Multiple sequence alignment - TraesCS1A01G337300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G337300 chr1A 100.000 5161 0 0 1 5161 526746921 526752081 0.000000e+00 9531.0
1 TraesCS1A01G337300 chr1A 74.286 1610 356 50 2491 4074 558539749 558538172 1.220000e-175 627.0
2 TraesCS1A01G337300 chr1A 98.706 309 4 0 4387 4695 528063646 528063338 2.720000e-152 549.0
3 TraesCS1A01G337300 chr1A 92.199 282 20 2 683 964 483521952 483522231 1.040000e-106 398.0
4 TraesCS1A01G337300 chr1A 91.844 282 21 2 683 964 509788565 509788286 4.840000e-105 392.0
5 TraesCS1A01G337300 chr1A 91.882 271 22 0 694 964 509715298 509715028 3.770000e-101 379.0
6 TraesCS1A01G337300 chr1A 90.426 282 25 2 683 964 499288660 499288939 2.270000e-98 370.0
7 TraesCS1A01G337300 chr1A 90.071 282 26 2 683 964 501401726 501402005 1.060000e-96 364.0
8 TraesCS1A01G337300 chr1B 95.998 2349 89 2 966 3314 580519361 580521704 0.000000e+00 3812.0
9 TraesCS1A01G337300 chr1B 96.059 1091 23 4 3306 4389 580523559 580524636 0.000000e+00 1759.0
10 TraesCS1A01G337300 chr1B 94.697 528 17 1 5 521 66190257 66189730 0.000000e+00 809.0
11 TraesCS1A01G337300 chr1B 97.306 297 8 0 4696 4992 580524628 580524924 5.960000e-139 505.0
12 TraesCS1A01G337300 chr1B 77.251 822 141 35 3254 4059 643114780 643113989 1.710000e-119 440.0
13 TraesCS1A01G337300 chr1B 95.455 176 3 3 519 691 580519190 580519363 5.090000e-70 276.0
14 TraesCS1A01G337300 chr1B 92.045 88 7 0 5074 5161 580524923 580525010 1.950000e-24 124.0
15 TraesCS1A01G337300 chr6A 96.015 527 10 1 7 522 15900443 15899917 0.000000e+00 846.0
16 TraesCS1A01G337300 chr7A 95.265 528 14 1 5 521 75434891 75434364 0.000000e+00 826.0
17 TraesCS1A01G337300 chr7A 98.428 318 3 2 4379 4696 726413079 726412764 4.510000e-155 558.0
18 TraesCS1A01G337300 chr7A 91.379 174 15 0 4387 4560 193462083 193461910 6.680000e-59 239.0
19 TraesCS1A01G337300 chr5B 95.265 528 14 1 5 521 7069822 7069295 0.000000e+00 826.0
20 TraesCS1A01G337300 chr5B 94.925 532 16 1 5 525 642329145 642329676 0.000000e+00 822.0
21 TraesCS1A01G337300 chr5B 91.000 100 7 2 4987 5084 664024229 664024328 3.240000e-27 134.0
22 TraesCS1A01G337300 chr5B 86.957 92 6 2 4110 4195 455629446 455629537 1.180000e-16 99.0
23 TraesCS1A01G337300 chr3A 94.559 533 18 1 5 526 706761234 706760702 0.000000e+00 813.0
24 TraesCS1A01G337300 chr3A 83.030 165 17 7 375 528 721822445 721822281 6.970000e-29 139.0
25 TraesCS1A01G337300 chr3A 79.114 158 22 7 376 522 410048291 410048448 1.180000e-16 99.0
26 TraesCS1A01G337300 chr3A 78.788 165 18 10 374 523 42047281 42047119 1.530000e-15 95.3
27 TraesCS1A01G337300 chr3A 87.013 77 9 1 446 521 36792689 36792765 9.210000e-13 86.1
28 TraesCS1A01G337300 chr3B 94.697 528 17 1 5 521 8787847 8787320 0.000000e+00 809.0
29 TraesCS1A01G337300 chr3B 89.840 187 18 1 4390 4576 819063445 819063260 6.680000e-59 239.0
30 TraesCS1A01G337300 chr5A 97.397 461 12 0 5 465 471505286 471504826 0.000000e+00 785.0
31 TraesCS1A01G337300 chr5A 99.026 308 3 0 4390 4697 633021938 633021631 2.100000e-153 553.0
32 TraesCS1A01G337300 chrUn 93.409 531 22 3 5 522 401979733 401979203 0.000000e+00 774.0
33 TraesCS1A01G337300 chrUn 97.561 41 1 0 4110 4150 226968125 226968085 2.580000e-08 71.3
34 TraesCS1A01G337300 chrUn 97.561 41 1 0 4110 4150 250249299 250249259 2.580000e-08 71.3
35 TraesCS1A01G337300 chr4A 98.361 305 5 0 4390 4694 586765453 586765757 2.110000e-148 536.0
36 TraesCS1A01G337300 chr4A 91.275 149 11 2 685 831 599511476 599511328 8.760000e-48 202.0
37 TraesCS1A01G337300 chr4A 94.565 92 5 0 4986 5077 107422479 107422570 5.390000e-30 143.0
38 TraesCS1A01G337300 chr1D 85.267 543 55 15 3025 3559 428629561 428630086 2.110000e-148 536.0
39 TraesCS1A01G337300 chr1D 81.739 115 15 4 413 521 19559011 19559125 1.980000e-14 91.6
40 TraesCS1A01G337300 chr7B 89.389 311 30 3 4386 4695 742186475 742186783 6.270000e-104 388.0
41 TraesCS1A01G337300 chr2B 87.838 296 29 3 4391 4686 767690246 767689958 1.780000e-89 340.0
42 TraesCS1A01G337300 chr5D 91.000 200 12 2 4390 4583 301992812 301992613 1.100000e-66 265.0
43 TraesCS1A01G337300 chr5D 93.000 100 5 2 4604 4703 301992320 301992223 1.500000e-30 145.0
44 TraesCS1A01G337300 chr5D 92.632 95 7 0 4990 5084 250069713 250069619 2.510000e-28 137.0
45 TraesCS1A01G337300 chr6B 92.265 181 11 3 699 876 665415609 665415429 2.390000e-63 254.0
46 TraesCS1A01G337300 chr6B 92.929 99 5 2 4983 5081 431701346 431701442 5.390000e-30 143.0
47 TraesCS1A01G337300 chr6D 75.000 572 115 21 3489 4047 32907261 32907817 6.680000e-59 239.0
48 TraesCS1A01G337300 chr4B 76.976 291 57 10 687 972 7048314 7048029 1.920000e-34 158.0
49 TraesCS1A01G337300 chr4B 89.247 93 4 2 4110 4196 209076860 209076768 1.520000e-20 111.0
50 TraesCS1A01G337300 chr7D 95.506 89 4 0 4988 5076 49381895 49381983 5.390000e-30 143.0
51 TraesCS1A01G337300 chr2A 95.455 88 4 0 4990 5077 7558747 7558660 1.940000e-29 141.0
52 TraesCS1A01G337300 chr4D 92.079 101 5 3 4989 5089 23978732 23978635 6.970000e-29 139.0
53 TraesCS1A01G337300 chr4D 92.553 94 7 0 4991 5084 371926814 371926907 9.010000e-28 135.0
54 TraesCS1A01G337300 chr3D 94.444 90 4 1 4991 5080 180394992 180394904 2.510000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G337300 chr1A 526746921 526752081 5160 False 9531.0 9531 100.0000 1 5161 1 chr1A.!!$F4 5160
1 TraesCS1A01G337300 chr1A 558538172 558539749 1577 True 627.0 627 74.2860 2491 4074 1 chr1A.!!$R4 1583
2 TraesCS1A01G337300 chr1B 580519190 580525010 5820 False 1295.2 3812 95.3726 519 5161 5 chr1B.!!$F1 4642
3 TraesCS1A01G337300 chr1B 66189730 66190257 527 True 809.0 809 94.6970 5 521 1 chr1B.!!$R1 516
4 TraesCS1A01G337300 chr1B 643113989 643114780 791 True 440.0 440 77.2510 3254 4059 1 chr1B.!!$R2 805
5 TraesCS1A01G337300 chr6A 15899917 15900443 526 True 846.0 846 96.0150 7 522 1 chr6A.!!$R1 515
6 TraesCS1A01G337300 chr7A 75434364 75434891 527 True 826.0 826 95.2650 5 521 1 chr7A.!!$R1 516
7 TraesCS1A01G337300 chr5B 7069295 7069822 527 True 826.0 826 95.2650 5 521 1 chr5B.!!$R1 516
8 TraesCS1A01G337300 chr5B 642329145 642329676 531 False 822.0 822 94.9250 5 525 1 chr5B.!!$F2 520
9 TraesCS1A01G337300 chr3A 706760702 706761234 532 True 813.0 813 94.5590 5 526 1 chr3A.!!$R2 521
10 TraesCS1A01G337300 chr3B 8787320 8787847 527 True 809.0 809 94.6970 5 521 1 chr3B.!!$R1 516
11 TraesCS1A01G337300 chrUn 401979203 401979733 530 True 774.0 774 93.4090 5 522 1 chrUn.!!$R3 517
12 TraesCS1A01G337300 chr1D 428629561 428630086 525 False 536.0 536 85.2670 3025 3559 1 chr1D.!!$F2 534
13 TraesCS1A01G337300 chr5D 301992223 301992812 589 True 205.0 265 92.0000 4390 4703 2 chr5D.!!$R2 313
14 TraesCS1A01G337300 chr6D 32907261 32907817 556 False 239.0 239 75.0000 3489 4047 1 chr6D.!!$F1 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
925 941 0.032017 ACTGGAGCTTCCCGATACCT 60.032 55.0 0.00 0.0 35.03 3.08 F
959 975 0.249741 ACCTGAGGACGAACCAAACG 60.250 55.0 4.99 0.0 42.04 3.60 F
1506 1522 0.253327 CACCCAAACTAGGCCTCCTC 59.747 60.0 9.68 0.0 34.61 3.71 F
2004 2020 0.249447 AAGCAAAAGACGCCCAAAGC 60.249 50.0 0.00 0.0 38.52 3.51 F
3597 5493 0.613260 CAGTCGGATTGAAGGGGACA 59.387 55.0 0.00 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1962 1978 0.178301 GACCGTCTCCCCCAAGATTC 59.822 60.000 0.00 0.0 0.00 2.52 R
1978 1994 1.335051 GGCGTCTTTTGCTTCAAGACC 60.335 52.381 14.03 9.0 45.07 3.85 R
2790 2806 1.517361 CACTCCTCCGCATAGTGCA 59.483 57.895 2.63 0.0 45.36 4.57 R
3817 5721 0.743097 GAGGCCATCCTGAAACATGC 59.257 55.000 5.01 0.0 44.46 4.06 R
4990 7179 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.0 0.00 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
327 330 2.978010 CGCCGTCAAGCCAACCTT 60.978 61.111 0.00 0.00 0.00 3.50
