CACCCTTGCCATGGACGT | 59.966 | 61.111 | 18.40 | 0.00 | 0.00 | 4.34 |
8635 | 12621 | 2.040544 | GTCACCCTTGCCATGGACG | 61.041 | 63.158 | 18.40 | 1.78 | 0.00 | 4.79 |
8636 | 12622 | 1.678970 | GGTCACCCTTGCCATGGAC | 60.679 | 63.158 | 18.40 | 7.64 | 0.00 | 4.02 |
8637 | 12623 | 2.763215 | GGTCACCCTTGCCATGGA | 59.237 | 61.111 | 18.40 | 0.00 | 0.00 | 3.41 |
8638 | 12624 | 2.191786 | TACGGTCACCCTTGCCATGG | 62.192 | 60.000 | 7.63 | 7.63 | 0.00 | 3.66 |
8639 | 12625 | 1.024579 | GTACGGTCACCCTTGCCATG | 61.025 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
8640 | 12626 | 1.198759 | AGTACGGTCACCCTTGCCAT | 61.199 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
8641 | 12627 | 0.542467 | TAGTACGGTCACCCTTGCCA | 60.542 | 55.000 | 0.00 | 0.00 | 0.00 | 4.92 |
8642 | 12628 | 0.175073 | CTAGTACGGTCACCCTTGCC | 59.825 | 60.000 | 0.00 | 0.00 | 0.00 | 4.52 |
8643 | 12629 | 0.459759 | GCTAGTACGGTCACCCTTGC | 60.460 | 60.000 | 0.00 | 0.00 | 0.00 | 4.01 |
8644 | 12630 | 0.175073 | GGCTAGTACGGTCACCCTTG | 59.825 | 60.000 | 0.00 | 0.00 | 0.00 | 3.61 |
8645 | 12631 | 0.251922 | TGGCTAGTACGGTCACCCTT | 60.252 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
8646 | 12632 | 0.032416 | ATGGCTAGTACGGTCACCCT | 60.032 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
8647 | 12633 | 0.104304 | CATGGCTAGTACGGTCACCC | 59.896 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
8648 | 12634 | 0.104304 | CCATGGCTAGTACGGTCACC | 59.896 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
8649 | 12635 | 0.822164 | ACCATGGCTAGTACGGTCAC | 59.178 | 55.000 | 13.04 | 0.00 | 0.00 | 3.67 |
8650 | 12636 | 0.821517 | CACCATGGCTAGTACGGTCA | 59.178 | 55.000 | 13.04 | 0.00 | 0.00 | 4.02 |
8651 | 12637 | 0.104304 | CCACCATGGCTAGTACGGTC | 59.896 | 60.000 | 13.04 | 0.00 | 0.00 | 4.79 |
8652 | 12638 | 1.335132 | CCCACCATGGCTAGTACGGT | 61.335 | 60.000 | 13.04 | 0.00 | 35.79 | 4.83 |
8653 | 12639 | 1.445942 | CCCACCATGGCTAGTACGG | 59.554 | 63.158 | 13.04 | 0.89 | 35.79 | 4.02 |
8662 | 12648 | 4.838152 | CTCGACCGCCCACCATGG | 62.838 | 72.222 | 11.19 | 11.19 | 37.25 | 3.66 |
8663 | 12649 | 3.094062 | ATCTCGACCGCCCACCATG | 62.094 | 63.158 | 0.00 | 0.00 | 0.00 | 3.66 |
8664 | 12650 | 2.764128 | ATCTCGACCGCCCACCAT | 60.764 | 61.111 | 0.00 | 0.00 | 0.00 | 3.55 |
8665 | 12651 | 3.770040 | CATCTCGACCGCCCACCA | 61.770 | 66.667 | 0.00 | 0.00 | 0.00 | 4.17 |
8666 | 12652 | 3.310860 | AACATCTCGACCGCCCACC | 62.311 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
8667 | 12653 | 2.264794 | AACATCTCGACCGCCCAC | 59.735 | 61.111 | 0.00 | 0.00 | 0.00 | 4.61 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.