Multiple sequence alignment - TraesCS1A01G332900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G332900 chr1A 100.000 6368 0 0 1 6368 521268768 521275135 0.000000e+00 11760.0
1 TraesCS1A01G332900 chr1A 95.833 144 6 0 4720 4863 521273380 521273523 3.840000e-57 233.0
2 TraesCS1A01G332900 chr1A 95.833 144 6 0 4613 4756 521273487 521273630 3.840000e-57 233.0
3 TraesCS1A01G332900 chr1A 79.503 161 23 7 6206 6361 313266895 313266740 8.730000e-19 106.0
4 TraesCS1A01G332900 chr1A 93.023 43 2 1 3307 3348 521272008 521272050 1.920000e-05 62.1
5 TraesCS1A01G332900 chr1A 93.023 43 2 1 3241 3283 521272074 521272115 1.920000e-05 62.1
6 TraesCS1A01G332900 chr1D 96.556 2555 57 13 2383 4911 426163294 426165843 0.000000e+00 4202.0
7 TraesCS1A01G332900 chr1D 87.031 1280 64 39 1166 2383 426161866 426163105 0.000000e+00 1351.0
8 TraesCS1A01G332900 chr1D 90.680 912 38 20 4932 5819 426165828 426166716 0.000000e+00 1170.0
9 TraesCS1A01G332900 chr1D 91.379 464 26 10 731 1183 426161381 426161841 1.950000e-174 623.0
10 TraesCS1A01G332900 chr1D 92.339 248 18 1 146 393 425684779 425685025 1.020000e-92 351.0
11 TraesCS1A01G332900 chr1D 94.444 144 8 0 4720 4863 426165545 426165688 8.310000e-54 222.0
12 TraesCS1A01G332900 chr1D 91.667 144 12 0 4613 4756 426165652 426165795 3.890000e-47 200.0
13 TraesCS1A01G332900 chr1D 90.071 141 10 4 2383 2519 426163136 426163276 5.070000e-41 180.0
14 TraesCS1A01G332900 chr1D 87.302 126 14 1 1 126 425677671 425677794 6.660000e-30 143.0
15 TraesCS1A01G332900 chr1D 85.315 143 15 5 23 164 473781928 473782065 6.660000e-30 143.0
16 TraesCS1A01G332900 chr1D 82.517 143 16 6 6219 6358 234066355 234066491 4.030000e-22 117.0
17 TraesCS1A01G332900 chr1D 93.103 58 3 1 600 657 426160780 426160836 4.090000e-12 84.2
18 TraesCS1A01G332900 chr1D 95.349 43 2 0 3241 3283 426164235 426164277 1.150000e-07 69.4
19 TraesCS1A01G332900 chr1D 91.489 47 3 1 4679 4724 426165859 426165905 5.330000e-06 63.9
20 TraesCS1A01G332900 chr1D 88.889 45 2 1 3307 3348 426164167 426164211 1.200000e-02 52.8
21 TraesCS1A01G332900 chr1B 96.232 2548 68 15 2383 4911 575719276 575721814 0.000000e+00 4148.0
22 TraesCS1A01G332900 chr1B 86.617 1076 62 23 626 1638 575717250 575718306 0.000000e+00 1114.0
23 TraesCS1A01G332900 chr1B 90.980 765 38 13 1637 2383 575718336 575719087 0.000000e+00 1002.0
24 TraesCS1A01G332900 chr1B 90.207 725 33 16 5117 5819 575722077 575722785 0.000000e+00 911.0
25 TraesCS1A01G332900 chr1B 89.157 498 49 5 14 509 575716576 575717070 3.260000e-172 616.0
26 TraesCS1A01G332900 chr1B 91.667 144 10 2 4613 4756 575721622 575721763 1.400000e-46 198.0
27 TraesCS1A01G332900 chr1B 90.972 144 12 1 4720 4863 575721515 575721657 6.520000e-45 193.0
28 TraesCS1A01G332900 chr1B 89.362 141 11 4 2383 2519 575719118 575719258 2.360000e-39 174.0
29 TraesCS1A01G332900 chr1B 93.162 117 8 0 519 635 575717116 575717232 8.490000e-39 172.0
30 TraesCS1A01G332900 chr1B 95.349 43 1 1 3241 3283 575720213 575720254 4.120000e-07 67.6
31 TraesCS1A01G332900 chr6D 86.342 637 70 14 3321 3944 458995281 458995913 0.000000e+00 678.0
32 TraesCS1A01G332900 chr6D 84.615 663 71 14 3986 4628 458995904 458996555 1.170000e-176 630.0
33 TraesCS1A01G332900 chr6D 85.864 573 46 10 1781 2337 458993964 458994517 1.540000e-160 577.0
34 TraesCS1A01G332900 chr6D 79.223 669 96 14 2516 3182 458994519 458995146 5.900000e-115 425.0
35 TraesCS1A01G332900 chr6D 82.573 241 27 9 1270 1502 458993036 458993269 1.400000e-46 198.0
36 TraesCS1A01G332900 chr6D 88.148 135 11 2 5117 5251 458996705 458996834 8.550000e-34 156.0
37 TraesCS1A01G332900 chr6D 89.831 59 2 2 1569 1627 458993310 458993364 8.860000e-09 73.1
38 TraesCS1A01G332900 chr6B 79.775 445 83 6 17 460 19034283 19034721 3.710000e-82 316.0
39 TraesCS1A01G332900 chr2B 79.318 440 79 11 23 460 98736380 98735951 1.340000e-76 298.0
40 TraesCS1A01G332900 chr7B 81.180 356 52 9 24 377 52506903 52507245 8.140000e-69 272.0
41 TraesCS1A01G332900 chr7B 83.088 136 12 9 6234 6366 506724963 506725090 5.220000e-21 113.0
42 TraesCS1A01G332900 chr4D 79.540 391 65 8 23 404 467189912 467189528 1.360000e-66 265.0
43 TraesCS1A01G332900 chr5B 80.108 372 59 7 23 386 487224397 487224761 4.900000e-66 263.0
44 TraesCS1A01G332900 chr2A 81.481 162 18 10 6206 6361 4949162 4949317 8.670000e-24 122.0
45 TraesCS1A01G332900 chr7A 82.639 144 15 7 6222 6361 657150496 657150359 1.120000e-22 119.0
46 TraesCS1A01G332900 chr7A 81.757 148 17 7 6222 6365 698593881 698593740 1.450000e-21 115.0
47 TraesCS1A01G332900 chr3D 82.517 143 17 6 6222 6361 537660024 537660161 1.120000e-22 119.0
48 TraesCS1A01G332900 chr5D 82.517 143 15 9 6222 6361 38708044 38707909 4.030000e-22 117.0
49 TraesCS1A01G332900 chr3B 79.878 164 19 8 6206 6361 813903827 813903984 2.430000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G332900 chr1A 521268768 521275135 6367 False 2470.040000 11760 95.5424 1 6368 5 chr1A.!!$F1 6367