642 658 9.831737 GATATGATACGAAAAATAAGCATTGCT 57.168 29.630 5.03 5.03 42.56 3.91
689 705 5.222079 TGTCACGGCATACCACAATATAT 57.778 39.130 0.00 0.00 34.57 0.86
690 706 6.347859 TGTCACGGCATACCACAATATATA 57.652 37.500 0.00 0.00 34.57 0.86
691 707 6.160684 TGTCACGGCATACCACAATATATAC 58.839 40.000 0.00 0.00 34.57 1.47
692 708 6.160684 GTCACGGCATACCACAATATATACA 58.839 40.000 0.00 0.00 34.57 2.29
693 709 6.647481 GTCACGGCATACCACAATATATACAA 59.353 38.462 0.00 0.00 34.57 2.41
694 710 6.647481 TCACGGCATACCACAATATATACAAC 59.353 38.462 0.00 0.00 34.57 3.32
695 711 5.636121 ACGGCATACCACAATATATACAACG 59.364 40.000 0.00 0.00 34.57 4.10
696 712 5.445407 CGGCATACCACAATATATACAACGC 60.445 44.000 0.00 0.00 34.57 4.84
697 713 5.445407 GGCATACCACAATATATACAACGCG 60.445 44.000 3.53 3.53 35.26 6.01
698 714 5.119588 GCATACCACAATATATACAACGCGT 59.880 40.000 5.58 5.58 0.00 6.01
699 715 6.347079 GCATACCACAATATATACAACGCGTT 60.347 38.462 20.79 20.79 0.00 4.84
700 716 7.569297 CATACCACAATATATACAACGCGTTT 58.431 34.615 24.21 15.97 0.00 3.60
701 717 5.802064 ACCACAATATATACAACGCGTTTG 58.198 37.500 24.21 19.40 41.49 2.93
708 724 4.978773 CAACGCGTTTGTTTCGGA 57.021 50.000 24.21 0.00 0.00 4.55
709 725 3.221834 CAACGCGTTTGTTTCGGAA 57.778 47.368 24.21 0.00 0.00 4.30
710 726 1.109296 CAACGCGTTTGTTTCGGAAG 58.891 50.000 24.21 2.67 0.00 3.46
711 727 1.008329 AACGCGTTTGTTTCGGAAGA 58.992 45.000 20.79 0.00 39.20 2.87
721 737 3.525619 TTCGGAAGAATGGTCACGG 57.474 52.632 0.00 0.00 46.92 4.94
722 738 0.682852 TTCGGAAGAATGGTCACGGT 59.317 50.000 0.00 0.00 46.92 4.83
723 739 0.682852 TCGGAAGAATGGTCACGGTT 59.317 50.000 0.00 0.00 37.03 4.44
724 740 1.071071 TCGGAAGAATGGTCACGGTTT 59.929 47.619 0.00 0.00 37.03 3.27
725 741 1.463444 CGGAAGAATGGTCACGGTTTC 59.537 52.381 0.00 0.00 0.00 2.78
726 742 1.810755 GGAAGAATGGTCACGGTTTCC 59.189 52.381 0.00 0.00 0.00 3.13
738 754 2.763651 GGTTTCCGATTACTGCGCT 58.236 52.632 9.73 0.00 0.00 5.92
739 755 1.084289 GGTTTCCGATTACTGCGCTT 58.916 50.000 9.73 0.00 0.00 4.68
740 756 1.467342 GGTTTCCGATTACTGCGCTTT 59.533 47.619 9.73 0.00 0.00 3.51
741 757 2.475685 GGTTTCCGATTACTGCGCTTTC 60.476 50.000 9.73 0.00 0.00 2.62
742 758 2.380084 TTCCGATTACTGCGCTTTCT 57.620 45.000 9.73 0.00 0.00 2.52
743 759 1.640428 TCCGATTACTGCGCTTTCTG 58.360 50.000 9.73 0.00 0.00 3.02
744 760 1.203758 TCCGATTACTGCGCTTTCTGA 59.796 47.619 9.73 0.00 0.00 3.27
745 761 1.999735 CCGATTACTGCGCTTTCTGAA 59.000 47.619 9.73 0.00 0.00 3.02
746 762 2.415168 CCGATTACTGCGCTTTCTGAAA 59.585 45.455 9.73 2.44 0.00 2.69
747 763 3.408150 CGATTACTGCGCTTTCTGAAAC 58.592 45.455 9.73 0.00 0.00 2.78
748 764 2.941891 TTACTGCGCTTTCTGAAACG 57.058 45.000 9.73 15.71 0.00 3.60
749 765 1.144969 TACTGCGCTTTCTGAAACGG 58.855 50.000 9.73 10.25 0.00 4.44
750 766 1.441016 CTGCGCTTTCTGAAACGGC 60.441 57.895 9.73 15.67 0.00 5.68
751 767 2.116736 CTGCGCTTTCTGAAACGGCA 62.117 55.000 9.73 17.33 0.00 5.69
752 768 1.725973 GCGCTTTCTGAAACGGCAC 60.726 57.895 19.12 6.85 0.00 5.01
753 769 1.082104 CGCTTTCTGAAACGGCACC 60.082 57.895 12.84 0.00 0.00 5.01
754 770 1.285950 GCTTTCTGAAACGGCACCC 59.714 57.895 8.87 0.00 0.00 4.61
755 771 1.452145 GCTTTCTGAAACGGCACCCA 61.452 55.000 8.87 0.00 0.00 4.51
756 772 0.593128 CTTTCTGAAACGGCACCCAG 59.407 55.000 0.00 0.00 0.00 4.45
757 773 1.452145 TTTCTGAAACGGCACCCAGC 61.452 55.000 0.00 0.00 44.65 4.85
761 777 2.841160 GAAACGGCACCCAGCGTTT 61.841 57.895 8.34 8.34 45.53 3.60
762 778 2.999363 GAAACGGCACCCAGCGTTTG 62.999 60.000 12.52 0.00 44.12 2.93
765 781 2.281900 GGCACCCAGCGTTTGGTA 60.282 61.111 0.00 0.00 46.25 3.25
766 782 2.622962 GGCACCCAGCGTTTGGTAC 61.623 63.158 0.00 0.00 46.25 3.34
779 795 3.910817 TGGTACGCCAACAACGTAT 57.089 47.368 0.00 0.00 46.52 3.06
780 796 2.166821 TGGTACGCCAACAACGTATT 57.833 45.000 0.00 0.00 46.52 1.89
781 797 2.067766 TGGTACGCCAACAACGTATTC 58.932 47.619 0.00 0.00 46.52 1.75
782 798 1.394572 GGTACGCCAACAACGTATTCC 59.605 52.381 0.00 0.00 46.52 3.01
783 799 1.059549 GTACGCCAACAACGTATTCCG 59.940 52.381 0.00 0.00 46.52 4.30
817 833 2.955614 CGATACGGAGGTTCACAAACT 58.044 47.619 0.00 0.00 35.61 2.66
818 834 2.921754 CGATACGGAGGTTCACAAACTC 59.078 50.000 0.00 0.00 35.61 3.01
819 835 2.427232 TACGGAGGTTCACAAACTCG 57.573 50.000 0.00 0.00 35.61 4.18
820 836 0.748450 ACGGAGGTTCACAAACTCGA 59.252 50.000 0.00 0.00 35.61 4.04
821 837 1.137479 ACGGAGGTTCACAAACTCGAA 59.863 47.619 0.00 0.00 35.61 3.71
822 838 2.206750 CGGAGGTTCACAAACTCGAAA 58.793 47.619 0.00 0.00 35.61 3.46
823 839 2.610374 CGGAGGTTCACAAACTCGAAAA 59.390 45.455 0.00 0.00 35.61 2.29
824 840 3.545426 CGGAGGTTCACAAACTCGAAAAC 60.545 47.826 0.00 0.00 35.61 2.43
825 841 3.375922 GGAGGTTCACAAACTCGAAAACA 59.624 43.478 0.00 0.00 35.61 2.83
826 842 4.340263 GAGGTTCACAAACTCGAAAACAC 58.660 43.478 0.00 0.00 35.61 3.32
827 843 3.128068 AGGTTCACAAACTCGAAAACACC 59.872 43.478 0.00 0.00 35.61 4.16
828 844 3.431856 GTTCACAAACTCGAAAACACCC 58.568 45.455 0.00 0.00 32.36 4.61
829 845 2.712709 TCACAAACTCGAAAACACCCA 58.287 42.857 0.00 0.00 0.00 4.51
830 846 2.680841 TCACAAACTCGAAAACACCCAG 59.319 45.455 0.00 0.00 0.00 4.45
831 847 2.680841 CACAAACTCGAAAACACCCAGA 59.319 45.455 0.00 0.00 0.00 3.86
832 848 3.315191 CACAAACTCGAAAACACCCAGAT 59.685 43.478 0.00 0.00 0.00 2.90
833 849 3.564225 ACAAACTCGAAAACACCCAGATC 59.436 43.478 0.00 0.00 0.00 2.75
834 850 2.080286 ACTCGAAAACACCCAGATCG 57.920 50.000 0.00 0.00 34.98 3.69
835 851 1.616865 ACTCGAAAACACCCAGATCGA 59.383 47.619 0.00 0.00 39.91 3.59
836 852 2.363788 TCGAAAACACCCAGATCGAG 57.636 50.000 0.00 0.00 37.59 4.04
837 853 1.067142 TCGAAAACACCCAGATCGAGG 60.067 52.381 2.77 2.77 37.59 4.63
838 854 1.087501 GAAAACACCCAGATCGAGGC 58.912 55.000 4.14 0.00 0.00 4.70
839 855 0.693049 AAAACACCCAGATCGAGGCT 59.307 50.000 4.14 0.00 0.00 4.58
840 856 0.036010 AAACACCCAGATCGAGGCTG 60.036 55.000 10.28 10.28 0.00 4.85
841 857 0.904865 AACACCCAGATCGAGGCTGA 60.905 55.000 16.99 0.00 35.39 4.26
842 858 0.689080 ACACCCAGATCGAGGCTGAT 60.689 55.000 16.99 0.00 35.39 2.90
843 859 0.467384 CACCCAGATCGAGGCTGATT 59.533 55.000 16.99 3.47 35.39 2.57
844 860 1.688735 CACCCAGATCGAGGCTGATTA 59.311 52.381 16.99 0.00 35.39 1.75
845 861 1.967066 ACCCAGATCGAGGCTGATTAG 59.033 52.381 16.99 7.41 35.39 1.73
846 862 1.274728 CCCAGATCGAGGCTGATTAGG 59.725 57.143 16.99 7.79 35.39 2.69
847 863 2.242926 CCAGATCGAGGCTGATTAGGA 58.757 52.381 16.99 0.00 35.39 2.94
848 864 2.630098 CCAGATCGAGGCTGATTAGGAA 59.370 50.000 16.99 0.00 35.39 3.36
849 865 3.070159 CCAGATCGAGGCTGATTAGGAAA 59.930 47.826 16.99 0.00 35.39 3.13
850 866 4.305769 CAGATCGAGGCTGATTAGGAAAG 58.694 47.826 11.50 0.00 35.39 2.62
851 867 2.604046 TCGAGGCTGATTAGGAAAGC 57.396 50.000 0.00 0.00 36.17 3.51
852 868 1.202417 TCGAGGCTGATTAGGAAAGCG 60.202 52.381 0.00 0.00 37.83 4.68
853 869 1.587547 GAGGCTGATTAGGAAAGCGG 58.412 55.000 0.00 0.00 37.83 5.52
854 870 0.181350 AGGCTGATTAGGAAAGCGGG 59.819 55.000 0.00 0.00 37.83 6.13
855 871 0.180406 GGCTGATTAGGAAAGCGGGA 59.820 55.000 0.00 0.00 37.83 5.14
856 872 1.587547 GCTGATTAGGAAAGCGGGAG 58.412 55.000 0.00 0.00 0.00 4.30
857 873 1.134371 GCTGATTAGGAAAGCGGGAGT 60.134 52.381 0.00 0.00 0.00 3.85
858 874 2.555199 CTGATTAGGAAAGCGGGAGTG 58.445 52.381 0.00 0.00 0.00 3.51
859 875 1.209504 TGATTAGGAAAGCGGGAGTGG 59.790 52.381 0.00 0.00 0.00 4.00
860 876 0.546598 ATTAGGAAAGCGGGAGTGGG 59.453 55.000 0.00 0.00 0.00 4.61
861 877 1.559065 TTAGGAAAGCGGGAGTGGGG 61.559 60.000 0.00 0.00 0.00 4.96
874 890 4.860881 TGGGGCGGCCAAACCAAA 62.861 61.111 30.95 2.54 39.03 3.28
875 891 4.308458 GGGGCGGCCAAACCAAAC 62.308 66.667 30.95 5.52 39.03 2.93
876 892 3.541713 GGGCGGCCAAACCAAACA 61.542 61.111 25.33 0.00 39.03 2.83
877 893 2.279851 GGCGGCCAAACCAAACAC 60.280 61.111 15.62 0.00 39.03 3.32
878 894 2.496817 GCGGCCAAACCAAACACA 59.503 55.556 2.24 0.00 39.03 3.72
