Multiple sequence alignment - TraesCS1A01G339500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G339500 chr1A 100.000 6670 0 0 1 6670 529672123 529665454 0.000000e+00 12318.0
1 TraesCS1A01G339500 chr1A 98.113 106 2 0 5281 5386 529666807 529666702 1.140000e-42 185.0
2 TraesCS1A01G339500 chr1A 98.113 106 2 0 5317 5422 529666843 529666738 1.140000e-42 185.0
3 TraesCS1A01G339500 chr1A 95.946 74 3 0 5281 5354 529666771 529666698 3.270000e-23 121.0
4 TraesCS1A01G339500 chr1A 95.946 74 3 0 5353 5426 529666843 529666770 3.270000e-23 121.0
5 TraesCS1A01G339500 chr1A 83.516 91 15 0 6571 6661 458396976 458396886 1.190000e-12 86.1
6 TraesCS1A01G339500 chr1D 96.064 4090 123 11 2605 6670 431431202 431427127 0.000000e+00 6626.0
7 TraesCS1A01G339500 chr1D 92.119 1954 81 29 645 2577 431433093 431431192 0.000000e+00 2687.0
8 TraesCS1A01G339500 chr1D 91.949 236 19 0 54 289 475892893 475893128 1.390000e-86 331.0
9 TraesCS1A01G339500 chr1D 92.275 233 17 1 56 287 84708891 84709123 4.990000e-86 329.0
10 TraesCS1A01G339500 chr1D 98.113 106 2 0 5317 5422 431428525 431428420 1.140000e-42 185.0
11 TraesCS1A01G339500 chr1D 85.542 166 24 0 389 554 454657192 454657027 2.470000e-39 174.0
12 TraesCS1A01G339500 chr1D 96.154 104 4 0 5281 5384 431428489 431428386 3.200000e-38 171.0
13 TraesCS1A01G339500 chr1D 97.143 70 2 0 5353 5422 431428525 431428456 1.180000e-22 119.0
14 TraesCS1A01G339500 chr1D 86.364 110 14 1 445 554 487716275 487716167 1.180000e-22 119.0
15 TraesCS1A01G339500 chr1D 85.057 87 11 1 5923 6007 431427735 431427649 3.310000e-13 87.9
16 TraesCS1A01G339500 chr1D 86.667 75 10 0 6587 6661 357215056 357214982 4.290000e-12 84.2
17 TraesCS1A01G339500 chr1D 97.561 41 0 1 588 627 431433204 431433164 1.200000e-07 69.4
18 TraesCS1A01G339500 chr1B 95.975 4075 139 11 2603 6670 582549094 582545038 0.000000e+00 6593.0
19 TraesCS1A01G339500 chr1B 91.818 1650 73 31 678 2306 582551161 582549553 0.000000e+00 2242.0
20 TraesCS1A01G339500 chr1B 92.902 479 27 4 2102 2580 582549552 582549081 0.000000e+00 689.0
21 TraesCS1A01G339500 chr1B 98.113 106 2 0 5281 5386 582546381 582546276 1.140000e-42 185.0
22 TraesCS1A01G339500 chr1B 96.364 110 4 0 5317 5426 582546417 582546308 1.480000e-41 182.0
23 TraesCS1A01G339500 chr1B 94.286 70 4 0 5353 5422 582546417 582546348 2.540000e-19 108.0
24 TraesCS1A01G339500 chr1B 86.667 75 10 0 6587 6661 480656715 480656641 4.290000e-12 84.2
25 TraesCS1A01G339500 chr1B 84.091 88 12 1 5923 6008 582545641 582545554 4.290000e-12 84.2
26 TraesCS1A01G339500 chr5B 85.731 841 97 14 4488 5316 106148870 106149699 0.000000e+00 867.0
27 TraesCS1A01G339500 chr5B 82.102 352 49 10 5388 5728 106149660 106150008 8.460000e-74 289.0
28 TraesCS1A01G339500 chr2D 94.488 508 24 2 3493 3998 99684745 99685250 0.000000e+00 780.0
29 TraesCS1A01G339500 chr2D 81.022 137 24 2 418 554 446314622 446314488 2.540000e-19 108.0
30 TraesCS1A01G339500 chr3D 94.748 476 25 0 3493 3968 560196302 560195827 0.000000e+00 741.0
31 TraesCS1A01G339500 chr3D 86.164 159 16 4 6515 6670 378032711 378032866 4.140000e-37 167.0
32 TraesCS1A01G339500 chr6B 93.133 233 15 1 56 287 22894002 22894234 2.300000e-89 340.0
33 TraesCS1A01G339500 chr6B 91.845 233 18 1 56 287 560641941 560642173 2.320000e-84 324.0
34 TraesCS1A01G339500 chr5D 93.103 232 16 0 56 287 45668010 45667779 2.300000e-89 340.0
35 TraesCS1A01G339500 chr2A 92.704 233 16 1 56 287 424511746 424511514 1.070000e-87 335.0
36 TraesCS1A01G339500 chr2A 84.739 249 34 4 306 552 615744206 615743960 5.170000e-61 246.0
37 TraesCS1A01G339500 chr4A 92.641 231 17 0 57 287 693284307 693284077 3.850000e-87 333.0
38 TraesCS1A01G339500 chr5A 91.597 238 19 1 55 291 519849555 519849792 1.790000e-85 327.0
39 TraesCS1A01G339500 chr3A 89.831 236 22 2 52 287 561059808 561060041 1.090000e-77 302.0
40 TraesCS1A01G339500 chr3A 88.321 137 10 4 6537 6670 502165845 502165978 6.920000e-35 159.0
41 TraesCS1A01G339500 chr3A 94.340 53 3 0 6599 6651 56592001 56591949 1.540000e-11 82.4
42 TraesCS1A01G339500 chr4D 86.111 252 30 5 305 554 370533032 370532784 3.970000e-67 267.0
43 TraesCS1A01G339500 chr7D 84.328 268 40 2 287 554 53333463 53333728 1.840000e-65 261.0
44 TraesCS1A01G339500 chr7A 86.207 174 24 0 381 554 85596504 85596677 8.830000e-44 189.0
45 TraesCS1A01G339500 chr3B 84.906 159 18 4 6515 6670 492611184 492611339 8.960000e-34 156.0
46 TraesCS1A01G339500 chr6D 78.495 186 37 3 368 552 26407736 26407919 1.180000e-22 119.0
47 TraesCS1A01G339500 chr2B 87.255 102 13 0 453 554 773900640 773900741 4.230000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G339500 chr1A 529665454 529672123 6669 True 12318.000000 12318 100.000000 1 6670 1 chr1A.!!$R2 6669
1 TraesCS1A01G339500 chr1D 431427127 431433204 6077 True 1420.757143 6626 94.601571 588 6670 7 chr1D.!!$R4 6082
2 TraesCS1A01G339500 chr1B 582545038 582551161 6123 True 1440.457143 6593 93.364143 678 6670 7 chr1B.!!$R2 5992
3 TraesCS1A01G339500 chr5B 106148870 106150008 1138 False 578.000000 867 83.916500 4488 5728 2 chr5B.!!$F1 1240
4 TraesCS1A01G339500 chr2D 99684745 99685250 505 False 780.000000 780 94.488000 3493 3998 1 chr2D.!!$F1 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
350 351 0.030369 GTATGACGTCCGTGGCTAGG 59.970 60.000 14.12 0.0 0.00 3.02 F
379 380 0.178973 TAGCTAGCATGACGCCCCTA 60.179 55.000 18.83 0.0 44.04 3.53 F
440 441 0.249322 GGCGCCATACTACATGTCGT 60.249 55.000 24.80 4.6 0.00 4.34 F
638 663 0.321830 TATCAAGCAGCAGCACAGCA 60.322 50.000 3.17 0.0 45.49 4.41 F
1589 1668 0.390860 TTGGAATGCGTTTGTTGGGG 59.609 50.000 0.00 0.0 0.00 4.96 F
1590 1669 0.468214 TGGAATGCGTTTGTTGGGGA 60.468 50.000 0.00 0.0 0.00 4.81 F
3214 3508 0.607217 CCAGAGTTGGTGCATCAGCA 60.607 55.000 16.64 0.0 41.55 4.41 F
4001 4297 1.358787 AGAATCAACCATGAAGCCCCA 59.641 47.619 0.00 0.0 39.49 4.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1536 1615 0.178767 ATGCAGATGCGAGCTTGGTA 59.821 50.000 2.37 0.00 45.83 3.25 R
1961 2048 0.178767 CATAGCCACCAGTGCTGCTA 59.821 55.000 10.03 10.03 39.91 3.49 R
1962 2049 1.077930 CATAGCCACCAGTGCTGCT 60.078 57.895 0.00 6.74 39.91 4.24 R
2491 2784 1.746470 GTGGGTGTACCTACCAATGC 58.254 55.000 6.30 0.00 41.12 3.56 R
3431 3725 0.387565 GGCCTTCTTGCAAACGGAAA 59.612 50.000 0.00 0.00 0.00 3.13 R
3581 3877 2.768527 AGAAGCAGCATAGCCAGAACTA 59.231 45.455 0.00 0.00 34.23 2.24 R
4082 4378 0.035630 AGCTGGGATGCTGTCTGAAC 60.036 55.000 0.00 0.00 42.33 3.18 R
5904 6223 0.107312 AGAGATGCTGCCGATTGCTT 60.107 50.000 0.00 0.00 42.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.389741 GCGTCTGCTGTGAAAATGG 57.610 52.632 0.00 0.00 38.39 3.16
21 22 0.109597 GCGTCTGCTGTGAAAATGGG 60.110 55.000 0.00 0.00 38.39 4.00
22 23 0.109597 CGTCTGCTGTGAAAATGGGC 60.110 55.000 0.00 0.00 0.00 5.36
23 24 0.961019 GTCTGCTGTGAAAATGGGCA 59.039 50.000 0.00 0.00 0.00 5.36
24 25 1.340889 GTCTGCTGTGAAAATGGGCAA 59.659 47.619 0.00 0.00 32.43 4.52
25 26 2.037901 TCTGCTGTGAAAATGGGCAAA 58.962 42.857 0.00 0.00 32.43 3.68
26 27 2.433604 TCTGCTGTGAAAATGGGCAAAA 59.566 40.909 0.00 0.00 32.43 2.44
27 28 2.545106 CTGCTGTGAAAATGGGCAAAAC 59.455 45.455 0.00 0.00 32.43 2.43
28 29 2.170187 TGCTGTGAAAATGGGCAAAACT 59.830 40.909 0.00 0.00 0.00 2.66
29 30 2.545106 GCTGTGAAAATGGGCAAAACTG 59.455 45.455 0.00 0.00 0.00 3.16
30 31 3.740764 GCTGTGAAAATGGGCAAAACTGA 60.741 43.478 0.00 0.00 0.00 3.41
31 32 4.634199 CTGTGAAAATGGGCAAAACTGAT 58.366 39.130 0.00 0.00 0.00 2.90
32 33 4.630111 TGTGAAAATGGGCAAAACTGATC 58.370 39.130 0.00 0.00 0.00 2.92
33 34 4.344679 TGTGAAAATGGGCAAAACTGATCT 59.655 37.500 0.00 0.00 0.00 2.75
34 35 5.163322 TGTGAAAATGGGCAAAACTGATCTT 60.163 36.000 0.00 0.00 0.00 2.40
35 36 5.759763 GTGAAAATGGGCAAAACTGATCTTT 59.240 36.000 0.00 0.00 0.00 2.52
36 37 6.928492 GTGAAAATGGGCAAAACTGATCTTTA 59.072 34.615 0.00 0.00 0.00 1.85
37 38 7.603784 GTGAAAATGGGCAAAACTGATCTTTAT 59.396 33.333 0.00 0.00 0.00 1.40
38 39 7.818930 TGAAAATGGGCAAAACTGATCTTTATC 59.181 33.333 0.00 0.00 0.00 1.75
39 40 7.486407 AAATGGGCAAAACTGATCTTTATCT 57.514 32.000 0.00 0.00 32.93 1.98
40 41 5.902613 TGGGCAAAACTGATCTTTATCTG 57.097 39.130 0.00 0.00 37.16 2.90
41 42 5.569355 TGGGCAAAACTGATCTTTATCTGA 58.431 37.500 0.00 0.00 35.60 3.27
42 43 6.009589 TGGGCAAAACTGATCTTTATCTGAA 58.990 36.000 0.00 0.00 35.60 3.02
43 44 6.493115 TGGGCAAAACTGATCTTTATCTGAAA 59.507 34.615 0.00 0.00 35.60 2.69
44 45 6.808704 GGGCAAAACTGATCTTTATCTGAAAC 59.191 38.462 0.00 0.00 35.60 2.78
45 46 6.808704 GGCAAAACTGATCTTTATCTGAAACC 59.191 38.462 0.00 0.00 35.60 3.27
46 47 7.309438 GGCAAAACTGATCTTTATCTGAAACCT 60.309 37.037 0.00 0.00 35.60 3.50
47 48 7.752686 GCAAAACTGATCTTTATCTGAAACCTC 59.247 37.037 0.00 0.00 35.60 3.85
48 49 8.786898 CAAAACTGATCTTTATCTGAAACCTCA 58.213 33.333 0.00 0.00 35.60 3.86
49 50 8.924511 AAACTGATCTTTATCTGAAACCTCAA 57.075 30.769 0.00 0.00 35.60 3.02
50 51 7.913674 ACTGATCTTTATCTGAAACCTCAAC 57.086 36.000 0.00 0.00 35.60 3.18
51 52 7.453393 ACTGATCTTTATCTGAAACCTCAACA 58.547 34.615 0.00 0.00 35.60 3.33
52 53 7.389053 ACTGATCTTTATCTGAAACCTCAACAC 59.611 37.037 0.00 0.00 35.60 3.32
53 54 7.223584 TGATCTTTATCTGAAACCTCAACACA 58.776 34.615 0.00 0.00 32.93 3.72
54 55 7.719193 TGATCTTTATCTGAAACCTCAACACAA 59.281 33.333 0.00 0.00 32.93 3.33
55 56 7.873719 TCTTTATCTGAAACCTCAACACAAA 57.126 32.000 0.00 0.00 0.00 2.83
56 57 7.930217 TCTTTATCTGAAACCTCAACACAAAG 58.070 34.615 0.00 0.00 0.00 2.77
57 58 6.633500 TTATCTGAAACCTCAACACAAAGG 57.367 37.500 0.00 0.00 38.70 3.11
58 59 3.287222 TCTGAAACCTCAACACAAAGGG 58.713 45.455 0.00 0.00 36.95 3.95
59 60 3.023832 CTGAAACCTCAACACAAAGGGT 58.976 45.455 0.00 0.00 36.95 4.34
