Multiple sequence alignment - TraesCS1A01G338200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G338200 chr1A 100.000 7398 0 0 1 7398 527949450 527956847 0.000000e+00 13662.0
1 TraesCS1A01G338200 chr1A 87.861 173 20 1 6836 7007 581544065 581543893 1.260000e-47 202.0
2 TraesCS1A01G338200 chr1B 95.997 3847 116 19 19 3837 581199352 581203188 0.000000e+00 6216.0
3 TraesCS1A01G338200 chr1B 90.380 2027 112 29 4640 6636 581204098 581206071 0.000000e+00 2586.0
4 TraesCS1A01G338200 chr1B 94.320 581 20 4 3891 4469 581203300 581203869 0.000000e+00 878.0
5 TraesCS1A01G338200 chr1B 96.460 113 4 0 4471 4583 581203986 581204098 3.520000e-43 187.0
6 TraesCS1A01G338200 chr1B 100.000 37 0 0 3849 3885 581203233 581203269 1.330000e-07 69.4
7 TraesCS1A01G338200 chr1D 95.992 3842 117 16 30 3837 430409391 430413229 0.000000e+00 6207.0
8 TraesCS1A01G338200 chr1D 95.196 2956 115 14 3885 6825 430413335 430416278 0.000000e+00 4647.0
9 TraesCS1A01G338200 chr1D 88.068 176 16 4 6836 7006 493673649 493673824 3.500000e-48 204.0
10 TraesCS1A01G338200 chr3B 81.744 1468 266 2 1848 3314 524453361 524451895 0.000000e+00 1225.0
11 TraesCS1A01G338200 chr3B 87.363 182 16 4 6827 7002 11069681 11069861 1.260000e-47 202.0
12 TraesCS1A01G338200 chr3A 81.688 1469 265 4 1848 3314 517665870 517664404 0.000000e+00 1219.0
13 TraesCS1A01G338200 chr3A 88.372 172 18 1 6836 7005 732662779 732662608 9.730000e-49 206.0
14 TraesCS1A01G338200 chr3A 89.623 106 10 1 7273 7377 136663927 136664032 4.660000e-27 134.0
15 TraesCS1A01G338200 chr3D 81.497 1470 266 6 1848 3314 398406168 398404702 0.000000e+00 1203.0
16 TraesCS1A01G338200 chr3D 90.698 43 4 0 7235 7277 435451254 435451296 2.880000e-04 58.4
17 TraesCS1A01G338200 chr2A 92.308 182 12 2 6827 7006 32548089 32548270 2.650000e-64 257.0
18 TraesCS1A01G338200 chr2A 87.912 182 17 3 6836 7013 88796210 88796030 7.520000e-50 209.0
19 TraesCS1A01G338200 chr2A 87.931 174 18 3 6836 7008 747175295 747175124 1.260000e-47 202.0
20 TraesCS1A01G338200 chr4A 88.202 178 15 4 6836 7008 11366196 11366020 2.710000e-49 207.0
21 TraesCS1A01G338200 chr4A 100.000 28 0 0 6321 6348 467264697 467264670 1.300000e-02 52.8
22 TraesCS1A01G338200 chr6A 88.068 176 15 4 6836 7006 180309331 180309157 3.500000e-48 204.0
23 TraesCS1A01G338200 chr6A 92.683 41 3 0 7237 7277 454654000 454654040 8.020000e-05 60.2
24 TraesCS1A01G338200 chr7A 94.505 91 4 1 7272 7361 608509124 608509214 1.000000e-28 139.0
25 TraesCS1A01G338200 chr6B 95.455 88 3 1 7274 7360 477833988 477834075 1.000000e-28 139.0
26 TraesCS1A01G338200 chr5B 94.444 90 4 1 7274 7362 26770502 26770413 3.600000e-28 137.0
27 TraesCS1A01G338200 chr5B 91.111 45 1 3 7236 7277 327751382 327751426 2.880000e-04 58.4
28 TraesCS1A01G338200 chr7B 92.391 92 5 2 7272 7361 622831033 622831124 6.020000e-26 130.0
29 TraesCS1A01G338200 chr7B 92.857 42 2 1 7236 7277 181678756 181678716 8.020000e-05 60.2
30 TraesCS1A01G338200 chr4D 91.579 95 7 1 7277 7370 35618690 35618784 6.020000e-26 130.0
31 TraesCS1A01G338200 chr4D 86.325 117 12 4 7256 7368 99160545 99160661 2.800000e-24 124.0
32 TraesCS1A01G338200 chr4D 100.000 28 0 0 6321 6348 109242438 109242465 1.300000e-02 52.8
33 TraesCS1A01G338200 chr7D 92.391 92 4 3 7282 7370 458728548 458728457 2.170000e-25 128.0
34 TraesCS1A01G338200 chr5D 86.087 115 8 3 7248 7361 449506542 449506435 4.690000e-22 117.0
35 TraesCS1A01G338200 chr5D 94.872 39 2 0 7239 7277 441882236 441882198 2.230000e-05 62.1
36 TraesCS1A01G338200 chr5D 91.111 45 1 3 7236 7277 288358750 288358794 2.880000e-04 58.4
37 TraesCS1A01G338200 chr2D 91.667 48 2 2 7231 7277 1632269 1632315 1.720000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G338200 chr1A 527949450 527956847 7397 False 13662.00 13662 100.0000 1 7398 1 chr1A.!!$F1 7397
1 TraesCS1A01G338200 chr1B 581199352 581206071 6719 False 1987.28 6216 95.4314 19 6636 5 chr1B.!!$F1 6617
2 TraesCS1A01G338200 chr1D 430409391 430416278 6887 False 5427.00 6207 95.5940 30 6825 2 chr1D.!!$F2 6795
3 TraesCS1A01G338200 chr3B 524451895 524453361 1466 True 1225.00 1225 81.7440 1848 3314 1 chr3B.!!$R1 1466
4 TraesCS1A01G338200 chr3A 517664404 517665870 1466 True 1219.00 1219 81.6880 1848 3314 1 chr3A.!!$R1 1466
5 TraesCS1A01G338200 chr3D 398404702 398406168 1466 True 1203.00 1203 81.4970 1848 3314 1 chr3D.!!$R1 1466

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
646 660 1.144969 TCAAATTCGTGGACAGCGTC 58.855 50.000 0.79 0.79 0.0 5.19 F
1288 1318 1.071471 CACCAACCTGCTCGACCTT 59.929 57.895 0.00 0.00 0.0 3.50 F
1465 1495 3.144120 CTCCGATGTGCCCTCCTCG 62.144 68.421 0.00 0.00 0.0 4.63 F
1791 1821 3.648067 CTCTTCCATTACATGCTCCCCTA 59.352 47.826 0.00 0.00 0.0 3.53 F
3157 3187 2.567615 GGCTTCTCTCTACCAGAAACCA 59.432 50.000 0.00 0.00 36.5 3.67 F
4883 5100 0.462047 CCTCTATCCCGTTGGTGCAC 60.462 60.000 8.80 8.80 0.0 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2464 2494 0.534203 TATCATTTCCCTTCCCGCGC 60.534 55.000 0.00 0.0 0.00 6.86 R
2614 2644 1.008424 CACGACACACTCAGCGACT 60.008 57.895 0.00 0.0 0.00 4.18 R
2686 2716 1.115930 AGCTAGGTATGCCCTGTCGG 61.116 60.000 0.00 0.0 45.81 4.79 R
3600 3638 0.465642 CCGAGGGAGGGGTATTTTGC 60.466 60.000 0.00 0.0 0.00 3.68 R
4913 5130 0.036765 TCGGCGCCAGTTACAGAAAT 60.037 50.000 28.98 0.0 0.00 2.17 R
6474 6705 0.250467 GCAGTGGCTCCTCTCAAACA 60.250 55.000 0.00 0.0 36.96 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 1.380403 CGAACAATATGCGGCCCCAA 61.380 55.000 0.00 0.00 0.00 4.12
139 140 5.407387 CAGTACGTACAACAACTTGCCTTAT 59.593 40.000 26.55 0.00 0.00 1.73
379 383 4.160329 TCCTCCAAAGACAGAGCTAGAAA 58.840 43.478 0.00 0.00 0.00 2.52
389 393 1.699634 AGAGCTAGAAAACACTGCCCA 59.300 47.619 0.00 0.00 0.00 5.36
397 401 2.664402 AAACACTGCCCATCTGTTCT 57.336 45.000 0.00 0.00 0.00 3.01
424 428 2.357637 TGTTTGTTAGCTGGTTGTCTGC 59.642 45.455 0.00 0.00 40.14 4.26
437 441 1.296649 GTCTGCCGCGCGAATTAAC 60.297 57.895 34.63 18.11 0.00 2.01
438 442 1.738464 TCTGCCGCGCGAATTAACA 60.738 52.632 34.63 17.20 0.00 2.41
456 460 3.550974 AGGCATATCCTTCCGCGT 58.449 55.556 4.92 0.00 44.75 6.01
491 495 3.496675 TCCGTCTCGATGGATGACT 57.503 52.632 3.76 0.00 41.36 3.41
507 511 1.273267 TGACTGTCTGCCTACCTGGAT 60.273 52.381 9.51 0.00 38.35 3.41
646 660 1.144969 TCAAATTCGTGGACAGCGTC 58.855 50.000 0.79 0.79 0.00 5.19
667 681 2.034879 GCCCAGTCACGGACACATG 61.035 63.158 6.78 0.00 34.60 3.21
668 682 1.671166 CCCAGTCACGGACACATGA 59.329 57.895 0.00 0.00 34.60 3.07
743 768 2.727647 GCTATCGCTGTCGCTCGG 60.728 66.667 0.00 0.00 35.26 4.63
1009 1034 4.691359 AGGGTCCACTACGCCGGT 62.691 66.667 1.90 0.00 41.88 5.28
1068 1093 3.474570 GACCAGGAGGCAGGCGAT 61.475 66.667 0.00 0.00 39.06 4.58
1141 1167 3.411517 CCACTTCGCCTCCCCCAT 61.412 66.667 0.00 0.00 0.00 4.00
1142 1168 2.677228 CACTTCGCCTCCCCCATT 59.323 61.111 0.00 0.00 0.00 3.16
1143 1169 1.452108 CACTTCGCCTCCCCCATTC 60.452 63.158 0.00 0.00 0.00 2.67
1215 1245 5.945155 GTTTGGATAAAACACTCGCCATTA 58.055 37.500 0.00 0.00 46.30 1.90
1288 1318 1.071471 CACCAACCTGCTCGACCTT 59.929 57.895 0.00 0.00 0.00 3.50
1465 1495 3.144120 CTCCGATGTGCCCTCCTCG 62.144 68.421 0.00 0.00 0.00 4.63
1507 1537 4.021925 GTCGCCAACCAGCTCCCT 62.022 66.667 0.00 0.00 0.00 4.20
1791 1821 3.648067 CTCTTCCATTACATGCTCCCCTA 59.352 47.826 0.00 0.00 0.00 3.53
2584 2614 3.750371 TGTTCTCATTGACCGGAATGTT 58.250 40.909 9.46 0.00 35.25 2.71
2614 2644 6.483307 GTGTGGAGAAGCTTGCATATTATACA 59.517 38.462 2.10 0.00 0.00 2.29
2686 2716 4.067896 CCCCATATGAGTACATTGTCTGC 58.932 47.826 3.65 0.00 37.87 4.26
3157 3187 2.567615 GGCTTCTCTCTACCAGAAACCA 59.432 50.000 0.00 0.00 36.50 3.67
3354 3384 8.725148 ACTGTTCTACATTTTGCTTCAGATTAG 58.275 33.333 0.00 0.00 0.00 1.73
3407 3437 9.016438 GTAATAGGAATAGGAGTCTAGGTCAAG 57.984 40.741 0.00 0.00 0.00 3.02
3571 3609 3.474920 ACTCCCTCCATGAAATTAGGGT 58.525 45.455 8.31 0.00 44.19 4.34
3589 3627 3.852578 AGGGTGTCAAGTGGGAGAATAAT 59.147 43.478 0.00 0.00 0.00 1.28
3600 3638 1.869767 GGAGAATAATGCAGTGCTCGG 59.130 52.381 17.60 0.00 0.00 4.63
3667 3705 0.728542 CTGTCGCTGCATGCACATAA 59.271 50.000 18.46 0.00 43.06 1.90
3687 3725 1.026182 CACGATTGGCTAAGGCTGCA 61.026 55.000 0.50 0.00 38.73 4.41
3833 3872 6.127366 TGGGAAAATAAACTGCATGAGATTCC 60.127 38.462 0.00 0.00 33.52 3.01
3846 3885 2.632377 GAGATTCCCTCAATTGTCGCA 58.368 47.619 5.13 0.00 41.58 5.10
3847 3886 2.352960 GAGATTCCCTCAATTGTCGCAC 59.647 50.000 5.13 0.00 41.58 5.34
3885 3957 4.018490 TGTAATGACCAACTAGCGGAGTA 58.982 43.478 5.81 0.00 37.44 2.59
3886 3958 3.521947 AATGACCAACTAGCGGAGTAC 57.478 47.619 5.81 0.00 37.44 2.73
3887 3959 1.913778 TGACCAACTAGCGGAGTACA 58.086 50.000 5.81 0.00 37.44 2.90
3889 3961 2.165641 TGACCAACTAGCGGAGTACATG 59.834 50.000 5.81 0.00 37.44 3.21
4106 4205 5.772393 TTGTTTCCATATGTAGGTGGACT 57.228 39.130 1.24 0.00 43.85 3.85
4364 4463 2.034558 CGGCCAGTTCATTGTTGAAGTT 59.965 45.455 2.24 0.00 41.72 2.66
4419 4518 4.842531 TCCATTAGATGAGCTCACCAAA 57.157 40.909 20.97 13.39 0.00 3.28