1 TraesCS1A01G332900 chr1D 426160780 426166716 5936 False 747.118182 4202 91.8780 600 5819 11 chr1D.!!$F5 5219
2 TraesCS1A01G332900 chr1B 575716576 575722785 6209 False 859.560000 4148 91.3705 14 5819 10 chr1B.!!$F1 5805
3 TraesCS1A01G332900 chr6D 458993036 458996834 3798 False 391.014286 678 85.2280 1270 5251 7 chr6D.!!$F1 3981

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
902 1463 0.034380 GCTTAAACCCTCCCACCTCC 60.034 60.000 0.00 0.0 0.00 4.30 F
1538 2169 0.107017 CCATCTTCCCGTCATTGCCT 60.107 55.000 0.00 0.0 0.00 4.75 F
1558 2189 1.100463 TTGCTTCGTTGCTTGCTGGA 61.100 50.000 4.36 0.0 0.00 3.86 F
3176 4474 0.665068 TGTTGTGCTACAGTACGCGG 60.665 55.000 12.47 0.0 33.15 6.46 F
3310 4630 1.332375 GTGCTCGTTTGCTTGGTTGTA 59.668 47.619 0.00 0.0 0.00 2.41 F
5010 6468 0.182299 TGTTGTGGACTGTCATGGCA 59.818 50.000 10.38 0.0 0.00 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1827 2917 0.309922 CTGCACAGACAAAGCACAGG 59.690 55.000 0.00 0.00 34.13 4.00 R
2341 3446 1.363280 TCACTACTGGATGGGTGGGTA 59.637 52.381 0.00 0.00 0.00 3.69 R
3291 4611 1.669604 TACAACCAAGCAAACGAGCA 58.330 45.000 0.00 0.00 36.85 4.26 R
4578 6033 0.511221 GTTCTTTGCTACGCTTGCGA 59.489 50.000 22.03 4.66 0.00 5.10 R
5135 6688 1.271325 TGCACTACTGGGATTGGTGTG 60.271 52.381 0.00 0.00 0.00 3.82 R
5902 7488 0.104855 CCGCCACTGCTTCTATGCTA 59.895 55.000 0.00 0.00 34.43 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 57 6.710744 AGTCTAAACACACTCCACTTTATTGG 59.289 38.462 0.00 0.00 38.10 3.16
69 71 8.573035 TCCACTTTATTGGTTATTGAACAAGTC 58.427 33.333 0.00 0.00 37.93 3.01
70 72 8.576442 CCACTTTATTGGTTATTGAACAAGTCT 58.424 33.333 0.00 0.00 37.29 3.24
80 82 9.930693 GGTTATTGAACAAGTCTATAGGGATAG 57.069 37.037 0.00 0.00 37.29 2.08
86 88 9.877222 TGAACAAGTCTATAGGGATAGAATGTA 57.123 33.333 0.00 1.03 44.54 2.29
114 116 5.977635 TGGAGTATTAAGGAGACACACATG 58.022 41.667 0.00 0.00 0.00 3.21
116 118 5.128827 GGAGTATTAAGGAGACACACATGGA 59.871 44.000 0.00 0.00 0.00 3.41
118 120 3.334583 TTAAGGAGACACACATGGAGC 57.665 47.619 0.00 0.00 0.00 4.70
129 131 3.441572 CACACATGGAGCCCTAAAGAAAG 59.558 47.826 0.00 0.00 0.00 2.62
151 153 5.767670 AGGCCTAGAGTATGTTTAGTGAGA 58.232 41.667 1.29 0.00 0.00 3.27
159 161 7.484975 AGAGTATGTTTAGTGAGACTATGTGC 58.515 38.462 0.00 0.00 29.64 4.57
162 164 5.073311 TGTTTAGTGAGACTATGTGCCTC 57.927 43.478 0.00 0.00 29.64 4.70
170 172 4.956075 TGAGACTATGTGCCTCAGTATTGA 59.044 41.667 0.00 0.00 33.50 2.57
173 175 6.520272 AGACTATGTGCCTCAGTATTGATTC 58.480 40.000 0.00 0.00 31.68 2.52
176 178 4.142609 TGTGCCTCAGTATTGATTCCTC 57.857 45.455 0.00 0.00 31.68 3.71
179 181 3.782523 TGCCTCAGTATTGATTCCTCCTT 59.217 43.478 0.00 0.00 31.68 3.36
284 286 6.402118 CCGTATTTCTGTGAATGTCGTTGATT 60.402 38.462 0.00 0.00 0.00 2.57
294 296 5.178623 TGAATGTCGTTGATTACACCTTGAC 59.821 40.000 0.00 0.00 0.00 3.18
296 298 4.055360 TGTCGTTGATTACACCTTGACAG 58.945 43.478 0.00 0.00 31.99 3.51
297 299 3.064207 TCGTTGATTACACCTTGACAGC 58.936 45.455 0.00 0.00 0.00 4.40
298 300 2.159627 CGTTGATTACACCTTGACAGCC 59.840 50.000 0.00 0.00 0.00 4.85
299 301 3.412386 GTTGATTACACCTTGACAGCCT 58.588 45.455 0.00 0.00 0.00 4.58
301 303 2.637382 TGATTACACCTTGACAGCCTCA 59.363 45.455 0.00 0.00 0.00 3.86
314 317 2.459442 GCCTCAAGCTAGCTGCACG 61.459 63.158 20.16 7.68 45.94 5.34
318 321 0.389037 TCAAGCTAGCTGCACGTCTG 60.389 55.000 20.16 11.06 45.94 3.51
348 351 1.354040 ATCGAAAGCAAGTGAGAGCG 58.646 50.000 0.00 0.00 35.48 5.03
395 398 1.561769 ATGCTGGGTCGGTCATTCCA 61.562 55.000 0.00 0.00 35.57 3.53
407 410 5.357032 GTCGGTCATTCCAGGACATTTTATT 59.643 40.000 0.00 0.00 37.00 1.40
431 434 2.287668 CGAGGAACCTAGATAGTTGCCG 60.288 54.545 0.00 0.00 36.32 5.69
440 443 0.179081 GATAGTTGCCGGTGGAGTCC 60.179 60.000 1.90 0.73 0.00 3.85
449 452 2.584391 GGTGGAGTCCCTGCGAACT 61.584 63.158 6.74 0.00 0.00 3.01
450 453 1.374758 GTGGAGTCCCTGCGAACTG 60.375 63.158 6.74 0.00 0.00 3.16
467 470 1.692519 ACTGCGTTGTAAGAACCCTCT 59.307 47.619 0.00 0.00 0.00 3.69
471 474 2.547218 GCGTTGTAAGAACCCTCTGTCA 60.547 50.000 0.00 0.00 30.03 3.58
498 501 1.664965 GACACGGCACTGTCCACTC 60.665 63.158 2.27 0.00 35.44 3.51
509 512 3.003689 CACTGTCCACTCGAATTTTTGCT 59.996 43.478 0.00 0.00 0.00 3.91
510 513 3.003689 ACTGTCCACTCGAATTTTTGCTG 59.996 43.478 0.00 0.00 0.00 4.41
511 514 2.293122 TGTCCACTCGAATTTTTGCTGG 59.707 45.455 0.00 0.00 0.00 4.85
512 515 1.885887 TCCACTCGAATTTTTGCTGGG 59.114 47.619 0.00 0.00 0.00 4.45
514 517 0.240945 ACTCGAATTTTTGCTGGGCG 59.759 50.000 0.00 0.00 0.00 6.13
515 518 0.456653 CTCGAATTTTTGCTGGGCGG 60.457 55.000 0.00 0.00 0.00 6.13
516 519 1.445926 CGAATTTTTGCTGGGCGGG 60.446 57.895 0.00 0.00 0.00 6.13
517 520 1.872197 CGAATTTTTGCTGGGCGGGA 61.872 55.000 0.00 0.00 0.00 5.14
532 571 1.748122 GGGATGTGTGAGCAGCCAG 60.748 63.158 2.79 0.00 45.97 4.85
536 575 1.030488 ATGTGTGAGCAGCCAGATGC 61.030 55.000 0.00 0.00 46.88 3.91
554 593 1.737236 TGCTGTATCATCGGTTTGCAC 59.263 47.619 0.00 0.00 0.00 4.57
565 604 0.235926 GGTTTGCACGTCTGAAGCTC 59.764 55.000 0.00 0.00 0.00 4.09