60 61 4.080243 TCTGAAACCTCAACACAAAGGGTA 60.080 41.667 0.00 0.00 36.95 3.69
61 62 4.798882 TGAAACCTCAACACAAAGGGTAT 58.201 39.130 0.00 0.00 36.95 2.73
62 63 4.582656 TGAAACCTCAACACAAAGGGTATG 59.417 41.667 0.00 0.00 36.95 2.39
63 64 3.876309 ACCTCAACACAAAGGGTATGT 57.124 42.857 0.00 0.00 36.95 2.29
64 65 4.178956 ACCTCAACACAAAGGGTATGTT 57.821 40.909 0.00 0.00 36.95 2.71
65 66 4.542697 ACCTCAACACAAAGGGTATGTTT 58.457 39.130 0.00 0.00 36.95 2.83
66 67 4.340950 ACCTCAACACAAAGGGTATGTTTG 59.659 41.667 0.00 0.00 40.18 2.93
67 68 4.261994 CCTCAACACAAAGGGTATGTTTGG 60.262 45.833 1.05 0.00 38.90 3.28
68 69 4.282496 TCAACACAAAGGGTATGTTTGGT 58.718 39.130 1.05 0.00 38.90 3.67
69 70 4.712337 TCAACACAAAGGGTATGTTTGGTT 59.288 37.500 1.05 0.34 38.90 3.67
70 71 4.929819 ACACAAAGGGTATGTTTGGTTC 57.070 40.909 1.05 0.00 38.90 3.62
71 72 4.542697 ACACAAAGGGTATGTTTGGTTCT 58.457 39.130 1.05 0.00 38.90 3.01
72 73 4.959839 ACACAAAGGGTATGTTTGGTTCTT 59.040 37.500 1.05 0.00 38.90 2.52
73 74 5.163457 ACACAAAGGGTATGTTTGGTTCTTG 60.163 40.000 1.05 0.00 38.90 3.02
74 75 4.202212 ACAAAGGGTATGTTTGGTTCTTGC 60.202 41.667 1.05 0.00 38.90 4.01
75 76 2.525368 AGGGTATGTTTGGTTCTTGCC 58.475 47.619 0.00 0.00 0.00 4.52
76 77 2.110011 AGGGTATGTTTGGTTCTTGCCT 59.890 45.455 0.00 0.00 0.00 4.75
77 78 3.332485 AGGGTATGTTTGGTTCTTGCCTA 59.668 43.478 0.00 0.00 0.00 3.93
78 79 4.017499 AGGGTATGTTTGGTTCTTGCCTAT 60.017 41.667 0.00 0.00 0.00 2.57
79 80 4.097892 GGGTATGTTTGGTTCTTGCCTATG 59.902 45.833 0.00 0.00 0.00 2.23
80 81 4.097892 GGTATGTTTGGTTCTTGCCTATGG 59.902 45.833 0.00 0.00 0.00 2.74
113 114 6.961576 CCAATATTGGCTTGCCAATTATTTG 58.038 36.000 35.14 30.62 42.21 2.32
123 124 3.817709 CCAATTATTTGGCGTGGGATT 57.182 42.857 3.53 0.00 45.71 3.01
124 125 3.716601 CCAATTATTTGGCGTGGGATTC 58.283 45.455 3.53 0.00 45.71 2.52
125 126 3.492482 CCAATTATTTGGCGTGGGATTCC 60.492 47.826 3.53 0.00 45.71 3.01
126 127 2.516227 TTATTTGGCGTGGGATTCCA 57.484 45.000 4.80 0.00 41.58 3.53
127 128 2.516227 TATTTGGCGTGGGATTCCAA 57.484 45.000 4.80 0.00 46.04 3.53
128 129 0.894835 ATTTGGCGTGGGATTCCAAC 59.105 50.000 4.80 2.07 46.04 3.77
129 130 1.519751 TTTGGCGTGGGATTCCAACG 61.520 55.000 25.40 25.40 46.04 4.10
132 133 3.131478 CGTGGGATTCCAACGCCC 61.131 66.667 19.25 0.00 46.04 6.13
133 134 3.131478 GTGGGATTCCAACGCCCG 61.131 66.667 4.80 0.00 46.04 6.13
134 135 4.418328 TGGGATTCCAACGCCCGG 62.418 66.667 4.80 0.00 45.08 5.73
137 138 4.419921 GATTCCAACGCCCGGGGT 62.420 66.667 25.28 16.08 0.00 4.95
138 139 3.931190 GATTCCAACGCCCGGGGTT 62.931 63.158 25.28 21.23 39.22 4.11
139 140 2.540028 GATTCCAACGCCCGGGGTTA 62.540 60.000 25.28 10.17 36.59 2.85
140 141 2.546114 ATTCCAACGCCCGGGGTTAG 62.546 60.000 25.28 17.17 36.59 2.34
145 146 4.726304 CGCCCGGGGTTAGCCAAA 62.726 66.667 25.28 0.00 36.17 3.28
146 147 2.754254 GCCCGGGGTTAGCCAAAG 60.754 66.667 25.28 0.00 36.17 2.77
147 148 3.083386 CCCGGGGTTAGCCAAAGA 58.917 61.111 14.71 0.00 36.17 2.52
148 149 1.613061 CCCGGGGTTAGCCAAAGAT 59.387 57.895 14.71 0.00 36.17 2.40
149 150 0.033503 CCCGGGGTTAGCCAAAGATT 60.034 55.000 14.71 0.00 36.17 2.40
150 151 1.618616 CCCGGGGTTAGCCAAAGATTT 60.619 52.381 14.71 0.00 36.17 2.17
151 152 1.476488 CCGGGGTTAGCCAAAGATTTG 59.524 52.381 1.94 0.00 37.90 2.32
165 166 5.775686 CAAAGATTTGGCAAGAATCTGTGA 58.224 37.500 20.41 0.00 45.49 3.58
166 167 6.218019 CAAAGATTTGGCAAGAATCTGTGAA 58.782 36.000 20.41 0.00 45.49 3.18
167 168 5.640189 AGATTTGGCAAGAATCTGTGAAG 57.360 39.130 12.45 0.00 41.13 3.02
168 169 5.319453 AGATTTGGCAAGAATCTGTGAAGA 58.681 37.500 12.45 0.00 41.13 2.87
169 170 5.771666 AGATTTGGCAAGAATCTGTGAAGAA 59.228 36.000 12.45 0.00 41.13 2.52
170 171 5.850557 TTTGGCAAGAATCTGTGAAGAAA 57.149 34.783 0.00 0.00 0.00 2.52
171 172 5.443185 TTGGCAAGAATCTGTGAAGAAAG 57.557 39.130 0.00 0.00 0.00 2.62
172 173 3.254166 TGGCAAGAATCTGTGAAGAAAGC 59.746 43.478 0.00 0.00 0.00 3.51
173 174 3.254166 GGCAAGAATCTGTGAAGAAAGCA 59.746 43.478 0.00 0.00 0.00 3.91
174 175 4.261741 GGCAAGAATCTGTGAAGAAAGCAA 60.262 41.667 0.00 0.00 0.00 3.91
175 176 4.678742 GCAAGAATCTGTGAAGAAAGCAAC 59.321 41.667 0.00 0.00 0.00 4.17
176 177 5.734220 GCAAGAATCTGTGAAGAAAGCAACA 60.734 40.000 0.00 0.00 0.00 3.33
177 178 6.267817 CAAGAATCTGTGAAGAAAGCAACAA 58.732 36.000 0.00 0.00 0.00 2.83
178 179 6.645790 AGAATCTGTGAAGAAAGCAACAAT 57.354 33.333 0.00 0.00 0.00 2.71
179 180 6.444633 AGAATCTGTGAAGAAAGCAACAATG 58.555 36.000 0.00 0.00 0.00 2.82
180 181 4.572985 TCTGTGAAGAAAGCAACAATGG 57.427 40.909 0.00 0.00 0.00 3.16
181 182 4.206375 TCTGTGAAGAAAGCAACAATGGA 58.794 39.130 0.00 0.00 0.00 3.41
182 183 4.036734 TCTGTGAAGAAAGCAACAATGGAC 59.963 41.667 0.00 0.00 0.00 4.02
183 184 3.953612 TGTGAAGAAAGCAACAATGGACT 59.046 39.130 0.00 0.00 0.00 3.85
184 185 4.036734 TGTGAAGAAAGCAACAATGGACTC 59.963 41.667 0.00 0.00 0.00 3.36
185 186 4.036734 GTGAAGAAAGCAACAATGGACTCA 59.963 41.667 0.00 0.00 0.00 3.41
186 187 4.828939 TGAAGAAAGCAACAATGGACTCAT 59.171 37.500 0.00 0.00 34.56 2.90
187 188 5.302568 TGAAGAAAGCAACAATGGACTCATT 59.697 36.000 0.00 0.00 43.79 2.57
223 224 2.417719 GGCAACAAACCAAACAACACA 58.582 42.857 0.00 0.00 0.00 3.72
224 225 3.006247 GGCAACAAACCAAACAACACAT 58.994 40.909 0.00 0.00 0.00 3.21
225 226 4.184629 GGCAACAAACCAAACAACACATA 58.815 39.130 0.00 0.00 0.00 2.29
226 227 4.631813 GGCAACAAACCAAACAACACATAA 59.368 37.500 0.00 0.00 0.00 1.90
227 228 5.220567 GGCAACAAACCAAACAACACATAAG 60.221 40.000 0.00 0.00 0.00 1.73
228 229 5.220567 GCAACAAACCAAACAACACATAAGG 60.221 40.000 0.00 0.00 0.00 2.69
229 230 5.923733 ACAAACCAAACAACACATAAGGA 57.076 34.783 0.00 0.00 0.00 3.36
230 231 6.287589 ACAAACCAAACAACACATAAGGAA 57.712 33.333 0.00 0.00 0.00 3.36
231 232 6.883744 ACAAACCAAACAACACATAAGGAAT 58.116 32.000 0.00 0.00 0.00 3.01
232 233 7.334858 ACAAACCAAACAACACATAAGGAATT 58.665 30.769 0.00 0.00 0.00 2.17
233 234 7.826744 ACAAACCAAACAACACATAAGGAATTT 59.173 29.630 0.00 0.00 0.00 1.82
234 235 7.784633 AACCAAACAACACATAAGGAATTTG 57.215 32.000 0.00 0.00 0.00 2.32
235 236 7.118496 ACCAAACAACACATAAGGAATTTGA 57.882 32.000 0.00 0.00 0.00 2.69
236 237 6.983890 ACCAAACAACACATAAGGAATTTGAC 59.016 34.615 0.00 0.00 0.00 3.18
237 238 6.143758 CCAAACAACACATAAGGAATTTGACG 59.856 38.462 0.00 0.00 0.00 4.35
238 239 6.385649 AACAACACATAAGGAATTTGACGT 57.614 33.333 0.00 0.00 0.00 4.34
239 240 5.757886 ACAACACATAAGGAATTTGACGTG 58.242 37.500 0.00 0.00 0.00 4.49
240 241 5.529430 ACAACACATAAGGAATTTGACGTGA 59.471 36.000 0.00 0.00 0.00 4.35
241 242 5.607119 ACACATAAGGAATTTGACGTGAC 57.393 39.130 0.00 0.00 0.00 3.67
242 243 4.454504 ACACATAAGGAATTTGACGTGACC 59.545 41.667 0.00 0.00 0.00 4.02
243 244 4.454161 CACATAAGGAATTTGACGTGACCA 59.546 41.667 0.00 0.00 0.00 4.02
244 245 5.049060 CACATAAGGAATTTGACGTGACCAA 60.049 40.000 0.00 0.00 0.00 3.67
245 246 5.710099 ACATAAGGAATTTGACGTGACCAAT 59.290 36.000 0.00 0.00 0.00 3.16
246 247 6.882140 ACATAAGGAATTTGACGTGACCAATA 59.118 34.615 0.00 0.00 0.00 1.90
247 248 7.556275 ACATAAGGAATTTGACGTGACCAATAT 59.444 33.333 0.00 0.00 0.00 1.28
248 249 6.834168 AAGGAATTTGACGTGACCAATATT 57.166 33.333 0.00 0.00 0.00 1.28
249 250 6.834168 AGGAATTTGACGTGACCAATATTT 57.166 33.333 0.00 0.00 0.00 1.40
250 251 7.227049 AGGAATTTGACGTGACCAATATTTT 57.773 32.000 0.00 0.00 0.00 1.82
251 252 7.090173 AGGAATTTGACGTGACCAATATTTTG 58.910 34.615 0.00 0.00 0.00 2.44
265 266 7.042797 CCAATATTTTGGTAGGATGAGTTGG 57.957 40.000 6.76 0.00 46.27 3.77
266 267 6.833416 CCAATATTTTGGTAGGATGAGTTGGA 59.167 38.462 6.76 0.00 46.27 3.53
267 268 7.013655 CCAATATTTTGGTAGGATGAGTTGGAG 59.986 40.741 6.76 0.00 46.27 3.86
268 269 4.301072 TTTTGGTAGGATGAGTTGGAGG 57.699 45.455 0.00 0.00 0.00 4.30
269 270 2.642171 TGGTAGGATGAGTTGGAGGT 57.358 50.000 0.00 0.00 0.00 3.85
270 271 3.769189 TGGTAGGATGAGTTGGAGGTA 57.231 47.619 0.00 0.00 0.00 3.08
271 272 4.280789 TGGTAGGATGAGTTGGAGGTAT 57.719 45.455 0.00 0.00 0.00 2.73
272 273 5.412617 TGGTAGGATGAGTTGGAGGTATA 57.587 43.478 0.00 0.00 0.00 1.47
273 274 5.784023 TGGTAGGATGAGTTGGAGGTATAA 58.216 41.667 0.00 0.00 0.00 0.98
274 275 6.206787 TGGTAGGATGAGTTGGAGGTATAAA 58.793 40.000 0.00 0.00 0.00 1.40
275 276 6.099269 TGGTAGGATGAGTTGGAGGTATAAAC 59.901 42.308 0.00 0.00 0.00 2.01
288 289 4.875561 GGTATAAACCAAACAAGCCCAA 57.124 40.909 0.00 0.00 45.98 4.12
289 290 5.216614 GGTATAAACCAAACAAGCCCAAA 57.783 39.130 0.00 0.00 45.98 3.28
290 291 5.612351 GGTATAAACCAAACAAGCCCAAAA 58.388 37.500 0.00 0.00 45.98 2.44
291 292 5.467399 GGTATAAACCAAACAAGCCCAAAAC 59.533 40.000 0.00 0.00 45.98 2.43
292 293 2.017138 AACCAAACAAGCCCAAAACG 57.983 45.000 0.00 0.00 0.00 3.60
293 294 1.187087 ACCAAACAAGCCCAAAACGA 58.813 45.000 0.00 0.00 0.00 3.85
294 295 1.134936 ACCAAACAAGCCCAAAACGAC 60.135 47.619 0.00 0.00 0.00 4.34
295 296 1.566404 CAAACAAGCCCAAAACGACC 58.434 50.000 0.00 0.00 0.00 4.79
296 297 1.134965 CAAACAAGCCCAAAACGACCA 60.135 47.619 0.00 0.00 0.00 4.02
297 298 1.408969 AACAAGCCCAAAACGACCAT 58.591 45.000 0.00 0.00 0.00 3.55
298 299 2.279935 ACAAGCCCAAAACGACCATA 57.720 45.000 0.00 0.00 0.00 2.74
299 300 2.588620 ACAAGCCCAAAACGACCATAA 58.411 42.857 0.00 0.00 0.00 1.90
300 301 3.161866 ACAAGCCCAAAACGACCATAAT 58.838 40.909 0.00 0.00 0.00 1.28
301 302 3.576550 ACAAGCCCAAAACGACCATAATT 59.423 39.130 0.00 0.00 0.00 1.40
302 303 4.039852 ACAAGCCCAAAACGACCATAATTT 59.960 37.500 0.00 0.00 0.00 1.82
303 304 4.186856 AGCCCAAAACGACCATAATTTG 57.813 40.909 0.00 0.00 33.62 2.32
330 331 7.857734 AAAAATTCATGAAACGGTCCTTTTT 57.142 28.000 13.09 14.69 0.00 1.94
331 332 6.843069 AAATTCATGAAACGGTCCTTTTTG 57.157 33.333 13.09 0.00 0.00 2.44
332 333 4.993029 TTCATGAAACGGTCCTTTTTGT 57.007 36.364 5.45 0.00 0.00 2.83