879 895 1.068921 GCGGCCAAACCAAACACAT 59.931 52.632 2.24 0.00 39.03 3.21
880 896 0.943835 GCGGCCAAACCAAACACATC 60.944 55.000 2.24 0.00 39.03 3.06
881 897 0.387202 CGGCCAAACCAAACACATCA 59.613 50.000 2.24 0.00 39.03 3.07
882 898 1.864565 GGCCAAACCAAACACATCAC 58.135 50.000 0.00 0.00 38.86 3.06
883 899 1.486439 GCCAAACCAAACACATCACG 58.514 50.000 0.00 0.00 0.00 4.35
884 900 1.202359 GCCAAACCAAACACATCACGT 60.202 47.619 0.00 0.00 0.00 4.49
885 901 2.033550 GCCAAACCAAACACATCACGTA 59.966 45.455 0.00 0.00 0.00 3.57
886 902 3.305064 GCCAAACCAAACACATCACGTAT 60.305 43.478 0.00 0.00 0.00 3.06
887 903 4.794655 GCCAAACCAAACACATCACGTATT 60.795 41.667 0.00 0.00 0.00 1.89
888 904 4.915085 CCAAACCAAACACATCACGTATTC 59.085 41.667 0.00 0.00 0.00 1.75
889 905 4.398549 AACCAAACACATCACGTATTCG 57.601 40.909 0.00 0.00 43.34 3.34
905 921 6.956299 CGTATTCGTAAAGAAGAAAAGGGA 57.044 37.500 0.00 0.00 42.92 4.20
906 922 7.355332 CGTATTCGTAAAGAAGAAAAGGGAA 57.645 36.000 0.00 0.00 42.92 3.97
907 923 7.232300 CGTATTCGTAAAGAAGAAAAGGGAAC 58.768 38.462 0.00 0.00 42.92 3.62
908 924 7.117379 CGTATTCGTAAAGAAGAAAAGGGAACT 59.883 37.037 0.00 0.00 42.92 3.01
909 925 6.613755 TTCGTAAAGAAGAAAAGGGAACTG 57.386 37.500 0.00 0.00 35.91 3.16
910 926 5.061179 TCGTAAAGAAGAAAAGGGAACTGG 58.939 41.667 0.00 0.00 42.68 4.00
911 927 5.061179 CGTAAAGAAGAAAAGGGAACTGGA 58.939 41.667 0.00 0.00 42.68 3.86
912 928 5.179555 CGTAAAGAAGAAAAGGGAACTGGAG 59.820 44.000 0.00 0.00 42.68 3.86
913 929 3.147553 AGAAGAAAAGGGAACTGGAGC 57.852 47.619 0.00 0.00 42.68 4.70
914 930 2.713708 AGAAGAAAAGGGAACTGGAGCT 59.286 45.455 0.00 0.00 42.68 4.09
915 931 3.139211 AGAAGAAAAGGGAACTGGAGCTT 59.861 43.478 0.00 0.00 42.68 3.74
916 932 3.147553 AGAAAAGGGAACTGGAGCTTC 57.852 47.619 0.00 0.00 42.68 3.86
917 933 2.163509 GAAAAGGGAACTGGAGCTTCC 58.836 52.381 0.00 0.00 42.68 3.46
919 935 2.269241 GGGAACTGGAGCTTCCCG 59.731 66.667 4.65 0.00 45.97 5.14
920 936 2.291043 GGGAACTGGAGCTTCCCGA 61.291 63.158 4.65 0.00 45.97 5.14
921 937 1.627297 GGGAACTGGAGCTTCCCGAT 61.627 60.000 4.65 0.00 45.97 4.18
922 938 1.120530 GGAACTGGAGCTTCCCGATA 58.879 55.000 0.00 0.00 35.03 2.92
923 939 1.202545 GGAACTGGAGCTTCCCGATAC 60.203 57.143 0.00 0.00 35.03 2.24
924 940 0.831307 AACTGGAGCTTCCCGATACC 59.169 55.000 0.00 0.00 35.03 2.73
925 941 0.032017 ACTGGAGCTTCCCGATACCT 60.032 55.000 0.00 0.00 35.03 3.08
926 942 1.123928 CTGGAGCTTCCCGATACCTT 58.876 55.000 0.00 0.00 35.03 3.50
927 943 2.317040 CTGGAGCTTCCCGATACCTTA 58.683 52.381 0.00 0.00 35.03 2.69
928 944 2.698797 CTGGAGCTTCCCGATACCTTAA 59.301 50.000 0.00 0.00 35.03 1.85
929 945 2.433239 TGGAGCTTCCCGATACCTTAAC 59.567 50.000 0.00 0.00 35.03 2.01
930 946 2.224233 GGAGCTTCCCGATACCTTAACC 60.224 54.545 0.00 0.00 0.00 2.85
931 947 1.411612 AGCTTCCCGATACCTTAACCG 59.588 52.381 0.00 0.00 0.00 4.44
932 948 1.410153 GCTTCCCGATACCTTAACCGA 59.590 52.381 0.00 0.00 0.00 4.69
933 949 2.159057 GCTTCCCGATACCTTAACCGAA 60.159 50.000 0.00 0.00 0.00 4.30
934 950 3.714391 CTTCCCGATACCTTAACCGAAG 58.286 50.000 0.00 0.00 34.63 3.79
935 951 3.017048 TCCCGATACCTTAACCGAAGA 57.983 47.619 0.00 0.00 37.33 2.87
936 952 2.689983 TCCCGATACCTTAACCGAAGAC 59.310 50.000 0.00 0.00 37.33 3.01
937 953 2.428171 CCCGATACCTTAACCGAAGACA 59.572 50.000 0.00 0.00 37.33 3.41
938 954 3.069158 CCCGATACCTTAACCGAAGACAT 59.931 47.826 0.00 0.00 37.33 3.06
939 955 4.442472 CCCGATACCTTAACCGAAGACATT 60.442 45.833 0.00 0.00 37.33 2.71
940 956 5.221303 CCCGATACCTTAACCGAAGACATTA 60.221 44.000 0.00 0.00 37.33 1.90
941 957 5.689068 CCGATACCTTAACCGAAGACATTAC 59.311 44.000 0.00 0.00 37.33 1.89
942 958 5.689068 CGATACCTTAACCGAAGACATTACC 59.311 44.000 0.00 0.00 37.33 2.85
943 959 6.460676 CGATACCTTAACCGAAGACATTACCT 60.461 42.308 0.00 0.00 37.33 3.08
944 960 4.828829 ACCTTAACCGAAGACATTACCTG 58.171 43.478 0.00 0.00 37.33 4.00
945 961 4.529377 ACCTTAACCGAAGACATTACCTGA 59.471 41.667 0.00 0.00 37.33 3.86
946 962 5.109903 CCTTAACCGAAGACATTACCTGAG 58.890 45.833 0.00 0.00 37.33 3.35
947 963 3.611766 AACCGAAGACATTACCTGAGG 57.388 47.619 0.00 0.00 0.00 3.86
948 964 2.816411 ACCGAAGACATTACCTGAGGA 58.184 47.619 4.99 0.00 0.00 3.71
949 965 2.496470 ACCGAAGACATTACCTGAGGAC 59.504 50.000 4.99 0.00 0.00 3.85
950 966 2.479730 CCGAAGACATTACCTGAGGACG 60.480 54.545 4.99 0.00 0.00 4.79
951 967 2.422479 CGAAGACATTACCTGAGGACGA 59.578 50.000 4.99 0.00 0.00 4.20
952 968 3.119602 CGAAGACATTACCTGAGGACGAA 60.120 47.826 4.99 0.00 0.00 3.85
953 969 3.870633 AGACATTACCTGAGGACGAAC 57.129 47.619 4.99 0.00 0.00 3.95
954 970 2.496470 AGACATTACCTGAGGACGAACC 59.504 50.000 4.99 0.00 39.35 3.62
955 971 2.232941 GACATTACCTGAGGACGAACCA 59.767 50.000 4.99 0.00 42.04 3.67
956 972 2.635915 ACATTACCTGAGGACGAACCAA 59.364 45.455 4.99 0.00 42.04 3.67
957 973 3.071892 ACATTACCTGAGGACGAACCAAA 59.928 43.478 4.99 0.00 42.04 3.28
958 974 2.825861 TACCTGAGGACGAACCAAAC 57.174 50.000 4.99 0.00 42.04 2.93
959 975 0.249741 ACCTGAGGACGAACCAAACG 60.250 55.000 4.99 0.00 42.04 3.60
960 976 1.566018 CCTGAGGACGAACCAAACGC 61.566 60.000 0.00 0.00 42.04 4.84
961 977 1.886861 CTGAGGACGAACCAAACGCG 61.887 60.000 3.53 3.53 42.04 6.01
962 978 1.952635 GAGGACGAACCAAACGCGT 60.953 57.895 5.58 5.58 42.04 6.01
964 980 2.166985 GACGAACCAAACGCGTCG 59.833 61.111 14.44 13.74 43.76 5.12
965 981 2.278726 ACGAACCAAACGCGTCGA 60.279 55.556 20.40 0.00 31.98 4.20
1009 1025 1.610038 TGCAGGCAACAATGTCTTCTG 59.390 47.619 0.00 0.00 38.74 3.02
1014 1030 4.398358 CAGGCAACAATGTCTTCTGATCAT 59.602 41.667 0.00 0.00 38.74 2.45
1023 1039 3.834231 TGTCTTCTGATCATGAGGTCACA 59.166 43.478 0.09 0.00 0.00 3.58
1026 1042 4.529769 TCTTCTGATCATGAGGTCACACTT 59.470 41.667 0.09 0.00 0.00 3.16
1039 1055 3.081061 GTCACACTTGCCATGTCCATAA 58.919 45.455 0.00 0.00 0.00 1.90
1058 1074 2.806608 ATGTTGCTGCTGTCTTTTGG 57.193 45.000 0.00 0.00 0.00 3.28
1119 1135 5.483583 AGATATGCTCTCCCTGATAGGTTTC 59.516 44.000 0.00 0.00 31.93 2.78
1187 1203 1.007387 GAAGCACCACCTTTTGCCG 60.007 57.895 0.00 0.00 39.75 5.69
1279 1295 0.322546 GTCCGGCCAAATCAGTTCCT 60.323 55.000 2.24 0.00 0.00 3.36
1283 1299 1.632589 GGCCAAATCAGTTCCTTGGT 58.367 50.000 0.00 0.00 41.46 3.67
1323 1339 6.055588 CCTAAAGAAACTCAACCTCTCAACA 58.944 40.000 0.00 0.00 0.00 3.33
1358 1374 2.983592 GTTGCCCCCACTGAACCG 60.984 66.667 0.00 0.00 0.00 4.44
1370 1386 2.099652 CTGAACCGCCTCCACAGACA 62.100 60.000 0.00 0.00 0.00 3.41
1453 1469 6.786967 ATTGCTCCAAGCTGAGAAAATTAT 57.213 33.333 5.28 0.00 42.97 1.28
1454 1470 6.594788 TTGCTCCAAGCTGAGAAAATTATT 57.405 33.333 5.28 0.00 42.97 1.40
1488 1504 5.843019 ACTCTTTTGTAGGAGAAATCCCA 57.157 39.130 0.00 0.00 34.11 4.37
1506 1522 0.253327 CACCCAAACTAGGCCTCCTC 59.747 60.000 9.68 0.00 34.61 3.71
1517 1533 2.403561 AGGCCTCCTCTCCAACTTATC 58.596 52.381 0.00 0.00 0.00 1.75
1536 1552 2.756829 TCCGATTTACGCTTCAACACA 58.243 42.857 0.00 0.00 41.07 3.72
1607 1623 8.011844 AGCATACAAGTTATGTCTCTGTCATA 57.988 34.615 0.00 0.00 42.70 2.15
1618 1634 7.609097 ATGTCTCTGTCATATAATCACCTGT 57.391 36.000 0.00 0.00 0.00 4.00
1619 1635 7.043961 TGTCTCTGTCATATAATCACCTGTC 57.956 40.000 0.00 0.00 0.00 3.51
1680 1696 3.338250 TGGCTGGCCTTAGGTGGG 61.338 66.667 13.05 0.00 36.94 4.61
1691 1707 3.330998 GCCTTAGGTGGGAATAGGCTAAT 59.669 47.826 0.00 0.00 46.14 1.73
1756 1772 1.301716 GTGCTTGGCTTGGAGTCGA 60.302 57.895 0.00 0.00 0.00 4.20
1796 1812 2.884012 TGCCACTTAACATTGGTGACAG 59.116 45.455 0.00 0.00 44.54 3.51
1871 1887 6.576778 AATACCAGCTTCCTTAGGTAATGT 57.423 37.500 0.00 0.00 39.80 2.71
1888 1904 6.890268 AGGTAATGTTTTAGGGATGGAAAGAC 59.110 38.462 0.00 0.00 0.00 3.01
1902 1918 2.238395 GGAAAGACTGGAGCTGGAGAAT 59.762 50.000 0.00 0.00 0.00 2.40
1911 1927 5.649831 ACTGGAGCTGGAGAATAACAATTTC 59.350 40.000 0.00 0.00 0.00 2.17