668 1219 7.118971 GCAACCATTTTGCAGGTTATATCAAAA 59.881 33.333 7.70 0.00 45.93 2.44
669 1220 8.997323 CAACCATTTTGCAGGTTATATCAAAAA 58.003 29.630 7.70 0.00 45.93 1.94
723 1276 8.681486 TCAAAATGGACCTGTCTATTATCATG 57.319 34.615 8.97 7.01 39.41 3.07
726 1279 8.859236 AAATGGACCTGTCTATTATCATGATG 57.141 34.615 18.72 1.29 39.41 3.07
728 1281 6.997655 TGGACCTGTCTATTATCATGATGAC 58.002 40.000 18.72 16.03 0.00 3.06
759 1312 1.807814 CTAGGTAAGGCCCATCTGGT 58.192 55.000 0.00 0.00 38.26 4.00
760 1313 2.127708 CTAGGTAAGGCCCATCTGGTT 58.872 52.381 0.00 0.00 38.26 3.67
826 1381 3.179939 GAGTTCCGGCTTCGTCGC 61.180 66.667 0.00 0.00 0.00 5.19
840 1395 4.760047 TCGCTGCCCTCCGCTTTC 62.760 66.667 0.00 0.00 38.78 2.62
842 1397 4.416738 GCTGCCCTCCGCTTTCCT 62.417 66.667 0.00 0.00 38.78 3.36
846 1401 4.840005 CCCTCCGCTTTCCTCCGC 62.840 72.222 0.00 0.00 0.00 5.54
854 1409 2.668212 TTTCCTCCGCCGCAGTTG 60.668 61.111 0.00 0.00 0.00 3.16
855 1410 3.171828 TTTCCTCCGCCGCAGTTGA 62.172 57.895 0.00 0.00 0.00 3.18
856 1411 3.589654 TTCCTCCGCCGCAGTTGAG 62.590 63.158 0.00 0.00 0.00 3.02
858 1413 2.185350 CTCCGCCGCAGTTGAGAT 59.815 61.111 0.00 0.00 0.00 2.75
859 1414 1.880340 CTCCGCCGCAGTTGAGATC 60.880 63.158 0.00 0.00 0.00 2.75
860 1415 3.257561 CCGCCGCAGTTGAGATCG 61.258 66.667 0.00 0.00 0.00 3.69
868 1423 1.651138 GCAGTTGAGATCGAGTTCGTG 59.349 52.381 1.07 0.00 40.80 4.35
896 1457 0.322187 TTGCTCGCTTAAACCCTCCC 60.322 55.000 0.00 0.00 0.00 4.30
897 1458 1.298667 GCTCGCTTAAACCCTCCCA 59.701 57.895 0.00 0.00 0.00 4.37
898 1459 1.025113 GCTCGCTTAAACCCTCCCAC 61.025 60.000 0.00 0.00 0.00 4.61
899 1460 0.392595 CTCGCTTAAACCCTCCCACC 60.393 60.000 0.00 0.00 0.00 4.61
900 1461 0.838987 TCGCTTAAACCCTCCCACCT 60.839 55.000 0.00 0.00 0.00 4.00
901 1462 0.392595 CGCTTAAACCCTCCCACCTC 60.393 60.000 0.00 0.00 0.00 3.85
902 1463 0.034380 GCTTAAACCCTCCCACCTCC 60.034 60.000 0.00 0.00 0.00 4.30
970 1537 6.202331 TCCCCTTCTTCCTTTTCTTTCTTTT 58.798 36.000 0.00 0.00 0.00 2.27
985 1552 3.844562 TTTTCCCCCAAGCCAGCCC 62.845 63.158 0.00 0.00 0.00 5.19
1398 2029 1.028905 TTGTTCCTTCCCGTTTGCTG 58.971 50.000 0.00 0.00 0.00 4.41
1493 2124 2.579207 CGGAGGACGCTTCAGAATTA 57.421 50.000 0.00 0.00 34.82 1.40
1521 2152 1.599606 AATTAACCAATGCCGCGCCA 61.600 50.000 0.00 0.00 0.00 5.69
1536 2167 1.729881 GCCATCTTCCCGTCATTGC 59.270 57.895 0.00 0.00 0.00 3.56
1538 2169 0.107017 CCATCTTCCCGTCATTGCCT 60.107 55.000 0.00 0.00 0.00 4.75
1558 2189 1.100463 TTGCTTCGTTGCTTGCTGGA 61.100 50.000 4.36 0.00 0.00 3.86
1559 2190 1.208614 GCTTCGTTGCTTGCTGGAG 59.791 57.895 0.00 0.00 0.00 3.86
1560 2191 1.510480 GCTTCGTTGCTTGCTGGAGT 61.510 55.000 0.00 0.00 0.00 3.85
1578 2209 3.554544 GGAGTAGTAATTTCGCTAGGGGC 60.555 52.174 6.99 0.00 37.64 5.80
1580 2211 3.453353 AGTAGTAATTTCGCTAGGGGCAA 59.547 43.478 6.99 1.10 41.91 4.52
1582 2213 4.699925 AGTAATTTCGCTAGGGGCAATA 57.300 40.909 6.99 0.00 41.91 1.90
1583 2214 5.242795 AGTAATTTCGCTAGGGGCAATAT 57.757 39.130 6.99 1.47 41.91 1.28
1630 2269 7.320443 TGGCAGCTCTGTTTATTGTAATAAG 57.680 36.000 0.00 0.00 32.87 1.73
1714 2384 2.154462 GTTCTGTCACAAGGTCCATGG 58.846 52.381 4.97 4.97 0.00 3.66
1770 2504 3.636300 CAGAAACAAATGGAGGTTGTGGA 59.364 43.478 0.00 0.00 39.14 4.02
1817 2907 7.241663 TGTTGTGTGTCAAACTATGTCTAAC 57.758 36.000 0.00 0.00 37.81 2.34
1839 2929 2.072298 CTAGAGTGCCTGTGCTTTGTC 58.928 52.381 0.00 0.00 38.71 3.18
1889 2979 4.929808 ACGAAACAGCTATGAAAGGTACAG 59.070 41.667 0.00 0.00 33.59 2.74
1899 2989 2.092968 TGAAAGGTACAGGCTATGGCAG 60.093 50.000 2.58 0.00 40.87 4.85
1919 3009 6.437162 TGGCAGCTTCCTTCTTTTATTATTGT 59.563 34.615 3.45 0.00 0.00 2.71
1920 3010 7.039082 TGGCAGCTTCCTTCTTTTATTATTGTT 60.039 33.333 3.45 0.00 0.00 2.83
1921 3011 8.466798 GGCAGCTTCCTTCTTTTATTATTGTTA 58.533 33.333 0.00 0.00 0.00 2.41
2113 3203 4.237724 TGATTGAACAGTGATCTGACGAC 58.762 43.478 0.00 0.00 43.76 4.34
2128 3218 9.000486 TGATCTGACGACCATTATAGTAAGTAG 58.000 37.037 0.00 0.00 0.00 2.57
2341 3446 5.990996 GGTTCGCTACTATGACTAGAGTAGT 59.009 44.000 14.52 12.19 45.90 2.73
2394 3531 2.816499 TAAGGGGGCCTTGGTGGGAT 62.816 60.000 0.84 0.00 44.44 3.85
2417 3554 7.201911 GGATGGGGTTGTAAAATCTTAGAATGG 60.202 40.741 0.00 0.00 0.00 3.16
2422 3559 6.476706 GGTTGTAAAATCTTAGAATGGCATGC 59.523 38.462 9.90 9.90 0.00 4.06
2438 3733 3.058160 GCTTGTGCAGCGGATGGT 61.058 61.111 0.00 0.00 39.29 3.55
2502 3798 5.048013 AGCTCCAGTATACCTTTTTGTTTGC 60.048 40.000 0.00 0.00 0.00 3.68
2509 3805 3.712016 ACCTTTTTGTTTGCCACCTTT 57.288 38.095 0.00 0.00 0.00 3.11
2732 4030 1.237285 ACCCGCATCAGACAAACTGC 61.237 55.000 0.00 0.00 45.38 4.40
2900 4198 6.779049 CCAATCTTAGGATTTGATGGGAATGA 59.221 38.462 0.00 0.00 39.87 2.57
2902 4200 6.581388 TCTTAGGATTTGATGGGAATGAGT 57.419 37.500 0.00 0.00 0.00 3.41
3176 4474 0.665068 TGTTGTGCTACAGTACGCGG 60.665 55.000 12.47 0.00 33.15 6.46
3202 4500 5.193679 ACAGTAGGTCTTCCCATAATTTGC 58.806 41.667 0.00 0.00 34.66 3.68
3291 4611 2.307496 TTTCCATTGCCACATCCAGT 57.693 45.000 0.00 0.00 0.00 4.00