333 334 6.642707 ATTCATGAAACGGTCCTTTTTGTA 57.357 33.333 13.09 0.00 0.00 2.41
334 335 6.642707 TTCATGAAACGGTCCTTTTTGTAT 57.357 33.333 5.45 0.00 0.00 2.29
335 336 6.007936 TCATGAAACGGTCCTTTTTGTATG 57.992 37.500 0.00 2.22 0.00 2.39
336 337 5.765677 TCATGAAACGGTCCTTTTTGTATGA 59.234 36.000 0.00 10.00 0.00 2.15
337 338 5.427036 TGAAACGGTCCTTTTTGTATGAC 57.573 39.130 0.00 0.00 0.00 3.06
338 339 4.024725 TGAAACGGTCCTTTTTGTATGACG 60.025 41.667 0.00 0.00 0.00 4.35
339 340 3.116079 ACGGTCCTTTTTGTATGACGT 57.884 42.857 0.00 0.00 0.00 4.34
340 341 3.062042 ACGGTCCTTTTTGTATGACGTC 58.938 45.455 9.11 9.11 0.00 4.34
341 342 2.414138 CGGTCCTTTTTGTATGACGTCC 59.586 50.000 14.12 0.00 0.00 4.79
342 343 2.414138 GGTCCTTTTTGTATGACGTCCG 59.586 50.000 14.12 0.00 0.00 4.79
343 344 3.062042 GTCCTTTTTGTATGACGTCCGT 58.938 45.455 14.12 4.34 0.00 4.69
344 345 3.061322 TCCTTTTTGTATGACGTCCGTG 58.939 45.455 14.12 0.00 0.00 4.94
345 346 2.158841 CCTTTTTGTATGACGTCCGTGG 59.841 50.000 14.12 0.00 0.00 4.94
346 347 1.149987 TTTTGTATGACGTCCGTGGC 58.850 50.000 14.12 0.00 0.00 5.01
347 348 0.319083 TTTGTATGACGTCCGTGGCT 59.681 50.000 14.12 0.00 0.00 4.75
348 349 1.175654 TTGTATGACGTCCGTGGCTA 58.824 50.000 14.12 0.00 0.00 3.93
349 350 0.736636 TGTATGACGTCCGTGGCTAG 59.263 55.000 14.12 0.00 0.00 3.42
350 351 0.030369 GTATGACGTCCGTGGCTAGG 59.970 60.000 14.12 0.00 0.00 3.02
351 352 1.105167 TATGACGTCCGTGGCTAGGG 61.105 60.000 14.12 1.76 0.00 3.53
352 353 4.509737 GACGTCCGTGGCTAGGGC 62.510 72.222 3.51 0.00 37.82 5.19
354 355 3.849951 CGTCCGTGGCTAGGGCAT 61.850 66.667 3.55 0.00 40.92 4.40
355 356 2.109181 GTCCGTGGCTAGGGCATC 59.891 66.667 3.55 0.00 40.92 3.91
356 357 2.364973 TCCGTGGCTAGGGCATCA 60.365 61.111 3.55 0.00 40.92 3.07
357 358 1.766059 TCCGTGGCTAGGGCATCAT 60.766 57.895 3.55 0.00 40.92 2.45
358 359 1.598962 CCGTGGCTAGGGCATCATG 60.599 63.158 0.00 0.00 40.92 3.07
359 360 2.256591 CGTGGCTAGGGCATCATGC 61.257 63.158 0.00 0.00 44.08 4.06
360 361 1.150081 GTGGCTAGGGCATCATGCT 59.850 57.895 10.11 0.00 44.28 3.79
361 362 0.397941 GTGGCTAGGGCATCATGCTA 59.602 55.000 10.11 0.00 44.28 3.49
362 363 0.689055 TGGCTAGGGCATCATGCTAG 59.311 55.000 10.11 5.56 44.28 3.42
363 364 0.676151 GGCTAGGGCATCATGCTAGC 60.676 60.000 18.43 18.43 42.74 3.42
364 365 0.324285 GCTAGGGCATCATGCTAGCT 59.676 55.000 19.08 0.00 41.27 3.32
365 366 1.552337 GCTAGGGCATCATGCTAGCTA 59.448 52.381 19.08 2.58 41.27 3.32
366 367 2.418471 GCTAGGGCATCATGCTAGCTAG 60.418 54.545 19.08 16.84 41.27 3.42
376 377 4.663444 CTAGCTAGCATGACGCCC 57.337 61.111 18.83 0.00 44.04 6.13
377 378 1.005630 CTAGCTAGCATGACGCCCC 60.006 63.158 18.83 0.00 44.04 5.80
378 379 1.457643 TAGCTAGCATGACGCCCCT 60.458 57.895 18.83 0.00 44.04 4.79
379 380 0.178973 TAGCTAGCATGACGCCCCTA 60.179 55.000 18.83 0.00 44.04 3.53
380 381 1.005630 GCTAGCATGACGCCCCTAG 60.006 63.158 10.63 0.00 44.04 3.02
381 382 1.668294 CTAGCATGACGCCCCTAGG 59.332 63.158 0.06 0.06 44.04 3.02
393 394 4.199804 CCTAGGCTAGGGCGTCAT 57.800 61.111 29.55 0.00 42.42 3.06
394 395 3.358554 CCTAGGCTAGGGCGTCATA 57.641 57.895 29.55 0.00 42.42 2.15
395 396 0.889306 CCTAGGCTAGGGCGTCATAC 59.111 60.000 29.55 0.00 42.42 2.39
396 397 1.548128 CCTAGGCTAGGGCGTCATACT 60.548 57.143 29.55 0.00 42.42 2.12
397 398 2.290768 CCTAGGCTAGGGCGTCATACTA 60.291 54.545 29.55 0.00 42.42 1.82
398 399 2.606751 AGGCTAGGGCGTCATACTAT 57.393 50.000 0.00 0.00 39.81 2.12
399 400 2.890814 AGGCTAGGGCGTCATACTATT 58.109 47.619 0.00 0.00 39.81 1.73
400 401 3.240302 AGGCTAGGGCGTCATACTATTT 58.760 45.455 0.00 0.00 39.81 1.40
401 402 3.006967 AGGCTAGGGCGTCATACTATTTG 59.993 47.826 0.00 0.00 39.81 2.32
402 403 3.326747 GCTAGGGCGTCATACTATTTGG 58.673 50.000 0.00 0.00 0.00 3.28
403 404 2.256117 AGGGCGTCATACTATTTGGC 57.744 50.000 0.00 0.00 0.00 4.52
404 405 1.488812 AGGGCGTCATACTATTTGGCA 59.511 47.619 0.00 0.00 0.00 4.92
405 406 2.106511 AGGGCGTCATACTATTTGGCAT 59.893 45.455 0.00 0.00 0.00 4.40
406 407 2.226437 GGGCGTCATACTATTTGGCATG 59.774 50.000 0.00 0.00 0.00 4.06
407 408 2.226437 GGCGTCATACTATTTGGCATGG 59.774 50.000 0.00 0.00 0.00 3.66
408 409 2.878406 GCGTCATACTATTTGGCATGGT 59.122 45.455 0.00 0.00 0.00 3.55
409 410 3.303990 GCGTCATACTATTTGGCATGGTG 60.304 47.826 0.00 0.00 0.00 4.17
410 411 3.876914 CGTCATACTATTTGGCATGGTGT 59.123 43.478 0.00 0.00 0.00 4.16
411 412 4.024893 CGTCATACTATTTGGCATGGTGTC 60.025 45.833 0.00 0.00 0.00 3.67
412 413 4.275936 GTCATACTATTTGGCATGGTGTCC 59.724 45.833 0.00 0.00 0.00 4.02
413 414 4.165950 TCATACTATTTGGCATGGTGTCCT 59.834 41.667 0.00 0.00 0.00 3.85
414 415 5.368230 TCATACTATTTGGCATGGTGTCCTA 59.632 40.000 0.00 0.00 0.00 2.94
415 416 4.584638 ACTATTTGGCATGGTGTCCTAA 57.415 40.909 0.00 0.00 0.00 2.69
416 417 4.526970 ACTATTTGGCATGGTGTCCTAAG 58.473 43.478 0.00 0.00 0.00 2.18
417 418 1.544724 TTTGGCATGGTGTCCTAAGC 58.455 50.000 0.00 0.00 0.00 3.09
418 419 0.323360 TTGGCATGGTGTCCTAAGCC 60.323 55.000 0.00 0.00 42.32 4.35
419 420 1.819632 GGCATGGTGTCCTAAGCCG 60.820 63.158 0.00 0.00 31.88 5.52
420 421 1.819632 GCATGGTGTCCTAAGCCGG 60.820 63.158 0.00 0.00 0.00 6.13
421 422 1.153168 CATGGTGTCCTAAGCCGGG 60.153 63.158 2.18 0.00 0.00 5.73
422 423 2.375345 ATGGTGTCCTAAGCCGGGG 61.375 63.158 2.18 0.00 0.00 5.73
423 424 4.484872 GGTGTCCTAAGCCGGGGC 62.485 72.222 2.18 0.18 42.33 5.80
433 434 4.982749 GCCGGGGCGCCATACTAC 62.983 72.222 30.85 9.47 0.00 2.73
434 435 3.542676 CCGGGGCGCCATACTACA 61.543 66.667 30.85 0.00 0.00 2.74
435 436 2.741092 CGGGGCGCCATACTACAT 59.259 61.111 30.85 0.00 0.00 2.29
436 437 1.667830 CGGGGCGCCATACTACATG 60.668 63.158 30.85 1.89 0.00 3.21
437 438 1.450211 GGGGCGCCATACTACATGT 59.550 57.895 30.85 2.69 0.00 3.21
438 439 0.602905 GGGGCGCCATACTACATGTC 60.603 60.000 30.85 5.46 0.00 3.06
439 440 0.944311 GGGCGCCATACTACATGTCG 60.944 60.000 30.85 0.00 0.00 4.35
440 441 0.249322 GGCGCCATACTACATGTCGT 60.249 55.000 24.80 4.60 0.00 4.34
441 442 1.567504 GCGCCATACTACATGTCGTT 58.432 50.000 8.46 0.00 0.00 3.85
442 443 2.544277 GGCGCCATACTACATGTCGTTA 60.544 50.000 24.80 0.00 0.00 3.18
443 444 2.470257 GCGCCATACTACATGTCGTTAC 59.530 50.000 8.46 0.00 0.00 2.50
444 445 3.047796 CGCCATACTACATGTCGTTACC 58.952 50.000 8.46 0.00 0.00 2.85
445 446 3.489568 CGCCATACTACATGTCGTTACCA 60.490 47.826 8.46 0.00 0.00 3.25
446 447 4.628074 GCCATACTACATGTCGTTACCAT 58.372 43.478 8.46 0.00 0.00 3.55
447 448 4.447724 GCCATACTACATGTCGTTACCATG 59.552 45.833 8.46 6.23 44.17 3.66
448 449 5.737922 GCCATACTACATGTCGTTACCATGA 60.738 44.000 8.46 0.00 41.78 3.07
449 450 5.690409 CCATACTACATGTCGTTACCATGAC 59.310 44.000 8.46 0.00 41.78 3.06
450 451 3.766151 ACTACATGTCGTTACCATGACG 58.234 45.455 0.00 0.00 41.78 4.35
451 452 2.736144 ACATGTCGTTACCATGACGT 57.264 45.000 8.23 0.00 41.78 4.34
452 453 2.602878 ACATGTCGTTACCATGACGTC 58.397 47.619 9.11 9.11 41.78 4.34
453 454 1.924524 CATGTCGTTACCATGACGTCC 59.075 52.381 14.12 0.00 41.78 4.79
454 455 1.250328 TGTCGTTACCATGACGTCCT 58.750 50.000 14.12 0.00 41.35 3.85
455 456 2.435422 TGTCGTTACCATGACGTCCTA 58.565 47.619 14.12 0.00 41.35 2.94
456 457 2.421073 TGTCGTTACCATGACGTCCTAG 59.579 50.000 14.12 3.59 41.35 3.02
457 458 1.402968 TCGTTACCATGACGTCCTAGC 59.597 52.381 14.12 0.00 41.08 3.42
458 459 1.535437 CGTTACCATGACGTCCTAGCC 60.535 57.143 14.12 0.00 35.88 3.93
459 460 1.117150 TTACCATGACGTCCTAGCCC 58.883 55.000 14.12 0.00 0.00 5.19
460 461 1.105167 TACCATGACGTCCTAGCCCG 61.105 60.000 14.12 0.00 0.00 6.13
461 462 2.417516 CATGACGTCCTAGCCCGG 59.582 66.667 14.12 0.00 0.00 5.73
462 463 2.838225 ATGACGTCCTAGCCCGGG 60.838 66.667 19.09 19.09 0.00 5.73
475 476 4.899239 CCGGGGCGTCATGCTCTC 62.899 72.222 0.00 0.00 46.29 3.20
476 477 3.842923 CGGGGCGTCATGCTCTCT 61.843 66.667 0.00 0.00 46.29 3.10
477 478 2.490148 CGGGGCGTCATGCTCTCTA 61.490 63.158 0.00 0.00 46.29 2.43
478 479 1.365633 GGGGCGTCATGCTCTCTAG 59.634 63.158 0.00 0.00 46.29 2.43
479 480 2.707529 GGGGCGTCATGCTCTCTAGC 62.708 65.000 0.00 0.00 46.29 3.42
489 490 3.264666 CTCTCTAGCATGTCGCCAC 57.735 57.895 0.00 0.00 44.04 5.01
490 491 0.457443 CTCTCTAGCATGTCGCCACA 59.543 55.000 0.00 0.00 44.04 4.17
491 492 0.457443 TCTCTAGCATGTCGCCACAG 59.543 55.000 0.00 0.00 44.04 3.66
492 493 1.150567 CTCTAGCATGTCGCCACAGC 61.151 60.000 0.00 0.00 44.04 4.40
503 504 4.700365 CCACAGCGCGAGACGTCA 62.700 66.667 19.50 0.00 46.11 4.35
504 505 2.504899 CACAGCGCGAGACGTCAT 60.505 61.111 19.50 2.45 46.11 3.06
505 506 2.504899 ACAGCGCGAGACGTCATG 60.505 61.111 19.50 10.54 46.11 3.07
506 507 3.906649 CAGCGCGAGACGTCATGC 61.907 66.667 19.50 19.04 46.11 4.06
507 508 4.419939 AGCGCGAGACGTCATGCA 62.420 61.111 25.24 0.00 46.11 3.96
508 509 3.478394 GCGCGAGACGTCATGCAA 61.478 61.111 25.24 0.00 46.11 4.08
509 510 3.010585 GCGCGAGACGTCATGCAAA 62.011 57.895 25.24 0.00 46.11 3.68
510 511 1.491127 CGCGAGACGTCATGCAAAA 59.509 52.632 25.24 0.00 36.87 2.44
511 512 0.517132 CGCGAGACGTCATGCAAAAG 60.517 55.000 25.24 10.32 36.87 2.27
512 513 0.790207 GCGAGACGTCATGCAAAAGA 59.210 50.000 22.33 0.00 0.00 2.52
513 514 1.194547 GCGAGACGTCATGCAAAAGAA 59.805 47.619 22.33 0.00 0.00 2.52
514 515 2.723010 GCGAGACGTCATGCAAAAGAAG 60.723 50.000 22.33 0.00 0.00 2.85
515 516 2.731451 CGAGACGTCATGCAAAAGAAGA 59.269 45.455 19.50 0.00 0.00 2.87
516 517 3.422343 CGAGACGTCATGCAAAAGAAGAC 60.422 47.826 19.50 0.00 0.00 3.01
517 518 2.808543 AGACGTCATGCAAAAGAAGACC 59.191 45.455 19.50 0.00 0.00 3.85
518 519 2.548057 GACGTCATGCAAAAGAAGACCA 59.452 45.455 11.55 0.00 0.00 4.02
519 520 3.149196 ACGTCATGCAAAAGAAGACCAT 58.851 40.909 0.00 0.00 0.00 3.55
520 521 3.569701 ACGTCATGCAAAAGAAGACCATT 59.430 39.130 0.00 0.00 0.00 3.16
521 522 4.037923 ACGTCATGCAAAAGAAGACCATTT 59.962 37.500 0.00 0.00 0.00 2.32