4621 4836 3.658725 AGTAATATGGTGTGCTCCCTCT 58.341 45.455 0.00 0.00 0.00 3.69
4625 4840 1.557269 ATGGTGTGCTCCCTCTGTCC 61.557 60.000 0.00 0.00 0.00 4.02
4675 4890 2.548480 GCATGCCCGTAATTCTAAGTCC 59.452 50.000 6.36 0.00 0.00 3.85
4726 4941 3.234630 TTTGGCTGGCGCTACGTCT 62.235 57.895 7.64 0.00 36.09 4.18
4734 4949 1.084370 GGCGCTACGTCTGCTGATTT 61.084 55.000 7.64 0.00 0.00 2.17
4762 4977 0.914644 AATTAGCCAGAGGAGCTGCA 59.085 50.000 8.35 0.00 43.50 4.41
4784 4999 4.039092 ATGCAAGCGTGAGGGGCT 62.039 61.111 2.99 0.00 44.02 5.19
4806 5021 4.317671 AGGCTGCATGCAGAATTTAATC 57.682 40.909 44.02 25.94 46.30 1.75
4807 5022 3.047796 GGCTGCATGCAGAATTTAATCG 58.952 45.455 44.02 20.07 46.30 3.34
4819 5034 6.081049 CAGAATTTAATCGGTTACGTTTGCA 58.919 36.000 0.00 0.00 41.85 4.08
4827 5042 5.804692 TCGGTTACGTTTGCATAATTGAT 57.195 34.783 0.00 0.00 41.85 2.57
4857 5072 7.651304 ACGACAAATGCATGTCTGATTTAAAAA 59.349 29.630 16.31 0.00 45.98 1.94
4874 5091 7.875327 TTTAAAAATTCCTTCCTCTATCCCG 57.125 36.000 0.00 0.00 0.00 5.14
4883 5100 0.462047 CCTCTATCCCGTTGGTGCAC 60.462 60.000 8.80 8.80 0.00 4.57
4899 5116 2.911509 ACGTGGCCAGCATTGCAA 60.912 55.556 5.11 0.00 0.00 4.08
4913 5130 6.334989 CAGCATTGCAAGAGGAATTAAATCA 58.665 36.000 11.91 0.00 33.08 2.57
4927 5144 8.470002 AGGAATTAAATCATTTCTGTAACTGGC 58.530 33.333 0.00 0.00 0.00 4.85
4955 5172 6.088085 CGAGTTAATTTTGCATTGGTCTCAAC 59.912 38.462 0.00 0.00 35.48 3.18
5104 5321 5.843673 TGTGAATGCCTTTCAGTTTTACA 57.156 34.783 0.00 0.00 44.89 2.41
5113 5330 8.644374 TGCCTTTCAGTTTTACATTAGGTAAT 57.356 30.769 0.00 0.00 41.43 1.89
5254 5471 7.730364 ACTGTCCTTGTTTAGTTTACATGAG 57.270 36.000 0.00 0.00 0.00 2.90
5255 5472 7.280356 ACTGTCCTTGTTTAGTTTACATGAGT 58.720 34.615 0.00 0.00 0.00 3.41
5354 5578 8.504812 TGTCATTCGATCAGAAATATGGAAAA 57.495 30.769 4.52 0.00 42.91 2.29
5411 5636 7.095649 GGTTTTATTTGTTCTGATCTTTGCACC 60.096 37.037 0.00 0.00 0.00 5.01
5435 5660 5.343249 GCTGCTGAATTTCCATTAATTCGT 58.657 37.500 0.00 0.00 43.99 3.85
5442 5667 8.894768 TGAATTTCCATTAATTCGTTTGGTTT 57.105 26.923 0.00 0.00 43.99 3.27
5467 5692 3.389983 TCTTTGTACTGCAGGGTGTTAGT 59.610 43.478 19.93 0.00 0.00 2.24
5482 5707 6.099413 AGGGTGTTAGTAAAGGTCTTATAGCC 59.901 42.308 0.00 0.00 0.00 3.93
5495 5720 6.778559 AGGTCTTATAGCCGAGAAGATACTTT 59.221 38.462 0.00 0.00 37.70 2.66
5496 5721 7.288158 AGGTCTTATAGCCGAGAAGATACTTTT 59.712 37.037 0.00 0.00 37.70 2.27
5557 5782 8.790718 GTTTTATGCATTGGTGATGATAGATCT 58.209 33.333 3.54 0.00 38.03 2.75
5671 5896 2.290323 ACCGAGCAAAGCCAAGTTCTAT 60.290 45.455 0.00 0.00 0.00 1.98
5779 6004 2.382882 CTGGCTACATCAGTCTCCTCA 58.617 52.381 0.00 0.00 0.00 3.86
5789 6014 5.896106 ACATCAGTCTCCTCATTAGACATCA 59.104 40.000 6.06 0.00 44.77 3.07
5832 6057 9.482627 GTTCAGTAATACAAGGATAGAAGGATG 57.517 37.037 0.00 0.00 0.00 3.51
5901 6126 9.774742 CTAAAACTATTTTCTTTGATCCGAAGG 57.225 33.333 6.21 0.00 41.05 3.46
6024 6250 0.771127 TTTCTCCTGGTGGACAAGGG 59.229 55.000 0.08 0.00 37.46 3.95
6062 6288 1.561542 CTGCAAGGAGAGGGGTTACAT 59.438 52.381 0.00 0.00 0.00 2.29
6091 6317 2.859032 GCTACAATAGCCTCGTTCCTCG 60.859 54.545 0.00 0.00 45.95 4.63
6155 6381 5.636543 TCATATGTGCATAGCTGATCTTTCG 59.363 40.000 1.90 0.00 0.00 3.46
6174 6400 1.466167 CGTGCTCCCATGTTTCTCTTG 59.534 52.381 0.00 0.00 0.00 3.02
6202 6428 4.832248 TCCGTGATATGGAGAATATTGGC 58.168 43.478 0.00 0.00 31.22 4.52
6213 6439 4.036380 GGAGAATATTGGCGTTAAACCTGG 59.964 45.833 0.00 0.00 0.00 4.45
6214 6440 3.951680 AGAATATTGGCGTTAAACCTGGG 59.048 43.478 0.00 0.00 0.00 4.45
6317 6546 0.534877 ATGTTGCGCAGGTGTCTGAA 60.535 50.000 11.31 0.00 43.49 3.02
6380 6609 4.020218 TGTGCACCCTTATATCTGGCTATC 60.020 45.833 15.69 0.00 0.00 2.08
6453 6684 2.742774 TCGTATTGCTGATGATCACCG 58.257 47.619 0.00 0.00 0.00 4.94
6530 6772 0.392863 CTTCGCCATGTCCATGTCCA 60.393 55.000 6.53 0.00 37.11 4.02
6706 6956 5.537300 TTCCTAGCTGATGATACTTGACC 57.463 43.478 0.00 0.00 0.00 4.02
6713 6963 2.362397 TGATGATACTTGACCCTCGCTC 59.638 50.000 0.00 0.00 0.00 5.03
6753 7003 7.166473 GCTTATAAATGTTTTGCTCGAATGAGG 59.834 37.037 0.00 0.00 42.79 3.86
6776 7026 0.392193 CACAGCGCAGGGAGATTTCT 60.392 55.000 11.47 0.00 0.00 2.52
6801 7051 1.790623 CATTTTCAAGTGCAGCACAGC 59.209 47.619 27.35 0.16 36.74 4.40
6802 7052 0.248580 TTTTCAAGTGCAGCACAGCG 60.249 50.000 27.35 14.53 36.74 5.18
6803 7053 2.666715 TTTCAAGTGCAGCACAGCGC 62.667 55.000 27.35 0.00 45.04 5.92
6825 7075 4.816925 GCAGGGAGATTGACATAAACCTAC 59.183 45.833 0.00 0.00 0.00 3.18
6826 7076 5.050490 CAGGGAGATTGACATAAACCTACG 58.950 45.833 0.00 0.00 0.00 3.51
6827 7077 4.101119 AGGGAGATTGACATAAACCTACGG 59.899 45.833 0.00 0.00 0.00 4.02
6828 7078 4.377897 GGAGATTGACATAAACCTACGGG 58.622 47.826 0.00 0.00 38.88 5.28
6829 7079 4.100498 GGAGATTGACATAAACCTACGGGA 59.900 45.833 0.00 0.00 36.25 5.14
6830 7080 5.395990 GGAGATTGACATAAACCTACGGGAA 60.396 44.000 0.00 0.00 36.25 3.97
6831 7081 6.248569 AGATTGACATAAACCTACGGGAAT 57.751 37.500 0.00 0.00 36.25 3.01
6832 7082 6.055588 AGATTGACATAAACCTACGGGAATG 58.944 40.000 0.00 0.00 36.25 2.67
6833 7083 3.537580 TGACATAAACCTACGGGAATGC 58.462 45.455 0.00 0.00 36.25 3.56
6834 7084 3.055021 TGACATAAACCTACGGGAATGCA 60.055 43.478 0.00 0.00 36.25 3.96
6835 7085 4.134563 GACATAAACCTACGGGAATGCAT 58.865 43.478 0.00 0.00 36.25 3.96
6836 7086 5.163290 TGACATAAACCTACGGGAATGCATA 60.163 40.000 0.00 0.00 36.25 3.14
6837 7087 5.305585 ACATAAACCTACGGGAATGCATAG 58.694 41.667 0.00 0.00 36.25 2.23
6838 7088 2.930826 AACCTACGGGAATGCATAGG 57.069 50.000 9.03 9.03 40.16 2.57
6839 7089 1.056660 ACCTACGGGAATGCATAGGG 58.943 55.000 14.08 5.69 38.86 3.53
6840 7090 0.321653 CCTACGGGAATGCATAGGGC 60.322 60.000 0.00 0.00 37.72 5.19
6841 7091 2.993589 CCTACGGGAATGCATAGGGCA 61.994 57.143 0.00 0.00 46.68 5.36
6879 7129 8.703604 TTCTAGTTATTGCACATCTAAGTGAC 57.296 34.615 0.00 0.00 42.05 3.67
6880 7130 8.067751 TCTAGTTATTGCACATCTAAGTGACT 57.932 34.615 0.00 0.00 42.05 3.41
6881 7131 8.191446 TCTAGTTATTGCACATCTAAGTGACTC 58.809 37.037 0.00 0.00 42.05 3.36
6882 7132 6.701340 AGTTATTGCACATCTAAGTGACTCA 58.299 36.000 0.00 0.00 42.05 3.41
6883 7133 7.161404 AGTTATTGCACATCTAAGTGACTCAA 58.839 34.615 0.00 0.00 42.05 3.02
6884 7134 7.826252 AGTTATTGCACATCTAAGTGACTCAAT 59.174 33.333 0.00 0.00 42.05 2.57
6885 7135 8.454106 GTTATTGCACATCTAAGTGACTCAATT 58.546 33.333 0.00 0.00 42.05 2.32
6886 7136 9.665719 TTATTGCACATCTAAGTGACTCAATTA 57.334 29.630 0.00 0.00 42.05 1.40
6887 7137 7.977789 TTGCACATCTAAGTGACTCAATTAA 57.022 32.000 0.94 0.00 42.05 1.40
6888 7138 7.601073 TGCACATCTAAGTGACTCAATTAAG 57.399 36.000 0.94 0.00 42.05 1.85
6889 7139 6.092670 TGCACATCTAAGTGACTCAATTAAGC 59.907 38.462 0.94 2.06 42.05 3.09
6890 7140 6.092670 GCACATCTAAGTGACTCAATTAAGCA 59.907 38.462 0.94 0.00 42.05 3.91
6891 7141 7.201679 GCACATCTAAGTGACTCAATTAAGCAT 60.202 37.037 0.94 0.00 42.05 3.79
6892 7142 8.333908 CACATCTAAGTGACTCAATTAAGCATC 58.666 37.037 0.94 0.00 42.05 3.91
6893 7143 8.043113 ACATCTAAGTGACTCAATTAAGCATCA 58.957 33.333 0.94 0.00 0.00 3.07
6894 7144 8.886719 CATCTAAGTGACTCAATTAAGCATCAA 58.113 33.333 0.94 0.00 0.00 2.57
6895 7145 8.846943 TCTAAGTGACTCAATTAAGCATCAAA 57.153 30.769 0.94 0.00 0.00 2.69
6896 7146 9.283768 TCTAAGTGACTCAATTAAGCATCAAAA 57.716 29.630 0.94 0.00 0.00 2.44
6897 7147 9.552114 CTAAGTGACTCAATTAAGCATCAAAAG 57.448 33.333 0.94 0.00 0.00 2.27
6898 7148 6.917533 AGTGACTCAATTAAGCATCAAAAGG 58.082 36.000 0.00 0.00 0.00 3.11
6899 7149 6.716628 AGTGACTCAATTAAGCATCAAAAGGA 59.283 34.615 0.00 0.00 0.00 3.36
6900 7150 7.231317 AGTGACTCAATTAAGCATCAAAAGGAA 59.769 33.333 0.00 0.00 0.00 3.36
6901 7151 7.867403 GTGACTCAATTAAGCATCAAAAGGAAA 59.133 33.333 0.00 0.00 0.00 3.13
6902 7152 8.420222 TGACTCAATTAAGCATCAAAAGGAAAA 58.580 29.630 0.00 0.00 0.00 2.29
6903 7153 8.822652 ACTCAATTAAGCATCAAAAGGAAAAG 57.177 30.769 0.00 0.00 0.00 2.27
6904 7154 8.641541 ACTCAATTAAGCATCAAAAGGAAAAGA 58.358 29.630 0.00 0.00 0.00 2.52
6905 7155 9.480053 CTCAATTAAGCATCAAAAGGAAAAGAA 57.520 29.630 0.00 0.00 0.00 2.52
6906 7156 9.829507 TCAATTAAGCATCAAAAGGAAAAGAAA 57.170 25.926 0.00 0.00 0.00 2.52
6930 7180 6.904463 AAAATAAAATACCCACACGAACCT 57.096 33.333 0.00 0.00 0.00 3.50
6931 7181 6.904463 AAATAAAATACCCACACGAACCTT 57.096 33.333 0.00 0.00 0.00 3.50
6932 7182 6.904463 AATAAAATACCCACACGAACCTTT 57.096 33.333 0.00 0.00 0.00 3.11
6933 7183 7.999450 AATAAAATACCCACACGAACCTTTA 57.001 32.000 0.00 0.00 0.00 1.85
6934 7184 8.584063 AATAAAATACCCACACGAACCTTTAT 57.416 30.769 0.00 0.00 0.00 1.40
6935 7185 5.890424 AAATACCCACACGAACCTTTATG 57.110 39.130 0.00 0.00 0.00 1.90
6936 7186 2.943036 ACCCACACGAACCTTTATGT 57.057 45.000 0.00 0.00 0.00 2.29
6937 7187 5.680594 ATACCCACACGAACCTTTATGTA 57.319 39.130 0.00 0.00 0.00 2.29
6938 7188 4.354893 ACCCACACGAACCTTTATGTAA 57.645 40.909 0.00 0.00 0.00 2.41
6939 7189 4.320870 ACCCACACGAACCTTTATGTAAG 58.679 43.478 0.00 0.00 0.00 2.34
6940 7190 4.040706 ACCCACACGAACCTTTATGTAAGA 59.959 41.667 0.00 0.00 35.80 2.10