3310 4630 1.332375 GTGCTCGTTTGCTTGGTTGTA 59.668 47.619 0.00 0.00 0.00 2.41
3353 4775 3.278574 TGAGATTTCCATTGCCTTACGG 58.721 45.455 0.00 0.00 0.00 4.02
3582 5006 3.995705 GCTTTTCTGCAACATATGGCAAA 59.004 39.130 7.80 3.33 39.93 3.68
3711 5136 4.464951 CACTTGTAGTATGTGGACCCTGTA 59.535 45.833 0.00 0.00 32.40 2.74
4359 5810 7.939039 TCTGATTCCATTTCTTGAGTGTAAGTT 59.061 33.333 0.00 0.00 0.00 2.66
4578 6033 4.213482 GGTCATGACGTTGCTAAAGAGTTT 59.787 41.667 19.33 0.00 0.00 2.66
4581 6036 2.220133 TGACGTTGCTAAAGAGTTTCGC 59.780 45.455 0.00 0.00 32.53 4.70
4653 6108 6.551385 CAGGATGCCTGTCATTTAGAATAC 57.449 41.667 5.31 0.00 45.82 1.89
4664 6119 9.774742 CTGTCATTTAGAATACTTTAGGTTTGC 57.225 33.333 0.00 0.00 0.00 3.68
4677 6132 6.040054 ACTTTAGGTTTGCCGTCTTTACATTT 59.960 34.615 0.00 0.00 40.50 2.32
4680 6135 4.216902 AGGTTTGCCGTCTTTACATTTACC 59.783 41.667 0.00 0.00 40.50 2.85
4787 6242 3.561503 GTTTGCCGTCTTTACATTGACC 58.438 45.455 0.00 0.00 0.00 4.02
4913 6371 9.871238 AACGTGATATATTGGTATAGATGTTCC 57.129 33.333 0.00 0.00 0.00 3.62
4914 6372 8.188799 ACGTGATATATTGGTATAGATGTTCCG 58.811 37.037 0.00 0.00 0.00 4.30
4915 6373 8.188799 CGTGATATATTGGTATAGATGTTCCGT 58.811 37.037 0.00 0.00 0.00 4.69
4916 6374 9.871238 GTGATATATTGGTATAGATGTTCCGTT 57.129 33.333 0.00 0.00 0.00 4.44
4921 6379 7.931578 ATTGGTATAGATGTTCCGTTTCAAA 57.068 32.000 0.00 0.00 0.00 2.69
4922 6380 7.747155 TTGGTATAGATGTTCCGTTTCAAAA 57.253 32.000 0.00 0.00 0.00 2.44
4923 6381 7.747155 TGGTATAGATGTTCCGTTTCAAAAA 57.253 32.000 0.00 0.00 0.00 1.94
4983 6441 4.593206 ACATGAGTGGACCTCTCTTTTGTA 59.407 41.667 21.19 3.79 41.11 2.41
5010 6468 0.182299 TGTTGTGGACTGTCATGGCA 59.818 50.000 10.38 0.00 0.00 4.92
5046 6504 1.734163 AGTTGGTACGCCTTATGCAC 58.266 50.000 0.00 0.00 41.33 4.57
5074 6532 8.037758 AGTTGATCTGAATTTCGAAGTACAGAT 58.962 33.333 26.89 26.89 44.24 2.90
5126 6679 8.233190 GCAATTATGTAGTAGAATCATGCTTCC 58.767 37.037 5.68 0.00 0.00 3.46
5135 6688 4.268359 AGAATCATGCTTCCTTGAGAACC 58.732 43.478 5.68 0.00 0.00 3.62
5204 6760 5.475273 TCAGATTTCAAGCTTAGAATGCG 57.525 39.130 0.00 0.00 35.28 4.73
5335 6900 2.095059 CCATCTTACAGGCACAAGCAAC 60.095 50.000 0.00 0.00 44.61 4.17
5336 6901 2.340210 TCTTACAGGCACAAGCAACA 57.660 45.000 0.00 0.00 44.61 3.33
5348 6913 2.031683 ACAAGCAACAGAAGCAACGTAC 59.968 45.455 0.00 0.00 0.00 3.67
5380 6945 1.071385 GGCGGTGATGGATCTGATCTT 59.929 52.381 16.61 5.61 0.00 2.40
5409 6974 4.079253 GGACAAAGCTCCAAATTGACCTA 58.921 43.478 8.69 0.00 36.43 3.08
5410 6975 4.082733 GGACAAAGCTCCAAATTGACCTAC 60.083 45.833 8.69 0.00 36.43 3.18
5411 6976 3.826729 ACAAAGCTCCAAATTGACCTACC 59.173 43.478 2.16 0.00 0.00 3.18
5412 6977 4.082125 CAAAGCTCCAAATTGACCTACCT 58.918 43.478 0.00 0.00 0.00 3.08
5453 7018 5.705609 TTTTTGTTGGAAGGAGAGCATAC 57.294 39.130 0.00 0.00 0.00 2.39
5464 7029 4.093472 GGAGAGCATACTGAGACTCCTA 57.907 50.000 0.00 0.00 40.20 2.94
5473 7039 2.502947 ACTGAGACTCCTATGCATTGCA 59.497 45.455 14.72 14.72 44.86 4.08
5499 7065 5.876357 TCTAGTCAAATGGCTTGGTAGTTT 58.124 37.500 0.00 0.00 35.56 2.66
5671 7238 3.319755 CACCAAGTTTGCCTTATGCTTG 58.680 45.455 0.00 0.00 42.00 4.01
5700 7267 1.086067 ACATGCGTTGAGATGAGGCG 61.086 55.000 0.00 0.00 0.00 5.52
5737 7304 2.079158 CGTGGTCATTGCATTCTCTGT 58.921 47.619 0.00 0.00 0.00 3.41
5738 7305 2.094894 CGTGGTCATTGCATTCTCTGTC 59.905 50.000 0.00 0.00 0.00 3.51
5739 7306 3.076621 GTGGTCATTGCATTCTCTGTCA 58.923 45.455 0.00 0.00 0.00 3.58
5740 7307 3.693085 GTGGTCATTGCATTCTCTGTCAT 59.307 43.478 0.00 0.00 0.00 3.06
5741 7308 3.943381 TGGTCATTGCATTCTCTGTCATC 59.057 43.478 0.00 0.00 0.00 2.92
5742 7309 3.002042 GGTCATTGCATTCTCTGTCATCG 59.998 47.826 0.00 0.00 0.00 3.84
5743 7310 3.620374 GTCATTGCATTCTCTGTCATCGT 59.380 43.478 0.00 0.00 0.00 3.73
5745 7312 1.362768 TGCATTCTCTGTCATCGTGC 58.637 50.000 0.00 0.00 0.00 5.34
5746 7313 1.338011 TGCATTCTCTGTCATCGTGCA 60.338 47.619 0.00 0.00 38.62 4.57
5747 7314 1.326852 GCATTCTCTGTCATCGTGCAG 59.673 52.381 0.00 0.00 0.00 4.41
5753 7338 3.443681 TCTCTGTCATCGTGCAGACATTA 59.556 43.478 6.94 0.00 43.18 1.90
5762 7347 2.282555 CGTGCAGACATTATCGACTTGG 59.717 50.000 0.00 0.00 0.00 3.61
5774 7359 9.396022 ACATTATCGACTTGGTGAGAAATAATT 57.604 29.630 0.00 0.00 0.00 1.40
5787 7372 9.758651 GGTGAGAAATAATTTAACAGTGGTTTT 57.241 29.630 0.00 0.00 38.45 2.43
5819 7405 3.005554 CGTCTCATCTGCACCAAATTCT 58.994 45.455 0.00 0.00 0.00 2.40
5820 7406 3.063180 CGTCTCATCTGCACCAAATTCTC 59.937 47.826 0.00 0.00 0.00 2.87
5821 7407 4.260170 GTCTCATCTGCACCAAATTCTCT 58.740 43.478 0.00 0.00 0.00 3.10
5822 7408 4.699257 GTCTCATCTGCACCAAATTCTCTT 59.301 41.667 0.00 0.00 0.00 2.85
5823 7409 5.877012 GTCTCATCTGCACCAAATTCTCTTA 59.123 40.000 0.00 0.00 0.00 2.10
5824 7410 6.541641 GTCTCATCTGCACCAAATTCTCTTAT 59.458 38.462 0.00 0.00 0.00 1.73
5825 7411 7.066766 GTCTCATCTGCACCAAATTCTCTTATT 59.933 37.037 0.00 0.00 0.00 1.40
5826 7412 7.613022 TCTCATCTGCACCAAATTCTCTTATTT 59.387 33.333 0.00 0.00 0.00 1.40
5827 7413 8.806429 TCATCTGCACCAAATTCTCTTATTTA 57.194 30.769 0.00 0.00 0.00 1.40