522 523 4.618489 CGTCATGCAAAAGAAGACCATTTC 59.382 41.667 0.00 0.00 0.00 2.17
523 524 5.531634 GTCATGCAAAAGAAGACCATTTCA 58.468 37.500 0.00 0.00 0.00 2.69
524 525 6.161381 GTCATGCAAAAGAAGACCATTTCAT 58.839 36.000 0.00 0.00 0.00 2.57
525 526 6.090358 GTCATGCAAAAGAAGACCATTTCATG 59.910 38.462 0.00 0.00 0.00 3.07
526 527 5.787953 TGCAAAAGAAGACCATTTCATGA 57.212 34.783 0.00 0.00 0.00 3.07
527 528 6.159299 TGCAAAAGAAGACCATTTCATGAA 57.841 33.333 3.38 3.38 0.00 2.57
528 529 6.580788 TGCAAAAGAAGACCATTTCATGAAA 58.419 32.000 22.52 22.52 34.46 2.69
529 530 7.218614 TGCAAAAGAAGACCATTTCATGAAAT 58.781 30.769 24.83 24.83 41.33 2.17
530 531 8.366401 TGCAAAAGAAGACCATTTCATGAAATA 58.634 29.630 28.61 7.80 38.84 1.40
531 532 9.374838 GCAAAAGAAGACCATTTCATGAAATAT 57.625 29.630 28.61 20.94 38.84 1.28
564 565 6.775594 AGGATTATTTTGTCAGGTAAAGGC 57.224 37.500 0.00 0.00 0.00 4.35
565 566 5.656859 AGGATTATTTTGTCAGGTAAAGGCC 59.343 40.000 0.00 0.00 0.00 5.19
566 567 5.420739 GGATTATTTTGTCAGGTAAAGGCCA 59.579 40.000 5.01 0.00 0.00 5.36
567 568 5.975693 TTATTTTGTCAGGTAAAGGCCAG 57.024 39.130 5.01 0.00 0.00 4.85
568 569 3.586470 TTTTGTCAGGTAAAGGCCAGA 57.414 42.857 5.01 0.00 0.00 3.86
569 570 3.806949 TTTGTCAGGTAAAGGCCAGAT 57.193 42.857 5.01 0.00 0.00 2.90
570 571 3.806949 TTGTCAGGTAAAGGCCAGATT 57.193 42.857 5.01 0.00 0.00 2.40
571 572 3.806949 TGTCAGGTAAAGGCCAGATTT 57.193 42.857 5.01 0.00 0.00 2.17
572 573 3.420893 TGTCAGGTAAAGGCCAGATTTG 58.579 45.455 5.01 0.00 0.00 2.32
573 574 3.181434 TGTCAGGTAAAGGCCAGATTTGT 60.181 43.478 5.01 0.00 0.00 2.83
574 575 3.826729 GTCAGGTAAAGGCCAGATTTGTT 59.173 43.478 5.01 0.00 0.00 2.83
575 576 4.280929 GTCAGGTAAAGGCCAGATTTGTTT 59.719 41.667 5.01 0.00 0.00 2.83
576 577 5.475564 GTCAGGTAAAGGCCAGATTTGTTTA 59.524 40.000 5.01 0.00 0.00 2.01
577 578 6.152831 GTCAGGTAAAGGCCAGATTTGTTTAT 59.847 38.462 5.01 0.00 0.00 1.40
578 579 6.723977 TCAGGTAAAGGCCAGATTTGTTTATT 59.276 34.615 5.01 0.00 0.00 1.40
579 580 7.234577 TCAGGTAAAGGCCAGATTTGTTTATTT 59.765 33.333 5.01 0.00 0.00 1.40
580 581 7.877612 CAGGTAAAGGCCAGATTTGTTTATTTT 59.122 33.333 5.01 0.00 0.00 1.82
581 582 7.877612 AGGTAAAGGCCAGATTTGTTTATTTTG 59.122 33.333 5.01 0.00 0.00 2.44
582 583 7.875554 GGTAAAGGCCAGATTTGTTTATTTTGA 59.124 33.333 5.01 0.00 0.00 2.69
583 584 7.728847 AAAGGCCAGATTTGTTTATTTTGAC 57.271 32.000 5.01 0.00 0.00 3.18
584 585 5.469479 AGGCCAGATTTGTTTATTTTGACG 58.531 37.500 5.01 0.00 0.00 4.35
585 586 4.091365 GGCCAGATTTGTTTATTTTGACGC 59.909 41.667 0.00 0.00 0.00 5.19
586 587 4.201485 GCCAGATTTGTTTATTTTGACGCG 60.201 41.667 3.53 3.53 0.00 6.01
635 660 1.746787 CCATTATCAAGCAGCAGCACA 59.253 47.619 3.17 0.00 45.49 4.57
637 662 0.806868 TTATCAAGCAGCAGCACAGC 59.193 50.000 3.17 0.00 45.49 4.40
638 663 0.321830 TATCAAGCAGCAGCACAGCA 60.322 50.000 3.17 0.00 45.49 4.41
639 664 1.863662 ATCAAGCAGCAGCACAGCAC 61.864 55.000 3.17 0.00 45.49 4.40
640 665 2.203308 AAGCAGCAGCACAGCACT 60.203 55.556 3.17 0.00 45.49 4.40
641 666 2.552819 AAGCAGCAGCACAGCACTG 61.553 57.895 3.17 7.44 45.49 3.66
643 668 2.944429 CAGCAGCACAGCACTGAC 59.056 61.111 4.31 0.00 37.23 3.51
645 670 1.597302 AGCAGCACAGCACTGACAG 60.597 57.895 4.31 0.00 37.32 3.51
646 671 2.944429 CAGCACAGCACTGACAGC 59.056 61.111 4.31 5.63 37.32 4.40
676 732 8.760103 TTTACTCCTTGTTTTGTTTTGTTACC 57.240 30.769 0.00 0.00 0.00 2.85
693 749 1.002017 CCTTTGCACCCATCCCCAT 59.998 57.895 0.00 0.00 0.00 4.00
759 815 2.740055 CTGCCTCGCACTGTCACC 60.740 66.667 0.00 0.00 33.79 4.02
766 822 3.044305 GCACTGTCACCTGTCGCC 61.044 66.667 0.00 0.00 0.00 5.54
882 945 0.616111 GCTCCTCTCTTGGGTCTCCA 60.616 60.000 0.00 0.00 42.25 3.86
917 982 1.000771 TCCACTCCTCTCCTCACCG 60.001 63.158 0.00 0.00 0.00 4.94
1079 1147 1.004862 CCTGAACTCCTTTTCCCTCCC 59.995 57.143 0.00 0.00 0.00 4.30
1142 1213 5.506982 GCTCTGATGCTGTTCTTTCTGTTTT 60.507 40.000 0.00 0.00 0.00 2.43
1160 1233 2.388310 TTGTGTGTGTTCTGAACGGA 57.612 45.000 15.18 1.96 0.00 4.69
1313 1386 2.579787 GCGGACGACATGGACGAG 60.580 66.667 18.41 11.21 34.70 4.18
1415 1488 2.883621 GACGACGGGAGGAAGGTC 59.116 66.667 0.00 0.00 0.00 3.85
1530 1609 4.430007 GAAAAAGGTGCGGTTTTTCTTCT 58.570 39.130 17.17 0.00 44.85 2.85
1531 1610 5.450826 GGAAAAAGGTGCGGTTTTTCTTCTA 60.451 40.000 20.86 0.00 46.35 2.10
1532 1611 4.563337 AAAGGTGCGGTTTTTCTTCTAC 57.437 40.909 0.00 0.00 0.00 2.59
1533 1612 3.487120 AGGTGCGGTTTTTCTTCTACT 57.513 42.857 0.00 0.00 0.00 2.57
1534 1613 3.816994 AGGTGCGGTTTTTCTTCTACTT 58.183 40.909 0.00 0.00 0.00 2.24
1535 1614 3.813724 AGGTGCGGTTTTTCTTCTACTTC 59.186 43.478 0.00 0.00 0.00 3.01
1536 1615 3.813724 GGTGCGGTTTTTCTTCTACTTCT 59.186 43.478 0.00 0.00 0.00 2.85
1563 1642 1.600957 CTCGCATCTGCATTACTTGGG 59.399 52.381 2.72 0.00 42.21 4.12
1589 1668 0.390860 TTGGAATGCGTTTGTTGGGG 59.609 50.000 0.00 0.00 0.00 4.96
1590 1669 0.468214 TGGAATGCGTTTGTTGGGGA 60.468 50.000 0.00 0.00 0.00 4.81
1591 1670 0.894835 GGAATGCGTTTGTTGGGGAT 59.105 50.000 0.00 0.00 0.00 3.85
1593 1672 2.693074 GGAATGCGTTTGTTGGGGATAT 59.307 45.455 0.00 0.00 0.00 1.63
1596 1675 2.520069 TGCGTTTGTTGGGGATATTGT 58.480 42.857 0.00 0.00 0.00 2.71
1597 1676 2.230025 TGCGTTTGTTGGGGATATTGTG 59.770 45.455 0.00 0.00 0.00 3.33
1682 1766 3.484407 AGAAGTGATCTTGCAAGCAGTT 58.516 40.909 21.99 21.10 33.39 3.16
1724 1808 2.620585 GGCTTGCCAGGAAGATTGTATC 59.379 50.000 6.79 0.00 0.00 2.24
1744 1828 2.429250 TCGAGCGGATTAACCTTCATCA 59.571 45.455 0.00 0.00 36.31 3.07
1784 1868 5.514274 CAGATAGTTTCTGTCTCCTCCTC 57.486 47.826 2.65 0.00 45.79 3.71
1785 1869 4.340950 CAGATAGTTTCTGTCTCCTCCTCC 59.659 50.000 2.65 0.00 45.79 4.30
1786 1870 4.231890 AGATAGTTTCTGTCTCCTCCTCCT 59.768 45.833 0.00 0.00 31.79 3.69
1862 1946 2.025359 CTTTCGTCGCTTCGGCATCC 62.025 60.000 0.00 0.00 41.88 3.51
2166 2253 1.177401 GCTAGGGTTTTGGGCTTCAG 58.823 55.000 0.00 0.00 0.00 3.02
2223 2310 2.445682 TTAGGTGCTTGTGGTGGTTT 57.554 45.000 0.00 0.00 0.00 3.27
2224 2311 3.579534 TTAGGTGCTTGTGGTGGTTTA 57.420 42.857 0.00 0.00 0.00 2.01
2267 2354 4.022849 GCTGCTCTTGTCCTTGTAATTGTT 60.023 41.667 0.00 0.00 0.00 2.83
2299 2386 7.288560 AGATAAATCAGATCTGACATGCCTTT 58.711 34.615 27.37 22.16 43.11 3.11
2301 2388 3.986996 TCAGATCTGACATGCCTTTGA 57.013 42.857 21.67 0.00 34.14 2.69
2312 2604 3.068590 ACATGCCTTTGAGTGTTTTCCTG 59.931 43.478 0.00 0.00 0.00 3.86
2315 2607 3.882888 TGCCTTTGAGTGTTTTCCTGTAG 59.117 43.478 0.00 0.00 0.00 2.74
2461 2754 6.731919 TCCCTTACTTCCTGATAAACCAGTAA 59.268 38.462 0.00 0.00 32.43 2.24
2483 2776 2.875296 TGGCCAAAGCTTCATACTTGT 58.125 42.857 0.61 0.00 39.73 3.16
2491 2784 5.663795 AAGCTTCATACTTGTATCATGCG 57.336 39.130 0.00 0.00 0.00 4.73
2521 2814 2.636403 GGTACACCCACCTACTCAACTT 59.364 50.000 0.00 0.00 35.55 2.66
2536 2829 2.159824 TCAACTTTGTCGCAAAACGTCA 59.840 40.909 0.00 0.00 44.19 4.35
2537 2830 3.105203 CAACTTTGTCGCAAAACGTCAT 58.895 40.909 0.00 0.00 44.19 3.06
2714 3008 6.798427 TGTGAAGGCTATCTCACTTAGAAT 57.202 37.500 16.41 0.00 37.89 2.40
2806 3100 6.838090 TCCCAATTATTTCAAGATGCCATACA 59.162 34.615 0.00 0.00 0.00 2.29
2819 3113 3.084039 TGCCATACAAAAGAGGAAGCTG 58.916 45.455 0.00 0.00 0.00 4.24
2938 3232 3.881688 CAGAAGGCTATGGAGAATGGTTG 59.118 47.826 0.00 0.00 0.00 3.77
3181 3475 4.285020 TCTCAGGTAGTCAATGATCAGCT 58.715 43.478 0.09 0.00 0.00 4.24
3214 3508 0.607217 CCAGAGTTGGTGCATCAGCA 60.607 55.000 16.64 0.00 41.55 4.41
3325 3619 5.639506 CACTTACCAAACCTGTGTATCTGAG 59.360 44.000 0.00 0.00 0.00 3.35
3431 3725 3.146066 TCAAAAGTCTGCTGGCGTTAAT 58.854 40.909 0.00 0.00 0.00 1.40
3566 3862 7.786943 AGACCAGAATATCTTATGAGAACTCCA 59.213 37.037 0.00 0.00 35.07 3.86
3581 3877 3.959495 ACTCCATTGCCACATCCTTAT 57.041 42.857 0.00 0.00 0.00 1.73
3663 3959 6.375455 TCTTCAGGAAAGGTTGATTGCTAATC 59.625 38.462 0.00 0.00 35.71 1.75
3740 4036 4.949856 AGCAATATAAACACCTCAACAGGG 59.050 41.667 0.00 0.00 45.53 4.45
3980 4276 4.406649 ACTTCCTTGGATTATGCCCATTTG 59.593 41.667 0.00 0.00 33.04 2.32
4001 4297 1.358787 AGAATCAACCATGAAGCCCCA 59.641 47.619 0.00 0.00 39.49 4.96
4093 4389 1.278985 CAGTATGGGGTTCAGACAGCA 59.721 52.381 0.00 0.00 39.87 4.41
4247 4543 2.551459 GTCACTTGAGATGCAAAGCTGT 59.449 45.455 0.00 0.00 35.74 4.40
4370 4666 3.222603 AGAAAACTGTGGTCCATGTTCC 58.777 45.455 11.90 8.39 0.00 3.62
4405 4701 2.999355 GAGCTGAAGATCGTTGCTTTCT 59.001 45.455 10.28 0.00 33.83 2.52
4414 4710 1.626321 TCGTTGCTTTCTGGGGATGTA 59.374 47.619 0.00 0.00 0.00 2.29
4582 4883 5.050363 GCAAAAGTAATCAGAGTCGTCAACA 60.050 40.000 0.00 0.00 0.00 3.33
4657 4958 1.919816 TCAGACTGGGGCATCAGCA 60.920 57.895 1.81 0.00 44.61 4.41
4905 5206 1.162181 TGTTCAGAGCACTGCTGCAC 61.162 55.000 8.69 0.00 46.97 4.57
4940 5241 4.411256 AACAAAGTTTACCTCACTCCGA 57.589 40.909 0.00 0.00 0.00 4.55
4965 5266 0.394899 GCCCCCTTCAATGGTCTCTG 60.395 60.000 0.00 0.00 0.00 3.35
5013 5314 1.542108 GGCCTCATGGATCTACTGCAC 60.542 57.143 0.00 0.00 34.57 4.57
5116 5417 1.274447 GAAACAGGCCACCGTAGTAGT 59.726 52.381 5.01 0.00 0.00 2.73
5246 5551 1.134491 CGAAAGGACCTAAATCCGCCT 60.134 52.381 0.00 0.00 44.22 5.52
5693 6002 1.141254 TGCAGAGTTTAACCGTTCCCA 59.859 47.619 0.00 0.00 0.00 4.37
5734 6053 4.024809 CGTCGTCATCAGACTAGCTAATCA 60.025 45.833 4.82 0.00 42.73 2.57
5741 6060 8.306038 GTCATCAGACTAGCTAATCATGAAGAT 58.694 37.037 4.82 0.00 41.64 2.40
5842 6161 1.920610 TATCGCTAGCCCTTCCCTAC 58.079 55.000 9.66 0.00 0.00 3.18
5843 6162 0.188834 ATCGCTAGCCCTTCCCTACT 59.811 55.000 9.66 0.00 0.00 2.57
5844 6163 0.755698 TCGCTAGCCCTTCCCTACTG 60.756 60.000 9.66 0.00 0.00 2.74
5845 6164 1.043673 CGCTAGCCCTTCCCTACTGT 61.044 60.000 9.66 0.00 0.00 3.55
5846 6165 1.205055 GCTAGCCCTTCCCTACTGTT 58.795 55.000 2.29 0.00 0.00 3.16