6941 7191 5.183228 CCCACACGAACCTTTATGTAAGAT 58.817 41.667 0.00 0.00 35.80 2.40
6942 7192 5.293569 CCCACACGAACCTTTATGTAAGATC 59.706 44.000 0.00 0.00 35.80 2.75
6943 7193 5.872617 CCACACGAACCTTTATGTAAGATCA 59.127 40.000 0.00 0.00 35.80 2.92
6944 7194 6.370442 CCACACGAACCTTTATGTAAGATCAA 59.630 38.462 0.00 0.00 35.80 2.57
6945 7195 7.065803 CCACACGAACCTTTATGTAAGATCAAT 59.934 37.037 0.00 0.00 35.80 2.57
6946 7196 7.904977 CACACGAACCTTTATGTAAGATCAATG 59.095 37.037 0.00 0.00 35.80 2.82
6947 7197 6.907212 CACGAACCTTTATGTAAGATCAATGC 59.093 38.462 0.00 0.00 35.80 3.56
6948 7198 6.038271 ACGAACCTTTATGTAAGATCAATGCC 59.962 38.462 0.00 0.00 35.80 4.40
6949 7199 6.038161 CGAACCTTTATGTAAGATCAATGCCA 59.962 38.462 0.00 0.00 35.80 4.92
6950 7200 7.255242 CGAACCTTTATGTAAGATCAATGCCAT 60.255 37.037 0.00 0.00 35.80 4.40
6951 7201 8.995027 AACCTTTATGTAAGATCAATGCCATA 57.005 30.769 0.00 0.00 35.80 2.74
6952 7202 9.592196 AACCTTTATGTAAGATCAATGCCATAT 57.408 29.630 0.00 0.00 35.80 1.78
6953 7203 9.017509 ACCTTTATGTAAGATCAATGCCATATG 57.982 33.333 0.00 0.00 35.80 1.78
6954 7204 9.234827 CCTTTATGTAAGATCAATGCCATATGA 57.765 33.333 3.65 0.00 35.80 2.15
6965 7215 9.894783 GATCAATGCCATATGATTTAGATATGC 57.105 33.333 3.65 0.00 36.45 3.14
6966 7216 8.810990 TCAATGCCATATGATTTAGATATGCA 57.189 30.769 3.65 1.28 33.93 3.96
6967 7217 9.245481 TCAATGCCATATGATTTAGATATGCAA 57.755 29.630 3.65 0.00 33.93 4.08
6971 7221 9.910267 TGCCATATGATTTAGATATGCAATACT 57.090 29.630 3.65 0.00 33.93 2.12
6978 7228 9.737844 TGATTTAGATATGCAATACTTATGGCA 57.262 29.630 0.69 0.69 45.92 4.92
6979 7229 9.994432 GATTTAGATATGCAATACTTATGGCAC 57.006 33.333 0.16 0.00 44.77 5.01
6980 7230 8.916628 TTTAGATATGCAATACTTATGGCACA 57.083 30.769 0.16 0.00 44.77 4.57
6981 7231 9.519191 TTTAGATATGCAATACTTATGGCACAT 57.481 29.630 0.16 0.00 44.77 3.21
6982 7232 7.621428 AGATATGCAATACTTATGGCACATC 57.379 36.000 8.33 8.33 44.77 3.06
6983 7233 7.400439 AGATATGCAATACTTATGGCACATCT 58.600 34.615 11.99 11.99 46.66 2.90
6984 7234 8.722480 GATATGCAATACTTATGGCACATCTA 57.278 34.615 8.94 0.00 44.77 1.98
6985 7235 8.728337 ATATGCAATACTTATGGCACATCTAG 57.272 34.615 0.16 0.00 44.77 2.43
6986 7236 6.772605 ATGCAATACTTATGGCACATCTAGA 58.227 36.000 0.16 0.00 44.77 2.43
6987 7237 7.400439 ATGCAATACTTATGGCACATCTAGAT 58.600 34.615 0.00 0.00 44.77 1.98
6988 7238 7.336176 ATGCAATACTTATGGCACATCTAGATG 59.664 37.037 27.63 27.63 44.77 2.90
7004 7254 8.665175 CATCTAGATGTGCTTTAACAAAACTG 57.335 34.615 22.42 0.00 34.23 3.16
7005 7255 7.801716 TCTAGATGTGCTTTAACAAAACTGT 57.198 32.000 0.00 0.00 32.81 3.55
7006 7256 8.896320 TCTAGATGTGCTTTAACAAAACTGTA 57.104 30.769 0.00 0.00 32.81 2.74
7007 7257 9.332502 TCTAGATGTGCTTTAACAAAACTGTAA 57.667 29.630 0.00 0.00 32.81 2.41
7008 7258 9.944663 CTAGATGTGCTTTAACAAAACTGTAAA 57.055 29.630 0.00 0.00 32.81 2.01
7009 7259 8.628882 AGATGTGCTTTAACAAAACTGTAAAC 57.371 30.769 0.00 0.00 32.81 2.01
7010 7260 7.704899 AGATGTGCTTTAACAAAACTGTAAACC 59.295 33.333 0.00 0.00 32.81 3.27
7011 7261 6.926313 TGTGCTTTAACAAAACTGTAAACCT 58.074 32.000 0.00 0.00 0.00 3.50
7012 7262 8.053026 TGTGCTTTAACAAAACTGTAAACCTA 57.947 30.769 0.00 0.00 0.00 3.08
7013 7263 8.688151 TGTGCTTTAACAAAACTGTAAACCTAT 58.312 29.630 0.00 0.00 0.00 2.57
7014 7264 9.524106 GTGCTTTAACAAAACTGTAAACCTATT 57.476 29.630 0.00 0.00 0.00 1.73
7019 7269 9.733219 TTAACAAAACTGTAAACCTATTTTCCG 57.267 29.630 0.00 0.00 0.00 4.30
7020 7270 7.337480 ACAAAACTGTAAACCTATTTTCCGT 57.663 32.000 0.00 0.00 0.00 4.69
7021 7271 7.420002 ACAAAACTGTAAACCTATTTTCCGTC 58.580 34.615 0.00 0.00 0.00 4.79
7022 7272 6.564709 AAACTGTAAACCTATTTTCCGTCC 57.435 37.500 0.00 0.00 0.00 4.79
7023 7273 5.231702 ACTGTAAACCTATTTTCCGTCCA 57.768 39.130 0.00 0.00 0.00 4.02
7024 7274 5.812286 ACTGTAAACCTATTTTCCGTCCAT 58.188 37.500 0.00 0.00 0.00 3.41
7025 7275 5.878669 ACTGTAAACCTATTTTCCGTCCATC 59.121 40.000 0.00 0.00 0.00 3.51
7026 7276 5.806818 TGTAAACCTATTTTCCGTCCATCA 58.193 37.500 0.00 0.00 0.00 3.07
7027 7277 6.419791 TGTAAACCTATTTTCCGTCCATCAT 58.580 36.000 0.00 0.00 0.00 2.45
7028 7278 6.540914 TGTAAACCTATTTTCCGTCCATCATC 59.459 38.462 0.00 0.00 0.00 2.92
7029 7279 4.771114 ACCTATTTTCCGTCCATCATCA 57.229 40.909 0.00 0.00 0.00 3.07
7030 7280 5.310409 ACCTATTTTCCGTCCATCATCAT 57.690 39.130 0.00 0.00 0.00 2.45
7031 7281 5.694995 ACCTATTTTCCGTCCATCATCATT 58.305 37.500 0.00 0.00 0.00 2.57
7032 7282 6.837312 ACCTATTTTCCGTCCATCATCATTA 58.163 36.000 0.00 0.00 0.00 1.90
7033 7283 6.936900 ACCTATTTTCCGTCCATCATCATTAG 59.063 38.462 0.00 0.00 0.00 1.73
7034 7284 7.161404 CCTATTTTCCGTCCATCATCATTAGA 58.839 38.462 0.00 0.00 0.00 2.10
7035 7285 7.661437 CCTATTTTCCGTCCATCATCATTAGAA 59.339 37.037 0.00 0.00 0.00 2.10
7036 7286 6.677781 TTTTCCGTCCATCATCATTAGAAC 57.322 37.500 0.00 0.00 0.00 3.01
7037 7287 5.614324 TTCCGTCCATCATCATTAGAACT 57.386 39.130 0.00 0.00 0.00 3.01
7038 7288 5.614324 TCCGTCCATCATCATTAGAACTT 57.386 39.130 0.00 0.00 0.00 2.66
7039 7289 5.359756 TCCGTCCATCATCATTAGAACTTG 58.640 41.667 0.00 0.00 0.00 3.16
7040 7290 4.512944 CCGTCCATCATCATTAGAACTTGG 59.487 45.833 0.00 0.00 0.00 3.61
7041 7291 5.359756 CGTCCATCATCATTAGAACTTGGA 58.640 41.667 0.00 0.00 30.85 3.53
7042 7292 5.817296 CGTCCATCATCATTAGAACTTGGAA 59.183 40.000 0.00 0.00 33.46 3.53
7043 7293 6.484643 CGTCCATCATCATTAGAACTTGGAAT 59.515 38.462 0.00 0.00 33.46 3.01
7044 7294 7.519488 CGTCCATCATCATTAGAACTTGGAATG 60.519 40.741 0.00 0.00 33.46 2.67
7045 7295 7.500227 GTCCATCATCATTAGAACTTGGAATGA 59.500 37.037 0.00 0.00 42.22 2.57
7046 7296 8.222637 TCCATCATCATTAGAACTTGGAATGAT 58.777 33.333 3.99 3.99 46.35 2.45
7047 7297 8.857098 CCATCATCATTAGAACTTGGAATGATT 58.143 33.333 6.60 0.00 44.19 2.57
7083 7333 7.187244 CTTATGTCAACTCATAAGGCTGATG 57.813 40.000 5.39 5.39 46.27 3.07
7084 7334 4.824479 TGTCAACTCATAAGGCTGATGA 57.176 40.909 13.96 13.96 0.00 2.92
7085 7335 5.363562 TGTCAACTCATAAGGCTGATGAT 57.636 39.130 15.00 0.00 32.96 2.45
7086 7336 6.484364 TGTCAACTCATAAGGCTGATGATA 57.516 37.500 15.00 0.00 32.96 2.15
7087 7337 6.888105 TGTCAACTCATAAGGCTGATGATAA 58.112 36.000 15.00 0.00 32.96 1.75
7088 7338 6.988580 TGTCAACTCATAAGGCTGATGATAAG 59.011 38.462 15.00 6.53 32.96 1.73
7089 7339 6.989169 GTCAACTCATAAGGCTGATGATAAGT 59.011 38.462 15.00 7.16 32.96 2.24
7090 7340 8.144478 GTCAACTCATAAGGCTGATGATAAGTA 58.856 37.037 15.00 0.00 32.96 2.24
7091 7341 8.704668 TCAACTCATAAGGCTGATGATAAGTAA 58.295 33.333 15.00 0.50 32.96 2.24
7092 7342 8.986847 CAACTCATAAGGCTGATGATAAGTAAG 58.013 37.037 15.00 4.45 32.96 2.34
7093 7343 7.675062 ACTCATAAGGCTGATGATAAGTAAGG 58.325 38.462 15.00 3.75 32.96 2.69
7094 7344 7.291182 ACTCATAAGGCTGATGATAAGTAAGGT 59.709 37.037 15.00 4.36 32.96 3.50
7095 7345 7.671302 TCATAAGGCTGATGATAAGTAAGGTC 58.329 38.462 10.67 0.00 0.00 3.85
7096 7346 7.510685 TCATAAGGCTGATGATAAGTAAGGTCT 59.489 37.037 10.67 0.00 0.00 3.85
7097 7347 5.799827 AGGCTGATGATAAGTAAGGTCTC 57.200 43.478 0.00 0.00 0.00 3.36
7098 7348 4.591072 AGGCTGATGATAAGTAAGGTCTCC 59.409 45.833 0.00 0.00 0.00 3.71
7099 7349 4.591072 GGCTGATGATAAGTAAGGTCTCCT 59.409 45.833 0.00 0.00 33.87 3.69
7100 7350 5.775701 GGCTGATGATAAGTAAGGTCTCCTA 59.224 44.000 0.00 0.00 31.13 2.94
7101 7351 6.071616 GGCTGATGATAAGTAAGGTCTCCTAG 60.072 46.154 0.00 0.00 31.13 3.02
7102 7352 6.492087 GCTGATGATAAGTAAGGTCTCCTAGT 59.508 42.308 0.00 0.00 31.13 2.57
7103 7353 7.014808 GCTGATGATAAGTAAGGTCTCCTAGTT 59.985 40.741 0.00 0.00 31.13 2.24
7104 7354 8.239038 TGATGATAAGTAAGGTCTCCTAGTTG 57.761 38.462 0.00 0.00 31.13 3.16
7105 7355 7.839705 TGATGATAAGTAAGGTCTCCTAGTTGT 59.160 37.037 0.00 0.00 31.13 3.32
7106 7356 9.352191 GATGATAAGTAAGGTCTCCTAGTTGTA 57.648 37.037 0.00 0.00 31.13 2.41
7107 7357 9.884814 ATGATAAGTAAGGTCTCCTAGTTGTAT 57.115 33.333 0.00 0.00 31.13 2.29
7108 7358 9.710818 TGATAAGTAAGGTCTCCTAGTTGTATT 57.289 33.333 0.00 0.00 31.13 1.89
7112 7362 8.431910 AGTAAGGTCTCCTAGTTGTATTTTGA 57.568 34.615 0.00 0.00 31.13 2.69
7113 7363 8.312564 AGTAAGGTCTCCTAGTTGTATTTTGAC 58.687 37.037 0.00 0.00 31.13 3.18
7114 7364 6.051179 AGGTCTCCTAGTTGTATTTTGACC 57.949 41.667 0.00 0.00 41.00 4.02
7115 7365 4.868734 GGTCTCCTAGTTGTATTTTGACCG 59.131 45.833 0.00 0.00 33.34 4.79
7116 7366 5.476614 GTCTCCTAGTTGTATTTTGACCGT 58.523 41.667 0.00 0.00 0.00 4.83
7117 7367 5.930569 GTCTCCTAGTTGTATTTTGACCGTT 59.069 40.000 0.00 0.00 0.00 4.44
7118 7368 6.090493 GTCTCCTAGTTGTATTTTGACCGTTC 59.910 42.308 0.00 0.00 0.00 3.95
7119 7369 5.240121 TCCTAGTTGTATTTTGACCGTTCC 58.760 41.667 0.00 0.00 0.00 3.62
7120 7370 4.393990 CCTAGTTGTATTTTGACCGTTCCC 59.606 45.833 0.00 0.00 0.00 3.97
7121 7371 3.151554 AGTTGTATTTTGACCGTTCCCC 58.848 45.455 0.00 0.00 0.00 4.81
7122 7372 3.151554 GTTGTATTTTGACCGTTCCCCT 58.848 45.455 0.00 0.00 0.00 4.79
7123 7373 4.041938 AGTTGTATTTTGACCGTTCCCCTA 59.958 41.667 0.00 0.00 0.00 3.53
7124 7374 4.637387 TGTATTTTGACCGTTCCCCTAA 57.363 40.909 0.00 0.00 0.00 2.69
7125 7375 4.983053 TGTATTTTGACCGTTCCCCTAAA 58.017 39.130 0.00 0.00 0.00 1.85