5828 7414 8.896744 TCATCTGCACCAAATTCTCTTATTTAG 58.103 33.333 0.00 0.00 0.00 1.85
5829 7415 8.680903 CATCTGCACCAAATTCTCTTATTTAGT 58.319 33.333 0.00 0.00 0.00 2.24
5830 7416 8.044060 TCTGCACCAAATTCTCTTATTTAGTG 57.956 34.615 0.00 0.00 38.96 2.74
5831 7417 7.121168 TCTGCACCAAATTCTCTTATTTAGTGG 59.879 37.037 8.81 0.00 37.50 4.00
5832 7418 6.036470 GCACCAAATTCTCTTATTTAGTGGC 58.964 40.000 8.81 0.00 37.50 5.01
5833 7419 6.350110 GCACCAAATTCTCTTATTTAGTGGCA 60.350 38.462 8.81 0.00 37.50 4.92
5834 7420 7.631377 GCACCAAATTCTCTTATTTAGTGGCAT 60.631 37.037 8.81 0.00 37.50 4.40
5835 7421 8.253113 CACCAAATTCTCTTATTTAGTGGCATT 58.747 33.333 0.00 0.00 35.13 3.56
5836 7422 8.470002 ACCAAATTCTCTTATTTAGTGGCATTC 58.530 33.333 0.00 0.00 0.00 2.67
5837 7423 8.689972 CCAAATTCTCTTATTTAGTGGCATTCT 58.310 33.333 0.00 0.00 0.00 2.40
5838 7424 9.727627 CAAATTCTCTTATTTAGTGGCATTCTC 57.272 33.333 0.00 0.00 0.00 2.87
5839 7425 7.721286 ATTCTCTTATTTAGTGGCATTCTCG 57.279 36.000 0.00 0.00 0.00 4.04
5840 7426 5.601662 TCTCTTATTTAGTGGCATTCTCGG 58.398 41.667 0.00 0.00 0.00 4.63
5841 7427 4.703897 TCTTATTTAGTGGCATTCTCGGG 58.296 43.478 0.00 0.00 0.00 5.14
5842 7428 4.163458 TCTTATTTAGTGGCATTCTCGGGT 59.837 41.667 0.00 0.00 0.00 5.28
5843 7429 2.871096 TTTAGTGGCATTCTCGGGTT 57.129 45.000 0.00 0.00 0.00 4.11
5844 7430 3.985019 TTTAGTGGCATTCTCGGGTTA 57.015 42.857 0.00 0.00 0.00 2.85
5845 7431 3.985019 TTAGTGGCATTCTCGGGTTAA 57.015 42.857 0.00 0.00 0.00 2.01
5846 7432 2.871096 AGTGGCATTCTCGGGTTAAA 57.129 45.000 0.00 0.00 0.00 1.52
5847 7433 3.366052 AGTGGCATTCTCGGGTTAAAT 57.634 42.857 0.00 0.00 0.00 1.40
5848 7434 3.697166 AGTGGCATTCTCGGGTTAAATT 58.303 40.909 0.00 0.00 0.00 1.82
5849 7435 4.086457 AGTGGCATTCTCGGGTTAAATTT 58.914 39.130 0.00 0.00 0.00 1.82
5850 7436 4.526650 AGTGGCATTCTCGGGTTAAATTTT 59.473 37.500 0.00 0.00 0.00 1.82
5851 7437 5.011635 AGTGGCATTCTCGGGTTAAATTTTT 59.988 36.000 0.00 0.00 0.00 1.94
5852 7438 5.347635 GTGGCATTCTCGGGTTAAATTTTTC 59.652 40.000 0.00 0.00 0.00 2.29
5853 7439 5.245075 TGGCATTCTCGGGTTAAATTTTTCT 59.755 36.000 0.00 0.00 0.00 2.52
5854 7440 6.163476 GGCATTCTCGGGTTAAATTTTTCTT 58.837 36.000 0.00 0.00 0.00 2.52
5855 7441 6.649141 GGCATTCTCGGGTTAAATTTTTCTTT 59.351 34.615 0.00 0.00 0.00 2.52
5856 7442 7.815549 GGCATTCTCGGGTTAAATTTTTCTTTA 59.184 33.333 0.00 0.00 0.00 1.85
5857 7443 9.198837 GCATTCTCGGGTTAAATTTTTCTTTAA 57.801 29.630 0.00 0.00 0.00 1.52
5862 7448 9.353999 CTCGGGTTAAATTTTTCTTTAATCAGG 57.646 33.333 0.00 0.00 34.69 3.86
5863 7449 8.308207 TCGGGTTAAATTTTTCTTTAATCAGGG 58.692 33.333 0.00 0.00 34.69 4.45
5864 7450 8.092068 CGGGTTAAATTTTTCTTTAATCAGGGT 58.908 33.333 0.00 0.00 34.69 4.34
5880 7466 3.713867 GGTACTCCCTCCCACTTCT 57.286 57.895 0.00 0.00 0.00 2.85
5881 7467 1.954035 GGTACTCCCTCCCACTTCTT 58.046 55.000 0.00 0.00 0.00 2.52
5882 7468 1.832366 GGTACTCCCTCCCACTTCTTC 59.168 57.143 0.00 0.00 0.00 2.87
5883 7469 1.832366 GTACTCCCTCCCACTTCTTCC 59.168 57.143 0.00 0.00 0.00 3.46
5884 7470 0.547954 ACTCCCTCCCACTTCTTCCC 60.548 60.000 0.00 0.00 0.00 3.97
5885 7471 1.229853 TCCCTCCCACTTCTTCCCC 60.230 63.158 0.00 0.00 0.00 4.81
5886 7472 1.541368 CCCTCCCACTTCTTCCCCA 60.541 63.158 0.00 0.00 0.00 4.96
5887 7473 1.140134 CCCTCCCACTTCTTCCCCAA 61.140 60.000 0.00 0.00 0.00 4.12
5888 7474 0.777446 CCTCCCACTTCTTCCCCAAA 59.223 55.000 0.00 0.00 0.00 3.28
5889 7475 1.359130 CCTCCCACTTCTTCCCCAAAT 59.641 52.381 0.00 0.00 0.00 2.32
5890 7476 2.621668 CCTCCCACTTCTTCCCCAAATC 60.622 54.545 0.00 0.00 0.00 2.17
5891 7477 2.310052 CTCCCACTTCTTCCCCAAATCT 59.690 50.000 0.00 0.00 0.00 2.40
5892 7478 2.721906 TCCCACTTCTTCCCCAAATCTT 59.278 45.455 0.00 0.00 0.00 2.40
5893 7479 3.920197 TCCCACTTCTTCCCCAAATCTTA 59.080 43.478 0.00 0.00 0.00 2.10
5894 7480 4.544152 TCCCACTTCTTCCCCAAATCTTAT 59.456 41.667 0.00 0.00 0.00 1.73
5895 7481 4.646492 CCCACTTCTTCCCCAAATCTTATG 59.354 45.833 0.00 0.00 0.00 1.90
5896 7482 4.098501 CCACTTCTTCCCCAAATCTTATGC 59.901 45.833 0.00 0.00 0.00 3.14
5897 7483 3.947834 ACTTCTTCCCCAAATCTTATGCG 59.052 43.478 0.00 0.00 0.00 4.73
5898 7484 3.644966 TCTTCCCCAAATCTTATGCGT 57.355 42.857 0.00 0.00 0.00 5.24
5899 7485 3.963129 TCTTCCCCAAATCTTATGCGTT 58.037 40.909 0.00 0.00 0.00 4.84
5900 7486 4.340617 TCTTCCCCAAATCTTATGCGTTT 58.659 39.130 0.00 0.00 0.00 3.60
5901 7487 4.398044 TCTTCCCCAAATCTTATGCGTTTC 59.602 41.667 0.00 0.00 0.00 2.78
5902 7488 3.963129 TCCCCAAATCTTATGCGTTTCT 58.037 40.909 0.00 0.00 0.00 2.52
5903 7489 5.105567 TCCCCAAATCTTATGCGTTTCTA 57.894 39.130 0.00 0.00 0.00 2.10
5904 7490 5.123227 TCCCCAAATCTTATGCGTTTCTAG 58.877 41.667 0.00 0.00 0.00 2.43
5905 7491 4.261197 CCCCAAATCTTATGCGTTTCTAGC 60.261 45.833 0.00 0.00 0.00 3.42
5919 7505 2.898729 TCTAGCATAGAAGCAGTGGC 57.101 50.000 0.00 0.00 46.47 5.01
5920 7506 1.067669 TCTAGCATAGAAGCAGTGGCG 59.932 52.381 0.00 0.00 46.47 5.69
5921 7507 1.871408 CTAGCATAGAAGCAGTGGCGG 60.871 57.143 0.00 0.00 42.77 6.13