5847 6166 1.134371 GCTAGCCCTTCCCTACTGTTG 60.134 57.143 2.29 0.00 0.00 3.33
5867 6186 6.442952 TGTTGTTGTTGTTGTAATATGCTCC 58.557 36.000 0.00 0.00 0.00 4.70
6031 6351 7.148272 CCAACTTTTCATGTTGAAACCATTGTT 60.148 33.333 8.01 2.11 45.03 2.83
6035 6355 7.678947 TTTCATGTTGAAACCATTGTTGTTT 57.321 28.000 0.00 0.00 41.02 2.83
6048 6368 6.128688 ACCATTGTTGTTTGTTTGTTTTCGAG 60.129 34.615 0.00 0.00 0.00 4.04
6054 6374 3.953874 TTGTTTGTTTTCGAGCGATCA 57.046 38.095 0.00 0.00 0.00 2.92
6057 6377 4.463209 TGTTTGTTTTCGAGCGATCAATC 58.537 39.130 0.00 1.59 0.00 2.67
6086 6406 1.821136 CCCTGCCTTTTCATCTTGGTC 59.179 52.381 0.00 0.00 0.00 4.02
6115 6435 2.571653 AGTTTCAGTGCTGCCATAGGTA 59.428 45.455 0.00 0.00 0.00 3.08
6163 6483 9.346725 GAAAATCTGTTATTTTCCTCATGTGAC 57.653 33.333 10.66 0.00 40.34 3.67
6179 6499 0.840617 TGACTTTGGCAGTGGTGGTA 59.159 50.000 0.00 0.00 35.01 3.25
6246 6580 5.477984 TGCAGACTAAATTCTTCCAGCAAAT 59.522 36.000 0.00 0.00 0.00 2.32
6387 6723 5.010719 TGAACTGAGTAAGAGGGTACAGTTG 59.989 44.000 13.61 0.00 44.67 3.16
6388 6724 3.833070 ACTGAGTAAGAGGGTACAGTTGG 59.167 47.826 0.00 0.00 35.52 3.77
6389 6725 3.833070 CTGAGTAAGAGGGTACAGTTGGT 59.167 47.826 0.00 0.00 0.00 3.67
6426 6762 4.963953 GCAAACGTATCATCTTGTATGTGC 59.036 41.667 0.00 0.00 0.00 4.57
6437 6773 0.970640 TGTATGTGCTGGTACACCGT 59.029 50.000 0.00 0.00 39.93 4.83
6458 6794 8.939929 CACCGTAGAATCAGAATTATGCATATT 58.060 33.333 7.36 0.74 0.00 1.28
6526 6865 4.473520 GCGGGCTAGAGGCTTGCA 62.474 66.667 13.24 0.00 39.94 4.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.109597 CCCATTTTCACAGCAGACGC 60.110 55.000 0.00 0.00 38.99 5.19
3 4 0.109597 GCCCATTTTCACAGCAGACG 60.110 55.000 0.00 0.00 0.00 4.18
4 5 0.961019 TGCCCATTTTCACAGCAGAC 59.039 50.000 0.00 0.00 0.00 3.51
5 6 1.702182 TTGCCCATTTTCACAGCAGA 58.298 45.000 0.00 0.00 34.45 4.26
6 7 2.529780 TTTGCCCATTTTCACAGCAG 57.470 45.000 0.00 0.00 34.45 4.24
7 8 2.170187 AGTTTTGCCCATTTTCACAGCA 59.830 40.909 0.00 0.00 0.00 4.41
8 9 2.545106 CAGTTTTGCCCATTTTCACAGC 59.455 45.455 0.00 0.00 0.00 4.40
9 10 4.057406 TCAGTTTTGCCCATTTTCACAG 57.943 40.909 0.00 0.00 0.00 3.66
10 11 4.344679 AGATCAGTTTTGCCCATTTTCACA 59.655 37.500 0.00 0.00 0.00 3.58
11 12 4.886579 AGATCAGTTTTGCCCATTTTCAC 58.113 39.130 0.00 0.00 0.00 3.18
12 13 5.549742 AAGATCAGTTTTGCCCATTTTCA 57.450 34.783 0.00 0.00 0.00 2.69
13 14 8.037166 AGATAAAGATCAGTTTTGCCCATTTTC 58.963 33.333 0.00 0.00 34.17 2.29
14 15 7.820872 CAGATAAAGATCAGTTTTGCCCATTTT 59.179 33.333 0.00 0.00 34.17 1.82
15 16 7.178983 TCAGATAAAGATCAGTTTTGCCCATTT 59.821 33.333 0.00 0.00 34.17 2.32
16 17 6.664816 TCAGATAAAGATCAGTTTTGCCCATT 59.335 34.615 0.00 0.00 34.17 3.16
17 18 6.189859 TCAGATAAAGATCAGTTTTGCCCAT 58.810 36.000 0.00 0.00 34.17 4.00
18 19 5.569355 TCAGATAAAGATCAGTTTTGCCCA 58.431 37.500 0.00 0.00 34.17 5.36
19 20 6.515272 TTCAGATAAAGATCAGTTTTGCCC 57.485 37.500 0.00 0.00 34.17 5.36
20 21 6.808704 GGTTTCAGATAAAGATCAGTTTTGCC 59.191 38.462 0.00 0.00 34.17 4.52
21 22 7.597386 AGGTTTCAGATAAAGATCAGTTTTGC 58.403 34.615 0.00 0.00 34.17 3.68
22 23 8.786898 TGAGGTTTCAGATAAAGATCAGTTTTG 58.213 33.333 0.00 0.00 34.17 2.44
23 24 8.924511 TGAGGTTTCAGATAAAGATCAGTTTT 57.075 30.769 0.00 0.00 34.17 2.43
24 25 8.787852 GTTGAGGTTTCAGATAAAGATCAGTTT 58.212 33.333 0.00 0.00 34.15 2.66
25 26 7.939039 TGTTGAGGTTTCAGATAAAGATCAGTT 59.061 33.333 0.00 0.00 34.15 3.16
26 27 7.389053 GTGTTGAGGTTTCAGATAAAGATCAGT 59.611 37.037 0.00 0.00 34.15 3.41
27 28 7.388776 TGTGTTGAGGTTTCAGATAAAGATCAG 59.611 37.037 0.00 0.00 34.15 2.90
28 29 7.223584 TGTGTTGAGGTTTCAGATAAAGATCA 58.776 34.615 0.00 0.00 34.15 2.92
29 30 7.672983 TGTGTTGAGGTTTCAGATAAAGATC 57.327 36.000 0.00 0.00 34.15 2.75
30 31 8.463930 TTTGTGTTGAGGTTTCAGATAAAGAT 57.536 30.769 0.00 0.00 34.15 2.40
31 32 7.013274 CCTTTGTGTTGAGGTTTCAGATAAAGA 59.987 37.037 0.00 0.00 32.94 2.52
32 33 7.141363 CCTTTGTGTTGAGGTTTCAGATAAAG 58.859 38.462 0.00 0.00 34.15 1.85
33 34 6.040391 CCCTTTGTGTTGAGGTTTCAGATAAA 59.960 38.462 0.00 0.00 34.15 1.40
34 35 5.534654 CCCTTTGTGTTGAGGTTTCAGATAA 59.465 40.000 0.00 0.00 34.15 1.75
35 36 5.070001 CCCTTTGTGTTGAGGTTTCAGATA 58.930 41.667 0.00 0.00 34.15 1.98
36 37 3.891366 CCCTTTGTGTTGAGGTTTCAGAT 59.109 43.478 0.00 0.00 34.15 2.90
37 38 3.287222 CCCTTTGTGTTGAGGTTTCAGA 58.713 45.455 0.00 0.00 34.15 3.27
38 39 3.023832 ACCCTTTGTGTTGAGGTTTCAG 58.976 45.455 0.00 0.00 34.15 3.02
39 40 3.094484 ACCCTTTGTGTTGAGGTTTCA 57.906 42.857 0.00 0.00 0.00 2.69
40 41 4.583073 ACATACCCTTTGTGTTGAGGTTTC 59.417 41.667 0.00 0.00 31.89 2.78
41 42 4.542697 ACATACCCTTTGTGTTGAGGTTT 58.457 39.130 0.00 0.00 31.89 3.27
42 43 4.178956 ACATACCCTTTGTGTTGAGGTT 57.821 40.909 0.00 0.00 31.89 3.50
43 44 3.876309 ACATACCCTTTGTGTTGAGGT 57.124 42.857 0.00 0.00 34.52 3.85
44 45 4.261994 CCAAACATACCCTTTGTGTTGAGG 60.262 45.833 0.00 0.00 36.31 3.86
45 46 4.340950 ACCAAACATACCCTTTGTGTTGAG 59.659 41.667 0.00 0.00 36.31 3.02
46 47 4.282496 ACCAAACATACCCTTTGTGTTGA 58.718 39.130 0.00 0.00 36.31 3.18
47 48 4.664150 ACCAAACATACCCTTTGTGTTG 57.336 40.909 0.00 0.00 36.31 3.33
48 49 4.959839 AGAACCAAACATACCCTTTGTGTT 59.040 37.500 0.00 0.00 37.66 3.32
49 50 4.542697 AGAACCAAACATACCCTTTGTGT 58.457 39.130 0.00 0.00 0.00 3.72
50 51 5.288804 CAAGAACCAAACATACCCTTTGTG 58.711 41.667 0.00 0.00 0.00 3.33
51 52 4.202212 GCAAGAACCAAACATACCCTTTGT 60.202 41.667 0.00 0.00 0.00 2.83
52 53 4.306600 GCAAGAACCAAACATACCCTTTG 58.693 43.478 0.00 0.00 0.00 2.77
53 54 3.323691 GGCAAGAACCAAACATACCCTTT 59.676 43.478 0.00 0.00 0.00 3.11
54 55 2.897326 GGCAAGAACCAAACATACCCTT 59.103 45.455 0.00 0.00 0.00 3.95
55 56 2.110011 AGGCAAGAACCAAACATACCCT 59.890 45.455 0.00 0.00 0.00 4.34
56 57 2.525368 AGGCAAGAACCAAACATACCC 58.475 47.619 0.00 0.00 0.00 3.69
57 58 4.097892 CCATAGGCAAGAACCAAACATACC 59.902 45.833 0.00 0.00 0.00 2.73
58 59 5.248870 CCATAGGCAAGAACCAAACATAC 57.751 43.478 0.00 0.00 0.00 2.39
80 81 1.744014 CCAATATTGGCAGGGCAGC 59.256 57.895 21.32 0.00 42.21 5.25
104 105 3.131933 TGGAATCCCACGCCAAATAATTG 59.868 43.478 0.00 0.00 37.58 2.32
105 106 3.370104 TGGAATCCCACGCCAAATAATT 58.630 40.909 0.00 0.00 37.58 1.40
106 107 3.025322 TGGAATCCCACGCCAAATAAT 57.975 42.857 0.00 0.00 37.58 1.28
107 108 2.494073 GTTGGAATCCCACGCCAAATAA 59.506 45.455 0.00 0.00 43.41 1.40
108 109 2.096248 GTTGGAATCCCACGCCAAATA 58.904 47.619 0.00 0.00 43.41 1.40
109 110 0.894835 GTTGGAATCCCACGCCAAAT 59.105 50.000 0.00 0.00 43.41 2.32
110 111 1.519751 CGTTGGAATCCCACGCCAAA 61.520 55.000 12.94 0.00 43.41 3.28
111 112 1.969064 CGTTGGAATCCCACGCCAA 60.969 57.895 12.94 0.00 43.41 4.52
112 113 2.359354 CGTTGGAATCCCACGCCA 60.359 61.111 12.94 0.00 43.41 5.69
113 114 3.810896 GCGTTGGAATCCCACGCC 61.811 66.667 32.44 18.51 46.88 5.68
115 116 3.131478 GGGCGTTGGAATCCCACG 61.131 66.667 19.92 19.92 43.41 4.94
116 117 3.131478 CGGGCGTTGGAATCCCAC 61.131 66.667 0.00 0.00 43.41 4.61
117 118 4.418328 CCGGGCGTTGGAATCCCA 62.418 66.667 0.00 0.00 40.05 4.37
120 121 2.540028 TAACCCCGGGCGTTGGAATC 62.540 60.000 27.87 0.00 0.00 2.52
121 122 2.546114 CTAACCCCGGGCGTTGGAAT 62.546 60.000 27.87 11.43 0.00 3.01
122 123 3.247648 TAACCCCGGGCGTTGGAA 61.248 61.111 27.87 12.59 0.00 3.53
123 124 3.708544 CTAACCCCGGGCGTTGGA 61.709 66.667 27.87 14.31 0.00 3.53
128 129 4.726304 TTTGGCTAACCCCGGGCG 62.726 66.667 17.73 11.64 33.59 6.13
129 130 2.567664 ATCTTTGGCTAACCCCGGGC 62.568 60.000 17.73 2.20 33.59 6.13
130 131 0.033503 AATCTTTGGCTAACCCCGGG 60.034 55.000 15.80 15.80 33.59 5.73
131 132 1.476488 CAAATCTTTGGCTAACCCCGG 59.524 52.381 0.00 0.00 34.59 5.73
132 133 2.939460 CAAATCTTTGGCTAACCCCG 57.061 50.000 0.00 0.00 34.59 5.73
142 143 5.775686 TCACAGATTCTTGCCAAATCTTTG 58.224 37.500 10.44 10.44 40.61 2.77
143 144 6.266103 TCTTCACAGATTCTTGCCAAATCTTT 59.734 34.615 3.35 0.00 40.61 2.52
144 145 5.771666 TCTTCACAGATTCTTGCCAAATCTT 59.228 36.000 3.35 0.00 40.61 2.40
145 146 5.319453 TCTTCACAGATTCTTGCCAAATCT 58.681 37.500 0.80 0.80 42.74 2.40
146 147 5.633830 TCTTCACAGATTCTTGCCAAATC 57.366 39.130 0.00 0.00 34.08 2.17
147 148 6.409524 TTTCTTCACAGATTCTTGCCAAAT 57.590 33.333 0.00 0.00 0.00 2.32
148 149 5.737063 GCTTTCTTCACAGATTCTTGCCAAA 60.737 40.000 0.00 0.00 0.00 3.28
149 150 4.261741 GCTTTCTTCACAGATTCTTGCCAA 60.262 41.667 0.00 0.00 0.00 4.52
150 151 3.254166 GCTTTCTTCACAGATTCTTGCCA 59.746 43.478 0.00 0.00 0.00 4.92
151 152 3.254166 TGCTTTCTTCACAGATTCTTGCC 59.746 43.478 0.00 0.00 0.00 4.52
152 153 4.494350 TGCTTTCTTCACAGATTCTTGC 57.506 40.909 0.00 0.00 0.00 4.01
153 154 5.824429 TGTTGCTTTCTTCACAGATTCTTG 58.176 37.500 0.00 0.00 0.00 3.02
154 155 6.455360 TTGTTGCTTTCTTCACAGATTCTT 57.545 33.333 0.00 0.00 0.00 2.52
155 156 6.444633 CATTGTTGCTTTCTTCACAGATTCT 58.555 36.000 0.00 0.00 0.00 2.40
156 157 5.632347 CCATTGTTGCTTTCTTCACAGATTC 59.368 40.000 0.00 0.00 0.00 2.52
157 158 5.302568 TCCATTGTTGCTTTCTTCACAGATT 59.697 36.000 0.00 0.00 0.00 2.40
158 159 4.828939 TCCATTGTTGCTTTCTTCACAGAT 59.171 37.500 0.00 0.00 0.00 2.90
159 160 4.036734 GTCCATTGTTGCTTTCTTCACAGA 59.963 41.667 0.00 0.00 0.00 3.41
160 161 4.037208 AGTCCATTGTTGCTTTCTTCACAG 59.963 41.667 0.00 0.00 0.00 3.66
161 162 3.953612 AGTCCATTGTTGCTTTCTTCACA 59.046 39.130 0.00 0.00 0.00 3.58
162 163 4.036734 TGAGTCCATTGTTGCTTTCTTCAC 59.963 41.667 0.00 0.00 0.00 3.18
163 164 4.206375 TGAGTCCATTGTTGCTTTCTTCA 58.794 39.130 0.00 0.00 0.00 3.02
164 165 4.836125 TGAGTCCATTGTTGCTTTCTTC 57.164 40.909 0.00 0.00 0.00 2.87
165 166 5.796424 AATGAGTCCATTGTTGCTTTCTT 57.204 34.783 0.00 0.00 41.18 2.52
176 177 3.737559 TTGGCTACCAATGAGTCCATT 57.262 42.857 0.00 0.00 43.37 3.16
177 178 3.737559 TTTGGCTACCAATGAGTCCAT 57.262 42.857 0.00 0.00 43.55 3.41