7126 7376 5.383476 TGTATTTTGACCGTTCCCCTAAAA 58.617 37.500 0.00 0.00 0.00 1.52
7127 7377 5.832060 TGTATTTTGACCGTTCCCCTAAAAA 59.168 36.000 0.00 0.00 0.00 1.94
7150 7400 8.710835 AAAAAGTTGTGTTTCACCGATTTATT 57.289 26.923 0.00 0.00 32.73 1.40
7151 7401 7.924103 AAAGTTGTGTTTCACCGATTTATTC 57.076 32.000 0.00 0.00 32.73 1.75
7152 7402 6.627395 AGTTGTGTTTCACCGATTTATTCA 57.373 33.333 0.00 0.00 32.73 2.57
7153 7403 7.214467 AGTTGTGTTTCACCGATTTATTCAT 57.786 32.000 0.00 0.00 32.73 2.57
7154 7404 7.305474 AGTTGTGTTTCACCGATTTATTCATC 58.695 34.615 0.00 0.00 32.73 2.92
7155 7405 6.809630 TGTGTTTCACCGATTTATTCATCA 57.190 33.333 0.00 0.00 32.73 3.07
7156 7406 6.607689 TGTGTTTCACCGATTTATTCATCAC 58.392 36.000 0.00 0.00 32.73 3.06
7157 7407 5.732647 GTGTTTCACCGATTTATTCATCACG 59.267 40.000 0.00 0.00 0.00 4.35
7158 7408 5.639931 TGTTTCACCGATTTATTCATCACGA 59.360 36.000 0.00 0.00 0.00 4.35
7159 7409 5.966636 TTCACCGATTTATTCATCACGAG 57.033 39.130 0.00 0.00 0.00 4.18
7160 7410 3.802139 TCACCGATTTATTCATCACGAGC 59.198 43.478 0.00 0.00 0.00 5.03
7161 7411 3.059597 CACCGATTTATTCATCACGAGCC 60.060 47.826 0.00 0.00 0.00 4.70
7162 7412 3.181465 ACCGATTTATTCATCACGAGCCT 60.181 43.478 0.00 0.00 0.00 4.58
7163 7413 3.185188 CCGATTTATTCATCACGAGCCTG 59.815 47.826 0.00 0.00 0.00 4.85
7164 7414 3.185188 CGATTTATTCATCACGAGCCTGG 59.815 47.826 0.00 0.00 0.00 4.45
7165 7415 2.620251 TTATTCATCACGAGCCTGGG 57.380 50.000 0.00 0.00 0.00 4.45
7166 7416 0.758734 TATTCATCACGAGCCTGGGG 59.241 55.000 0.00 0.00 0.00 4.96
7167 7417 0.982852 ATTCATCACGAGCCTGGGGA 60.983 55.000 0.00 0.00 0.00 4.81
7168 7418 1.198094 TTCATCACGAGCCTGGGGAA 61.198 55.000 0.00 0.00 0.00 3.97
7169 7419 1.153289 CATCACGAGCCTGGGGAAG 60.153 63.158 0.00 0.00 0.00 3.46
7170 7420 1.306141 ATCACGAGCCTGGGGAAGA 60.306 57.895 0.00 0.00 0.00 2.87
7171 7421 0.909610 ATCACGAGCCTGGGGAAGAA 60.910 55.000 0.00 0.00 0.00 2.52
7172 7422 0.909610 TCACGAGCCTGGGGAAGAAT 60.910 55.000 0.00 0.00 0.00 2.40
7173 7423 0.830648 CACGAGCCTGGGGAAGAATA 59.169 55.000 0.00 0.00 0.00 1.75
7174 7424 1.123928 ACGAGCCTGGGGAAGAATAG 58.876 55.000 0.00 0.00 0.00 1.73
7175 7425 1.343075 ACGAGCCTGGGGAAGAATAGA 60.343 52.381 0.00 0.00 0.00 1.98
7176 7426 1.974236 CGAGCCTGGGGAAGAATAGAT 59.026 52.381 0.00 0.00 0.00 1.98
7177 7427 2.370189 CGAGCCTGGGGAAGAATAGATT 59.630 50.000 0.00 0.00 0.00 2.40
7178 7428 3.749226 GAGCCTGGGGAAGAATAGATTG 58.251 50.000 0.00 0.00 0.00 2.67
7179 7429 2.158549 AGCCTGGGGAAGAATAGATTGC 60.159 50.000 0.00 0.00 0.00 3.56
7180 7430 2.423373 GCCTGGGGAAGAATAGATTGCA 60.423 50.000 0.00 0.00 0.00 4.08
7181 7431 3.217626 CCTGGGGAAGAATAGATTGCAC 58.782 50.000 0.00 0.00 0.00 4.57
7182 7432 3.117738 CCTGGGGAAGAATAGATTGCACT 60.118 47.826 0.00 0.00 0.00 4.40
7183 7433 4.530875 CTGGGGAAGAATAGATTGCACTT 58.469 43.478 0.00 0.00 0.00 3.16
7184 7434 4.272489 TGGGGAAGAATAGATTGCACTTG 58.728 43.478 0.00 0.00 0.00 3.16
7185 7435 4.263905 TGGGGAAGAATAGATTGCACTTGT 60.264 41.667 0.00 0.00 0.00 3.16
7186 7436 4.096984 GGGGAAGAATAGATTGCACTTGTG 59.903 45.833 0.00 0.00 0.00 3.33
7187 7437 4.702131 GGGAAGAATAGATTGCACTTGTGT 59.298 41.667 2.61 0.00 0.00 3.72
7188 7438 5.392380 GGGAAGAATAGATTGCACTTGTGTG 60.392 44.000 2.61 0.00 46.37 3.82
7189 7439 5.412594 GGAAGAATAGATTGCACTTGTGTGA 59.587 40.000 2.61 0.00 46.55 3.58
7190 7440 5.869753 AGAATAGATTGCACTTGTGTGAC 57.130 39.130 2.61 0.00 46.55 3.67
7191 7441 4.389992 AGAATAGATTGCACTTGTGTGACG 59.610 41.667 2.61 0.00 46.55 4.35
7192 7442 0.588252 AGATTGCACTTGTGTGACGC 59.412 50.000 2.61 0.00 46.55 5.19
7193 7443 0.588252 GATTGCACTTGTGTGACGCT 59.412 50.000 0.00 0.00 46.55 5.07
7194 7444 1.798223 GATTGCACTTGTGTGACGCTA 59.202 47.619 0.00 0.00 46.55 4.26
7195 7445 0.934496 TTGCACTTGTGTGACGCTAC 59.066 50.000 0.00 0.00 46.55 3.58
7196 7446 0.104120 TGCACTTGTGTGACGCTACT 59.896 50.000 0.00 0.00 46.55 2.57
7197 7447 0.784778 GCACTTGTGTGACGCTACTC 59.215 55.000 0.00 0.00 46.55 2.59
7198 7448 1.603172 GCACTTGTGTGACGCTACTCT 60.603 52.381 0.00 0.00 46.55 3.24
7199 7449 2.054363 CACTTGTGTGACGCTACTCTG 58.946 52.381 0.00 0.00 46.55 3.35
7200 7450 1.063806 CTTGTGTGACGCTACTCTGC 58.936 55.000 0.00 0.00 0.00 4.26
7201 7451 0.673985 TTGTGTGACGCTACTCTGCT 59.326 50.000 0.00 0.00 0.00 4.24
7202 7452 1.530323 TGTGTGACGCTACTCTGCTA 58.470 50.000 0.00 0.00 0.00 3.49
7203 7453 1.468914 TGTGTGACGCTACTCTGCTAG 59.531 52.381 0.00 0.00 0.00 3.42
7204 7454 1.738350 GTGTGACGCTACTCTGCTAGA 59.262 52.381 0.00 0.00 0.00 2.43
7205 7455 2.161808 GTGTGACGCTACTCTGCTAGAA 59.838 50.000 0.00 0.00 0.00 2.10
7206 7456 2.817844 TGTGACGCTACTCTGCTAGAAA 59.182 45.455 0.00 0.00 0.00 2.52
7207 7457 3.119814 TGTGACGCTACTCTGCTAGAAAG 60.120 47.826 0.00 0.00 0.00 2.62
7208 7458 3.127203 GTGACGCTACTCTGCTAGAAAGA 59.873 47.826 0.00 0.00 0.00 2.52
7209 7459 3.948473 TGACGCTACTCTGCTAGAAAGAT 59.052 43.478 0.00 0.00 0.00 2.40
7210 7460 4.399618 TGACGCTACTCTGCTAGAAAGATT 59.600 41.667 0.00 0.00 0.00 2.40
7211 7461 4.927422 ACGCTACTCTGCTAGAAAGATTC 58.073 43.478 0.00 0.00 0.00 2.52
7212 7462 4.399618 ACGCTACTCTGCTAGAAAGATTCA 59.600 41.667 0.00 0.00 0.00 2.57
7213 7463 5.105716 ACGCTACTCTGCTAGAAAGATTCAA 60.106 40.000 0.00 0.00 0.00 2.69
7214 7464 5.807520 CGCTACTCTGCTAGAAAGATTCAAA 59.192 40.000 0.00 0.00 0.00 2.69
7215 7465 6.019961 CGCTACTCTGCTAGAAAGATTCAAAG 60.020 42.308 0.00 0.00 0.00 2.77
7216 7466 6.816140 GCTACTCTGCTAGAAAGATTCAAAGT 59.184 38.462 0.00 0.00 0.00 2.66
7217 7467 7.010091 GCTACTCTGCTAGAAAGATTCAAAGTC 59.990 40.741 0.00 0.00 0.00 3.01
7218 7468 5.866633 ACTCTGCTAGAAAGATTCAAAGTCG 59.133 40.000 0.00 0.00 0.00 4.18
7219 7469 6.025749 TCTGCTAGAAAGATTCAAAGTCGA 57.974 37.500 0.00 0.00 0.00 4.20
7220 7470 6.096036 TCTGCTAGAAAGATTCAAAGTCGAG 58.904 40.000 0.00 0.00 0.00 4.04
7221 7471 4.627467 TGCTAGAAAGATTCAAAGTCGAGC 59.373 41.667 0.00 0.00 37.44 5.03
7222 7472 4.627467 GCTAGAAAGATTCAAAGTCGAGCA 59.373 41.667 0.00 0.00 37.06 4.26
7223 7473 5.293079 GCTAGAAAGATTCAAAGTCGAGCAT 59.707 40.000 0.00 0.00 37.06 3.79
7224 7474 5.793026 AGAAAGATTCAAAGTCGAGCATC 57.207 39.130 0.00 0.00 0.00 3.91
7225 7475 5.486526 AGAAAGATTCAAAGTCGAGCATCT 58.513 37.500 0.00 0.00 0.00 2.90
7226 7476 5.936956 AGAAAGATTCAAAGTCGAGCATCTT 59.063 36.000 0.00 0.00 33.37 2.40
7227 7477 5.793026 AAGATTCAAAGTCGAGCATCTTC 57.207 39.130 0.00 0.00 0.00 2.87
7228 7478 4.825422 AGATTCAAAGTCGAGCATCTTCA 58.175 39.130 0.00 0.00 0.00 3.02
7229 7479 4.869297 AGATTCAAAGTCGAGCATCTTCAG 59.131 41.667 0.00 0.00 0.00 3.02
7230 7480 3.942130 TCAAAGTCGAGCATCTTCAGA 57.058 42.857 0.00 0.00 0.00 3.27
7231 7481 4.257267 TCAAAGTCGAGCATCTTCAGAA 57.743 40.909 0.00 0.00 0.00 3.02
7232 7482 3.990469 TCAAAGTCGAGCATCTTCAGAAC 59.010 43.478 0.00 0.00 0.00 3.01
7233 7483 3.667497 AAGTCGAGCATCTTCAGAACA 57.333 42.857 0.00 0.00 0.00 3.18
7234 7484 3.883830 AGTCGAGCATCTTCAGAACAT 57.116 42.857 0.00 0.00 0.00 2.71
7235 7485 4.991153 AGTCGAGCATCTTCAGAACATA 57.009 40.909 0.00 0.00 0.00 2.29
7236 7486 5.330455 AGTCGAGCATCTTCAGAACATAA 57.670 39.130 0.00 0.00 0.00 1.90
7237 7487 5.724328 AGTCGAGCATCTTCAGAACATAAA 58.276 37.500 0.00 0.00 0.00 1.40
7238 7488 6.344500 AGTCGAGCATCTTCAGAACATAAAT 58.656 36.000 0.00 0.00 0.00 1.40
7239 7489 7.492524 AGTCGAGCATCTTCAGAACATAAATA 58.507 34.615 0.00 0.00 0.00 1.40
7240 7490 7.436673 AGTCGAGCATCTTCAGAACATAAATAC 59.563 37.037 0.00 0.00 0.00 1.89
7241 7491 7.436673 GTCGAGCATCTTCAGAACATAAATACT 59.563 37.037 0.00 0.00 0.00 2.12
7242 7492 7.649705 TCGAGCATCTTCAGAACATAAATACTC 59.350 37.037 0.00 0.00 0.00 2.59
7243 7493 7.095857 CGAGCATCTTCAGAACATAAATACTCC 60.096 40.741 0.00 0.00 0.00 3.85
7244 7494 6.995091 AGCATCTTCAGAACATAAATACTCCC 59.005 38.462 0.00 0.00 0.00 4.30
7245 7495 6.995091 GCATCTTCAGAACATAAATACTCCCT 59.005 38.462 0.00 0.00 0.00 4.20
7246 7496 7.500559 GCATCTTCAGAACATAAATACTCCCTT 59.499 37.037 0.00 0.00 0.00 3.95
7249 7499 9.268282 TCTTCAGAACATAAATACTCCCTTACT 57.732 33.333 0.00 0.00 0.00 2.24
7262 7512 9.939424 AATACTCCCTTACTAAAGTAGTGATCT 57.061 33.333 0.00 0.00 39.81 2.75
7265 7515 9.765295 ACTCCCTTACTAAAGTAGTGATCTAAA 57.235 33.333 0.00 0.00 39.81 1.85
7267 7517 8.680903 TCCCTTACTAAAGTAGTGATCTAAACG 58.319 37.037 0.00 0.00 39.81 3.60
7268 7518 7.434602 CCCTTACTAAAGTAGTGATCTAAACGC 59.565 40.741 0.00 0.00 39.81 4.84
7269 7519 8.189460 CCTTACTAAAGTAGTGATCTAAACGCT 58.811 37.037 0.00 0.00 39.81 5.07
7270 7520 9.224058 CTTACTAAAGTAGTGATCTAAACGCTC 57.776 37.037 0.00 0.00 39.81 5.03
7271 7521 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
7272 7522 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
7273 7523 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
7274 7524 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
7279 7529 9.771915 GTAGTGATCTAAACGCTCTTATATACC 57.228 37.037 0.00 0.00 0.00 2.73
7280 7530 8.638629 AGTGATCTAAACGCTCTTATATACCT 57.361 34.615 0.00 0.00 0.00 3.08
7281 7531 8.732531 AGTGATCTAAACGCTCTTATATACCTC 58.267 37.037 0.00 0.00 0.00 3.85
7282 7532 7.969508 GTGATCTAAACGCTCTTATATACCTCC 59.030 40.741 0.00 0.00 0.00 4.30