5922 7508 4.168976 CTAGCATAGAAGCAGTGGCGGA 62.169 54.545 0.00 0.00 42.77 5.54
5923 7509 5.945447 CTAGCATAGAAGCAGTGGCGGAG 62.945 56.522 0.00 0.00 42.77 4.63
5940 7526 2.568623 GAGGCAGGAACTCCAGAAAA 57.431 50.000 0.00 0.00 34.60 2.29
5941 7527 3.078891 GAGGCAGGAACTCCAGAAAAT 57.921 47.619 0.00 0.00 34.60 1.82
5942 7528 3.013219 GAGGCAGGAACTCCAGAAAATC 58.987 50.000 0.00 0.00 34.60 2.17
5943 7529 1.740025 GGCAGGAACTCCAGAAAATCG 59.260 52.381 0.00 0.00 34.60 3.34
5944 7530 2.615493 GGCAGGAACTCCAGAAAATCGA 60.615 50.000 0.00 0.00 34.60 3.59
5945 7531 2.675348 GCAGGAACTCCAGAAAATCGAG 59.325 50.000 0.00 0.00 34.60 4.04
5946 7532 3.265791 CAGGAACTCCAGAAAATCGAGG 58.734 50.000 0.00 0.00 34.60 4.63
5947 7533 2.907042 AGGAACTCCAGAAAATCGAGGT 59.093 45.455 0.00 0.00 38.89 3.85
5948 7534 3.328050 AGGAACTCCAGAAAATCGAGGTT 59.672 43.478 0.00 0.00 38.89 3.50
5949 7535 3.437049 GGAACTCCAGAAAATCGAGGTTG 59.563 47.826 0.00 0.00 35.64 3.77
5950 7536 3.059352 ACTCCAGAAAATCGAGGTTGG 57.941 47.619 0.00 0.00 0.00 3.77
5951 7537 2.290323 ACTCCAGAAAATCGAGGTTGGG 60.290 50.000 0.00 0.00 0.00 4.12
5952 7538 1.004277 TCCAGAAAATCGAGGTTGGGG 59.996 52.381 0.00 0.00 0.00 4.96
5953 7539 1.463674 CAGAAAATCGAGGTTGGGGG 58.536 55.000 0.00 0.00 0.00 5.40
5954 7540 1.073098 AGAAAATCGAGGTTGGGGGT 58.927 50.000 0.00 0.00 0.00 4.95
5955 7541 1.173913 GAAAATCGAGGTTGGGGGTG 58.826 55.000 0.00 0.00 0.00 4.61
5956 7542 0.251608 AAAATCGAGGTTGGGGGTGG 60.252 55.000 0.00 0.00 0.00 4.61
5957 7543 2.150014 AAATCGAGGTTGGGGGTGGG 62.150 60.000 0.00 0.00 0.00 4.61
5977 7563 1.837439 GGGGGCTTAATGAAAAAGGGG 59.163 52.381 0.00 0.00 0.00 4.79
5978 7564 2.561069 GGGGGCTTAATGAAAAAGGGGA 60.561 50.000 0.00 0.00 0.00 4.81
5979 7565 3.178046 GGGGCTTAATGAAAAAGGGGAA 58.822 45.455 0.00 0.00 0.00 3.97
5980 7566 3.585289 GGGGCTTAATGAAAAAGGGGAAA 59.415 43.478 0.00 0.00 0.00 3.13
5981 7567 4.042311 GGGGCTTAATGAAAAAGGGGAAAA 59.958 41.667 0.00 0.00 0.00 2.29
5982 7568 5.456907 GGGGCTTAATGAAAAAGGGGAAAAA 60.457 40.000 0.00 0.00 0.00 1.94
6014 7600 9.185192 GCTCATTGTAATTATACATGGAAAAGC 57.815 33.333 0.00 0.00 41.51 3.51
6023 7609 9.976511 AATTATACATGGAAAAGCAAGATCATG 57.023 29.630 0.00 0.00 38.24 3.07
6024 7610 4.730949 ACATGGAAAAGCAAGATCATGG 57.269 40.909 0.00 0.00 37.05 3.66
6025 7611 3.449737 ACATGGAAAAGCAAGATCATGGG 59.550 43.478 0.00 0.00 37.05 4.00
6026 7612 2.459644 TGGAAAAGCAAGATCATGGGG 58.540 47.619 0.00 0.00 0.00 4.96
6027 7613 1.137675 GGAAAAGCAAGATCATGGGGC 59.862 52.381 0.00 0.00 0.00 5.80
6028 7614 0.819582 AAAAGCAAGATCATGGGGCG 59.180 50.000 0.00 0.00 0.00 6.13
6029 7615 1.039233 AAAGCAAGATCATGGGGCGG 61.039 55.000 0.00 0.00 0.00 6.13
6030 7616 2.908940 GCAAGATCATGGGGCGGG 60.909 66.667 0.00 0.00 0.00 6.13
6031 7617 2.908940 CAAGATCATGGGGCGGGC 60.909 66.667 0.00 0.00 0.00 6.13
6032 7618 4.209866 AAGATCATGGGGCGGGCC 62.210 66.667 13.01 13.01 0.00 5.80
6034 7620 4.290622 GATCATGGGGCGGGCCAT 62.291 66.667 23.10 10.94 37.98 4.40
6035 7621 4.608774 ATCATGGGGCGGGCCATG 62.609 66.667 23.10 21.03 43.42 3.66
6099 7685 2.728690 TGCTTCTGCGCATCAAAAAT 57.271 40.000 12.24 0.00 43.34 1.82
6100 7686 2.330286 TGCTTCTGCGCATCAAAAATG 58.670 42.857 12.24 0.00 43.34 2.32
6101 7687 1.060122 GCTTCTGCGCATCAAAAATGC 59.940 47.619 12.24 3.01 41.35 3.56
6102 7688 2.602878 CTTCTGCGCATCAAAAATGCT 58.397 42.857 12.24 0.00 42.50 3.79
6103 7689 2.728690 TCTGCGCATCAAAAATGCTT 57.271 40.000 12.24 0.00 42.50 3.91
6104 7690 3.029320 TCTGCGCATCAAAAATGCTTT 57.971 38.095 12.24 0.00 42.50 3.51
6105 7691 3.391965 TCTGCGCATCAAAAATGCTTTT 58.608 36.364 12.24 0.00 42.50 2.27
6106 7692 3.808726 TCTGCGCATCAAAAATGCTTTTT 59.191 34.783 12.24 4.57 43.20 1.94
6107 7693 4.987285 TCTGCGCATCAAAAATGCTTTTTA 59.013 33.333 12.24 0.00 40.65 1.52
6108 7694 5.464722 TCTGCGCATCAAAAATGCTTTTTAA 59.535 32.000 12.24 3.61 40.65 1.52
6109 7695 6.018425 TCTGCGCATCAAAAATGCTTTTTAAA 60.018 30.769 12.24 3.30 40.65 1.52
6110 7696 6.666417 TGCGCATCAAAAATGCTTTTTAAAT 58.334 28.000 5.66 5.24 40.65 1.40
6111 7697 6.577800 TGCGCATCAAAAATGCTTTTTAAATG 59.422 30.769 5.66 18.43 40.65 2.32
6112 7698 6.451441 GCGCATCAAAAATGCTTTTTAAATGC 60.451 34.615 26.91 26.91 45.54 3.56
6113 7699 6.032670 CGCATCAAAAATGCTTTTTAAATGCC 59.967 34.615 28.46 19.83 45.83 4.40
6114 7700 6.862090 GCATCAAAAATGCTTTTTAAATGCCA 59.138 30.769 26.69 8.04 44.63 4.92
6115 7701 7.381678 GCATCAAAAATGCTTTTTAAATGCCAA 59.618 29.630 26.69 7.57 44.63 4.52
6116 7702 8.692615 CATCAAAAATGCTTTTTAAATGCCAAC 58.307 29.630 10.40 0.00 40.65 3.77
6117 7703 7.994194 TCAAAAATGCTTTTTAAATGCCAACT 58.006 26.923 10.40 0.00 40.65 3.16
6118 7704 8.127954 TCAAAAATGCTTTTTAAATGCCAACTC 58.872 29.630 10.40 0.00 40.65 3.01
6119 7705 7.806409 AAAATGCTTTTTAAATGCCAACTCT 57.194 28.000 8.45 0.00 33.29 3.24
6120 7706 7.806409 AAATGCTTTTTAAATGCCAACTCTT 57.194 28.000 12.01 0.00 0.00 2.85
6121 7707 7.806409 AATGCTTTTTAAATGCCAACTCTTT 57.194 28.000 12.01 0.00 0.00 2.52
6122 7708 7.806409 ATGCTTTTTAAATGCCAACTCTTTT 57.194 28.000 12.01 0.00 0.00 2.27