178 179 3.517296 TTTTGGCTACCAATGAGTCCA 57.483 42.857 0.00 0.00 43.55 4.02
179 180 5.405935 AATTTTTGGCTACCAATGAGTCC 57.594 39.130 0.00 0.00 43.55 3.85
180 181 6.710692 CAAATTTTTGGCTACCAATGAGTC 57.289 37.500 0.00 0.00 43.55 3.36
201 202 2.808543 GTGTTGTTTGGTTTGTTGCCAA 59.191 40.909 0.00 0.00 43.51 4.52
202 203 2.224281 TGTGTTGTTTGGTTTGTTGCCA 60.224 40.909 0.00 0.00 0.00 4.92
203 204 2.417719 TGTGTTGTTTGGTTTGTTGCC 58.582 42.857 0.00 0.00 0.00 4.52
204 205 5.220567 CCTTATGTGTTGTTTGGTTTGTTGC 60.221 40.000 0.00 0.00 0.00 4.17
205 206 6.102663 TCCTTATGTGTTGTTTGGTTTGTTG 58.897 36.000 0.00 0.00 0.00 3.33
206 207 6.287589 TCCTTATGTGTTGTTTGGTTTGTT 57.712 33.333 0.00 0.00 0.00 2.83
207 208 5.923733 TCCTTATGTGTTGTTTGGTTTGT 57.076 34.783 0.00 0.00 0.00 2.83
208 209 7.784633 AATTCCTTATGTGTTGTTTGGTTTG 57.215 32.000 0.00 0.00 0.00 2.93
209 210 8.043710 TCAAATTCCTTATGTGTTGTTTGGTTT 58.956 29.630 0.00 0.00 0.00 3.27
210 211 7.494298 GTCAAATTCCTTATGTGTTGTTTGGTT 59.506 33.333 0.00 0.00 0.00 3.67
211 212 6.983890 GTCAAATTCCTTATGTGTTGTTTGGT 59.016 34.615 0.00 0.00 0.00 3.67
212 213 6.143758 CGTCAAATTCCTTATGTGTTGTTTGG 59.856 38.462 0.00 0.00 0.00 3.28
213 214 6.695278 ACGTCAAATTCCTTATGTGTTGTTTG 59.305 34.615 0.00 0.00 0.00 2.93
214 215 6.695278 CACGTCAAATTCCTTATGTGTTGTTT 59.305 34.615 0.00 0.00 0.00 2.83
215 216 6.038825 TCACGTCAAATTCCTTATGTGTTGTT 59.961 34.615 0.00 0.00 0.00 2.83
216 217 5.529430 TCACGTCAAATTCCTTATGTGTTGT 59.471 36.000 0.00 0.00 0.00 3.32
217 218 5.851177 GTCACGTCAAATTCCTTATGTGTTG 59.149 40.000 0.00 0.00 0.00 3.33
218 219 5.048991 GGTCACGTCAAATTCCTTATGTGTT 60.049 40.000 0.00 0.00 0.00 3.32
219 220 4.454504 GGTCACGTCAAATTCCTTATGTGT 59.545 41.667 0.00 0.00 0.00 3.72
220 221 4.454161 TGGTCACGTCAAATTCCTTATGTG 59.546 41.667 0.00 0.00 0.00 3.21
221 222 4.647611 TGGTCACGTCAAATTCCTTATGT 58.352 39.130 0.00 0.00 0.00 2.29
222 223 5.621197 TTGGTCACGTCAAATTCCTTATG 57.379 39.130 0.00 0.00 0.00 1.90
223 224 8.519799 AATATTGGTCACGTCAAATTCCTTAT 57.480 30.769 0.00 0.00 0.00 1.73
224 225 7.931578 AATATTGGTCACGTCAAATTCCTTA 57.068 32.000 0.00 0.00 0.00 2.69
225 226 6.834168 AATATTGGTCACGTCAAATTCCTT 57.166 33.333 0.00 0.00 0.00 3.36
226 227 6.834168 AAATATTGGTCACGTCAAATTCCT 57.166 33.333 0.00 0.00 0.00 3.36
227 228 7.276953 CAAAATATTGGTCACGTCAAATTCC 57.723 36.000 0.00 0.00 32.69 3.01
242 243 7.013655 CCTCCAACTCATCCTACCAAAATATTG 59.986 40.741 0.00 0.00 36.25 1.90
243 244 7.062957 CCTCCAACTCATCCTACCAAAATATT 58.937 38.462 0.00 0.00 0.00 1.28
244 245 6.160459 ACCTCCAACTCATCCTACCAAAATAT 59.840 38.462 0.00 0.00 0.00 1.28
245 246 5.491078 ACCTCCAACTCATCCTACCAAAATA 59.509 40.000 0.00 0.00 0.00 1.40
246 247 4.292306 ACCTCCAACTCATCCTACCAAAAT 59.708 41.667 0.00 0.00 0.00 1.82
247 248 3.655777 ACCTCCAACTCATCCTACCAAAA 59.344 43.478 0.00 0.00 0.00 2.44
248 249 3.256704 ACCTCCAACTCATCCTACCAAA 58.743 45.455 0.00 0.00 0.00 3.28
249 250 2.915869 ACCTCCAACTCATCCTACCAA 58.084 47.619 0.00 0.00 0.00 3.67
250 251 2.642171 ACCTCCAACTCATCCTACCA 57.358 50.000 0.00 0.00 0.00 3.25
251 252 6.464039 GGTTTATACCTCCAACTCATCCTACC 60.464 46.154 0.00 0.00 41.53 3.18
252 253 6.099269 TGGTTTATACCTCCAACTCATCCTAC 59.901 42.308 3.89 0.00 45.27 3.18
253 254 6.206787 TGGTTTATACCTCCAACTCATCCTA 58.793 40.000 3.89 0.00 45.27 2.94
254 255 5.036916 TGGTTTATACCTCCAACTCATCCT 58.963 41.667 3.89 0.00 45.27 3.24
255 256 5.367945 TGGTTTATACCTCCAACTCATCC 57.632 43.478 3.89 0.00 45.27 3.51
256 257 6.657541 TGTTTGGTTTATACCTCCAACTCATC 59.342 38.462 3.89 0.00 45.27 2.92
257 258 6.548321 TGTTTGGTTTATACCTCCAACTCAT 58.452 36.000 3.89 0.00 45.27 2.90
258 259 5.942961 TGTTTGGTTTATACCTCCAACTCA 58.057 37.500 3.89 0.00 45.27 3.41
259 260 6.569801 GCTTGTTTGGTTTATACCTCCAACTC 60.570 42.308 3.89 0.00 45.27 3.01
260 261 5.243060 GCTTGTTTGGTTTATACCTCCAACT 59.757 40.000 3.89 0.00 45.27 3.16
261 262 5.466819 GCTTGTTTGGTTTATACCTCCAAC 58.533 41.667 3.89 5.17 45.27 3.77
262 263 4.525100 GGCTTGTTTGGTTTATACCTCCAA 59.475 41.667 3.89 3.60 45.27 3.53
263 264 4.083565 GGCTTGTTTGGTTTATACCTCCA 58.916 43.478 3.89 0.00 45.27 3.86
264 265 3.446161 GGGCTTGTTTGGTTTATACCTCC 59.554 47.826 3.89 0.00 45.27 4.30
265 266 4.083565 TGGGCTTGTTTGGTTTATACCTC 58.916 43.478 3.89 0.00 45.27 3.85
266 267 4.120946 TGGGCTTGTTTGGTTTATACCT 57.879 40.909 3.89 0.00 45.27 3.08
267 268 4.875561 TTGGGCTTGTTTGGTTTATACC 57.124 40.909 0.00 0.00 45.26 2.73
268 269 5.176039 CGTTTTGGGCTTGTTTGGTTTATAC 59.824 40.000 0.00 0.00 0.00 1.47
269 270 5.068723 TCGTTTTGGGCTTGTTTGGTTTATA 59.931 36.000 0.00 0.00 0.00 0.98
270 271 4.123506 CGTTTTGGGCTTGTTTGGTTTAT 58.876 39.130 0.00 0.00 0.00 1.40
271 272 3.194968 TCGTTTTGGGCTTGTTTGGTTTA 59.805 39.130 0.00 0.00 0.00 2.01
272 273 2.028020 TCGTTTTGGGCTTGTTTGGTTT 60.028 40.909 0.00 0.00 0.00 3.27
273 274 1.550976 TCGTTTTGGGCTTGTTTGGTT 59.449 42.857 0.00 0.00 0.00 3.67
274 275 1.134936 GTCGTTTTGGGCTTGTTTGGT 60.135 47.619 0.00 0.00 0.00 3.67
275 276 1.566404 GTCGTTTTGGGCTTGTTTGG 58.434 50.000 0.00 0.00 0.00 3.28
276 277 1.134965 TGGTCGTTTTGGGCTTGTTTG 60.135 47.619 0.00 0.00 0.00 2.93
277 278 1.187087 TGGTCGTTTTGGGCTTGTTT 58.813 45.000 0.00 0.00 0.00 2.83
278 279 1.408969 ATGGTCGTTTTGGGCTTGTT 58.591 45.000 0.00 0.00 0.00 2.83
279 280 2.279935 TATGGTCGTTTTGGGCTTGT 57.720 45.000 0.00 0.00 0.00 3.16
280 281 3.866883 ATTATGGTCGTTTTGGGCTTG 57.133 42.857 0.00 0.00 0.00 4.01
281 282 4.562552 CCAAATTATGGTCGTTTTGGGCTT 60.563 41.667 5.56 0.00 44.85 4.35
282 283 3.056179 CCAAATTATGGTCGTTTTGGGCT 60.056 43.478 5.56 0.00 44.85 5.19
283 284 3.258228 CCAAATTATGGTCGTTTTGGGC 58.742 45.455 5.56 0.00 44.85 5.36
306 307 7.335673 ACAAAAAGGACCGTTTCATGAATTTTT 59.664 29.630 9.40 13.40 0.00 1.94
307 308 6.821160 ACAAAAAGGACCGTTTCATGAATTTT 59.179 30.769 9.40 8.24 0.00 1.82
308 309 6.345298 ACAAAAAGGACCGTTTCATGAATTT 58.655 32.000 9.40 2.09 0.00 1.82
309 310 5.912892 ACAAAAAGGACCGTTTCATGAATT 58.087 33.333 9.40 0.00 0.00 2.17
310 311 5.529581 ACAAAAAGGACCGTTTCATGAAT 57.470 34.783 9.40 0.00 0.00 2.57
311 312 4.993029 ACAAAAAGGACCGTTTCATGAA 57.007 36.364 3.38 3.38 0.00 2.57
312 313 5.765677 TCATACAAAAAGGACCGTTTCATGA 59.234 36.000 5.83 11.61 0.00 3.07
313 314 5.856455 GTCATACAAAAAGGACCGTTTCATG 59.144 40.000 5.83 9.81 0.00 3.07
314 315 5.334569 CGTCATACAAAAAGGACCGTTTCAT 60.335 40.000 5.83 0.66 0.00 2.57
315 316 4.024725 CGTCATACAAAAAGGACCGTTTCA 60.025 41.667 5.83 0.00 0.00 2.69
316 317 4.024641 ACGTCATACAAAAAGGACCGTTTC 60.025 41.667 5.83 0.00 0.00 2.78
317 318 3.878699 ACGTCATACAAAAAGGACCGTTT 59.121 39.130 0.00 0.00 0.00 3.60
318 319 3.469739 ACGTCATACAAAAAGGACCGTT 58.530 40.909 0.00 0.00 0.00 4.44
319 320 3.062042 GACGTCATACAAAAAGGACCGT 58.938 45.455 11.55 0.00 0.00 4.83
320 321 2.414138 GGACGTCATACAAAAAGGACCG 59.586 50.000 18.91 0.00 0.00 4.79
321 322 2.414138 CGGACGTCATACAAAAAGGACC 59.586 50.000 18.91 0.00 0.00 4.46
322 323 3.062042 ACGGACGTCATACAAAAAGGAC 58.938 45.455 18.91 0.00 0.00 3.85
323 324 3.061322 CACGGACGTCATACAAAAAGGA 58.939 45.455 18.91 0.00 0.00 3.36
324 325 2.158841 CCACGGACGTCATACAAAAAGG 59.841 50.000 18.91 1.86 0.00 3.11
325 326 2.412325 GCCACGGACGTCATACAAAAAG 60.412 50.000 18.91 0.00 0.00 2.27
326 327 1.532007 GCCACGGACGTCATACAAAAA 59.468 47.619 18.91 0.00 0.00 1.94
327 328 1.149987 GCCACGGACGTCATACAAAA 58.850 50.000 18.91 0.00 0.00 2.44
328 329 0.319083 AGCCACGGACGTCATACAAA 59.681 50.000 18.91 0.00 0.00 2.83
329 330 1.133598 CTAGCCACGGACGTCATACAA 59.866 52.381 18.91 0.00 0.00 2.41
330 331 0.736636 CTAGCCACGGACGTCATACA 59.263 55.000 18.91 0.00 0.00 2.29
331 332 0.030369 CCTAGCCACGGACGTCATAC 59.970 60.000 18.91 0.00 0.00 2.39
332 333 1.105167 CCCTAGCCACGGACGTCATA 61.105 60.000 18.91 0.00 0.00 2.15
333 334 2.423898 CCCTAGCCACGGACGTCAT 61.424 63.158 18.91 1.15 0.00 3.06
334 335 3.066190 CCCTAGCCACGGACGTCA 61.066 66.667 18.91 0.00 0.00 4.35
335 336 4.509737 GCCCTAGCCACGGACGTC 62.510 72.222 7.13 7.13 0.00 4.34
337 338 3.792053 GATGCCCTAGCCACGGACG 62.792 68.421 0.00 0.00 38.69 4.79
338 339 2.044806 ATGATGCCCTAGCCACGGAC 62.045 60.000 0.00 0.00 38.69 4.79
339 340 1.766059 ATGATGCCCTAGCCACGGA 60.766 57.895 0.00 0.00 38.69 4.69
340 341 1.598962 CATGATGCCCTAGCCACGG 60.599 63.158 0.00 0.00 38.69 4.94
341 342 2.256591 GCATGATGCCCTAGCCACG 61.257 63.158 6.04 0.00 37.42 4.94
342 343 0.397941 TAGCATGATGCCCTAGCCAC 59.602 55.000 14.72 0.00 46.52 5.01
343 344 0.689055 CTAGCATGATGCCCTAGCCA 59.311 55.000 14.72 0.00 46.52 4.75
344 345 0.676151 GCTAGCATGATGCCCTAGCC 60.676 60.000 21.37 8.90 46.52 3.93
345 346 0.324285 AGCTAGCATGATGCCCTAGC 59.676 55.000 23.35 23.35 46.52 3.42
346 347 2.418471 GCTAGCTAGCATGATGCCCTAG 60.418 54.545 35.42 22.40 46.52 3.02
347 348 1.552337 GCTAGCTAGCATGATGCCCTA 59.448 52.381 35.42 11.14 46.52 3.53
348 349 0.324285 GCTAGCTAGCATGATGCCCT 59.676 55.000 35.42 10.58 46.52 5.19
349 350 2.851798 GCTAGCTAGCATGATGCCC 58.148 57.895 35.42 7.13 46.52 5.36
359 360 1.005630 GGGGCGTCATGCTAGCTAG 60.006 63.158 16.84 16.84 45.43 3.42
360 361 0.178973 TAGGGGCGTCATGCTAGCTA 60.179 55.000 17.23 2.58 45.43 3.32
361 362 1.457643 TAGGGGCGTCATGCTAGCT 60.458 57.895 17.23 0.00 45.43 3.32
362 363 1.005630 CTAGGGGCGTCATGCTAGC 60.006 63.158 8.10 8.10 45.43 3.42
363 364 1.668294 CCTAGGGGCGTCATGCTAG 59.332 63.158 0.00 0.00 45.43 3.42
364 365 3.870955 CCTAGGGGCGTCATGCTA 58.129 61.111 0.00 0.00 45.43 3.49
376 377 0.889306 GTATGACGCCCTAGCCTAGG 59.111 60.000 11.08 11.08 45.81 3.02
377 378 1.912417 AGTATGACGCCCTAGCCTAG 58.088 55.000 0.00 0.00 34.57 3.02
378 379 3.733883 ATAGTATGACGCCCTAGCCTA 57.266 47.619 0.00 0.00 34.57 3.93