1933 1949 5.694995 TCACTGGTGAAATTCCTTCTTCTT 58.305 37.500 0.51 0.00 36.53 2.52
1945 1961 5.836024 TCCTTCTTCTTTGGGTAAGCTTA 57.164 39.130 0.86 0.86 33.66 3.09
1947 1963 6.607019 TCCTTCTTCTTTGGGTAAGCTTAAA 58.393 36.000 7.99 0.00 33.66 1.52
1949 1965 7.230712 TCCTTCTTCTTTGGGTAAGCTTAAAAG 59.769 37.037 17.52 17.52 33.66 2.27
1975 1991 6.001449 TGTACTATTTGAATCTTGGGGGAG 57.999 41.667 0.00 0.00 0.00 4.30
1978 1994 2.489938 TTTGAATCTTGGGGGAGACG 57.510 50.000 0.00 0.00 0.00 4.18
1979 1995 0.618458 TTGAATCTTGGGGGAGACGG 59.382 55.000 0.00 0.00 0.00 4.79
1999 2015 0.951558 TCTTGAAGCAAAAGACGCCC 59.048 50.000 0.00 0.00 0.00 6.13
2004 2020 0.249447 AAGCAAAAGACGCCCAAAGC 60.249 50.000 0.00 0.00 38.52 3.51
2027 2043 6.608808 AGCTGGGAGTTCTTTAATGCATTAAT 59.391 34.615 27.83 15.55 32.78 1.40
2076 2092 7.517614 TGCTCTAGATCGAAATCAACTAGAT 57.482 36.000 0.00 0.00 38.77 1.98
2079 2095 7.220741 TCTAGATCGAAATCAACTAGATGGG 57.779 40.000 0.00 0.00 36.96 4.00
2313 2329 1.609783 CGGGCCAATTCCCTCTTCT 59.390 57.895 4.39 0.00 44.30 2.85
2397 2413 0.830648 CGTCCAGCTTGGGGAATCTA 59.169 55.000 0.00 0.00 38.32 1.98
2398 2414 1.209504 CGTCCAGCTTGGGGAATCTAA 59.790 52.381 0.00 0.00 38.32 2.10
2408 2424 4.591321 TGGGGAATCTAAAACAGCTCAT 57.409 40.909 0.00 0.00 0.00 2.90
2415 2431 9.120538 GGGAATCTAAAACAGCTCATATTGTTA 57.879 33.333 0.00 0.00 36.56 2.41
2451 2467 3.265791 CACTCTCCAGAGCAACATAACC 58.734 50.000 3.33 0.00 45.79 2.85
2471 2487 2.307686 CCCTAGAAGTTGGTGCCCTTAA 59.692 50.000 0.00 0.00 0.00 1.85
2485 2501 3.886505 TGCCCTTAAACAAATCGTTGACT 59.113 39.130 0.00 0.00 38.07 3.41
2487 2503 5.531659 TGCCCTTAAACAAATCGTTGACTTA 59.468 36.000 0.00 0.00 38.07 2.24
2544 2560 4.169508 CTCACGTCTTAGGTCAATGTCAG 58.830 47.826 0.00 0.00 0.00 3.51
2649 2665 8.268850 ACATGGTTAATCTCTCACATAACAAC 57.731 34.615 0.00 0.00 31.46 3.32
2659 2675 5.924356 TCTCACATAACAACTTGTCAGGAA 58.076 37.500 0.00 0.00 0.00 3.36
2790 2806 8.712285 CATCAGTTTATCTTGATGGCAATTTT 57.288 30.769 6.58 0.00 35.73 1.82
2844 2860 1.339151 CCCTTGTGTCCTGCTACTTCC 60.339 57.143 0.00 0.00 0.00 3.46
2875 2891 8.990163 AAAAGGAAAGAAGTACTATTTGGTCA 57.010 30.769 9.96 0.00 0.00 4.02
2876 2892 8.622948 AAAGGAAAGAAGTACTATTTGGTCAG 57.377 34.615 9.96 0.00 0.00 3.51
2923 2941 7.856398 GCTTCTTATCACTCATCATGTTGATTG 59.144 37.037 14.76 14.76 34.28 2.67
2968 2986 4.281941 AGAAGAAGTCACACAGAGCATACA 59.718 41.667 0.00 0.00 0.00 2.29
2982 3000 5.804473 CAGAGCATACATATCATCGACTTCC 59.196 44.000 0.00 0.00 0.00 3.46
3155 3173 3.033909 TCGATCCCAAGATGAGATGTGT 58.966 45.455 0.00 0.00 30.90 3.72
3295 3320 6.883756 TCTGATTTATGTACTCATGCCAAACA 59.116 34.615 0.00 0.00 35.70 2.83
3297 3322 6.883756 TGATTTATGTACTCATGCCAAACAGA 59.116 34.615 0.00 0.00 35.70 3.41
3572 5468 3.378112 TCAAGTTCAGGCACAAGTTCAAG 59.622 43.478 0.00 0.00 0.00 3.02
3597 5493 0.613260 CAGTCGGATTGAAGGGGACA 59.387 55.000 0.00 0.00 0.00 4.02
3621 5517 9.203163 ACAATAGGATATATAGCTCCAGGTAAC 57.797 37.037 5.39 0.00 33.75 2.50
3749 5653 2.492881 CAATAGTGGCCAAGCATCAACA 59.507 45.455 7.24 0.00 0.00 3.33
3751 5655 0.892755 AGTGGCCAAGCATCAACATG 59.107 50.000 7.24 0.00 0.00 3.21
3817 5721 0.310854 GGCAAAAGACCAACGGACTG 59.689 55.000 0.00 0.00 0.00 3.51
3879 5783 5.147032 AGAGGAACTTCCCAGATCAGATAG 58.853 45.833 4.01 0.00 41.55 2.08
3914 5818 5.583854 CGATGTTCATCTCCAAGAAGAATGT 59.416 40.000 10.44 0.00 34.90 2.71
4150 6054 0.693767 AGGGAGGATCTGGCAGAAGG 60.694 60.000 22.84 0.00 33.73 3.46
4267 6178 3.788227 ACAAAGACCACAGATTAGCCA 57.212 42.857 0.00 0.00 0.00 4.75
4279 6190 4.230657 CAGATTAGCCACGAGTATAGTGC 58.769 47.826 0.00 0.00 40.62 4.40
4307 6218 9.869844 GAATCTGACACAATTAGCATATTGTAC 57.130 33.333 13.87 11.88 44.64 2.90
4347 6258 6.073765 GGGCATATACAACAGAACATACTTCG 60.074 42.308 0.00 0.00 0.00 3.79
4394 6305 4.737054 TCGACCAAACTAGTATCCGAAAC 58.263 43.478 0.00 0.00 0.00 2.78
4432 6343 3.180984 GCTACAACGGGCGATCTAG 57.819 57.895 0.00 0.00 0.00 2.43
4437 6348 0.389391 CAACGGGCGATCTAGTCCAT 59.611 55.000 0.00 0.00 35.10 3.41
4438 6349 0.674534 AACGGGCGATCTAGTCCATC 59.325 55.000 0.00 0.00 35.10 3.51
4439 6350 0.467474 ACGGGCGATCTAGTCCATCA 60.467 55.000 0.00 0.00 35.10 3.07
4480 6391 2.779742 TTTCCATCAAGGCCCACCGG 62.780 60.000 0.00 0.00 42.76 5.28
4517 6428 0.171903 CACACATGCAAAGGCTAGGC 59.828 55.000 8.55 8.55 41.91 3.93
4585 6502 3.223946 CCTGATTTTTAGGGGGCCC 57.776 57.895 15.76 15.76 0.00 5.80
4586 6503 0.755327 CCTGATTTTTAGGGGGCCCG 60.755 60.000 17.79 0.00 41.95 6.13
4588 6505 2.042333 ATTTTTAGGGGGCCCGCC 60.042 61.111 33.89 26.04 41.95 6.13
4590 6507 2.583298 ATTTTTAGGGGGCCCGCCTC 62.583 60.000 33.89 14.60 43.50 4.70
4595 6512 2.631457 TAGGGGGCCCGCCTCTAATT 62.631 60.000 33.89 16.92 43.50 1.40
4596 6513 2.151388 GGGGGCCCGCCTCTAATTA 61.151 63.158 28.36 0.00 36.64 1.40
4597 6514 1.712000 GGGGGCCCGCCTCTAATTAA 61.712 60.000 28.36 0.00 36.64 1.40
4600 6517 0.181824 GGCCCGCCTCTAATTAACCA 59.818 55.000 0.00 0.00 0.00 3.67
4602 6519 2.152016 GCCCGCCTCTAATTAACCATC 58.848 52.381 0.00 0.00 0.00 3.51
4608 6797 5.280521 CCGCCTCTAATTAACCATCCCTAAT 60.281 44.000 0.00 0.00 0.00 1.73
4620 6809 6.503560 ACCATCCCTAATTAATCCACGTAA 57.496 37.500 0.00 0.00 0.00 3.18
4645 6834 6.323739 AGTTAAGCCACTTTCCAAATTGAAGA 59.676 34.615 0.00 0.00 0.00 2.87
4695 6884 4.175337 GCCAGATAGCCACGCCCA 62.175 66.667 0.00 0.00 0.00 5.36
4699 6888 0.032678 CAGATAGCCACGCCCACTAG 59.967 60.000 0.00 0.00 0.00 2.57
4700 6889 0.397254 AGATAGCCACGCCCACTAGT 60.397 55.000 0.00 0.00 0.00 2.57
4701 6890 1.133575 AGATAGCCACGCCCACTAGTA 60.134 52.381 0.00 0.00 0.00 1.82
4702 6891 1.893801 GATAGCCACGCCCACTAGTAT 59.106 52.381 0.00 0.00 0.00 2.12
4703 6892 1.325355 TAGCCACGCCCACTAGTATC 58.675 55.000 0.00 0.00 0.00 2.24
4704 6893 0.397254 AGCCACGCCCACTAGTATCT 60.397 55.000 0.00 0.00 0.00 1.98
4705 6894 1.133575 AGCCACGCCCACTAGTATCTA 60.134 52.381 0.00 0.00 0.00 1.98
4728 6917 9.645059 TCTAGTGATAGAGTTCATTCTTGTTTG 57.355 33.333 0.00 0.00 0.00 2.93
4775 6964 2.848678 TAGAGTCCCTGCCACAGTAT 57.151 50.000 0.00 0.00 0.00 2.12
4944 7133 7.821134 AACATATTATAGGAAGAGGCCTCAT 57.179 36.000 33.90 23.93 39.50 2.90
4958 7147 2.135933 GCCTCATAGCCATGAACGTAC 58.864 52.381 0.00 0.00 40.66 3.67
4974 7163 2.952978 ACGTACCAACCATCTGCAAAAA 59.047 40.909 0.00 0.00 0.00 1.94
4983 7172 6.222389 CAACCATCTGCAAAAACAGGAAATA 58.778 36.000 0.00 0.00 38.26 1.40
4998 7187 9.682465 AAACAGGAAATAGTTAAATACTCCCTC 57.318 33.333 8.55 0.00 38.33 4.30
4999 7188 7.803131 ACAGGAAATAGTTAAATACTCCCTCC 58.197 38.462 8.55 1.35 38.33 4.30
5000 7189 6.929606 CAGGAAATAGTTAAATACTCCCTCCG 59.070 42.308 8.55 0.00 38.33 4.63
5001 7190 6.614496 AGGAAATAGTTAAATACTCCCTCCGT 59.386 38.462 8.55 0.00 38.33 4.69
5002 7191 6.927936 GGAAATAGTTAAATACTCCCTCCGTC 59.072 42.308 2.76 0.00 38.33 4.79
5003 7192 6.416631 AATAGTTAAATACTCCCTCCGTCC 57.583 41.667 0.00 0.00 38.33 4.79
5004 7193 3.036819 AGTTAAATACTCCCTCCGTCCC 58.963 50.000 0.00 0.00 28.23 4.46
5005 7194 2.767960 GTTAAATACTCCCTCCGTCCCA 59.232 50.000 0.00 0.00 0.00 4.37
5006 7195 1.201424 AAATACTCCCTCCGTCCCAC 58.799 55.000 0.00 0.00 0.00 4.61
5007 7196 0.042131 AATACTCCCTCCGTCCCACA 59.958 55.000 0.00 0.00 0.00 4.17
5008 7197 0.042131 ATACTCCCTCCGTCCCACAA 59.958 55.000 0.00 0.00 0.00 3.33
5009 7198 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.000 0.00 0.00 0.00 2.71
5010 7199 0.042131 ACTCCCTCCGTCCCACAATA 59.958 55.000 0.00 0.00 0.00 1.90
5011 7200 1.344087 ACTCCCTCCGTCCCACAATAT 60.344 52.381 0.00 0.00 0.00 1.28
5012 7201 2.090943 ACTCCCTCCGTCCCACAATATA 60.091 50.000 0.00 0.00 0.00 0.86
5013 7202 2.969950 CTCCCTCCGTCCCACAATATAA 59.030 50.000 0.00 0.00 0.00 0.98
5014 7203 2.969950 TCCCTCCGTCCCACAATATAAG 59.030 50.000 0.00 0.00 0.00 1.73
5015 7204 2.969950 CCCTCCGTCCCACAATATAAGA 59.030 50.000 0.00 0.00 0.00 2.10