6123 7709 7.622893 TGCTTTTTAAATGCCAACTCTTTTT 57.377 28.000 12.01 0.00 0.00 1.94
6124 7710 8.723942 TGCTTTTTAAATGCCAACTCTTTTTA 57.276 26.923 12.01 0.00 0.00 1.52
6125 7711 9.167311 TGCTTTTTAAATGCCAACTCTTTTTAA 57.833 25.926 12.01 0.00 0.00 1.52
6126 7712 9.995957 GCTTTTTAAATGCCAACTCTTTTTAAA 57.004 25.926 4.48 0.00 32.74 1.52
6149 7735 5.350504 AAAAATGTTGGGTTCATGTCACA 57.649 34.783 0.00 0.00 0.00 3.58
6150 7736 4.320608 AAATGTTGGGTTCATGTCACAC 57.679 40.909 0.00 0.00 0.00 3.82
6151 7737 2.727123 TGTTGGGTTCATGTCACACT 57.273 45.000 0.00 0.00 0.00 3.55
6152 7738 2.571212 TGTTGGGTTCATGTCACACTC 58.429 47.619 0.00 0.00 0.00 3.51
6153 7739 1.531149 GTTGGGTTCATGTCACACTCG 59.469 52.381 0.00 0.00 0.00 4.18
6154 7740 1.044611 TGGGTTCATGTCACACTCGA 58.955 50.000 0.00 0.00 0.00 4.04
6155 7741 1.414550 TGGGTTCATGTCACACTCGAA 59.585 47.619 0.00 0.00 0.00 3.71
6156 7742 2.038426 TGGGTTCATGTCACACTCGAAT 59.962 45.455 0.00 0.00 0.00 3.34
6157 7743 2.416547 GGGTTCATGTCACACTCGAATG 59.583 50.000 0.00 0.00 0.00 2.67
6158 7744 2.159653 GGTTCATGTCACACTCGAATGC 60.160 50.000 0.00 0.00 0.00 3.56
6159 7745 2.738846 GTTCATGTCACACTCGAATGCT 59.261 45.455 0.00 0.00 0.00 3.79
6160 7746 3.866883 TCATGTCACACTCGAATGCTA 57.133 42.857 0.00 0.00 0.00 3.49
6161 7747 4.186856 TCATGTCACACTCGAATGCTAA 57.813 40.909 0.00 0.00 0.00 3.09
6162 7748 4.565022 TCATGTCACACTCGAATGCTAAA 58.435 39.130 0.00 0.00 0.00 1.85
6163 7749 4.994217 TCATGTCACACTCGAATGCTAAAA 59.006 37.500 0.00 0.00 0.00 1.52
6164 7750 5.468409 TCATGTCACACTCGAATGCTAAAAA 59.532 36.000 0.00 0.00 0.00 1.94
6165 7751 5.090652 TGTCACACTCGAATGCTAAAAAC 57.909 39.130 0.00 0.00 0.00 2.43
6166 7752 4.814234 TGTCACACTCGAATGCTAAAAACT 59.186 37.500 0.00 0.00 0.00 2.66
6167 7753 5.295787 TGTCACACTCGAATGCTAAAAACTT 59.704 36.000 0.00 0.00 0.00 2.66
6168 7754 6.480651 TGTCACACTCGAATGCTAAAAACTTA 59.519 34.615 0.00 0.00 0.00 2.24
6169 7755 7.011576 TGTCACACTCGAATGCTAAAAACTTAA 59.988 33.333 0.00 0.00 0.00 1.85
6170 7756 8.015658 GTCACACTCGAATGCTAAAAACTTAAT 58.984 33.333 0.00 0.00 0.00 1.40
6171 7757 8.227791 TCACACTCGAATGCTAAAAACTTAATC 58.772 33.333 0.00 0.00 0.00 1.75
6172 7758 8.015087 CACACTCGAATGCTAAAAACTTAATCA 58.985 33.333 0.00 0.00 0.00 2.57
6173 7759 8.730680 ACACTCGAATGCTAAAAACTTAATCAT 58.269 29.630 0.00 0.00 0.00 2.45
6174 7760 9.559958 CACTCGAATGCTAAAAACTTAATCATT 57.440 29.630 0.00 0.00 0.00 2.57
6213 7799 8.999220 AAAAACAATTTTGAATGCCAAATGTT 57.001 23.077 0.00 0.00 43.91 2.71
6215 7801 9.513727 AAAACAATTTTGAATGCCAAATGTTAC 57.486 25.926 8.82 0.00 42.50 2.50
6216 7802 6.886307 ACAATTTTGAATGCCAAATGTTACG 58.114 32.000 0.00 0.00 43.59 3.18
6217 7803 4.981389 TTTTGAATGCCAAATGTTACGC 57.019 36.364 0.00 0.00 43.59 4.42
6218 7804 3.932545 TTGAATGCCAAATGTTACGCT 57.067 38.095 0.00 0.00 0.00 5.07
6219 7805 3.932545 TGAATGCCAAATGTTACGCTT 57.067 38.095 0.00 0.00 0.00 4.68
6220 7806 3.832276 TGAATGCCAAATGTTACGCTTC 58.168 40.909 0.00 0.00 0.00 3.86
6221 7807 3.505680 TGAATGCCAAATGTTACGCTTCT 59.494 39.130 0.00 0.00 0.00 2.85
6222 7808 4.022416 TGAATGCCAAATGTTACGCTTCTT 60.022 37.500 0.00 0.00 0.00 2.52
6223 7809 4.519540 ATGCCAAATGTTACGCTTCTTT 57.480 36.364 0.00 0.00 0.00 2.52
6224 7810 4.314740 TGCCAAATGTTACGCTTCTTTT 57.685 36.364 0.00 0.00 0.00 2.27
6225 7811 4.688021 TGCCAAATGTTACGCTTCTTTTT 58.312 34.783 0.00 0.00 0.00 1.94
6245 7831 6.715344 TTTTTATCGACGAAGCACTGTTAT 57.285 33.333 0.00 0.00 0.00 1.89
6246 7832 5.944049 TTTATCGACGAAGCACTGTTATC 57.056 39.130 0.00 0.00 0.00 1.75
6247 7833 2.273370 TCGACGAAGCACTGTTATCC 57.727 50.000 0.00 0.00 0.00 2.59
6248 7834 1.135199 TCGACGAAGCACTGTTATCCC 60.135 52.381 0.00 0.00 0.00 3.85
6249 7835 1.135083 CGACGAAGCACTGTTATCCCT 60.135 52.381 0.00 0.00 0.00 4.20
6250 7836 2.674177 CGACGAAGCACTGTTATCCCTT 60.674 50.000 0.00 0.00 0.00 3.95
6251 7837 3.335579 GACGAAGCACTGTTATCCCTTT 58.664 45.455 0.00 0.00 0.00 3.11
6252 7838 3.751518 ACGAAGCACTGTTATCCCTTTT 58.248 40.909 0.00 0.00 0.00 2.27
6253 7839 3.751698 ACGAAGCACTGTTATCCCTTTTC 59.248 43.478 0.00 0.00 0.00 2.29
6254 7840 3.127030 CGAAGCACTGTTATCCCTTTTCC 59.873 47.826 0.00 0.00 0.00 3.13
6255 7841 3.806949 AGCACTGTTATCCCTTTTCCA 57.193 42.857 0.00 0.00 0.00 3.53
6256 7842 4.322057 AGCACTGTTATCCCTTTTCCAT 57.678 40.909 0.00 0.00 0.00 3.41
6257 7843 4.677182 AGCACTGTTATCCCTTTTCCATT 58.323 39.130 0.00 0.00 0.00 3.16
6258 7844 4.706962 AGCACTGTTATCCCTTTTCCATTC 59.293 41.667 0.00 0.00 0.00 2.67
6259 7845 4.462483 GCACTGTTATCCCTTTTCCATTCA 59.538 41.667 0.00 0.00 0.00 2.57
6260 7846 5.047377 GCACTGTTATCCCTTTTCCATTCAA 60.047 40.000 0.00 0.00 0.00 2.69
6261 7847 6.518200 GCACTGTTATCCCTTTTCCATTCAAA 60.518 38.462 0.00 0.00 0.00 2.69
6262 7848 7.441017 CACTGTTATCCCTTTTCCATTCAAAA 58.559 34.615 0.00 0.00 0.00 2.44
6263 7849 8.096414 CACTGTTATCCCTTTTCCATTCAAAAT 58.904 33.333 0.00 0.00 0.00 1.82
6264 7850 8.659527 ACTGTTATCCCTTTTCCATTCAAAATT 58.340 29.630 0.00 0.00 0.00 1.82
6265 7851 8.845413 TGTTATCCCTTTTCCATTCAAAATTG 57.155 30.769 0.00 0.00 0.00 2.32