7283 7533 7.889073 TGATCTAAACGCTCTTATATACCTCCT 59.111 37.037 0.00 0.00 0.00 3.69
7284 7534 7.684937 TCTAAACGCTCTTATATACCTCCTC 57.315 40.000 0.00 0.00 0.00 3.71
7285 7535 7.460071 TCTAAACGCTCTTATATACCTCCTCT 58.540 38.462 0.00 0.00 0.00 3.69
7286 7536 5.968528 AACGCTCTTATATACCTCCTCTG 57.031 43.478 0.00 0.00 0.00 3.35
7287 7537 4.988029 ACGCTCTTATATACCTCCTCTGT 58.012 43.478 0.00 0.00 0.00 3.41
7288 7538 6.124316 ACGCTCTTATATACCTCCTCTGTA 57.876 41.667 0.00 0.00 0.00 2.74
7289 7539 6.540995 ACGCTCTTATATACCTCCTCTGTAA 58.459 40.000 0.00 0.00 0.00 2.41
7290 7540 7.002879 ACGCTCTTATATACCTCCTCTGTAAA 58.997 38.462 0.00 0.00 0.00 2.01
7291 7541 7.040548 ACGCTCTTATATACCTCCTCTGTAAAC 60.041 40.741 0.00 0.00 0.00 2.01
7292 7542 7.175293 CGCTCTTATATACCTCCTCTGTAAACT 59.825 40.741 0.00 0.00 0.00 2.66
7293 7543 9.517868 GCTCTTATATACCTCCTCTGTAAACTA 57.482 37.037 0.00 0.00 0.00 2.24
7303 7553 8.862085 ACCTCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
7304 7554 8.024285 CCTCCTCTGTAAACTAATATAAGAGCG 58.976 40.741 0.00 0.00 0.00 5.03
7305 7555 8.461249 TCCTCTGTAAACTAATATAAGAGCGT 57.539 34.615 0.00 0.00 0.00 5.07
7306 7556 8.910944 TCCTCTGTAAACTAATATAAGAGCGTT 58.089 33.333 0.00 0.00 0.00 4.84
7307 7557 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
7355 7605 8.658499 ACGCTTTTATATTAGTTTACAGAGGG 57.342 34.615 0.00 0.00 0.00 4.30
7356 7606 8.480501 ACGCTTTTATATTAGTTTACAGAGGGA 58.519 33.333 0.00 0.00 0.00 4.20
7357 7607 8.979574 CGCTTTTATATTAGTTTACAGAGGGAG 58.020 37.037 0.00 0.00 0.00 4.30
7358 7608 9.833917 GCTTTTATATTAGTTTACAGAGGGAGT 57.166 33.333 0.00 0.00 0.00 3.85
7391 7641 9.947189 TTATAGAGGGAGTAACAATTAGGAAGA 57.053 33.333 0.00 0.00 0.00 2.87
7392 7642 6.800072 AGAGGGAGTAACAATTAGGAAGAG 57.200 41.667 0.00 0.00 0.00 2.85
7393 7643 5.663556 AGAGGGAGTAACAATTAGGAAGAGG 59.336 44.000 0.00 0.00 0.00 3.69
7394 7644 5.600749 AGGGAGTAACAATTAGGAAGAGGA 58.399 41.667 0.00 0.00 0.00 3.71
7395 7645 6.213525 AGGGAGTAACAATTAGGAAGAGGAT 58.786 40.000 0.00 0.00 0.00 3.24
7396 7646 6.100424 AGGGAGTAACAATTAGGAAGAGGATG 59.900 42.308 0.00 0.00 0.00 3.51
7397 7647 5.760743 GGAGTAACAATTAGGAAGAGGATGC 59.239 44.000 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.815912 ACTACTACTCCCTCCGTTTTAAAATAA 58.184 33.333 3.52 0.00 0.00 1.40
1 2 8.366359 ACTACTACTCCCTCCGTTTTAAAATA 57.634 34.615 3.52 0.00 0.00 1.40
2 3 7.250032 ACTACTACTCCCTCCGTTTTAAAAT 57.750 36.000 3.52 0.00 0.00 1.82
3 4 6.670695 ACTACTACTCCCTCCGTTTTAAAA 57.329 37.500 0.00 0.00 0.00 1.52
4 5 7.961326 ATACTACTACTCCCTCCGTTTTAAA 57.039 36.000 0.00 0.00 0.00 1.52
5 6 8.052748 TGTATACTACTACTCCCTCCGTTTTAA 58.947 37.037 4.17 0.00 0.00 1.52
6 7 7.573710 TGTATACTACTACTCCCTCCGTTTTA 58.426 38.462 4.17 0.00 0.00 1.52
7 8 6.426587 TGTATACTACTACTCCCTCCGTTTT 58.573 40.000 4.17 0.00 0.00 2.43
8 9 6.006275 TGTATACTACTACTCCCTCCGTTT 57.994 41.667 4.17 0.00 0.00 3.60
9 10 5.636903 TGTATACTACTACTCCCTCCGTT 57.363 43.478 4.17 0.00 0.00 4.44
10 11 5.636903 TTGTATACTACTACTCCCTCCGT 57.363 43.478 4.17 0.00 0.00 4.69
11 12 8.804912 ATAATTGTATACTACTACTCCCTCCG 57.195 38.462 4.17 0.00 0.00 4.63
25 26 7.278629 CCTTCGCGTGTTGTATAATTGTATAC 58.721 38.462 5.77 0.00 41.71 1.47
44 45 0.654472 CGCATATTGTTCGCCTTCGC 60.654 55.000 0.00 0.00 35.26 4.70
52 53 0.102300 GTTGGGGCCGCATATTGTTC 59.898 55.000 24.75 4.92 0.00 3.18
139 140 4.740922 CCAGTTGGCCATGTAGCA 57.259 55.556 6.09 0.00 0.00 3.49
362 366 5.559799 GCAGTGTTTTCTAGCTCTGTCTTTG 60.560 44.000 0.00 0.00 0.00 2.77
379 383 1.701847 AGAGAACAGATGGGCAGTGTT 59.298 47.619 0.00 0.00 37.12 3.32
389 393 5.872070 GCTAACAAACAGCTAGAGAACAGAT 59.128 40.000 0.00 0.00 36.07 2.90
424 428 1.582680 GCCTTGTTAATTCGCGCGG 60.583 57.895 31.69 11.75 0.00 6.46
456 460 3.356639 GACGCCACGAGGAGCATCA 62.357 63.158 1.86 0.00 38.42 3.07
491 495 1.833630 CTCAATCCAGGTAGGCAGACA 59.166 52.381 0.00 0.00 37.29 3.41
507 511 3.074369 TCGCCCTCGGATGCTCAA 61.074 61.111 0.00 0.00 36.13 3.02
619 633 0.248215 CCACGAATTTGATCTGCGGC 60.248 55.000 0.00 0.00 0.00 6.53
652 666 0.319813 TGCTCATGTGTCCGTGACTG 60.320 55.000 0.00 0.00 33.12 3.51
743 768 3.053896 CCTTCCCGTTCCCGCAAC 61.054 66.667 0.00 0.00 0.00 4.17
893 918 2.603473 CACCTGACGACCCTGGGA 60.603 66.667 22.23 0.00 0.00 4.37
1009 1034 1.285280 CCTACCATTCCTGTCACCCA 58.715 55.000 0.00 0.00 0.00 4.51
1139 1165 0.618458 TTGGAGTTCGGGGGAGAATG 59.382 55.000 0.00 0.00 32.25 2.67
1140 1166 1.368374 TTTGGAGTTCGGGGGAGAAT 58.632 50.000 0.00 0.00 32.25 2.40
1141 1167 1.142060 TTTTGGAGTTCGGGGGAGAA 58.858 50.000 0.00 0.00 0.00 2.87
1142 1168 0.399075 GTTTTGGAGTTCGGGGGAGA 59.601 55.000 0.00 0.00 0.00 3.71
1143 1169 0.953960 CGTTTTGGAGTTCGGGGGAG 60.954 60.000 0.00 0.00 0.00 4.30
1246 1276 1.069823 GACCTCGACATCATGGCTGAT 59.930 52.381 0.00 0.00 43.02 2.90
1812 1842 1.639298 GGCAGATGCACCGTTCTCAC 61.639 60.000 7.19 0.00 44.36 3.51
2464 2494 0.534203 TATCATTTCCCTTCCCGCGC 60.534 55.000 0.00 0.00 0.00 6.86
2467 2497 4.718961 ACTCAATATCATTTCCCTTCCCG 58.281 43.478 0.00 0.00 0.00 5.14
2479 2509 2.705658 AGCCCGAATGGACTCAATATCA 59.294 45.455 0.00 0.00 37.49 2.15
2614 2644 1.008424 CACGACACACTCAGCGACT 60.008 57.895 0.00 0.00 0.00 4.18
2686 2716 1.115930 AGCTAGGTATGCCCTGTCGG 61.116 60.000 0.00 0.00 45.81 4.79
3354 3384 6.868864 TCTGAATAAAGTACAGACTTCACTGC 59.131 38.462 0.00 0.00 45.50 4.40
3381 3411 8.937207 TTGACCTAGACTCCTATTCCTATTAC 57.063 38.462 0.00 0.00 0.00 1.89
3418 3448 2.565841 AGCAGAAAACACTGACACCTC 58.434 47.619 0.00 0.00 39.94 3.85
3423 3453 3.494626 TCGATGAAGCAGAAAACACTGAC 59.505 43.478 0.00 0.00 39.94 3.51
3571 3609 4.263462 ACTGCATTATTCTCCCACTTGACA 60.263 41.667 0.00 0.00 0.00 3.58
3589 3627 0.521291 GTATTTTGCCGAGCACTGCA 59.479 50.000 3.30 0.00 38.71 4.41
3600 3638 0.465642 CCGAGGGAGGGGTATTTTGC 60.466 60.000 0.00 0.00 0.00 3.68
3667 3705 1.026718 GCAGCCTTAGCCAATCGTGT 61.027 55.000 0.00 0.00 41.25 4.49
3687 3725 3.748863 CTACGGAGCAGCAGAATGT 57.251 52.632 0.00 0.00 39.31 2.71
3777 3815 1.268352 TGAAAGCGCCGCAAAATACTT 59.732 42.857 13.36 0.00 0.00 2.24
3833 3872 1.361668 CCCTCGTGCGACAATTGAGG 61.362 60.000 13.59 6.28 44.65 3.86
3837 3876 0.892755 TACTCCCTCGTGCGACAATT 59.107 50.000 0.00 0.00 0.00 2.32
3838 3877 0.172803 GTACTCCCTCGTGCGACAAT 59.827 55.000 0.00 0.00 0.00 2.71
3840 3879 0.892358 AAGTACTCCCTCGTGCGACA 60.892 55.000 0.00 0.00 0.00 4.35
3841 3880 0.179169 GAAGTACTCCCTCGTGCGAC 60.179 60.000 0.00 0.00 0.00 5.19
3843 3882 0.456312 GTGAAGTACTCCCTCGTGCG 60.456 60.000 0.00 0.00 0.00 5.34
3846 3885 2.289592 ACAGTGAAGTACTCCCTCGT 57.710 50.000 0.00 0.00 37.60 4.18
3847 3886 4.398358 TCATTACAGTGAAGTACTCCCTCG 59.602 45.833 0.00 0.00 37.60 4.63
3889 3961 9.708222 CTGCTACATGAGTTTAATGAACATAAC 57.292 33.333 0.00 0.00 40.84 1.89
4006 4103 2.022625 AGTGATCTCCATTCTCCCCAGA 60.023 50.000 0.00 0.00 0.00 3.86
4084 4182 5.772393 AGTCCACCTACATATGGAAACAA 57.228 39.130 7.80 0.00 46.53 2.83
4106 4205 5.178096 TGGTTTGCCATTCTTCATCTCTA 57.822 39.130 0.00 0.00 40.46 2.43
4364 4463 2.871096 AATGGCGAACCTGAGGTTTA 57.129 45.000 19.33 6.20 46.95 2.01
4480 4695 3.858877 GCAGAGCAAGTCATAGGGTATCG 60.859 52.174 0.00 0.00 0.00 2.92
4593 4808 6.464465 GGGAGCACACCATATTACTAATCACT 60.464 42.308 0.00 0.00 0.00 3.41
4602 4817 3.384168 ACAGAGGGAGCACACCATATTA 58.616 45.455 0.00 0.00 0.00 0.98
4604 4819 1.765314 GACAGAGGGAGCACACCATAT 59.235 52.381 0.00 0.00 0.00 1.78
4621 4836 0.185416 TGGCCTTTTAAACCCGGACA 59.815 50.000 0.73 2.55 30.53 4.02
4625 4840 0.601057 CCACTGGCCTTTTAAACCCG 59.399 55.000 3.32 0.00 0.00 5.28
4650 4865 1.967319 AGAATTACGGGCATGCGATT 58.033 45.000 12.44 6.59 0.00 3.34
4726 4941 6.154192 TGGCTAATTAATTCACCAAATCAGCA 59.846 34.615 16.07 2.50 0.00 4.41
4734 4949 5.684704 CTCCTCTGGCTAATTAATTCACCA 58.315 41.667 16.97 16.97 0.00 4.17
4762 4977 1.028330 CCCTCACGCTTGCATGTGAT 61.028 55.000 18.93 1.91 43.59 3.06
4784 4999 4.023792 CGATTAAATTCTGCATGCAGCCTA 60.024 41.667 37.48 25.87 44.83 3.93
4806 5021 5.848207 CATCAATTATGCAAACGTAACCG 57.152 39.130 0.00 0.00 40.83 4.44
4819 5034 5.409211 TGCATTTGTCGTTGCATCAATTAT 58.591 33.333 0.00 0.00 43.54 1.28
4857 5072 2.706190 CCAACGGGATAGAGGAAGGAAT 59.294 50.000 0.00 0.00 35.59 3.01
4874 5091 3.964875 CTGGCCACGTGCACCAAC 61.965 66.667 23.64 6.29 43.89 3.77
4883 5100 2.126228 CTTGCAATGCTGGCCACG 60.126 61.111 0.00 0.00 0.00 4.94
4913 5130 0.036765 TCGGCGCCAGTTACAGAAAT 60.037 50.000 28.98 0.00 0.00 2.17
4927 5144 2.598192 CCAATGCAAAATTAACTCGGCG 59.402 45.455 0.00 0.00 0.00 6.46
4955 5172 1.007387 GTTGGCCAAAACGCTGAGG 60.007 57.895 22.47 0.00 0.00 3.86
4985 5202 0.824759 ACTACTTCATCCGTCTGGGC 59.175 55.000 0.00 0.00 35.24 5.36
5070 5287 8.250332 TGAAAGGCATTCACAATAGGATAAAAC 58.750 33.333 0.22 0.00 43.08 2.43
5076 5293 4.922206 ACTGAAAGGCATTCACAATAGGA 58.078 39.130 0.22 0.00 43.08 2.94
5155 5372 8.602472 ACCAAGGCCACATAAATAGAATAAAA 57.398 30.769 5.01 0.00 0.00 1.52
5179 5396 9.765795 AGTATTAAGTAGATATGGTGAAGCAAC 57.234 33.333 0.00 0.00 0.00 4.17