379 380 2.606751 ATAGTATGACGCCCTAGCCT 57.393 50.000 0.00 0.00 34.57 4.58
380 381 3.326747 CAAATAGTATGACGCCCTAGCC 58.673 50.000 0.00 0.00 34.57 3.93
381 382 3.326747 CCAAATAGTATGACGCCCTAGC 58.673 50.000 0.00 0.00 0.00 3.42
382 383 3.244078 TGCCAAATAGTATGACGCCCTAG 60.244 47.826 0.00 0.00 0.00 3.02
383 384 2.701423 TGCCAAATAGTATGACGCCCTA 59.299 45.455 0.00 0.00 0.00 3.53
384 385 1.488812 TGCCAAATAGTATGACGCCCT 59.511 47.619 0.00 0.00 0.00 5.19
385 386 1.961793 TGCCAAATAGTATGACGCCC 58.038 50.000 0.00 0.00 0.00 6.13
386 387 2.226437 CCATGCCAAATAGTATGACGCC 59.774 50.000 0.00 0.00 0.00 5.68
387 388 2.878406 ACCATGCCAAATAGTATGACGC 59.122 45.455 0.00 0.00 0.00 5.19
388 389 3.876914 ACACCATGCCAAATAGTATGACG 59.123 43.478 0.00 0.00 0.00 4.35
389 390 4.275936 GGACACCATGCCAAATAGTATGAC 59.724 45.833 0.00 0.00 0.00 3.06
390 391 4.165950 AGGACACCATGCCAAATAGTATGA 59.834 41.667 0.00 0.00 0.00 2.15
391 392 4.464008 AGGACACCATGCCAAATAGTATG 58.536 43.478 0.00 0.00 0.00 2.39
392 393 4.796110 AGGACACCATGCCAAATAGTAT 57.204 40.909 0.00 0.00 0.00 2.12
393 394 5.680619 CTTAGGACACCATGCCAAATAGTA 58.319 41.667 0.00 0.00 0.00 1.82
394 395 4.526970 CTTAGGACACCATGCCAAATAGT 58.473 43.478 0.00 0.00 0.00 2.12
395 396 3.316308 GCTTAGGACACCATGCCAAATAG 59.684 47.826 0.00 0.00 0.00 1.73
396 397 3.287222 GCTTAGGACACCATGCCAAATA 58.713 45.455 0.00 0.00 0.00 1.40
397 398 2.102578 GCTTAGGACACCATGCCAAAT 58.897 47.619 0.00 0.00 0.00 2.32
398 399 1.544724 GCTTAGGACACCATGCCAAA 58.455 50.000 0.00 0.00 0.00 3.28
399 400 0.323360 GGCTTAGGACACCATGCCAA 60.323 55.000 0.00 0.00 36.18 4.52
400 401 1.302949 GGCTTAGGACACCATGCCA 59.697 57.895 0.00 0.00 36.18 4.92
401 402 1.819632 CGGCTTAGGACACCATGCC 60.820 63.158 0.00 0.00 34.11 4.40
402 403 1.819632 CCGGCTTAGGACACCATGC 60.820 63.158 0.00 0.00 0.00 4.06
403 404 1.153168 CCCGGCTTAGGACACCATG 60.153 63.158 0.00 0.00 0.00 3.66
404 405 2.375345 CCCCGGCTTAGGACACCAT 61.375 63.158 0.00 0.00 0.00 3.55
405 406 3.006728 CCCCGGCTTAGGACACCA 61.007 66.667 0.00 0.00 0.00 4.17
406 407 4.484872 GCCCCGGCTTAGGACACC 62.485 72.222 0.00 0.00 38.26 4.16
407 408 4.832608 CGCCCCGGCTTAGGACAC 62.833 72.222 3.84 0.00 39.32 3.67
417 418 2.879233 ATGTAGTATGGCGCCCCGG 61.879 63.158 26.77 0.00 0.00 5.73
418 419 1.667830 CATGTAGTATGGCGCCCCG 60.668 63.158 26.77 0.00 0.00 5.73
419 420 0.602905 GACATGTAGTATGGCGCCCC 60.603 60.000 26.77 12.19 0.00 5.80
420 421 0.944311 CGACATGTAGTATGGCGCCC 60.944 60.000 26.77 8.84 43.99 6.13
421 422 2.517598 CGACATGTAGTATGGCGCC 58.482 57.895 22.73 22.73 43.99 6.53
424 425 4.049546 TGGTAACGACATGTAGTATGGC 57.950 45.455 12.25 3.37 42.51 4.40
425 426 5.690409 GTCATGGTAACGACATGTAGTATGG 59.310 44.000 12.25 0.40 44.57 2.74
426 427 5.398416 CGTCATGGTAACGACATGTAGTATG 59.602 44.000 12.25 11.69 44.57 2.39
427 428 5.066893 ACGTCATGGTAACGACATGTAGTAT 59.933 40.000 12.25 5.68 44.57 2.12
428 429 4.395854 ACGTCATGGTAACGACATGTAGTA 59.604 41.667 12.25 0.00 44.57 1.82
429 430 3.192001 ACGTCATGGTAACGACATGTAGT 59.808 43.478 11.87 5.70 44.57 2.73
430 431 3.766151 ACGTCATGGTAACGACATGTAG 58.234 45.455 11.87 0.00 44.57 2.74
431 432 3.427909 GGACGTCATGGTAACGACATGTA 60.428 47.826 18.91 0.00 44.57 2.29
432 433 2.602878 GACGTCATGGTAACGACATGT 58.397 47.619 11.55 0.00 44.57 3.21
433 434 1.924524 GGACGTCATGGTAACGACATG 59.075 52.381 18.91 0.00 45.39 3.21
434 435 1.822990 AGGACGTCATGGTAACGACAT 59.177 47.619 18.91 1.34 42.62 3.06
435 436 1.250328 AGGACGTCATGGTAACGACA 58.750 50.000 18.91 0.00 42.62 4.35
436 437 2.793933 GCTAGGACGTCATGGTAACGAC 60.794 54.545 18.91 5.98 42.62 4.34
437 438 1.402968 GCTAGGACGTCATGGTAACGA 59.597 52.381 18.91 0.00 42.62 3.85
438 439 1.535437 GGCTAGGACGTCATGGTAACG 60.535 57.143 18.91 4.06 45.37 3.18
439 440 1.202498 GGGCTAGGACGTCATGGTAAC 60.202 57.143 18.91 7.15 0.00 2.50
440 441 1.117150 GGGCTAGGACGTCATGGTAA 58.883 55.000 18.91 0.00 0.00 2.85
441 442 1.105167 CGGGCTAGGACGTCATGGTA 61.105 60.000 18.91 2.12 0.00 3.25
442 443 2.423898 CGGGCTAGGACGTCATGGT 61.424 63.158 18.91 0.90 0.00 3.55
443 444 2.417516 CGGGCTAGGACGTCATGG 59.582 66.667 18.91 14.10 0.00 3.66
444 445 2.417516 CCGGGCTAGGACGTCATG 59.582 66.667 18.91 7.57 0.00 3.07
445 446 2.838225 CCCGGGCTAGGACGTCAT 60.838 66.667 18.91 13.80 0.00 3.06
458 459 4.899239 GAGAGCATGACGCCCCGG 62.899 72.222 0.00 0.00 44.04 5.73
459 460 2.413437 CTAGAGAGCATGACGCCCCG 62.413 65.000 0.00 0.00 44.04 5.73
460 461 1.365633 CTAGAGAGCATGACGCCCC 59.634 63.158 0.00 0.00 44.04 5.80
470 471 0.873743 GTGGCGACATGCTAGAGAGC 60.874 60.000 0.00 0.00 46.14 4.09
471 472 0.457443 TGTGGCGACATGCTAGAGAG 59.543 55.000 0.00 0.00 46.14 3.20
472 473 0.457443 CTGTGGCGACATGCTAGAGA 59.543 55.000 0.69 0.00 46.79 3.10
473 474 1.150567 GCTGTGGCGACATGCTAGAG 61.151 60.000 11.29 0.00 46.60 2.43
474 475 1.153568 GCTGTGGCGACATGCTAGA 60.154 57.895 11.29 0.00 46.14 2.43
475 476 3.403277 GCTGTGGCGACATGCTAG 58.597 61.111 11.29 1.76 46.14 3.42
486 487 3.971453 ATGACGTCTCGCGCTGTGG 62.971 63.158 17.92 0.00 46.11 4.17
487 488 2.504899 ATGACGTCTCGCGCTGTG 60.505 61.111 17.92 0.05 46.11 3.66
488 489 2.504899 CATGACGTCTCGCGCTGT 60.505 61.111 17.92 0.00 46.11 4.40
489 490 3.906649 GCATGACGTCTCGCGCTG 61.907 66.667 17.92 0.00 46.11 5.18
490 491 3.914605 TTGCATGACGTCTCGCGCT 62.915 57.895 17.92 0.00 46.11 5.92
491 492 2.493088 TTTTGCATGACGTCTCGCGC 62.493 55.000 17.92 13.64 46.11 6.86
493 494 0.790207 TCTTTTGCATGACGTCTCGC 59.210 50.000 17.92 18.54 0.00 5.03
494 495 2.731451 TCTTCTTTTGCATGACGTCTCG 59.269 45.455 17.92 8.74 0.00 4.04
495 496 3.120511 GGTCTTCTTTTGCATGACGTCTC 60.121 47.826 17.92 6.60 0.00 3.36
496 497 2.808543 GGTCTTCTTTTGCATGACGTCT 59.191 45.455 17.92 0.00 0.00 4.18
497 498 2.548057 TGGTCTTCTTTTGCATGACGTC 59.452 45.455 9.11 9.11 0.00 4.34
498 499 2.571212 TGGTCTTCTTTTGCATGACGT 58.429 42.857 0.00 0.00 0.00 4.34
499 500 3.837213 ATGGTCTTCTTTTGCATGACG 57.163 42.857 0.00 0.00 0.00 4.35
500 501 5.531634 TGAAATGGTCTTCTTTTGCATGAC 58.468 37.500 0.00 0.00 0.00 3.06
501 502 5.787953 TGAAATGGTCTTCTTTTGCATGA 57.212 34.783 0.00 0.00 0.00 3.07
502 503 6.160684 TCATGAAATGGTCTTCTTTTGCATG 58.839 36.000 0.00 0.00 46.73 4.06
503 504 6.349243 TCATGAAATGGTCTTCTTTTGCAT 57.651 33.333 0.00 0.00 46.73 3.96
504 505 5.787953 TCATGAAATGGTCTTCTTTTGCA 57.212 34.783 0.00 0.00 46.73 4.08
505 506 7.662604 ATTTCATGAAATGGTCTTCTTTTGC 57.337 32.000 28.57 0.00 46.73 3.68
538 539 8.914011 GCCTTTACCTGACAAAATAATCCTAAT 58.086 33.333 0.00 0.00 0.00 1.73
539 540 7.340999 GGCCTTTACCTGACAAAATAATCCTAA 59.659 37.037 0.00 0.00 0.00 2.69
540 541 6.831868 GGCCTTTACCTGACAAAATAATCCTA 59.168 38.462 0.00 0.00 0.00 2.94
541 542 5.656859 GGCCTTTACCTGACAAAATAATCCT 59.343 40.000 0.00 0.00 0.00 3.24
542 543 5.420739 TGGCCTTTACCTGACAAAATAATCC 59.579 40.000 3.32 0.00 0.00 3.01
543 544 6.377146 TCTGGCCTTTACCTGACAAAATAATC 59.623 38.462 3.32 0.00 33.20 1.75
544 545 6.252995 TCTGGCCTTTACCTGACAAAATAAT 58.747 36.000 3.32 0.00 33.20 1.28
545 546 5.636123 TCTGGCCTTTACCTGACAAAATAA 58.364 37.500 3.32 0.00 33.20 1.40
546 547 5.249780 TCTGGCCTTTACCTGACAAAATA 57.750 39.130 3.32 0.00 33.20 1.40
547 548 4.112634 TCTGGCCTTTACCTGACAAAAT 57.887 40.909 3.32 0.00 33.20 1.82
548 549 3.586470 TCTGGCCTTTACCTGACAAAA 57.414 42.857 3.32 0.00 33.20 2.44
549 550 3.806949 ATCTGGCCTTTACCTGACAAA 57.193 42.857 3.32 0.00 40.07 2.83
550 551 3.806949 AATCTGGCCTTTACCTGACAA 57.193 42.857 3.32 0.00 40.07 3.18
551 552 3.181434 ACAAATCTGGCCTTTACCTGACA 60.181 43.478 3.32 0.00 40.07 3.58
552 553 3.421844 ACAAATCTGGCCTTTACCTGAC 58.578 45.455 3.32 0.00 40.07 3.51
553 554 3.806949 ACAAATCTGGCCTTTACCTGA 57.193 42.857 3.32 0.00 41.30 3.86
554 555 4.871933 AAACAAATCTGGCCTTTACCTG 57.128 40.909 3.32 0.00 0.00 4.00
555 556 7.553504 AAATAAACAAATCTGGCCTTTACCT 57.446 32.000 3.32 0.00 0.00 3.08
556 557 7.875554 TCAAAATAAACAAATCTGGCCTTTACC 59.124 33.333 3.32 0.00 0.00 2.85
557 558 8.708742 GTCAAAATAAACAAATCTGGCCTTTAC 58.291 33.333 3.32 0.00 0.00 2.01
558 559 7.596995 CGTCAAAATAAACAAATCTGGCCTTTA 59.403 33.333 3.32 0.00 0.00 1.85
559 560 6.423604 CGTCAAAATAAACAAATCTGGCCTTT 59.576 34.615 3.32 0.00 0.00 3.11
560 561 5.925969 CGTCAAAATAAACAAATCTGGCCTT 59.074 36.000 3.32 0.00 0.00 4.35
561 562 5.469479 CGTCAAAATAAACAAATCTGGCCT 58.531 37.500 3.32 0.00 0.00 5.19
562 563 4.091365 GCGTCAAAATAAACAAATCTGGCC 59.909 41.667 0.00 0.00 0.00 5.36
563 564 4.201485 CGCGTCAAAATAAACAAATCTGGC 60.201 41.667 0.00 0.00 0.00 4.85
564 565 4.915085 ACGCGTCAAAATAAACAAATCTGG 59.085 37.500 5.58 0.00 0.00 3.86
565 566 5.851177 AGACGCGTCAAAATAAACAAATCTG 59.149 36.000 37.85 0.00 0.00 2.90
566 567 5.851177 CAGACGCGTCAAAATAAACAAATCT 59.149 36.000 37.85 11.21 0.00 2.40
567 568 5.441485 GCAGACGCGTCAAAATAAACAAATC 60.441 40.000 37.85 8.66 0.00 2.17
568 569 4.381566 GCAGACGCGTCAAAATAAACAAAT 59.618 37.500 37.85 12.34 0.00 2.32
569 570 3.726730 GCAGACGCGTCAAAATAAACAAA 59.273 39.130 37.85 0.00 0.00 2.83
570 571 3.002862 AGCAGACGCGTCAAAATAAACAA 59.997 39.130 37.85 0.00 45.49 2.83
571 572 2.546368 AGCAGACGCGTCAAAATAAACA 59.454 40.909 37.85 0.00 45.49 2.83
572 573 2.902484 CAGCAGACGCGTCAAAATAAAC 59.098 45.455 37.85 18.18 45.49 2.01
573 574 2.095969 CCAGCAGACGCGTCAAAATAAA 60.096 45.455 37.85 0.00 45.49 1.40
574 575 1.463056 CCAGCAGACGCGTCAAAATAA 59.537 47.619 37.85 0.00 45.49 1.40
575 576 1.075542 CCAGCAGACGCGTCAAAATA 58.924 50.000 37.85 0.00 45.49 1.40
576 577 1.577328 CCCAGCAGACGCGTCAAAAT 61.577 55.000 37.85 19.53 45.49 1.82
577 578 2.250939 CCCAGCAGACGCGTCAAAA 61.251 57.895 37.85 0.00 45.49 2.44
578 579 2.664851 CCCAGCAGACGCGTCAAA 60.665 61.111 37.85 0.00 45.49 2.69
583 584 4.749310 AAGAGCCCAGCAGACGCG 62.749 66.667 3.53 3.53 45.49 6.01