5016 7205 3.006967 CCCTCCGTCCCACAATATAAGAG 59.993 52.174 0.00 0.00 0.00 2.85
5017 7206 3.555168 CCTCCGTCCCACAATATAAGAGC 60.555 52.174 0.00 0.00 0.00 4.09
5018 7207 2.035449 TCCGTCCCACAATATAAGAGCG 59.965 50.000 0.00 0.00 0.00 5.03
5019 7208 1.792949 CGTCCCACAATATAAGAGCGC 59.207 52.381 0.00 0.00 0.00 5.92
5020 7209 2.545952 CGTCCCACAATATAAGAGCGCT 60.546 50.000 11.27 11.27 0.00 5.92
5021 7210 3.467803 GTCCCACAATATAAGAGCGCTT 58.532 45.455 13.26 8.09 38.15 4.68
5022 7211 3.877508 GTCCCACAATATAAGAGCGCTTT 59.122 43.478 13.26 1.42 35.56 3.51
5023 7212 4.335594 GTCCCACAATATAAGAGCGCTTTT 59.664 41.667 17.98 17.98 35.56 2.27
5024 7213 4.335315 TCCCACAATATAAGAGCGCTTTTG 59.665 41.667 22.35 15.36 35.56 2.44
5025 7214 4.335315 CCCACAATATAAGAGCGCTTTTGA 59.665 41.667 22.35 11.00 35.56 2.69
5026 7215 5.266242 CCACAATATAAGAGCGCTTTTGAC 58.734 41.667 22.35 4.04 35.56 3.18
5027 7216 5.163764 CCACAATATAAGAGCGCTTTTGACA 60.164 40.000 22.35 8.10 35.56 3.58
5028 7217 5.734498 CACAATATAAGAGCGCTTTTGACAC 59.266 40.000 22.35 2.46 35.56 3.67
5029 7218 5.643777 ACAATATAAGAGCGCTTTTGACACT 59.356 36.000 22.35 5.03 35.56 3.55
5030 7219 6.816640 ACAATATAAGAGCGCTTTTGACACTA 59.183 34.615 22.35 2.21 35.56 2.74
5031 7220 7.010552 ACAATATAAGAGCGCTTTTGACACTAG 59.989 37.037 22.35 9.05 35.56 2.57
5032 7221 2.821991 AGAGCGCTTTTGACACTAGT 57.178 45.000 13.26 0.00 0.00 2.57
5033 7222 2.408050 AGAGCGCTTTTGACACTAGTG 58.592 47.619 21.44 21.44 0.00 2.74
5034 7223 4.500887 TAAGAGCGCTTTTGACACTAGTGT 60.501 41.667 28.27 28.27 39.93 3.55
5035 7224 3.005472 AGAGCGCTTTTGACACTAGTGTA 59.995 43.478 27.98 11.50 45.05 2.90
5036 7225 3.318017 AGCGCTTTTGACACTAGTGTAG 58.682 45.455 27.98 21.29 45.05 2.74
5037 7226 3.057734 GCGCTTTTGACACTAGTGTAGT 58.942 45.455 27.98 6.32 45.05 2.73
5065 7254 9.719279 TTAAAAACGCTTTTATATTATGGGACG 57.281 29.630 4.69 0.00 36.97 4.79
5066 7255 5.934935 AACGCTTTTATATTATGGGACGG 57.065 39.130 0.00 0.00 0.00 4.79
5067 7256 5.217978 ACGCTTTTATATTATGGGACGGA 57.782 39.130 0.00 0.00 0.00 4.69
5068 7257 5.235516 ACGCTTTTATATTATGGGACGGAG 58.764 41.667 0.00 0.00 0.00 4.63
5069 7258 4.630069 CGCTTTTATATTATGGGACGGAGG 59.370 45.833 0.00 0.00 0.00 4.30
5070 7259 4.941873 GCTTTTATATTATGGGACGGAGGG 59.058 45.833 0.00 0.00 0.00 4.30
5071 7260 5.280317 GCTTTTATATTATGGGACGGAGGGA 60.280 44.000 0.00 0.00 0.00 4.20
5072 7261 6.368779 TTTTATATTATGGGACGGAGGGAG 57.631 41.667 0.00 0.00 0.00 4.30
5076 7265 1.229131 TATGGGACGGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
5080 7269 1.688627 GGGACGGAGGGAGTAGTCAAT 60.689 57.143 0.00 0.00 35.49 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
153 154 2.525055 TCAACGTGCTTCAAGTTTTGC 58.475 42.857 0.00 0.00 34.21 3.68
292 293 2.599281 TTGAGGGGAGCACGACGA 60.599 61.111 0.00 0.00 0.00 4.20
546 560 7.468922 AAAAGAAGCAATCAAAAAGCAGTAC 57.531 32.000 0.00 0.00 0.00 2.73
631 647 4.877823 TGTCATTCGAAGAGCAATGCTTAT 59.122 37.500 9.91 0.56 39.88 1.73
642 658 5.183331 AGCTTACAGTACTGTCATTCGAAGA 59.817 40.000 31.11 8.50 43.74 2.87
691 707 1.109296 CTTCCGAAACAAACGCGTTG 58.891 50.000 27.34 20.73 43.43 4.10
692 708 1.008329 TCTTCCGAAACAAACGCGTT 58.992 45.000 20.79 20.79 0.00 4.84
693 709 1.008329 TTCTTCCGAAACAAACGCGT 58.992 45.000 5.58 5.58 0.00 6.01
694 710 1.969256 CATTCTTCCGAAACAAACGCG 59.031 47.619 3.53 3.53 31.91 6.01
695 711 2.287368 ACCATTCTTCCGAAACAAACGC 60.287 45.455 0.00 0.00 31.91 4.84
696 712 3.002862 TGACCATTCTTCCGAAACAAACG 59.997 43.478 0.00 0.00 31.91 3.60
697 713 4.287720 GTGACCATTCTTCCGAAACAAAC 58.712 43.478 0.00 0.00 31.91 2.93
698 714 3.002862 CGTGACCATTCTTCCGAAACAAA 59.997 43.478 0.00 0.00 31.91 2.83
699 715 2.546368 CGTGACCATTCTTCCGAAACAA 59.454 45.455 0.00 0.00 31.91 2.83
700 716 2.139917 CGTGACCATTCTTCCGAAACA 58.860 47.619 0.00 0.00 31.91 2.83
701 717 1.463444 CCGTGACCATTCTTCCGAAAC 59.537 52.381 0.00 0.00 31.91 2.78
702 718 1.071071 ACCGTGACCATTCTTCCGAAA 59.929 47.619 0.00 0.00 31.91 3.46
703 719 0.682852 ACCGTGACCATTCTTCCGAA 59.317 50.000 0.00 0.00 0.00 4.30
704 720 0.682852 AACCGTGACCATTCTTCCGA 59.317 50.000 0.00 0.00 0.00 4.55
705 721 1.463444 GAAACCGTGACCATTCTTCCG 59.537 52.381 0.00 0.00 0.00 4.30
706 722 1.810755 GGAAACCGTGACCATTCTTCC 59.189 52.381 0.00 0.00 0.00 3.46
707 723 1.463444 CGGAAACCGTGACCATTCTTC 59.537 52.381 1.80 0.00 42.73 2.87
708 724 1.519408 CGGAAACCGTGACCATTCTT 58.481 50.000 1.80 0.00 42.73 2.52
709 725 3.226884 CGGAAACCGTGACCATTCT 57.773 52.632 1.80 0.00 42.73 2.40
720 736 1.084289 AAGCGCAGTAATCGGAAACC 58.916 50.000 11.47 0.00 0.00 3.27
721 737 2.415512 AGAAAGCGCAGTAATCGGAAAC 59.584 45.455 11.47 0.00 0.00 2.78
722 738 2.415168 CAGAAAGCGCAGTAATCGGAAA 59.585 45.455 11.47 0.00 0.00 3.13
723 739 1.999735 CAGAAAGCGCAGTAATCGGAA 59.000 47.619 11.47 0.00 0.00 4.30
724 740 1.203758 TCAGAAAGCGCAGTAATCGGA 59.796 47.619 11.47 3.45 0.00 4.55
725 741 1.640428 TCAGAAAGCGCAGTAATCGG 58.360 50.000 11.47 0.88 0.00 4.18
726 742 3.408150 GTTTCAGAAAGCGCAGTAATCG 58.592 45.455 11.47 0.00 0.00 3.34
727 743 3.408150 CGTTTCAGAAAGCGCAGTAATC 58.592 45.455 11.47 0.00 32.36 1.75
728 744 2.159627 CCGTTTCAGAAAGCGCAGTAAT 59.840 45.455 11.47 0.00 37.72 1.89
729 745 1.529438 CCGTTTCAGAAAGCGCAGTAA 59.471 47.619 11.47 0.00 37.72 2.24
730 746 1.144969 CCGTTTCAGAAAGCGCAGTA 58.855 50.000 11.47 0.00 37.72 2.74
731 747 1.941812 CCGTTTCAGAAAGCGCAGT 59.058 52.632 11.47 0.00 37.72 4.40
732 748 1.441016 GCCGTTTCAGAAAGCGCAG 60.441 57.895 11.47 0.00 37.72 5.18
733 749 2.183504 TGCCGTTTCAGAAAGCGCA 61.184 52.632 11.47 11.26 37.72 6.09
734 750 1.725973 GTGCCGTTTCAGAAAGCGC 60.726 57.895 0.00 0.00 37.72 5.92
735 751 1.082104 GGTGCCGTTTCAGAAAGCG 60.082 57.895 0.00 3.66 38.64 4.68
736 752 1.285950 GGGTGCCGTTTCAGAAAGC 59.714 57.895 0.00 0.00 0.00 3.51
737 753 0.593128 CTGGGTGCCGTTTCAGAAAG 59.407 55.000 0.00 0.00 0.00 2.62
738 754 1.452145 GCTGGGTGCCGTTTCAGAAA 61.452 55.000 0.00 0.00 35.15 2.52
739 755 1.896660 GCTGGGTGCCGTTTCAGAA 60.897 57.895 0.00 0.00 35.15 3.02
740 756 2.281484 GCTGGGTGCCGTTTCAGA 60.281 61.111 0.00 0.00 35.15 3.27
741 757 3.726517 CGCTGGGTGCCGTTTCAG 61.727 66.667 0.00 0.00 38.78 3.02
742 758 4.555709 ACGCTGGGTGCCGTTTCA 62.556 61.111 0.00 0.00 38.78 2.69
743 759 2.841160 AAACGCTGGGTGCCGTTTC 61.841 57.895 5.45 0.00 41.05 2.78
744 760 2.831284 AAACGCTGGGTGCCGTTT 60.831 55.556 5.45 5.45 40.58 3.60
745 761 3.591835 CAAACGCTGGGTGCCGTT 61.592 61.111 0.00 0.00 39.00 4.44
761 777 2.067766 GAATACGTTGTTGGCGTACCA 58.932 47.619 0.00 0.00 45.64 3.25
762 778 1.394572 GGAATACGTTGTTGGCGTACC 59.605 52.381 0.00 0.00 45.64 3.34
763 779 1.059549 CGGAATACGTTGTTGGCGTAC 59.940 52.381 0.00 0.00 45.64 3.67
764 780 1.348276 CGGAATACGTTGTTGGCGTA 58.652 50.000 0.00 0.11 46.63 4.42
765 781 2.155665 CGGAATACGTTGTTGGCGT 58.844 52.632 0.00 0.00 45.11 5.68
793 809 7.797233 AGTTTGTGAACCTCCGTATCGGAAG 62.797 48.000 11.89 8.58 43.89 3.46
794 810 6.068555 AGTTTGTGAACCTCCGTATCGGAA 62.069 45.833 11.89 0.00 43.89 4.30
795 811 4.625816 AGTTTGTGAACCTCCGTATCGGA 61.626 47.826 10.42 10.42 44.29 4.55
796 812 2.353406 AGTTTGTGAACCTCCGTATCGG 60.353 50.000 1.45 1.45 41.56 4.18
797 813 2.921754 GAGTTTGTGAACCTCCGTATCG 59.078 50.000 0.00 0.00 36.39 2.92
798 814 2.921754 CGAGTTTGTGAACCTCCGTATC 59.078 50.000 0.00 0.00 36.39 2.24
799 815 2.559668 TCGAGTTTGTGAACCTCCGTAT 59.440 45.455 0.00 0.00 36.39 3.06
800 816 1.955778 TCGAGTTTGTGAACCTCCGTA 59.044 47.619 0.00 0.00 36.39 4.02
801 817 0.748450 TCGAGTTTGTGAACCTCCGT 59.252 50.000 0.00 0.00 36.39 4.69
802 818 1.860676 TTCGAGTTTGTGAACCTCCG 58.139 50.000 0.00 0.00 36.39 4.63
803 819 3.375922 TGTTTTCGAGTTTGTGAACCTCC 59.624 43.478 0.00 0.00 36.39 4.30
804 820 4.340263 GTGTTTTCGAGTTTGTGAACCTC 58.660 43.478 0.00 0.00 36.39 3.85
805 821 3.128068 GGTGTTTTCGAGTTTGTGAACCT 59.872 43.478 0.00 0.00 36.39 3.50