5208 5425 8.254508 ACAGTTTATTTTGTTCAAAGCTGGTTA 58.745 29.630 0.00 0.00 0.00 2.85
5209 5426 7.102993 ACAGTTTATTTTGTTCAAAGCTGGTT 58.897 30.769 0.00 0.00 0.00 3.67
5210 5427 6.639563 ACAGTTTATTTTGTTCAAAGCTGGT 58.360 32.000 0.00 0.00 0.00 4.00
5219 5436 9.797556 ACTAAACAAGGACAGTTTATTTTGTTC 57.202 29.630 0.00 0.00 39.78 3.18
5247 5464 5.928264 GCACTGCATATGACATACTCATGTA 59.072 40.000 6.97 0.00 45.58 2.29
5248 5465 5.685599 TGCACTGCATATGACATACTCATGT 60.686 40.000 6.97 0.00 40.04 3.21
5249 5466 4.753107 TGCACTGCATATGACATACTCATG 59.247 41.667 6.97 0.00 35.31 3.07
5250 5467 4.964593 TGCACTGCATATGACATACTCAT 58.035 39.130 6.97 0.00 37.21 2.90
5251 5468 4.405116 TGCACTGCATATGACATACTCA 57.595 40.909 6.97 0.00 31.71 3.41
5395 5620 1.135859 CAGCGGTGCAAAGATCAGAAC 60.136 52.381 0.00 0.00 0.00 3.01
5411 5636 4.438797 CGAATTAATGGAAATTCAGCAGCG 59.561 41.667 9.31 0.00 43.18 5.18
5435 5660 5.163561 CCTGCAGTACAAAGAGAAAACCAAA 60.164 40.000 13.81 0.00 0.00 3.28
5442 5667 2.438021 ACACCCTGCAGTACAAAGAGAA 59.562 45.455 13.81 0.00 0.00 2.87
5467 5692 7.943447 AGTATCTTCTCGGCTATAAGACCTTTA 59.057 37.037 0.00 0.00 32.38 1.85
5482 5707 9.534565 TCCTTCATTGATAAAAGTATCTTCTCG 57.465 33.333 0.00 0.00 37.58 4.04
5495 5720 7.230747 TGTTGACCTTTCTCCTTCATTGATAA 58.769 34.615 0.00 0.00 0.00 1.75
5496 5721 6.778821 TGTTGACCTTTCTCCTTCATTGATA 58.221 36.000 0.00 0.00 0.00 2.15
5557 5782 9.970395 GCAATATTTTCAAACATATCCTCATCA 57.030 29.630 0.00 0.00 0.00 3.07
5671 5896 6.996282 TGACTACTTCATATGTATCGTCCAGA 59.004 38.462 1.90 0.00 0.00 3.86
5779 6004 9.671279 TGTATTTGTTCATCACTGATGTCTAAT 57.329 29.630 16.96 18.10 40.55 1.73
5832 6057 2.680339 GCAGATTCAGTTCCAGGCTAAC 59.320 50.000 0.00 0.00 0.00 2.34
5901 6126 3.808218 TTTGCCCACTGCTCCACCC 62.808 63.158 0.00 0.00 42.00 4.61
6024 6250 6.644592 CCTTGCAGCTTCAGACTATATAACTC 59.355 42.308 0.00 0.00 0.00 3.01
6091 6317 4.244862 CCATTGAAATGCAGTAACCAACC 58.755 43.478 0.00 0.00 35.08 3.77
6155 6381 2.227388 CACAAGAGAAACATGGGAGCAC 59.773 50.000 0.00 0.00 0.00 4.40
6202 6428 2.156917 GTCCTTTCCCCAGGTTTAACG 58.843 52.381 0.00 0.00 35.15 3.18
6213 6439 1.338020 CTGCAACAGTTGTCCTTTCCC 59.662 52.381 14.88 0.00 0.00 3.97
6214 6440 1.269257 GCTGCAACAGTTGTCCTTTCC 60.269 52.381 14.88 0.00 33.43 3.13
6352 6581 5.746065 GCCAGATATAAGGGTGCACATAACT 60.746 44.000 20.43 8.82 0.00 2.24
6434 6665 2.742774 TCGGTGATCATCAGCAATACG 58.257 47.619 16.91 0.29 44.51 3.06
6466 6697 3.376540 GCTCCTCTCAAACACTATAGCG 58.623 50.000 0.00 0.00 0.00 4.26
6474 6705 0.250467 GCAGTGGCTCCTCTCAAACA 60.250 55.000 0.00 0.00 36.96 2.83
6530 6772 2.495270 AGCATGCTATAGCGCTGATAGT 59.505 45.455 21.21 5.82 45.83 2.12
6584 6834 6.038997 AGTTTCAGCCGTCTAAGAAATAGT 57.961 37.500 0.00 0.00 33.18 2.12
6706 6956 3.242316 GCAAAAACTAATACCGAGCGAGG 60.242 47.826 0.00 0.00 37.30 4.63
6744 6994 1.742880 GCTGTGCTGCCTCATTCGA 60.743 57.895 0.00 0.00 0.00 3.71
6776 7026 4.934001 TGTGCTGCACTTGAAAATGAAAAA 59.066 33.333 30.43 5.03 35.11 1.94
6801 7051 2.614057 GGTTTATGTCAATCTCCCTGCG 59.386 50.000 0.00 0.00 0.00 5.18
6802 7052 3.891049 AGGTTTATGTCAATCTCCCTGC 58.109 45.455 0.00 0.00 0.00 4.85
6803 7053 5.050490 CGTAGGTTTATGTCAATCTCCCTG 58.950 45.833 0.00 0.00 0.00 4.45
6804 7054 5.277857 CGTAGGTTTATGTCAATCTCCCT 57.722 43.478 0.00 0.00 0.00 4.20
6853 7103 9.319143 GTCACTTAGATGTGCAATAACTAGAAT 57.681 33.333 0.00 0.00 37.81 2.40
6854 7104 8.531982 AGTCACTTAGATGTGCAATAACTAGAA 58.468 33.333 0.00 0.00 37.81 2.10
6855 7105 8.067751 AGTCACTTAGATGTGCAATAACTAGA 57.932 34.615 0.00 0.00 37.81 2.43
6856 7106 7.976175 TGAGTCACTTAGATGTGCAATAACTAG 59.024 37.037 0.00 0.00 37.81 2.57
6857 7107 7.836842 TGAGTCACTTAGATGTGCAATAACTA 58.163 34.615 0.00 0.00 37.81 2.24
6858 7108 6.701340 TGAGTCACTTAGATGTGCAATAACT 58.299 36.000 0.00 0.00 37.81 2.24
6859 7109 6.968131 TGAGTCACTTAGATGTGCAATAAC 57.032 37.500 0.00 0.00 37.81 1.89
6860 7110 8.565896 AATTGAGTCACTTAGATGTGCAATAA 57.434 30.769 0.00 0.00 37.81 1.40
6861 7111 9.665719 TTAATTGAGTCACTTAGATGTGCAATA 57.334 29.630 0.00 0.00 37.81 1.90
6862 7112 8.565896 TTAATTGAGTCACTTAGATGTGCAAT 57.434 30.769 0.00 0.00 37.81 3.56
6863 7113 7.361201 GCTTAATTGAGTCACTTAGATGTGCAA 60.361 37.037 0.00 0.00 37.81 4.08
6864 7114 6.092670 GCTTAATTGAGTCACTTAGATGTGCA 59.907 38.462 0.00 0.00 37.81 4.57
6865 7115 6.092670 TGCTTAATTGAGTCACTTAGATGTGC 59.907 38.462 0.00 0.96 37.81 4.57
6866 7116 7.601073 TGCTTAATTGAGTCACTTAGATGTG 57.399 36.000 0.00 0.00 39.15 3.21
6867 7117 8.043113 TGATGCTTAATTGAGTCACTTAGATGT 58.957 33.333 0.00 0.00 0.00 3.06
6868 7118 8.429493 TGATGCTTAATTGAGTCACTTAGATG 57.571 34.615 0.00 0.00 0.00 2.90
6869 7119 9.453572 TTTGATGCTTAATTGAGTCACTTAGAT 57.546 29.630 0.00 0.00 0.00 1.98
6870 7120 8.846943 TTTGATGCTTAATTGAGTCACTTAGA 57.153 30.769 0.00 0.00 0.00 2.10
6871 7121 9.552114 CTTTTGATGCTTAATTGAGTCACTTAG 57.448 33.333 0.00 0.00 0.00 2.18
6872 7122 8.514594 CCTTTTGATGCTTAATTGAGTCACTTA 58.485 33.333 0.00 0.00 0.00 2.24
6873 7123 7.231317 TCCTTTTGATGCTTAATTGAGTCACTT 59.769 33.333 0.00 0.00 0.00 3.16
6874 7124 6.716628 TCCTTTTGATGCTTAATTGAGTCACT 59.283 34.615 0.00 0.00 0.00 3.41
6875 7125 6.913170 TCCTTTTGATGCTTAATTGAGTCAC 58.087 36.000 0.00 0.00 0.00 3.67
6876 7126 7.523293 TTCCTTTTGATGCTTAATTGAGTCA 57.477 32.000 0.00 0.00 0.00 3.41
6877 7127 8.816640 TTTTCCTTTTGATGCTTAATTGAGTC 57.183 30.769 0.00 0.00 0.00 3.36
6878 7128 8.641541 TCTTTTCCTTTTGATGCTTAATTGAGT 58.358 29.630 0.00 0.00 0.00 3.41
6879 7129 9.480053 TTCTTTTCCTTTTGATGCTTAATTGAG 57.520 29.630 0.00 0.00 0.00 3.02
6880 7130 9.829507 TTTCTTTTCCTTTTGATGCTTAATTGA 57.170 25.926 0.00 0.00 0.00 2.57
6906 7156 7.292713 AGGTTCGTGTGGGTATTTTATTTTT 57.707 32.000 0.00 0.00 0.00 1.94
6907 7157 6.904463 AGGTTCGTGTGGGTATTTTATTTT 57.096 33.333 0.00 0.00 0.00 1.82
6908 7158 6.904463 AAGGTTCGTGTGGGTATTTTATTT 57.096 33.333 0.00 0.00 0.00 1.40
6909 7159 6.904463 AAAGGTTCGTGTGGGTATTTTATT 57.096 33.333 0.00 0.00 0.00 1.40
6910 7160 7.612633 ACATAAAGGTTCGTGTGGGTATTTTAT 59.387 33.333 0.00 0.00 0.00 1.40
6911 7161 6.941436 ACATAAAGGTTCGTGTGGGTATTTTA 59.059 34.615 0.00 0.00 0.00 1.52
6912 7162 5.771165 ACATAAAGGTTCGTGTGGGTATTTT 59.229 36.000 0.00 0.00 0.00 1.82
6913 7163 5.318630 ACATAAAGGTTCGTGTGGGTATTT 58.681 37.500 0.00 0.00 0.00 1.40
6914 7164 4.913784 ACATAAAGGTTCGTGTGGGTATT 58.086 39.130 0.00 0.00 0.00 1.89
6915 7165 4.563140 ACATAAAGGTTCGTGTGGGTAT 57.437 40.909 0.00 0.00 0.00 2.73
6916 7166 5.245751 TCTTACATAAAGGTTCGTGTGGGTA 59.754 40.000 0.00 0.00 35.75 3.69
6917 7167 2.943036 ACATAAAGGTTCGTGTGGGT 57.057 45.000 0.00 0.00 0.00 4.51
6918 7168 4.571919 TCTTACATAAAGGTTCGTGTGGG 58.428 43.478 0.00 0.00 35.75 4.61
6919 7169 5.872617 TGATCTTACATAAAGGTTCGTGTGG 59.127 40.000 0.00 0.00 35.75 4.17
6920 7170 6.961359 TGATCTTACATAAAGGTTCGTGTG 57.039 37.500 0.00 0.00 35.75 3.82
6921 7171 7.414098 GCATTGATCTTACATAAAGGTTCGTGT 60.414 37.037 0.00 0.00 35.75 4.49
6922 7172 6.907212 GCATTGATCTTACATAAAGGTTCGTG 59.093 38.462 0.00 0.00 35.75 4.35
6923 7173 6.038271 GGCATTGATCTTACATAAAGGTTCGT 59.962 38.462 0.00 0.00 35.75 3.85
6924 7174 6.038161 TGGCATTGATCTTACATAAAGGTTCG 59.962 38.462 0.00 0.00 35.75 3.95
6925 7175 7.333528 TGGCATTGATCTTACATAAAGGTTC 57.666 36.000 0.00 0.00 35.75 3.62
6926 7176 7.902920 ATGGCATTGATCTTACATAAAGGTT 57.097 32.000 0.00 0.00 35.75 3.50
6927 7177 9.017509 CATATGGCATTGATCTTACATAAAGGT 57.982 33.333 4.78 0.00 35.75 3.50
6928 7178 9.234827 TCATATGGCATTGATCTTACATAAAGG 57.765 33.333 4.78 0.00 35.75 3.11
6939 7189 9.894783 GCATATCTAAATCATATGGCATTGATC 57.105 33.333 18.76 0.00 35.53 2.92
6940 7190 9.416284 TGCATATCTAAATCATATGGCATTGAT 57.584 29.630 4.78 11.75 35.53 2.57
6941 7191 8.810990 TGCATATCTAAATCATATGGCATTGA 57.189 30.769 4.78 9.89 35.53 2.57
6945 7195 9.910267 AGTATTGCATATCTAAATCATATGGCA 57.090 29.630 2.13 0.00 35.53 4.92
6952 7202 9.737844 TGCCATAAGTATTGCATATCTAAATCA 57.262 29.630 0.00 0.00 30.49 2.57
6953 7203 9.994432 GTGCCATAAGTATTGCATATCTAAATC 57.006 33.333 0.92 0.00 36.83 2.17
6954 7204 9.519191 TGTGCCATAAGTATTGCATATCTAAAT 57.481 29.630 0.92 0.00 36.83 1.40
6955 7205 8.916628 TGTGCCATAAGTATTGCATATCTAAA 57.083 30.769 0.92 0.00 36.83 1.85
6956 7206 9.166173 GATGTGCCATAAGTATTGCATATCTAA 57.834 33.333 18.74 0.00 43.34 2.10
6957 7207 8.722480 GATGTGCCATAAGTATTGCATATCTA 57.278 34.615 18.74 1.53 43.34 1.98
6958 7208 7.621428 GATGTGCCATAAGTATTGCATATCT 57.379 36.000 18.74 0.00 43.34 1.98
6959 7209 7.621428 AGATGTGCCATAAGTATTGCATATC 57.379 36.000 18.53 18.53 45.14 1.63
6960 7210 8.542926 TCTAGATGTGCCATAAGTATTGCATAT 58.457 33.333 6.39 6.39 38.33 1.78
6961 7211 7.906327 TCTAGATGTGCCATAAGTATTGCATA 58.094 34.615 0.92 0.00 36.83 3.14
6962 7212 6.772605 TCTAGATGTGCCATAAGTATTGCAT 58.227 36.000 0.92 0.00 36.83 3.96
6963 7213 6.173427 TCTAGATGTGCCATAAGTATTGCA 57.827 37.500 0.00 0.00 32.69 4.08
6964 7214 7.069852 CATCTAGATGTGCCATAAGTATTGC 57.930 40.000 22.42 0.00 34.23 3.56
6979 7229 8.292448 ACAGTTTTGTTAAAGCACATCTAGATG 58.708 33.333 27.63 27.63 38.39 2.90