584 585 2.817396 GAAGAGCCCAGCAGACGC 60.817 66.667 0.00 0.00 38.99 5.19
585 586 1.739562 GTGAAGAGCCCAGCAGACG 60.740 63.158 0.00 0.00 0.00 4.18
586 587 1.739562 CGTGAAGAGCCCAGCAGAC 60.740 63.158 0.00 0.00 0.00 3.51
661 717 5.391097 GGGTGCAAAGGTAACAAAACAAAAC 60.391 40.000 0.00 0.00 41.41 2.43
669 725 2.243810 GGATGGGTGCAAAGGTAACAA 58.756 47.619 0.00 0.00 41.41 2.83
670 726 1.549037 GGGATGGGTGCAAAGGTAACA 60.549 52.381 0.00 0.00 41.41 2.41
671 727 1.182667 GGGATGGGTGCAAAGGTAAC 58.817 55.000 0.00 0.00 0.00 2.50
672 728 0.040499 GGGGATGGGTGCAAAGGTAA 59.960 55.000 0.00 0.00 0.00 2.85
673 729 1.143329 TGGGGATGGGTGCAAAGGTA 61.143 55.000 0.00 0.00 0.00 3.08
674 730 1.814292 ATGGGGATGGGTGCAAAGGT 61.814 55.000 0.00 0.00 0.00 3.50
675 731 1.002017 ATGGGGATGGGTGCAAAGG 59.998 57.895 0.00 0.00 0.00 3.11
676 732 1.386525 CGATGGGGATGGGTGCAAAG 61.387 60.000 0.00 0.00 0.00 2.77
738 794 4.731612 ACAGTGCGAGGCAGCGAG 62.732 66.667 3.93 0.00 40.08 5.03
739 795 4.724602 GACAGTGCGAGGCAGCGA 62.725 66.667 3.93 0.00 40.08 4.93
741 797 3.418068 GTGACAGTGCGAGGCAGC 61.418 66.667 0.00 0.00 40.08 5.25
742 798 2.740055 GGTGACAGTGCGAGGCAG 60.740 66.667 0.00 0.00 40.08 4.85
743 799 3.233980 AGGTGACAGTGCGAGGCA 61.234 61.111 0.00 0.00 35.60 4.75
744 800 2.740055 CAGGTGACAGTGCGAGGC 60.740 66.667 0.00 0.00 0.00 4.70
882 945 4.680537 ACTGGAGAGACCGCGGGT 62.681 66.667 31.76 17.10 42.61 5.28
1116 1187 3.752222 CAGAAAGAACAGCATCAGAGCTT 59.248 43.478 0.00 0.00 43.70 3.74
1125 1196 4.022416 ACACACAAAACAGAAAGAACAGCA 60.022 37.500 0.00 0.00 0.00 4.41
1130 1201 6.016693 TCAGAACACACACAAAACAGAAAGAA 60.017 34.615 0.00 0.00 0.00 2.52
1132 1203 5.698832 TCAGAACACACACAAAACAGAAAG 58.301 37.500 0.00 0.00 0.00 2.62
1142 1213 2.276201 CTTCCGTTCAGAACACACACA 58.724 47.619 13.82 0.00 0.00 3.72
1415 1488 1.674221 CCCTTGTCGAGCTTCCTCTTG 60.674 57.143 0.00 0.00 35.90 3.02
1502 1575 2.173382 CGCACCTTTTTCCTCGCG 59.827 61.111 0.00 0.00 36.47 5.87
1530 1609 3.024547 AGATGCGAGCTTGGTAGAAGTA 58.975 45.455 2.37 0.00 0.00 2.24
1531 1610 1.827969 AGATGCGAGCTTGGTAGAAGT 59.172 47.619 2.37 0.00 0.00 3.01
1532 1611 2.200067 CAGATGCGAGCTTGGTAGAAG 58.800 52.381 2.37 0.00 0.00 2.85
1533 1612 1.740380 GCAGATGCGAGCTTGGTAGAA 60.740 52.381 2.37 0.00 0.00 2.10
1534 1613 0.179100 GCAGATGCGAGCTTGGTAGA 60.179 55.000 2.37 0.00 0.00 2.59
1535 1614 0.460811 TGCAGATGCGAGCTTGGTAG 60.461 55.000 2.37 0.00 45.83 3.18
1536 1615 0.178767 ATGCAGATGCGAGCTTGGTA 59.821 50.000 2.37 0.00 45.83 3.25
1563 1642 3.389221 ACAAACGCATTCCAATCCAAAC 58.611 40.909 0.00 0.00 0.00 2.93
1589 1668 3.427503 CGGAAAACCAGGCACACAATATC 60.428 47.826 0.00 0.00 0.00 1.63
1590 1669 2.491693 CGGAAAACCAGGCACACAATAT 59.508 45.455 0.00 0.00 0.00 1.28
1591 1670 1.883275 CGGAAAACCAGGCACACAATA 59.117 47.619 0.00 0.00 0.00 1.90
1593 1672 1.388065 CCGGAAAACCAGGCACACAA 61.388 55.000 0.00 0.00 0.00 3.33
1682 1766 0.322366 TTGCGCTGGATCCACATTCA 60.322 50.000 11.44 3.75 0.00 2.57
1724 1808 2.821546 TGATGAAGGTTAATCCGCTCG 58.178 47.619 0.00 0.00 41.99 5.03
1744 1828 9.965902 AACTATCTGGTTGTTAGAGATTTGATT 57.034 29.630 0.00 0.00 0.00 2.57
1783 1867 1.476845 TAGCCGCCTTTGTGTGAGGA 61.477 55.000 0.00 0.00 36.33 3.71
1784 1868 1.003839 TAGCCGCCTTTGTGTGAGG 60.004 57.895 0.00 0.00 37.35 3.86
1785 1869 1.021390 CCTAGCCGCCTTTGTGTGAG 61.021 60.000 0.00 0.00 0.00 3.51
1786 1870 1.003839 CCTAGCCGCCTTTGTGTGA 60.004 57.895 0.00 0.00 0.00 3.58
1883 1967 7.853929 CGAGAAAGCTACTAGAAGATTACTGAC 59.146 40.741 0.00 0.00 0.00 3.51
1959 2046 0.250234 TAGCCACCAGTGCTGCTAAG 59.750 55.000 0.00 0.00 39.91 2.18
1960 2047 0.911769 ATAGCCACCAGTGCTGCTAA 59.088 50.000 11.21 0.00 39.53 3.09
1961 2048 0.178767 CATAGCCACCAGTGCTGCTA 59.821 55.000 10.03 10.03 39.91 3.49
1962 2049 1.077930 CATAGCCACCAGTGCTGCT 60.078 57.895 0.00 6.74 39.91 4.24
1963 2050 2.768492 GCATAGCCACCAGTGCTGC 61.768 63.158 0.00 0.00 39.91 5.25
1964 2051 3.506108 GCATAGCCACCAGTGCTG 58.494 61.111 0.00 0.00 39.91 4.41
2091 2178 3.673484 CCACGCCCCAAGCTTGTG 61.673 66.667 24.35 13.93 39.05 3.33
2166 2253 4.247258 TCATGGCATTTGAAGATTGCAAC 58.753 39.130 0.00 0.00 36.57 4.17
2223 2310 3.923461 GCCAACGCTGCACAAATAAAATA 59.077 39.130 0.00 0.00 0.00 1.40
2224 2311 2.736192 GCCAACGCTGCACAAATAAAAT 59.264 40.909 0.00 0.00 0.00 1.82
2252 2339 6.843752 TCTTAAGGGAACAATTACAAGGACA 58.156 36.000 1.85 0.00 0.00 4.02
2267 2354 8.553085 TGTCAGATCTGATTTATCTTAAGGGA 57.447 34.615 27.51 0.00 42.18 4.20
2321 2614 5.306532 CAAGTCATCAATACAAGCTTGCT 57.693 39.130 26.27 15.35 0.00 3.91
2322 2615 3.855950 GCAAGTCATCAATACAAGCTTGC 59.144 43.478 26.27 9.97 46.31 4.01
2340 2633 5.705441 TCCACACCTATTCTTTACTTGCAAG 59.295 40.000 24.84 24.84 0.00 4.01
2421 2714 3.415457 AAGGGAGCAAGAACAGAAGAG 57.585 47.619 0.00 0.00 0.00 2.85
2461 2754 3.834231 ACAAGTATGAAGCTTTGGCCATT 59.166 39.130 6.09 0.00 39.73 3.16
2483 2776 2.928801 ACCTACCAATGCGCATGATA 57.071 45.000 26.09 15.14 0.00 2.15
2491 2784 1.746470 GTGGGTGTACCTACCAATGC 58.254 55.000 6.30 0.00 41.12 3.56
2521 2814 2.867368 ACACTATGACGTTTTGCGACAA 59.133 40.909 0.00 0.00 46.61 3.18
2714 3008 4.916041 AGGAAAAGATGACAGATCACCA 57.084 40.909 0.00 0.00 37.79 4.17
2748 3042 2.095919 AGTTAGCGTTCGCATTTTCACC 60.096 45.455 18.95 0.00 0.00 4.02
2783 3077 8.945481 TTTGTATGGCATCTTGAAATAATTGG 57.055 30.769 1.65 0.00 0.00 3.16
2806 3100 5.300539 GGAGACTTTTTCAGCTTCCTCTTTT 59.699 40.000 0.00 0.00 0.00 2.27
2819 3113 6.486993 TCCTTTTCTTGCTAGGAGACTTTTTC 59.513 38.462 0.00 0.00 43.67 2.29
2938 3232 9.020813 GTTTCTTAAGAATGGTTTGAACTTCAC 57.979 33.333 18.37 5.15 33.54 3.18
3181 3475 4.323028 CCAACTCTGGCTCTTCTGTATTGA 60.323 45.833 0.00 0.00 35.39 2.57
3214 3508 4.421131 AGTCCCCGATAAAGCATCTATCT 58.579 43.478 0.00 0.00 0.00 1.98
3325 3619 7.315142 CCTCTTAGAGATCTCTATGCAATGAC 58.685 42.308 28.77 0.00 41.37 3.06
3431 3725 0.387565 GGCCTTCTTGCAAACGGAAA 59.612 50.000 0.00 0.00 0.00 3.13
3566 3862 5.380043 CCAGAACTATAAGGATGTGGCAAT 58.620 41.667 0.00 0.00 0.00 3.56
3581 3877 2.768527 AGAAGCAGCATAGCCAGAACTA 59.231 45.455 0.00 0.00 34.23 2.24
3663 3959 1.581934 TGAACTTCTGTCAAGTGGCG 58.418 50.000 0.00 0.00 0.00 5.69
3740 4036 6.104439 TGTGCATTTGTTGATTTGTTTGAC 57.896 33.333 0.00 0.00 0.00 3.18
3980 4276 2.027385 GGGGCTTCATGGTTGATTCTC 58.973 52.381 0.00 0.00 0.00 2.87
4082 4378 0.035630 AGCTGGGATGCTGTCTGAAC 60.036 55.000 0.00 0.00 42.33 3.18
4093 4389 1.558756 CCACTCTTTCAGAGCTGGGAT 59.441 52.381 0.00 0.00 46.12 3.85
4117 4413 3.243636 GCTGGGAATTGCATGGTTATGAG 60.244 47.826 0.00 0.00 36.36 2.90
4247 4543 7.402054 TCTGCTTATAATTCTGTCTTGGGAAA 58.598 34.615 0.00 0.00 0.00 3.13
4370 4666 5.240891 TCTTCAGCTCTGATTTGGTTACTG 58.759 41.667 0.00 0.00 39.64 2.74
4405 4701 3.137544 AGAAACTTGTGTGTACATCCCCA 59.862 43.478 0.00 0.00 36.53 4.96
4414 4710 1.745232 TTGCGGAGAAACTTGTGTGT 58.255 45.000 0.00 0.00 0.00 3.72
4582 4883 1.165270 GTTTGGCACGGCTAGTTGAT 58.835 50.000 0.00 0.00 0.00 2.57
4657 4958 1.342174 CTTGATTTGCCACAGCTGGTT 59.658 47.619 19.93 0.00 40.17 3.67
4905 5206 6.966435 AAACTTTGTTTGAGTTGTTGATGG 57.034 33.333 0.00 0.00 37.41 3.51
4940 5241 2.995480 CATTGAAGGGGGCAATGGT 58.005 52.632 0.00 0.00 45.42 3.55
4965 5266 3.916776 GCTTCACTGCTAAAAACATGAGC 59.083 43.478 0.00 0.00 36.72 4.26
5013 5314 3.793888 GGGAACTAGTGGCCGGGG 61.794 72.222 2.18 0.00 0.00 5.73
5246 5551 8.404180 GATCCATAGATTTCTACCAGGAGTGGA 61.404 44.444 0.00 6.39 38.43 4.02
5693 6002 4.243270 CGACGAAAAGACTCATTAACCCT 58.757 43.478 0.00 0.00 0.00 4.34
5741 6060 1.002315 GGTTGGGCTTGGTACGAAGTA 59.998 52.381 17.55 3.93 45.11 2.24
5842 6161 6.582295 GGAGCATATTACAACAACAACAACAG 59.418 38.462 0.00 0.00 0.00 3.16
5843 6162 6.264292 AGGAGCATATTACAACAACAACAACA 59.736 34.615 0.00 0.00 0.00 3.33
5844 6163 6.582295 CAGGAGCATATTACAACAACAACAAC 59.418 38.462 0.00 0.00 0.00 3.32
5845 6164 6.294453 CCAGGAGCATATTACAACAACAACAA 60.294 38.462 0.00 0.00 0.00 2.83
5846 6165 5.182950 CCAGGAGCATATTACAACAACAACA 59.817 40.000 0.00 0.00 0.00 3.33
5847 6166 5.640732 CCAGGAGCATATTACAACAACAAC 58.359 41.667 0.00 0.00 0.00 3.32
5904 6223 0.107312 AGAGATGCTGCCGATTGCTT 60.107 50.000 0.00 0.00 42.00 3.91
6011 6331 7.173907 ACAAACAACAATGGTTTCAACATGAAA 59.826 29.630 0.00 1.57 43.37 2.69
6031 6351 3.473093 TCGCTCGAAAACAAACAAACA 57.527 38.095 0.00 0.00 0.00 2.83
6035 6355 3.953874 TTGATCGCTCGAAAACAAACA 57.046 38.095 0.00 0.00 0.00 2.83
6054 6374 2.496817 GCAGGGCTCTCGACGATT 59.503 61.111 0.00 0.00 0.00 3.34
6057 6377 2.788191 AAAAGGCAGGGCTCTCGACG 62.788 60.000 0.00 0.00 0.00 5.12
6059 6379 1.296715 GAAAAGGCAGGGCTCTCGA 59.703 57.895 0.00 0.00 0.00 4.04
6086 6406 2.417933 GCAGCACTGAAACTACCATCTG 59.582 50.000 0.81 0.00 0.00 2.90
6115 6435 5.831103 TCCCTTCCAATGCTAGAAAATTCT 58.169 37.500 0.00 0.77 41.24 2.40
6163 6483 2.418628 CGTATTACCACCACTGCCAAAG 59.581 50.000 0.00 0.00 0.00 2.77
6237 6571 7.465353 TCACAGAATTCATTAATTTGCTGGA 57.535 32.000 8.44 0.00 35.41 3.86
6246 6580 6.016024 AGCTTGCAGTTCACAGAATTCATTAA 60.016 34.615 8.44 0.00 0.00 1.40
6316 6652 4.096833 CCATGTACTACAATTGTGCAGCAT 59.903 41.667 21.42 15.64 33.91 3.79
6328 6664 2.785562 GGCAACCAACCATGTACTACA 58.214 47.619 0.00 0.00 0.00 2.74
6387 6723 2.132740 TTGCGTCTGAATTTTGCACC 57.867 45.000 0.00 0.00 34.90 5.01
6388 6724 2.097925 CGTTTGCGTCTGAATTTTGCAC 60.098 45.455 0.00 0.00 34.90 4.57
6389 6725 2.115595 CGTTTGCGTCTGAATTTTGCA 58.884 42.857 0.00 0.00 0.00 4.08
6426 6762 4.713824 TTCTGATTCTACGGTGTACCAG 57.286 45.455 1.50 0.00 35.14 4.00
6458 6794 2.395651 CCGTTGGTGTCGGTGAAAA 58.604 52.632 0.00 0.00 42.62 2.29
6526 6865 3.692406 GTCGACCTCCGCACCCTT 61.692 66.667 3.51 0.00 38.37 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.