806 822 3.431856 GGTGTTTTCGAGTTTGTGAACC 58.568 45.455 0.00 0.00 36.39 3.62
807 823 3.119779 TGGGTGTTTTCGAGTTTGTGAAC 60.120 43.478 0.00 0.00 35.97 3.18
808 824 3.082548 TGGGTGTTTTCGAGTTTGTGAA 58.917 40.909 0.00 0.00 0.00 3.18
809 825 2.680841 CTGGGTGTTTTCGAGTTTGTGA 59.319 45.455 0.00 0.00 0.00 3.58
810 826 2.680841 TCTGGGTGTTTTCGAGTTTGTG 59.319 45.455 0.00 0.00 0.00 3.33
811 827 2.993937 TCTGGGTGTTTTCGAGTTTGT 58.006 42.857 0.00 0.00 0.00 2.83
812 828 3.363970 CGATCTGGGTGTTTTCGAGTTTG 60.364 47.826 0.00 0.00 31.74 2.93
813 829 2.806244 CGATCTGGGTGTTTTCGAGTTT 59.194 45.455 0.00 0.00 31.74 2.66
814 830 2.036733 TCGATCTGGGTGTTTTCGAGTT 59.963 45.455 0.00 0.00 34.24 3.01
815 831 1.616865 TCGATCTGGGTGTTTTCGAGT 59.383 47.619 0.00 0.00 34.24 4.18
816 832 2.263077 CTCGATCTGGGTGTTTTCGAG 58.737 52.381 6.29 6.29 46.47 4.04
817 833 1.067142 CCTCGATCTGGGTGTTTTCGA 60.067 52.381 0.00 0.00 37.30 3.71
818 834 1.359848 CCTCGATCTGGGTGTTTTCG 58.640 55.000 0.00 0.00 0.00 3.46
819 835 1.087501 GCCTCGATCTGGGTGTTTTC 58.912 55.000 4.19 0.00 0.00 2.29
820 836 0.693049 AGCCTCGATCTGGGTGTTTT 59.307 50.000 5.67 0.00 33.62 2.43
821 837 0.036010 CAGCCTCGATCTGGGTGTTT 60.036 55.000 19.32 0.00 45.09 2.83
822 838 1.599047 CAGCCTCGATCTGGGTGTT 59.401 57.895 19.32 0.00 45.09 3.32
823 839 3.303189 CAGCCTCGATCTGGGTGT 58.697 61.111 19.32 0.81 45.09 4.16
825 841 1.967066 CTAATCAGCCTCGATCTGGGT 59.033 52.381 12.92 1.95 35.45 4.51
826 842 1.274728 CCTAATCAGCCTCGATCTGGG 59.725 57.143 12.92 0.00 32.63 4.45
827 843 2.242926 TCCTAATCAGCCTCGATCTGG 58.757 52.381 12.92 0.35 32.63 3.86
828 844 4.305769 CTTTCCTAATCAGCCTCGATCTG 58.694 47.826 8.14 8.14 0.00 2.90
829 845 3.244044 GCTTTCCTAATCAGCCTCGATCT 60.244 47.826 0.00 0.00 0.00 2.75
830 846 3.063485 GCTTTCCTAATCAGCCTCGATC 58.937 50.000 0.00 0.00 0.00 3.69
831 847 2.546795 CGCTTTCCTAATCAGCCTCGAT 60.547 50.000 0.00 0.00 0.00 3.59
832 848 1.202417 CGCTTTCCTAATCAGCCTCGA 60.202 52.381 0.00 0.00 0.00 4.04
833 849 1.212616 CGCTTTCCTAATCAGCCTCG 58.787 55.000 0.00 0.00 0.00 4.63
834 850 1.587547 CCGCTTTCCTAATCAGCCTC 58.412 55.000 0.00 0.00 0.00 4.70
835 851 0.181350 CCCGCTTTCCTAATCAGCCT 59.819 55.000 0.00 0.00 0.00 4.58
836 852 0.180406 TCCCGCTTTCCTAATCAGCC 59.820 55.000 0.00 0.00 0.00 4.85
837 853 1.134371 ACTCCCGCTTTCCTAATCAGC 60.134 52.381 0.00 0.00 0.00 4.26
838 854 2.555199 CACTCCCGCTTTCCTAATCAG 58.445 52.381 0.00 0.00 0.00 2.90
839 855 1.209504 CCACTCCCGCTTTCCTAATCA 59.790 52.381 0.00 0.00 0.00 2.57
840 856 1.475213 CCCACTCCCGCTTTCCTAATC 60.475 57.143 0.00 0.00 0.00 1.75
841 857 0.546598 CCCACTCCCGCTTTCCTAAT 59.453 55.000 0.00 0.00 0.00 1.73
842 858 1.559065 CCCCACTCCCGCTTTCCTAA 61.559 60.000 0.00 0.00 0.00 2.69
843 859 1.993391 CCCCACTCCCGCTTTCCTA 60.993 63.158 0.00 0.00 0.00 2.94
844 860 3.330720 CCCCACTCCCGCTTTCCT 61.331 66.667 0.00 0.00 0.00 3.36
857 873 4.860881 TTTGGTTTGGCCGCCCCA 62.861 61.111 7.03 4.17 43.51 4.96
858 874 4.308458 GTTTGGTTTGGCCGCCCC 62.308 66.667 7.03 1.09 41.21 5.80
859 875 3.541713 TGTTTGGTTTGGCCGCCC 61.542 61.111 7.03 0.00 41.21 6.13
860 876 2.279851 GTGTTTGGTTTGGCCGCC 60.280 61.111 1.04 1.04 41.21 6.13
861 877 0.943835 GATGTGTTTGGTTTGGCCGC 60.944 55.000 0.00 0.00 41.21 6.53
862 878 0.387202 TGATGTGTTTGGTTTGGCCG 59.613 50.000 0.00 0.00 41.21 6.13
863 879 1.864565 GTGATGTGTTTGGTTTGGCC 58.135 50.000 0.00 0.00 37.90 5.36
864 880 1.202359 ACGTGATGTGTTTGGTTTGGC 60.202 47.619 0.00 0.00 0.00 4.52
865 881 2.861462 ACGTGATGTGTTTGGTTTGG 57.139 45.000 0.00 0.00 0.00 3.28
866 882 4.610951 CGAATACGTGATGTGTTTGGTTTG 59.389 41.667 0.00 0.00 31.35 2.93
867 883 4.778904 CGAATACGTGATGTGTTTGGTTT 58.221 39.130 0.00 0.00 31.35 3.27
868 884 4.398549 CGAATACGTGATGTGTTTGGTT 57.601 40.909 0.00 0.00 31.35 3.67
882 898 6.956299 TCCCTTTTCTTCTTTACGAATACG 57.044 37.500 0.00 0.00 45.75 3.06
883 899 8.228464 CAGTTCCCTTTTCTTCTTTACGAATAC 58.772 37.037 0.00 0.00 0.00 1.89
884 900 7.389607 CCAGTTCCCTTTTCTTCTTTACGAATA 59.610 37.037 0.00 0.00 0.00 1.75
885 901 6.206829 CCAGTTCCCTTTTCTTCTTTACGAAT 59.793 38.462 0.00 0.00 0.00 3.34
886 902 5.529800 CCAGTTCCCTTTTCTTCTTTACGAA 59.470 40.000 0.00 0.00 0.00 3.85
887 903 5.061179 CCAGTTCCCTTTTCTTCTTTACGA 58.939 41.667 0.00 0.00 0.00 3.43
888 904 5.061179 TCCAGTTCCCTTTTCTTCTTTACG 58.939 41.667 0.00 0.00 0.00 3.18
889 905 5.048643 GCTCCAGTTCCCTTTTCTTCTTTAC 60.049 44.000 0.00 0.00 0.00 2.01
890 906 5.070685 GCTCCAGTTCCCTTTTCTTCTTTA 58.929 41.667 0.00 0.00 0.00 1.85
891 907 3.891977 GCTCCAGTTCCCTTTTCTTCTTT 59.108 43.478 0.00 0.00 0.00 2.52
892 908 3.139211 AGCTCCAGTTCCCTTTTCTTCTT 59.861 43.478 0.00 0.00 0.00 2.52
893 909 2.713708 AGCTCCAGTTCCCTTTTCTTCT 59.286 45.455 0.00 0.00 0.00 2.85
894 910 3.147553 AGCTCCAGTTCCCTTTTCTTC 57.852 47.619 0.00 0.00 0.00 2.87
895 911 3.491342 GAAGCTCCAGTTCCCTTTTCTT 58.509 45.455 0.00 0.00 0.00 2.52
896 912 2.224892 GGAAGCTCCAGTTCCCTTTTCT 60.225 50.000 0.00 0.00 38.03 2.52
897 913 2.163509 GGAAGCTCCAGTTCCCTTTTC 58.836 52.381 0.00 0.00 38.03 2.29
898 914 2.294449 GGAAGCTCCAGTTCCCTTTT 57.706 50.000 0.00 0.00 38.03 2.27
903 919 1.120530 TATCGGGAAGCTCCAGTTCC 58.879 55.000 0.00 0.00 42.57 3.62
904 920 1.202545 GGTATCGGGAAGCTCCAGTTC 60.203 57.143 0.00 0.00 38.64 3.01
905 921 0.831307 GGTATCGGGAAGCTCCAGTT 59.169 55.000 0.00 0.00 38.64 3.16
906 922 0.032017 AGGTATCGGGAAGCTCCAGT 60.032 55.000 0.00 0.00 38.64 4.00
907 923 1.123928 AAGGTATCGGGAAGCTCCAG 58.876 55.000 0.00 0.00 38.64 3.86
908 924 2.433239 GTTAAGGTATCGGGAAGCTCCA 59.567 50.000 0.00 0.00 38.64 3.86
909 925 2.224233 GGTTAAGGTATCGGGAAGCTCC 60.224 54.545 0.00 0.00 35.23 4.70
910 926 2.545322 CGGTTAAGGTATCGGGAAGCTC 60.545 54.545 0.00 0.00 0.00 4.09
911 927 1.411612 CGGTTAAGGTATCGGGAAGCT 59.588 52.381 0.00 0.00 0.00 3.74
912 928 1.410153 TCGGTTAAGGTATCGGGAAGC 59.590 52.381 0.00 0.00 0.00 3.86
913 929 3.382546 TCTTCGGTTAAGGTATCGGGAAG 59.617 47.826 0.00 0.00 35.75 3.46
914 930 3.131046 GTCTTCGGTTAAGGTATCGGGAA 59.869 47.826 0.00 0.00 35.75 3.97
915 931 2.689983 GTCTTCGGTTAAGGTATCGGGA 59.310 50.000 0.00 0.00 35.75 5.14
916 932 2.428171 TGTCTTCGGTTAAGGTATCGGG 59.572 50.000 0.00 0.00 35.75 5.14
917 933 3.788333 TGTCTTCGGTTAAGGTATCGG 57.212 47.619 0.00 0.00 35.75 4.18
918 934 5.689068 GGTAATGTCTTCGGTTAAGGTATCG 59.311 44.000 0.00 0.00 35.75 2.92
919 935 6.700520 CAGGTAATGTCTTCGGTTAAGGTATC 59.299 42.308 0.00 0.00 35.75 2.24
920 936 6.381994 TCAGGTAATGTCTTCGGTTAAGGTAT 59.618 38.462 0.00 0.00 35.75 2.73
921 937 5.716228 TCAGGTAATGTCTTCGGTTAAGGTA 59.284 40.000 0.00 0.00 35.75 3.08
922 938 4.529377 TCAGGTAATGTCTTCGGTTAAGGT 59.471 41.667 0.00 0.00 35.75 3.50
923 939 5.080969 TCAGGTAATGTCTTCGGTTAAGG 57.919 43.478 0.00 0.00 35.75 2.69
924 940 5.105473 TCCTCAGGTAATGTCTTCGGTTAAG 60.105 44.000 0.00 0.00 36.45 1.85
925 941 4.773674 TCCTCAGGTAATGTCTTCGGTTAA 59.226 41.667 0.00 0.00 0.00 2.01
926 942 4.159135 GTCCTCAGGTAATGTCTTCGGTTA 59.841 45.833 0.00 0.00 0.00 2.85
927 943 3.056035 GTCCTCAGGTAATGTCTTCGGTT 60.056 47.826 0.00 0.00 0.00 4.44
928 944 2.496470 GTCCTCAGGTAATGTCTTCGGT 59.504 50.000 0.00 0.00 0.00 4.69
929 945 2.479730 CGTCCTCAGGTAATGTCTTCGG 60.480 54.545 0.00 0.00 0.00 4.30
930 946 2.422479 TCGTCCTCAGGTAATGTCTTCG 59.578 50.000 0.00 0.00 0.00 3.79
931 947 4.174762 GTTCGTCCTCAGGTAATGTCTTC 58.825 47.826 0.00 0.00 0.00 2.87
932 948 3.056035 GGTTCGTCCTCAGGTAATGTCTT 60.056 47.826 0.00 0.00 0.00 3.01
933 949 2.496470 GGTTCGTCCTCAGGTAATGTCT 59.504 50.000 0.00 0.00 0.00 3.41
934 950 2.232941 TGGTTCGTCCTCAGGTAATGTC 59.767 50.000 0.00 0.00 37.07 3.06
935 951 2.253610 TGGTTCGTCCTCAGGTAATGT 58.746 47.619 0.00 0.00 37.07 2.71
936 952 3.328382 TTGGTTCGTCCTCAGGTAATG 57.672 47.619 0.00 0.00 37.07 1.90
937 953 3.671716 GTTTGGTTCGTCCTCAGGTAAT 58.328 45.455 0.00 0.00 37.07 1.89