6980 7230 8.396272 ACAGTTTTGTTAAAGCACATCTAGAT 57.604 30.769 0.00 0.00 32.28 1.98
6981 7231 7.801716 ACAGTTTTGTTAAAGCACATCTAGA 57.198 32.000 0.00 0.00 32.28 2.43
6982 7232 9.944663 TTTACAGTTTTGTTAAAGCACATCTAG 57.055 29.630 0.00 0.00 38.76 2.43
6983 7233 9.724839 GTTTACAGTTTTGTTAAAGCACATCTA 57.275 29.630 0.00 0.00 38.76 1.98
6984 7234 7.704899 GGTTTACAGTTTTGTTAAAGCACATCT 59.295 33.333 0.00 0.00 38.76 2.90
6985 7235 7.704899 AGGTTTACAGTTTTGTTAAAGCACATC 59.295 33.333 0.00 0.00 38.76 3.06
6986 7236 7.552459 AGGTTTACAGTTTTGTTAAAGCACAT 58.448 30.769 0.00 0.00 38.76 3.21
6987 7237 6.926313 AGGTTTACAGTTTTGTTAAAGCACA 58.074 32.000 0.00 0.00 38.76 4.57
6988 7238 9.524106 AATAGGTTTACAGTTTTGTTAAAGCAC 57.476 29.630 0.00 0.00 38.76 4.40
6993 7243 9.733219 CGGAAAATAGGTTTACAGTTTTGTTAA 57.267 29.630 0.00 0.00 38.76 2.01
6994 7244 8.901793 ACGGAAAATAGGTTTACAGTTTTGTTA 58.098 29.630 0.00 0.00 38.76 2.41
6995 7245 7.774134 ACGGAAAATAGGTTTACAGTTTTGTT 58.226 30.769 0.00 0.00 38.76 2.83
6996 7246 7.337480 ACGGAAAATAGGTTTACAGTTTTGT 57.663 32.000 0.00 0.00 41.39 2.83
6997 7247 6.859508 GGACGGAAAATAGGTTTACAGTTTTG 59.140 38.462 0.00 0.00 29.40 2.44
6998 7248 6.546772 TGGACGGAAAATAGGTTTACAGTTTT 59.453 34.615 0.00 0.00 29.40 2.43
6999 7249 6.063404 TGGACGGAAAATAGGTTTACAGTTT 58.937 36.000 0.00 0.00 29.40 2.66
7000 7250 5.623169 TGGACGGAAAATAGGTTTACAGTT 58.377 37.500 0.00 0.00 29.40 3.16
7001 7251 5.231702 TGGACGGAAAATAGGTTTACAGT 57.768 39.130 0.00 0.00 29.40 3.55
7002 7252 5.878116 TGATGGACGGAAAATAGGTTTACAG 59.122 40.000 0.00 0.00 29.40 2.74
7003 7253 5.806818 TGATGGACGGAAAATAGGTTTACA 58.193 37.500 0.00 0.00 29.40 2.41
7004 7254 6.540914 TGATGATGGACGGAAAATAGGTTTAC 59.459 38.462 0.00 0.00 0.00 2.01
7005 7255 6.654959 TGATGATGGACGGAAAATAGGTTTA 58.345 36.000 0.00 0.00 0.00 2.01
7006 7256 5.505780 TGATGATGGACGGAAAATAGGTTT 58.494 37.500 0.00 0.00 0.00 3.27
7007 7257 5.110814 TGATGATGGACGGAAAATAGGTT 57.889 39.130 0.00 0.00 0.00 3.50
7008 7258 4.771114 TGATGATGGACGGAAAATAGGT 57.229 40.909 0.00 0.00 0.00 3.08
7009 7259 7.161404 TCTAATGATGATGGACGGAAAATAGG 58.839 38.462 0.00 0.00 0.00 2.57
7010 7260 8.499162 GTTCTAATGATGATGGACGGAAAATAG 58.501 37.037 0.00 0.00 0.00 1.73
7011 7261 8.210946 AGTTCTAATGATGATGGACGGAAAATA 58.789 33.333 0.00 0.00 0.00 1.40
7012 7262 7.056635 AGTTCTAATGATGATGGACGGAAAAT 58.943 34.615 0.00 0.00 0.00 1.82
7013 7263 6.414732 AGTTCTAATGATGATGGACGGAAAA 58.585 36.000 0.00 0.00 0.00 2.29
7014 7264 5.989477 AGTTCTAATGATGATGGACGGAAA 58.011 37.500 0.00 0.00 0.00 3.13
7015 7265 5.614324 AGTTCTAATGATGATGGACGGAA 57.386 39.130 0.00 0.00 0.00 4.30
7016 7266 5.359756 CAAGTTCTAATGATGATGGACGGA 58.640 41.667 0.00 0.00 0.00 4.69
7017 7267 4.512944 CCAAGTTCTAATGATGATGGACGG 59.487 45.833 0.00 0.00 0.00 4.79
7018 7268 5.359756 TCCAAGTTCTAATGATGATGGACG 58.640 41.667 0.00 0.00 31.12 4.79
7019 7269 7.500227 TCATTCCAAGTTCTAATGATGATGGAC 59.500 37.037 5.62 0.00 35.32 4.02
7020 7270 7.576403 TCATTCCAAGTTCTAATGATGATGGA 58.424 34.615 5.62 0.00 35.32 3.41
7021 7271 7.812690 TCATTCCAAGTTCTAATGATGATGG 57.187 36.000 5.62 0.00 35.32 3.51
7060 7310 6.888105 TCATCAGCCTTATGAGTTGACATAA 58.112 36.000 0.00 0.00 39.44 1.90
7061 7311 6.484364 TCATCAGCCTTATGAGTTGACATA 57.516 37.500 0.00 0.00 31.44 2.29
7062 7312 5.363562 TCATCAGCCTTATGAGTTGACAT 57.636 39.130 0.00 0.00 31.44 3.06
7063 7313 4.824479 TCATCAGCCTTATGAGTTGACA 57.176 40.909 0.00 0.00 31.44 3.58
7064 7314 6.989169 ACTTATCATCAGCCTTATGAGTTGAC 59.011 38.462 0.00 0.00 36.82 3.18
7065 7315 7.129457 ACTTATCATCAGCCTTATGAGTTGA 57.871 36.000 0.00 0.00 36.82 3.18
7066 7316 8.893219 TTACTTATCATCAGCCTTATGAGTTG 57.107 34.615 0.00 0.00 36.82 3.16
7067 7317 8.153550 CCTTACTTATCATCAGCCTTATGAGTT 58.846 37.037 0.00 0.00 36.82 3.01
7068 7318 7.291182 ACCTTACTTATCATCAGCCTTATGAGT 59.709 37.037 0.00 0.00 36.82 3.41
7069 7319 7.675062 ACCTTACTTATCATCAGCCTTATGAG 58.325 38.462 0.00 0.00 36.82 2.90
7070 7320 7.510685 AGACCTTACTTATCATCAGCCTTATGA 59.489 37.037 0.00 0.00 37.73 2.15
7071 7321 7.675062 AGACCTTACTTATCATCAGCCTTATG 58.325 38.462 0.00 0.00 0.00 1.90
7072 7322 7.038658 GGAGACCTTACTTATCATCAGCCTTAT 60.039 40.741 0.00 0.00 0.00 1.73
7073 7323 6.267928 GGAGACCTTACTTATCATCAGCCTTA 59.732 42.308 0.00 0.00 0.00 2.69
7074 7324 5.071115 GGAGACCTTACTTATCATCAGCCTT 59.929 44.000 0.00 0.00 0.00 4.35
7075 7325 4.591072 GGAGACCTTACTTATCATCAGCCT 59.409 45.833 0.00 0.00 0.00 4.58
7076 7326 4.591072 AGGAGACCTTACTTATCATCAGCC 59.409 45.833 0.00 0.00 0.00 4.85
7077 7327 5.799827 AGGAGACCTTACTTATCATCAGC 57.200 43.478 0.00 0.00 0.00 4.26
7078 7328 8.356657 CAACTAGGAGACCTTACTTATCATCAG 58.643 40.741 0.00 0.00 34.61 2.90
7079 7329 7.839705 ACAACTAGGAGACCTTACTTATCATCA 59.160 37.037 0.00 0.00 34.61 3.07
7080 7330 8.240267 ACAACTAGGAGACCTTACTTATCATC 57.760 38.462 0.00 0.00 34.61 2.92
7081 7331 9.884814 ATACAACTAGGAGACCTTACTTATCAT 57.115 33.333 0.00 0.00 34.61 2.45
7082 7332 9.710818 AATACAACTAGGAGACCTTACTTATCA 57.289 33.333 0.00 0.00 34.61 2.15
7086 7336 8.877195 TCAAAATACAACTAGGAGACCTTACTT 58.123 33.333 0.00 0.00 34.61 2.24
7087 7337 8.312564 GTCAAAATACAACTAGGAGACCTTACT 58.687 37.037 0.00 0.00 34.61 2.24
7088 7338 7.548427 GGTCAAAATACAACTAGGAGACCTTAC 59.452 40.741 0.00 0.00 39.79 2.34
7089 7339 7.578189 CGGTCAAAATACAACTAGGAGACCTTA 60.578 40.741 0.00 0.00 40.52 2.69
7090 7340 6.473758 GGTCAAAATACAACTAGGAGACCTT 58.526 40.000 0.00 0.00 39.79 3.50
7091 7341 5.337330 CGGTCAAAATACAACTAGGAGACCT 60.337 44.000 0.00 0.00 40.52 3.85
7092 7342 4.868734 CGGTCAAAATACAACTAGGAGACC 59.131 45.833 0.00 0.00 39.58 3.85
7093 7343 5.476614 ACGGTCAAAATACAACTAGGAGAC 58.523 41.667 0.00 0.00 0.00 3.36
7094 7344 5.733620 ACGGTCAAAATACAACTAGGAGA 57.266 39.130 0.00 0.00 0.00 3.71
7095 7345 5.350640 GGAACGGTCAAAATACAACTAGGAG 59.649 44.000 1.31 0.00 0.00 3.69
7096 7346 5.240121 GGAACGGTCAAAATACAACTAGGA 58.760 41.667 1.31 0.00 0.00 2.94
7097 7347 4.393990 GGGAACGGTCAAAATACAACTAGG 59.606 45.833 1.31 0.00 0.00 3.02
7098 7348 4.393990 GGGGAACGGTCAAAATACAACTAG 59.606 45.833 1.31 0.00 0.00 2.57
7099 7349 4.041938 AGGGGAACGGTCAAAATACAACTA 59.958 41.667 1.31 0.00 0.00 2.24
7100 7350 3.151554 GGGGAACGGTCAAAATACAACT 58.848 45.455 1.31 0.00 0.00 3.16
7101 7351 3.151554 AGGGGAACGGTCAAAATACAAC 58.848 45.455 1.31 0.00 0.00 3.32
7102 7352 3.512219 AGGGGAACGGTCAAAATACAA 57.488 42.857 1.31 0.00 0.00 2.41
7103 7353 4.637387 TTAGGGGAACGGTCAAAATACA 57.363 40.909 1.31 0.00 0.00 2.29
7104 7354 5.963176 TTTTAGGGGAACGGTCAAAATAC 57.037 39.130 1.31 0.00 0.00 1.89
7125 7375 8.710835 AATAAATCGGTGAAACACAACTTTTT 57.289 26.923 0.00 0.00 39.98 1.94
7126 7376 7.976734 TGAATAAATCGGTGAAACACAACTTTT 59.023 29.630 0.00 0.00 39.98 2.27
7127 7377 7.484975 TGAATAAATCGGTGAAACACAACTTT 58.515 30.769 0.00 0.00 39.98 2.66
7128 7378 7.033530 TGAATAAATCGGTGAAACACAACTT 57.966 32.000 0.00 0.00 39.98 2.66
7129 7379 6.627395 TGAATAAATCGGTGAAACACAACT 57.373 33.333 0.00 0.00 39.98 3.16
7130 7380 7.060633 GTGATGAATAAATCGGTGAAACACAAC 59.939 37.037 0.00 0.00 39.98 3.32
7131 7381 7.081349 GTGATGAATAAATCGGTGAAACACAA 58.919 34.615 0.00 0.00 39.98 3.33
7132 7382 6.607689 GTGATGAATAAATCGGTGAAACACA 58.392 36.000 0.00 0.00 39.98 3.72
7133 7383 5.732647 CGTGATGAATAAATCGGTGAAACAC 59.267 40.000 0.00 0.00 39.98 3.32
7134 7384 5.639931 TCGTGATGAATAAATCGGTGAAACA 59.360 36.000 0.00 0.00 39.98 2.83
7135 7385 6.102006 TCGTGATGAATAAATCGGTGAAAC 57.898 37.500 0.00 0.00 0.00 2.78
7136 7386 5.220586 GCTCGTGATGAATAAATCGGTGAAA 60.221 40.000 0.00 0.00 0.00 2.69
7137 7387 4.270084 GCTCGTGATGAATAAATCGGTGAA 59.730 41.667 0.00 0.00 0.00 3.18
7138 7388 3.802139 GCTCGTGATGAATAAATCGGTGA 59.198 43.478 0.00 0.00 0.00 4.02
7139 7389 3.059597 GGCTCGTGATGAATAAATCGGTG 60.060 47.826 0.00 0.00 0.00 4.94
7140 7390 3.131396 GGCTCGTGATGAATAAATCGGT 58.869 45.455 0.00 0.00 0.00 4.69
7141 7391 3.185188 CAGGCTCGTGATGAATAAATCGG 59.815 47.826 0.00 0.00 0.00 4.18
7142 7392 3.185188 CCAGGCTCGTGATGAATAAATCG 59.815 47.826 0.00 0.00 0.00 3.34
7143 7393 3.499918 CCCAGGCTCGTGATGAATAAATC 59.500 47.826 0.00 0.00 0.00 2.17
7144 7394 3.480470 CCCAGGCTCGTGATGAATAAAT 58.520 45.455 0.00 0.00 0.00 1.40
7145 7395 2.421388 CCCCAGGCTCGTGATGAATAAA 60.421 50.000 0.00 0.00 0.00 1.40
7146 7396 1.140852 CCCCAGGCTCGTGATGAATAA 59.859 52.381 0.00 0.00 0.00 1.40
7147 7397 0.758734 CCCCAGGCTCGTGATGAATA 59.241 55.000 0.00 0.00 0.00 1.75
7148 7398 0.982852 TCCCCAGGCTCGTGATGAAT 60.983 55.000 0.00 0.00 0.00 2.57
7149 7399 1.198094 TTCCCCAGGCTCGTGATGAA 61.198 55.000 0.00 0.00 0.00 2.57
7150 7400 1.612146 TTCCCCAGGCTCGTGATGA 60.612 57.895 0.00 0.00 0.00 2.92
7151 7401 1.153289 CTTCCCCAGGCTCGTGATG 60.153 63.158 0.00 0.00 0.00 3.07
7152 7402 0.909610 TTCTTCCCCAGGCTCGTGAT 60.910 55.000 0.00 0.00 0.00 3.06
7153 7403 0.909610 ATTCTTCCCCAGGCTCGTGA 60.910 55.000 0.00 0.00 0.00 4.35
7154 7404 0.830648 TATTCTTCCCCAGGCTCGTG 59.169 55.000 0.00 0.00 0.00 4.35
7155 7405 1.123928 CTATTCTTCCCCAGGCTCGT 58.876 55.000 0.00 0.00 0.00 4.18