938 954 2.546373 CGTTTGGTTCGTCCTCAGGTAA 60.546 50.000 0.00 0.00 37.07 2.85
939 955 1.000060 CGTTTGGTTCGTCCTCAGGTA 60.000 52.381 0.00 0.00 37.07 3.08
940 956 0.249741 CGTTTGGTTCGTCCTCAGGT 60.250 55.000 0.00 0.00 37.07 4.00
941 957 1.566018 GCGTTTGGTTCGTCCTCAGG 61.566 60.000 0.00 0.00 37.07 3.86
942 958 1.860078 GCGTTTGGTTCGTCCTCAG 59.140 57.895 1.80 0.00 37.07 3.35
943 959 1.952133 CGCGTTTGGTTCGTCCTCA 60.952 57.895 0.00 0.00 37.07 3.86
944 960 1.883725 GACGCGTTTGGTTCGTCCTC 61.884 60.000 15.53 0.00 44.62 3.71
945 961 1.952635 GACGCGTTTGGTTCGTCCT 60.953 57.895 15.53 0.00 44.62 3.85
946 962 2.547798 GACGCGTTTGGTTCGTCC 59.452 61.111 15.53 0.00 44.62 4.79
947 963 1.611592 ATCGACGCGTTTGGTTCGTC 61.612 55.000 15.53 0.00 46.23 4.20
948 964 0.387112 TATCGACGCGTTTGGTTCGT 60.387 50.000 15.53 4.78 39.33 3.85
949 965 0.709467 TTATCGACGCGTTTGGTTCG 59.291 50.000 15.53 11.77 0.00 3.95
950 966 2.093152 ACATTATCGACGCGTTTGGTTC 59.907 45.455 15.53 0.00 0.00 3.62
951 967 2.070783 ACATTATCGACGCGTTTGGTT 58.929 42.857 15.53 3.98 0.00 3.67
952 968 1.657094 GACATTATCGACGCGTTTGGT 59.343 47.619 15.53 8.50 0.00 3.67
953 969 1.924524 AGACATTATCGACGCGTTTGG 59.075 47.619 15.53 6.36 0.00 3.28
954 970 4.737598 CTTAGACATTATCGACGCGTTTG 58.262 43.478 15.53 9.97 0.00 2.93
955 971 3.242248 GCTTAGACATTATCGACGCGTTT 59.758 43.478 15.53 4.15 0.00 3.60
956 972 2.787680 GCTTAGACATTATCGACGCGTT 59.212 45.455 15.53 0.00 0.00 4.84
957 973 2.033049 AGCTTAGACATTATCGACGCGT 59.967 45.455 13.85 13.85 0.00 6.01
958 974 2.651701 AGCTTAGACATTATCGACGCG 58.348 47.619 3.53 3.53 0.00 6.01
959 975 3.891324 AGAGCTTAGACATTATCGACGC 58.109 45.455 0.00 0.00 0.00 5.19
960 976 9.053135 GTATTAAGAGCTTAGACATTATCGACG 57.947 37.037 0.00 0.00 0.00 5.12
961 977 9.053135 CGTATTAAGAGCTTAGACATTATCGAC 57.947 37.037 0.00 0.00 0.00 4.20
962 978 8.781196 ACGTATTAAGAGCTTAGACATTATCGA 58.219 33.333 0.00 0.00 0.00 3.59
963 979 8.951954 ACGTATTAAGAGCTTAGACATTATCG 57.048 34.615 0.00 0.00 0.00 2.92
965 981 8.979574 GCAACGTATTAAGAGCTTAGACATTAT 58.020 33.333 0.00 0.00 0.00 1.28
990 1006 1.881973 TCAGAAGACATTGTTGCCTGC 59.118 47.619 0.00 0.00 0.00 4.85
999 1015 5.046087 TGTGACCTCATGATCAGAAGACATT 60.046 40.000 0.09 0.00 0.00 2.71
1009 1025 2.012673 GGCAAGTGTGACCTCATGATC 58.987 52.381 0.00 0.00 0.00 2.92
1014 1030 0.473755 ACATGGCAAGTGTGACCTCA 59.526 50.000 0.00 0.00 0.00 3.86
1023 1039 3.119029 GCAACATTATGGACATGGCAAGT 60.119 43.478 0.00 0.00 0.00 3.16
1026 1042 2.427812 CAGCAACATTATGGACATGGCA 59.572 45.455 0.00 0.00 0.00 4.92
1039 1055 1.342174 CCCAAAAGACAGCAGCAACAT 59.658 47.619 0.00 0.00 0.00 2.71
1058 1074 1.172812 AACCGCTGAGCAAAGAACCC 61.173 55.000 4.88 0.00 0.00 4.11
1119 1135 0.647410 CGTAAGTGATCGCCTGCTTG 59.353 55.000 1.76 0.00 0.00 4.01
1170 1186 0.827507 ATCGGCAAAAGGTGGTGCTT 60.828 50.000 0.00 0.00 40.70 3.91
1228 1244 1.376424 CGAGGTGCAGCTCCACAAT 60.376 57.895 33.75 5.78 37.46 2.71
1283 1299 3.842007 TTAGGAACGTGAGGTTTCCAA 57.158 42.857 4.61 0.00 39.50 3.53
1323 1339 2.030562 CGGCCAGACAGACCGTTT 59.969 61.111 2.24 0.00 42.01 3.60
1347 1363 3.636231 TGGAGGCGGTTCAGTGGG 61.636 66.667 0.00 0.00 0.00 4.61
1358 1374 0.807496 GATTTGCTGTCTGTGGAGGC 59.193 55.000 0.00 0.00 0.00 4.70
1370 1386 0.678048 GCCGAGGTCAAGGATTTGCT 60.678 55.000 0.00 0.00 34.21 3.91
1453 1469 8.120538 TCCTACAAAAGAGTTATAGGAGAGGAA 58.879 37.037 0.00 0.00 37.17 3.36
1454 1470 7.649715 TCCTACAAAAGAGTTATAGGAGAGGA 58.350 38.462 0.00 0.00 37.17 3.71
1488 1504 0.119358 AGAGGAGGCCTAGTTTGGGT 59.881 55.000 4.42 0.00 31.76 4.51
1506 1522 4.369182 AGCGTAAATCGGATAAGTTGGAG 58.631 43.478 0.00 0.00 40.26 3.86
1517 1533 3.529634 TTGTGTTGAAGCGTAAATCGG 57.470 42.857 0.00 0.00 40.26 4.18
1536 1552 4.461198 GGATGGTTCCGGTGAGATTATTT 58.539 43.478 0.00 0.00 30.72 1.40
1607 1623 2.176247 ACCTCCCGACAGGTGATTAT 57.824 50.000 4.57 0.00 45.80 1.28
1660 1676 3.717294 ACCTAAGGCCAGCCACCG 61.717 66.667 12.03 0.00 38.92 4.94
1680 1696 4.767409 GGGAATCCACCAATTAGCCTATTC 59.233 45.833 0.09 0.00 0.00 1.75
1710 1726 6.739331 AGGGAATTAGACAGATTGAGTAGG 57.261 41.667 0.00 0.00 0.00 3.18
1756 1772 4.017126 GGCAACCTGTTTCCTAGCTTATT 58.983 43.478 0.00 0.00 0.00 1.40
1796 1812 2.371510 AGCCATTGGAGATTAGAGAGGC 59.628 50.000 6.95 0.00 39.82 4.70
1871 1887 4.567747 GCTCCAGTCTTTCCATCCCTAAAA 60.568 45.833 0.00 0.00 0.00 1.52
1888 1904 5.649395 TGAAATTGTTATTCTCCAGCTCCAG 59.351 40.000 0.00 0.00 0.00 3.86
1911 1927 6.211515 CAAAGAAGAAGGAATTTCACCAGTG 58.788 40.000 0.00 0.00 38.31 3.66
1945 1961 7.093771 CCCAAGATTCAAATAGTACAGGCTTTT 60.094 37.037 0.00 0.00 0.00 2.27
1947 1963 5.888161 CCCAAGATTCAAATAGTACAGGCTT 59.112 40.000 0.00 0.00 0.00 4.35
1949 1965 4.580580 CCCCAAGATTCAAATAGTACAGGC 59.419 45.833 0.00 0.00 0.00 4.85
1951 1967 6.001449 TCCCCCAAGATTCAAATAGTACAG 57.999 41.667 0.00 0.00 0.00 2.74
1954 1970 5.163343 CGTCTCCCCCAAGATTCAAATAGTA 60.163 44.000 0.00 0.00 0.00 1.82
1962 1978 0.178301 GACCGTCTCCCCCAAGATTC 59.822 60.000 0.00 0.00 0.00 2.52
1975 1991 2.348591 CGTCTTTTGCTTCAAGACCGTC 60.349 50.000 14.03 0.00 45.07 4.79
1978 1994 1.335051 GGCGTCTTTTGCTTCAAGACC 60.335 52.381 14.03 9.00 45.07 3.85
1979 1995 1.335051 GGGCGTCTTTTGCTTCAAGAC 60.335 52.381 11.21 11.21 44.62 3.01
1999 2015 4.022068 TGCATTAAAGAACTCCCAGCTTTG 60.022 41.667 0.00 0.00 34.12 2.77
2027 2043 7.592885 AGGATATTTAGACCGCTACAGTTTA 57.407 36.000 0.00 0.00 0.00 2.01
2076 2092 4.080015 CCTATTGAACCTGGTATTGTCCCA 60.080 45.833 0.00 0.00 0.00 4.37
2079 2095 6.884836 AGTTTCCTATTGAACCTGGTATTGTC 59.115 38.462 0.00 0.00 31.05 3.18
2313 2329 5.568023 CGTCAACTGAGTTAGGTTTCCCATA 60.568 44.000 0.00 0.00 0.00 2.74
2398 2414 9.050601 GCTAAGATCTAACAATATGAGCTGTTT 57.949 33.333 0.00 0.00 37.05 2.83
2408 2424 9.894783 GAGTGTTATCGCTAAGATCTAACAATA 57.105 33.333 6.55 0.00 38.68 1.90
2415 2431 5.133941 TGGAGAGTGTTATCGCTAAGATCT 58.866 41.667 0.00 0.00 40.66 2.75
2485 2501 6.371809 AAGCTTGTTTGATGAAAGACGTAA 57.628 33.333 0.00 0.00 0.00 3.18
2487 2503 4.900635 AAGCTTGTTTGATGAAAGACGT 57.099 36.364 0.00 0.00 0.00 4.34
2597 2613 3.491792 GCTCTTTAGGTTCCCGAGAGATG 60.492 52.174 13.89 0.00 34.39 2.90
2659 2675 4.762251 GTCAGCTAAAACTTCAGGAATGGT 59.238 41.667 0.00 0.00 0.00 3.55
2784 2800 2.423185 TCCTCCGCATAGTGCAAAATTG 59.577 45.455 2.63 0.00 45.36 2.32
2790 2806 1.517361 CACTCCTCCGCATAGTGCA 59.483 57.895 2.63 0.00 45.36 4.57
2951 2969 5.859205 TGATATGTATGCTCTGTGTGACT 57.141 39.130 0.00 0.00 0.00 3.41
2968 2986 4.408921 TCCACCAAAGGAAGTCGATGATAT 59.591 41.667 0.00 0.00 33.93 1.63
3004 3022 7.021196 GCTCGAGCTAGATCATAGTAAGAAAG 58.979 42.308 29.88 0.00 38.21 2.62
3295 3320 7.961351 TCATGTAACCATTTGTCCAAATTTCT 58.039 30.769 2.56 0.00 38.84 2.52
3297 3322 8.970859 TTTCATGTAACCATTTGTCCAAATTT 57.029 26.923 2.56 0.00 38.84 1.82
3572 5468 1.734465 CCTTCAATCCGACTGAGTTGC 59.266 52.381 0.00 0.00 0.00 4.17
3597 5493 7.506261 CCGTTACCTGGAGCTATATATCCTATT 59.494 40.741 0.00 0.00 36.50 1.73
3749 5653 4.501915 CCAAAGCTGAAAACATCACCACAT 60.502 41.667 0.00 0.00 33.47 3.21
3751 5655 3.068024 TCCAAAGCTGAAAACATCACCAC 59.932 43.478 0.00 0.00 33.47 4.16
3817 5721 0.743097 GAGGCCATCCTGAAACATGC 59.257 55.000 5.01 0.00 44.46 4.06
3879 5783 7.303261 TGGAGATGAACATCGATTATACGTAC 58.697 38.462 0.00 0.00 42.48 3.67
3914 5818 2.221169 GCTCCATGAATGTATCCGCAA 58.779 47.619 0.00 0.00 0.00 4.85
3980 5884 3.315191 ACGTGCAAGAAAGTGCTAATTGT 59.685 39.130 6.65 0.00 45.17 2.71
4150 6054 8.171840 CGATCTTATTTTCACTTCAAGAGGAAC 58.828 37.037 0.00 0.00 0.00 3.62
4267 6178 4.640647 TGTCAGATTCAGCACTATACTCGT 59.359 41.667 0.00 0.00 0.00 4.18
4279 6190 8.618677 ACAATATGCTAATTGTGTCAGATTCAG 58.381 33.333 14.04 0.00 45.90 3.02
4307 6218 3.715638 ATGCCCACTCATCTCCATATG 57.284 47.619 0.00 0.00 0.00 1.78
4394 6305 1.370657 GCCGATCGCTAGGAAGTCG 60.371 63.158 10.32 0.00 0.00 4.18