7156 7406 1.414158 TCTATTCTTCCCCAGGCTCG 58.586 55.000 0.00 0.00 0.00 5.03
7157 7407 3.749226 CAATCTATTCTTCCCCAGGCTC 58.251 50.000 0.00 0.00 0.00 4.70
7158 7408 2.158549 GCAATCTATTCTTCCCCAGGCT 60.159 50.000 0.00 0.00 0.00 4.58
7159 7409 2.234143 GCAATCTATTCTTCCCCAGGC 58.766 52.381 0.00 0.00 0.00 4.85
7160 7410 3.117738 AGTGCAATCTATTCTTCCCCAGG 60.118 47.826 0.00 0.00 0.00 4.45
7161 7411 4.162040 AGTGCAATCTATTCTTCCCCAG 57.838 45.455 0.00 0.00 0.00 4.45
7162 7412 4.263905 ACAAGTGCAATCTATTCTTCCCCA 60.264 41.667 0.00 0.00 0.00 4.96
7163 7413 4.096984 CACAAGTGCAATCTATTCTTCCCC 59.903 45.833 0.00 0.00 0.00 4.81
7164 7414 4.702131 ACACAAGTGCAATCTATTCTTCCC 59.298 41.667 0.00 0.00 0.00 3.97
7165 7415 5.412594 TCACACAAGTGCAATCTATTCTTCC 59.587 40.000 0.00 0.00 45.49 3.46
7166 7416 6.310197 GTCACACAAGTGCAATCTATTCTTC 58.690 40.000 0.00 0.00 45.49 2.87
7167 7417 5.106948 CGTCACACAAGTGCAATCTATTCTT 60.107 40.000 0.00 0.00 45.49 2.52
7168 7418 4.389992 CGTCACACAAGTGCAATCTATTCT 59.610 41.667 0.00 0.00 45.49 2.40
7169 7419 4.641954 CGTCACACAAGTGCAATCTATTC 58.358 43.478 0.00 0.00 45.49 1.75
7170 7420 3.120199 GCGTCACACAAGTGCAATCTATT 60.120 43.478 0.00 0.00 45.49 1.73
7171 7421 2.416547 GCGTCACACAAGTGCAATCTAT 59.583 45.455 0.00 0.00 45.49 1.98
7172 7422 1.798223 GCGTCACACAAGTGCAATCTA 59.202 47.619 0.00 0.00 45.49 1.98
7173 7423 0.588252 GCGTCACACAAGTGCAATCT 59.412 50.000 0.00 0.00 45.49 2.40
7174 7424 0.588252 AGCGTCACACAAGTGCAATC 59.412 50.000 0.00 0.00 45.49 2.67
7175 7425 1.531149 GTAGCGTCACACAAGTGCAAT 59.469 47.619 0.00 0.00 45.49 3.56
7176 7426 0.934496 GTAGCGTCACACAAGTGCAA 59.066 50.000 0.00 0.00 45.49 4.08
7177 7427 0.104120 AGTAGCGTCACACAAGTGCA 59.896 50.000 0.00 0.00 45.49 4.57
7178 7428 0.784778 GAGTAGCGTCACACAAGTGC 59.215 55.000 0.00 0.00 45.49 4.40
7179 7429 5.939353 AGCAGAGTAGCGTCACACAAGTG 62.939 52.174 0.00 0.00 42.60 3.16
7180 7430 1.603172 GCAGAGTAGCGTCACACAAGT 60.603 52.381 0.00 0.00 0.00 3.16
7181 7431 1.063806 GCAGAGTAGCGTCACACAAG 58.936 55.000 0.00 0.00 0.00 3.16
7182 7432 0.673985 AGCAGAGTAGCGTCACACAA 59.326 50.000 0.00 0.00 40.15 3.33
7183 7433 1.468914 CTAGCAGAGTAGCGTCACACA 59.531 52.381 0.00 0.00 40.15 3.72
7184 7434 1.738350 TCTAGCAGAGTAGCGTCACAC 59.262 52.381 0.00 0.00 40.15 3.82
7185 7435 2.109425 TCTAGCAGAGTAGCGTCACA 57.891 50.000 0.00 0.00 40.15 3.58
7186 7436 3.127203 TCTTTCTAGCAGAGTAGCGTCAC 59.873 47.826 0.00 0.00 40.15 3.67
7187 7437 3.344515 TCTTTCTAGCAGAGTAGCGTCA 58.655 45.455 0.00 0.00 40.15 4.35
7188 7438 4.561735 ATCTTTCTAGCAGAGTAGCGTC 57.438 45.455 0.00 0.00 40.15 5.19
7189 7439 4.399618 TGAATCTTTCTAGCAGAGTAGCGT 59.600 41.667 0.00 0.00 40.15 5.07
7190 7440 4.926244 TGAATCTTTCTAGCAGAGTAGCG 58.074 43.478 0.00 0.00 40.15 4.26
7191 7441 6.816140 ACTTTGAATCTTTCTAGCAGAGTAGC 59.184 38.462 0.00 0.00 0.00 3.58
7192 7442 7.219917 CGACTTTGAATCTTTCTAGCAGAGTAG 59.780 40.741 0.00 0.00 0.00 2.57
7193 7443 7.030165 CGACTTTGAATCTTTCTAGCAGAGTA 58.970 38.462 0.00 0.00 0.00 2.59
7194 7444 5.866633 CGACTTTGAATCTTTCTAGCAGAGT 59.133 40.000 0.00 0.00 0.00 3.24
7195 7445 6.096036 TCGACTTTGAATCTTTCTAGCAGAG 58.904 40.000 0.00 0.00 0.00 3.35
7196 7446 6.025749 TCGACTTTGAATCTTTCTAGCAGA 57.974 37.500 0.00 0.00 0.00 4.26
7197 7447 5.220378 GCTCGACTTTGAATCTTTCTAGCAG 60.220 44.000 0.00 0.00 0.00 4.24
7198 7448 4.627467 GCTCGACTTTGAATCTTTCTAGCA 59.373 41.667 0.00 0.00 0.00 3.49
7199 7449 4.627467 TGCTCGACTTTGAATCTTTCTAGC 59.373 41.667 0.00 0.00 0.00 3.42
7200 7450 6.756074 AGATGCTCGACTTTGAATCTTTCTAG 59.244 38.462 0.00 0.00 0.00 2.43
7201 7451 6.634805 AGATGCTCGACTTTGAATCTTTCTA 58.365 36.000 0.00 0.00 0.00 2.10
7202 7452 5.486526 AGATGCTCGACTTTGAATCTTTCT 58.513 37.500 0.00 0.00 0.00 2.52
7203 7453 5.793026 AGATGCTCGACTTTGAATCTTTC 57.207 39.130 0.00 0.00 0.00 2.62
7204 7454 5.702670 TGAAGATGCTCGACTTTGAATCTTT 59.297 36.000 6.98 0.00 35.18 2.52
7205 7455 5.240891 TGAAGATGCTCGACTTTGAATCTT 58.759 37.500 5.52 5.52 37.14 2.40
7206 7456 4.825422 TGAAGATGCTCGACTTTGAATCT 58.175 39.130 0.00 0.00 0.00 2.40
7207 7457 4.867047 TCTGAAGATGCTCGACTTTGAATC 59.133 41.667 0.00 0.00 0.00 2.52
7208 7458 4.825422 TCTGAAGATGCTCGACTTTGAAT 58.175 39.130 0.00 0.00 0.00 2.57
7209 7459 4.257267 TCTGAAGATGCTCGACTTTGAA 57.743 40.909 0.00 0.00 0.00 2.69
7210 7460 3.942130 TCTGAAGATGCTCGACTTTGA 57.058 42.857 0.00 0.00 0.00 2.69
7211 7461 3.742882 TGTTCTGAAGATGCTCGACTTTG 59.257 43.478 0.00 0.00 0.00 2.77
7212 7462 3.995199 TGTTCTGAAGATGCTCGACTTT 58.005 40.909 0.00 0.00 0.00 2.66
7213 7463 3.667497 TGTTCTGAAGATGCTCGACTT 57.333 42.857 0.00 0.00 0.00 3.01
7214 7464 3.883830 ATGTTCTGAAGATGCTCGACT 57.116 42.857 0.00 0.00 0.00 4.18
7215 7465 6.595772 ATTTATGTTCTGAAGATGCTCGAC 57.404 37.500 10.03 0.00 0.00 4.20
7216 7466 7.492524 AGTATTTATGTTCTGAAGATGCTCGA 58.507 34.615 10.03 0.00 0.00 4.04
7217 7467 7.095857 GGAGTATTTATGTTCTGAAGATGCTCG 60.096 40.741 10.03 0.00 0.00 5.03
7218 7468 7.172361 GGGAGTATTTATGTTCTGAAGATGCTC 59.828 40.741 10.03 3.49 0.00 4.26
7219 7469 6.995091 GGGAGTATTTATGTTCTGAAGATGCT 59.005 38.462 10.03 0.00 0.00 3.79
7220 7470 6.995091 AGGGAGTATTTATGTTCTGAAGATGC 59.005 38.462 10.03 0.00 0.00 3.91
7221 7471 8.970859 AAGGGAGTATTTATGTTCTGAAGATG 57.029 34.615 10.03 0.00 0.00 2.90
7223 7473 9.268282 AGTAAGGGAGTATTTATGTTCTGAAGA 57.732 33.333 0.00 0.00 0.00 2.87
7236 7486 9.939424 AGATCACTACTTTAGTAAGGGAGTATT 57.061 33.333 9.43 1.02 37.23 1.89
7239 7489 9.765295 TTTAGATCACTACTTTAGTAAGGGAGT 57.235 33.333 4.07 4.07 37.23 3.85
7241 7491 8.680903 CGTTTAGATCACTACTTTAGTAAGGGA 58.319 37.037 0.00 0.00 37.23 4.20
7242 7492 7.434602 GCGTTTAGATCACTACTTTAGTAAGGG 59.565 40.741 0.00 0.00 37.23 3.95
7243 7493 8.189460 AGCGTTTAGATCACTACTTTAGTAAGG 58.811 37.037 0.00 0.00 37.23 2.69
7244 7494 9.224058 GAGCGTTTAGATCACTACTTTAGTAAG 57.776 37.037 0.00 0.00 37.23 2.34
7245 7495 8.954350 AGAGCGTTTAGATCACTACTTTAGTAA 58.046 33.333 0.00 0.00 37.82 2.24
7246 7496 8.503458 AGAGCGTTTAGATCACTACTTTAGTA 57.497 34.615 0.00 0.00 37.82 1.82
7247 7497 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
7248 7498 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
7253 7503 9.771915 GGTATATAAGAGCGTTTAGATCACTAC 57.228 37.037 0.00 0.00 37.82 2.73
7254 7504 9.736414 AGGTATATAAGAGCGTTTAGATCACTA 57.264 33.333 0.00 0.00 37.82 2.74
7255 7505 8.638629 AGGTATATAAGAGCGTTTAGATCACT 57.361 34.615 0.00 0.00 37.82 3.41
7256 7506 7.969508 GGAGGTATATAAGAGCGTTTAGATCAC 59.030 40.741 0.00 0.00 37.82 3.06
7257 7507 7.889073 AGGAGGTATATAAGAGCGTTTAGATCA 59.111 37.037 0.00 0.00 37.82 2.92
7258 7508 8.283699 AGGAGGTATATAAGAGCGTTTAGATC 57.716 38.462 0.00 0.00 35.01 2.75
7259 7509 8.110908 AGAGGAGGTATATAAGAGCGTTTAGAT 58.889 37.037 0.00 0.00 0.00 1.98
7260 7510 7.390996 CAGAGGAGGTATATAAGAGCGTTTAGA 59.609 40.741 0.00 0.00 0.00 2.10
7261 7511 7.175293 ACAGAGGAGGTATATAAGAGCGTTTAG 59.825 40.741 0.00 0.00 0.00 1.85
7262 7512 7.002879 ACAGAGGAGGTATATAAGAGCGTTTA 58.997 38.462 0.00 0.00 0.00 2.01
7263 7513 5.834204 ACAGAGGAGGTATATAAGAGCGTTT 59.166 40.000 0.00 0.00 0.00 3.60
7264 7514 5.386924 ACAGAGGAGGTATATAAGAGCGTT 58.613 41.667 0.00 0.00 0.00 4.84
7265 7515 4.988029 ACAGAGGAGGTATATAAGAGCGT 58.012 43.478 0.00 0.00 0.00 5.07
7266 7516 7.175293 AGTTTACAGAGGAGGTATATAAGAGCG 59.825 40.741 0.00 0.00 0.00 5.03
7267 7517 8.411991 AGTTTACAGAGGAGGTATATAAGAGC 57.588 38.462 0.00 0.00 0.00 4.09
7277 7527 8.862085 GCTCTTATATTAGTTTACAGAGGAGGT 58.138 37.037 0.00 0.00 0.00 3.85
7278 7528 8.024285 CGCTCTTATATTAGTTTACAGAGGAGG 58.976 40.741 0.00 0.00 0.00 4.30
7279 7529 8.569641 ACGCTCTTATATTAGTTTACAGAGGAG 58.430 37.037 0.00 0.00 0.00 3.69
7280 7530 8.461249 ACGCTCTTATATTAGTTTACAGAGGA 57.539 34.615 0.00 0.00 0.00 3.71
7281 7531 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
7329 7579 9.106070 CCCTCTGTAAACTAATATAAAAGCGTT 57.894 33.333 0.00 0.00 0.00 4.84
7330 7580 8.480501 TCCCTCTGTAAACTAATATAAAAGCGT 58.519 33.333 0.00 0.00 0.00 5.07
7331 7581 8.882415 TCCCTCTGTAAACTAATATAAAAGCG 57.118 34.615 0.00 0.00 0.00 4.68
7332 7582 9.833917 ACTCCCTCTGTAAACTAATATAAAAGC 57.166 33.333 0.00 0.00 0.00 3.51
7365 7615 9.947189 TCTTCCTAATTGTTACTCCCTCTATAA 57.053 33.333 0.00 0.00 0.00 0.98
7366 7616 9.589461 CTCTTCCTAATTGTTACTCCCTCTATA 57.411 37.037 0.00 0.00 0.00 1.31
7367 7617 7.511028 CCTCTTCCTAATTGTTACTCCCTCTAT 59.489 40.741 0.00 0.00 0.00 1.98
7368 7618 6.839657 CCTCTTCCTAATTGTTACTCCCTCTA 59.160 42.308 0.00 0.00 0.00 2.43
7369 7619 5.663556 CCTCTTCCTAATTGTTACTCCCTCT 59.336 44.000 0.00 0.00 0.00 3.69
7370 7620 5.661759 TCCTCTTCCTAATTGTTACTCCCTC 59.338 44.000 0.00 0.00 0.00 4.30
7371 7621 5.600749 TCCTCTTCCTAATTGTTACTCCCT 58.399 41.667 0.00 0.00 0.00 4.20
7372 7622 5.952347 TCCTCTTCCTAATTGTTACTCCC 57.048 43.478 0.00 0.00 0.00 4.30
7373 7623 5.760743 GCATCCTCTTCCTAATTGTTACTCC 59.239 44.000 0.00 0.00 0.00 3.85
7374 7624 6.852858 GCATCCTCTTCCTAATTGTTACTC 57.147 41.667 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.