4417 6328 0.968901 TGGACTAGATCGCCCGTTGT 60.969 55.000 0.00 0.00 0.00 3.32
4420 6331 0.467474 TGATGGACTAGATCGCCCGT 60.467 55.000 0.00 0.00 0.00 5.28
4423 6334 2.101582 AGTTGTGATGGACTAGATCGCC 59.898 50.000 0.00 0.00 30.61 5.54
4432 6343 2.609459 CGGCTGATTAGTTGTGATGGAC 59.391 50.000 0.00 0.00 0.00 4.02
4437 6348 3.244078 ACTTGTCGGCTGATTAGTTGTGA 60.244 43.478 0.00 0.00 0.00 3.58
4438 6349 3.067106 ACTTGTCGGCTGATTAGTTGTG 58.933 45.455 0.00 0.00 0.00 3.33
4439 6350 3.006967 AGACTTGTCGGCTGATTAGTTGT 59.993 43.478 12.21 1.42 0.00 3.32
4480 6391 2.029844 GTGCGCTGGAAGTCTCACC 61.030 63.158 9.73 0.00 35.30 4.02
4481 6392 1.300931 TGTGCGCTGGAAGTCTCAC 60.301 57.895 9.73 0.00 35.30 3.51
4517 6428 2.437359 CGCCTCCCTCTTGCCTTG 60.437 66.667 0.00 0.00 0.00 3.61
4576 6493 2.631457 AATTAGAGGCGGGCCCCCTA 62.631 60.000 26.68 15.10 36.58 3.53
4583 6500 2.552373 GGGATGGTTAATTAGAGGCGGG 60.552 54.545 0.00 0.00 0.00 6.13
4585 6502 3.771577 AGGGATGGTTAATTAGAGGCG 57.228 47.619 0.00 0.00 0.00 5.52
4586 6503 9.755122 ATTAATTAGGGATGGTTAATTAGAGGC 57.245 33.333 0.00 0.00 34.80 4.70
4595 6512 6.503560 ACGTGGATTAATTAGGGATGGTTA 57.496 37.500 0.00 0.00 0.00 2.85
4596 6513 5.382664 ACGTGGATTAATTAGGGATGGTT 57.617 39.130 0.00 0.00 0.00 3.67
4597 6514 6.100714 ACTTACGTGGATTAATTAGGGATGGT 59.899 38.462 0.00 0.00 0.00 3.55
4600 6517 9.774413 CTTAACTTACGTGGATTAATTAGGGAT 57.226 33.333 0.00 0.00 0.00 3.85
4602 6519 7.041576 GGCTTAACTTACGTGGATTAATTAGGG 60.042 40.741 0.00 0.00 0.00 3.53
4608 6797 5.797051 AGTGGCTTAACTTACGTGGATTAA 58.203 37.500 0.00 0.00 0.00 1.40
4620 6809 6.323739 TCTTCAATTTGGAAAGTGGCTTAACT 59.676 34.615 0.17 0.00 34.95 2.24
4645 6834 0.529119 AACGCTCGTTTTCCGACAGT 60.529 50.000 1.37 0.00 41.60 3.55
4692 6881 8.158132 TGAACTCTATCACTAGATACTAGTGGG 58.842 40.741 27.37 20.24 43.67 4.61
4702 6891 9.645059 CAAACAAGAATGAACTCTATCACTAGA 57.355 33.333 0.00 0.00 32.96 2.43
4703 6892 9.645059 TCAAACAAGAATGAACTCTATCACTAG 57.355 33.333 0.00 0.00 30.82 2.57
4705 6894 9.160496 GATCAAACAAGAATGAACTCTATCACT 57.840 33.333 0.00 0.00 30.82 3.41
4727 6916 6.381133 TCTGGATAGCAACTTAAGACAGATCA 59.619 38.462 10.09 0.00 0.00 2.92
4728 6917 6.810911 TCTGGATAGCAACTTAAGACAGATC 58.189 40.000 10.09 5.25 0.00 2.75
4775 6964 6.291377 TGGCCACTTTGTATTGCAAAATTAA 58.709 32.000 0.00 0.00 45.35 1.40
4944 7133 1.624312 TGGTTGGTACGTTCATGGCTA 59.376 47.619 0.00 0.00 0.00 3.93
4958 7147 2.364970 TCCTGTTTTTGCAGATGGTTGG 59.635 45.455 0.00 0.00 38.70 3.77
4974 7163 7.418712 CGGAGGGAGTATTTAACTATTTCCTGT 60.419 40.741 0.42 0.00 39.07 4.00
4983 7172 3.036819 GGGACGGAGGGAGTATTTAACT 58.963 50.000 0.00 0.00 42.80 2.24
4990 7179 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59
4991 7180 0.042131 TATTGTGGGACGGAGGGAGT 59.958 55.000 0.00 0.00 0.00 3.85
4992 7181 1.424638 ATATTGTGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
4993 7182 2.779429 TATATTGTGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
4994 7183 2.969950 TCTTATATTGTGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
4995 7184 3.555168 GCTCTTATATTGTGGGACGGAGG 60.555 52.174 0.00 0.00 0.00 4.30
4996 7185 3.654414 GCTCTTATATTGTGGGACGGAG 58.346 50.000 0.00 0.00 0.00 4.63
4997 7186 2.035449 CGCTCTTATATTGTGGGACGGA 59.965 50.000 0.00 0.00 0.00 4.69
4998 7187 2.404215 CGCTCTTATATTGTGGGACGG 58.596 52.381 0.00 0.00 0.00 4.79
4999 7188 1.792949 GCGCTCTTATATTGTGGGACG 59.207 52.381 0.00 0.00 0.00 4.79
5000 7189 3.113260 AGCGCTCTTATATTGTGGGAC 57.887 47.619 2.64 0.00 0.00 4.46
5001 7190 3.838244 AAGCGCTCTTATATTGTGGGA 57.162 42.857 12.06 0.00 0.00 4.37
5002 7191 4.335315 TCAAAAGCGCTCTTATATTGTGGG 59.665 41.667 12.06 0.00 31.02 4.61
5003 7192 5.163764 TGTCAAAAGCGCTCTTATATTGTGG 60.164 40.000 12.06 0.00 31.02 4.17
5004 7193 5.734498 GTGTCAAAAGCGCTCTTATATTGTG 59.266 40.000 12.06 0.00 31.02 3.33
5005 7194 5.643777 AGTGTCAAAAGCGCTCTTATATTGT 59.356 36.000 12.06 0.00 31.02 2.71
5006 7195 6.111768 AGTGTCAAAAGCGCTCTTATATTG 57.888 37.500 12.06 9.77 31.02 1.90
5007 7196 7.010552 CACTAGTGTCAAAAGCGCTCTTATATT 59.989 37.037 12.06 0.00 31.02 1.28
5008 7197 6.477033 CACTAGTGTCAAAAGCGCTCTTATAT 59.523 38.462 12.06 0.00 31.02 0.86
5009 7198 5.805486 CACTAGTGTCAAAAGCGCTCTTATA 59.195 40.000 12.06 0.00 31.02 0.98
5010 7199 4.627467 CACTAGTGTCAAAAGCGCTCTTAT 59.373 41.667 12.06 0.00 31.02 1.73
5011 7200 3.987868 CACTAGTGTCAAAAGCGCTCTTA 59.012 43.478 12.06 0.00 31.02 2.10
5012 7201 2.802816 CACTAGTGTCAAAAGCGCTCTT 59.197 45.455 12.06 0.00 0.00 2.85
5013 7202 2.224066 ACACTAGTGTCAAAAGCGCTCT 60.224 45.455 22.95 3.67 40.24 4.09
5014 7203 2.135933 ACACTAGTGTCAAAAGCGCTC 58.864 47.619 22.95 0.00 40.24 5.03
5015 7204 2.240493 ACACTAGTGTCAAAAGCGCT 57.760 45.000 22.95 2.64 40.24 5.92
5016 7205 3.057734 ACTACACTAGTGTCAAAAGCGC 58.942 45.455 31.11 0.00 43.74 5.92
5026 7215 7.906527 AAAAGCGTTTTTAACACTACACTAGTG 59.093 33.333 21.44 21.44 45.79 2.74
5027 7216 7.543947 AAAGCGTTTTTAACACTACACTAGT 57.456 32.000 0.00 0.00 40.28 2.57
5039 7228 9.719279 CGTCCCATAATATAAAAGCGTTTTTAA 57.281 29.630 19.04 10.34 40.91 1.52
5040 7229 8.344098 CCGTCCCATAATATAAAAGCGTTTTTA 58.656 33.333 17.75 17.75 41.56 1.52
5041 7230 7.067251 TCCGTCCCATAATATAAAAGCGTTTTT 59.933 33.333 14.50 14.50 39.69 1.94
5042 7231 6.543100 TCCGTCCCATAATATAAAAGCGTTTT 59.457 34.615 2.19 1.29 36.67 2.43
5043 7232 6.056884 TCCGTCCCATAATATAAAAGCGTTT 58.943 36.000 2.53 2.53 0.00 3.60
5044 7233 5.613329 TCCGTCCCATAATATAAAAGCGTT 58.387 37.500 0.00 0.00 0.00 4.84
5045 7234 5.217978 TCCGTCCCATAATATAAAAGCGT 57.782 39.130 0.00 0.00 0.00 5.07
5046 7235 4.630069 CCTCCGTCCCATAATATAAAAGCG 59.370 45.833 0.00 0.00 0.00 4.68
5047 7236 4.941873 CCCTCCGTCCCATAATATAAAAGC 59.058 45.833 0.00 0.00 0.00 3.51
5048 7237 6.013639 ACTCCCTCCGTCCCATAATATAAAAG 60.014 42.308 0.00 0.00 0.00 2.27
5049 7238 5.847817 ACTCCCTCCGTCCCATAATATAAAA 59.152 40.000 0.00 0.00 0.00 1.52
5050 7239 5.408824 ACTCCCTCCGTCCCATAATATAAA 58.591 41.667 0.00 0.00 0.00 1.40
5051 7240 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
5052 7241 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
5053 7242 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
5054 7243 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
5055 7244 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
5056 7245 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
5057 7246 1.144503 GACTACTCCCTCCGTCCCATA 59.855 57.143 0.00 0.00 0.00 2.74
5058 7247 0.106116 GACTACTCCCTCCGTCCCAT 60.106 60.000 0.00 0.00 0.00 4.00
5059 7248 1.305623 GACTACTCCCTCCGTCCCA 59.694 63.158 0.00 0.00 0.00 4.37
5060 7249 0.324091 TTGACTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
5061 7250 1.777941 ATTGACTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
5062 7251 4.996788 TTTATTGACTACTCCCTCCGTC 57.003 45.455 0.00 0.00 0.00 4.79
5063 7252 4.715297 ACATTTATTGACTACTCCCTCCGT 59.285 41.667 0.00 0.00 0.00 4.69
5064 7253 5.277857 ACATTTATTGACTACTCCCTCCG 57.722 43.478 0.00 0.00 0.00 4.63
5065 7254 7.736893 ACATACATTTATTGACTACTCCCTCC 58.263 38.462 0.00 0.00 0.00 4.30
5068 7257 9.490379 CCTAACATACATTTATTGACTACTCCC 57.510 37.037 0.00 0.00 0.00 4.30
5069 7258 8.989980 GCCTAACATACATTTATTGACTACTCC 58.010 37.037 0.00 0.00 0.00 3.85
5070 7259 8.989980 GGCCTAACATACATTTATTGACTACTC 58.010 37.037 0.00 0.00 0.00 2.59
5071 7260 7.656137 CGGCCTAACATACATTTATTGACTACT 59.344 37.037 0.00 0.00 0.00 2.57
5072 7261 7.654520 TCGGCCTAACATACATTTATTGACTAC 59.345 37.037 0.00 0.00 0.00 2.73
5076 7265 5.464057 CGTCGGCCTAACATACATTTATTGA 59.536 40.000 0.00 0.00 0.00 2.57
5080 7269 3.125316 GCGTCGGCCTAACATACATTTA 58.875 45.455 0.00 0.00 0.00 1.40
5112 7301 9.548208 GCAGTTCAGTTTAGACTTTGATTAATC 57.452 33.333 8.60 8.60 32.54 1.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.