6266 7852 8.435982 TGTTATCCCTTTTCCATTCAAAATTGT 58.564 29.630 0.00 0.00 0.00 2.71
6267 7853 8.935844 GTTATCCCTTTTCCATTCAAAATTGTC 58.064 33.333 0.00 0.00 0.00 3.18
6268 7854 6.491714 TCCCTTTTCCATTCAAAATTGTCA 57.508 33.333 0.00 0.00 0.00 3.58
6269 7855 6.893583 TCCCTTTTCCATTCAAAATTGTCAA 58.106 32.000 0.00 0.00 0.00 3.18
6270 7856 6.991531 TCCCTTTTCCATTCAAAATTGTCAAG 59.008 34.615 0.00 0.00 0.00 3.02
6271 7857 6.293571 CCCTTTTCCATTCAAAATTGTCAAGC 60.294 38.462 0.00 0.00 0.00 4.01
6272 7858 6.260493 CCTTTTCCATTCAAAATTGTCAAGCA 59.740 34.615 0.00 0.00 0.00 3.91
6273 7859 6.601741 TTTCCATTCAAAATTGTCAAGCAC 57.398 33.333 0.00 0.00 0.00 4.40
6274 7860 4.297510 TCCATTCAAAATTGTCAAGCACG 58.702 39.130 0.00 0.00 0.00 5.34
6275 7861 3.120923 CCATTCAAAATTGTCAAGCACGC 60.121 43.478 0.00 0.00 0.00 5.34
6276 7862 3.435105 TTCAAAATTGTCAAGCACGCT 57.565 38.095 0.00 0.00 0.00 5.07
6277 7863 3.435105 TCAAAATTGTCAAGCACGCTT 57.565 38.095 0.00 0.00 36.60 4.68
6287 7873 3.870723 CAAGCACGCTTGTTACACTAA 57.129 42.857 21.04 0.00 45.91 2.24
6288 7874 3.541711 CAAGCACGCTTGTTACACTAAC 58.458 45.455 21.04 0.00 45.91 2.34
6289 7875 2.828877 AGCACGCTTGTTACACTAACA 58.171 42.857 0.00 0.00 46.13 2.41
6302 7888 8.583810 TGTTACACTAACAAGAACATCTACAC 57.416 34.615 0.00 0.00 44.95 2.90
6303 7889 8.198778 TGTTACACTAACAAGAACATCTACACA 58.801 33.333 0.00 0.00 44.95 3.72
6304 7890 8.485591 GTTACACTAACAAGAACATCTACACAC 58.514 37.037 0.00 0.00 38.52 3.82
6305 7891 5.690409 ACACTAACAAGAACATCTACACACG 59.310 40.000 0.00 0.00 0.00 4.49
6306 7892 5.918576 CACTAACAAGAACATCTACACACGA 59.081 40.000 0.00 0.00 0.00 4.35
6307 7893 6.419710 CACTAACAAGAACATCTACACACGAA 59.580 38.462 0.00 0.00 0.00 3.85
6308 7894 6.982141 ACTAACAAGAACATCTACACACGAAA 59.018 34.615 0.00 0.00 0.00 3.46
6309 7895 6.861065 AACAAGAACATCTACACACGAAAT 57.139 33.333 0.00 0.00 0.00 2.17
6310 7896 6.467723 ACAAGAACATCTACACACGAAATC 57.532 37.500 0.00 0.00 0.00 2.17
6311 7897 5.408604 ACAAGAACATCTACACACGAAATCC 59.591 40.000 0.00 0.00 0.00 3.01
6312 7898 5.147330 AGAACATCTACACACGAAATCCA 57.853 39.130 0.00 0.00 0.00 3.41
6313 7899 4.929808 AGAACATCTACACACGAAATCCAC 59.070 41.667 0.00 0.00 0.00 4.02
6314 7900 4.537135 ACATCTACACACGAAATCCACT 57.463 40.909 0.00 0.00 0.00 4.00
6315 7901 4.894784 ACATCTACACACGAAATCCACTT 58.105 39.130 0.00 0.00 0.00 3.16
6316 7902 5.305585 ACATCTACACACGAAATCCACTTT 58.694 37.500 0.00 0.00 0.00 2.66
6317 7903 5.763204 ACATCTACACACGAAATCCACTTTT 59.237 36.000 0.00 0.00 0.00 2.27
6318 7904 6.262273 ACATCTACACACGAAATCCACTTTTT 59.738 34.615 0.00 0.00 0.00 1.94
6319 7905 7.442969 ACATCTACACACGAAATCCACTTTTTA 59.557 33.333 0.00 0.00 0.00 1.52
6320 7906 7.789273 TCTACACACGAAATCCACTTTTTAA 57.211 32.000 0.00 0.00 0.00 1.52
6321 7907 8.211116 TCTACACACGAAATCCACTTTTTAAA 57.789 30.769 0.00 0.00 0.00 1.52
6322 7908 8.675504 TCTACACACGAAATCCACTTTTTAAAA 58.324 29.630 0.00 0.00 0.00 1.52
6323 7909 9.458374 CTACACACGAAATCCACTTTTTAAAAT 57.542 29.630 0.55 0.00 0.00 1.82
6324 7910 8.710835 ACACACGAAATCCACTTTTTAAAATT 57.289 26.923 0.55 0.00 0.00 1.82
6325 7911 9.157104 ACACACGAAATCCACTTTTTAAAATTT 57.843 25.926 0.55 0.00 0.00 1.82
6326 7912 9.980780 CACACGAAATCCACTTTTTAAAATTTT 57.019 25.926 8.75 8.75 0.00 1.82
6363 7949 9.787532 ACATATTTTGAATTTACTGTTCATCCG 57.212 29.630 0.00 0.00 35.68 4.18
6367 7953 9.757227 ATTTTGAATTTACTGTTCATCCGAAAA 57.243 25.926 0.00 0.00 35.68 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 7.307989 CCAATAAAGTGGAGTGTGTTTAGACTG 60.308 40.741 0.00 0.00 41.65 3.51
41 42 8.472007 TTGTTCAATAACCAATAAAGTGGAGT 57.528 30.769 3.02 0.00 41.65 3.85
86 88 7.785028 TGTGTGTCTCCTTAATACTCCATATCT 59.215 37.037 0.00 0.00 0.00 1.98
90 92 6.408548 CCATGTGTGTCTCCTTAATACTCCAT 60.409 42.308 0.00 0.00 0.00 3.41
106 108 1.985159 TCTTTAGGGCTCCATGTGTGT 59.015 47.619 0.00 0.00 0.00 3.72
118 120 5.367060 ACATACTCTAGGCCTTTCTTTAGGG 59.633 44.000 12.58 2.65 35.74 3.53
129 131 5.595133 AGTCTCACTAAACATACTCTAGGCC 59.405 44.000 0.00 0.00 0.00 5.19
151 153 5.367937 AGGAATCAATACTGAGGCACATAGT 59.632 40.000 0.00 0.00 34.23 2.12
158 160 4.384940 GAAGGAGGAATCAATACTGAGGC 58.615 47.826 0.00 0.00 34.23 4.70
159 161 4.657969 AGGAAGGAGGAATCAATACTGAGG 59.342 45.833 0.00 0.00 34.23 3.86
162 164 5.053145 CGAAGGAAGGAGGAATCAATACTG 58.947 45.833 0.00 0.00 0.00 2.74
253 255 0.035820 TCACAGAAATACGGGTGGGC 60.036 55.000 0.00 0.00 32.48 5.36
296 298 2.459442 CGTGCAGCTAGCTTGAGGC 61.459 63.158 16.46 16.09 45.94 4.70
297 299 1.079543 ACGTGCAGCTAGCTTGAGG 60.080 57.895 16.46 12.28 45.94 3.86
298 300 0.108898 AGACGTGCAGCTAGCTTGAG 60.109 55.000 16.46 9.49 45.94 3.02
299 301 0.389037 CAGACGTGCAGCTAGCTTGA 60.389 55.000 16.46 0.62 45.94 3.02
301 303 0.888619 TACAGACGTGCAGCTAGCTT 59.111 50.000 16.46 0.00 45.94 3.74
303 305 1.272781 CTTACAGACGTGCAGCTAGC 58.727 55.000 6.62 6.62 45.96 3.42
304 306 1.272781 GCTTACAGACGTGCAGCTAG 58.727 55.000 0.00 0.00 32.53 3.42
305 307 0.456142 CGCTTACAGACGTGCAGCTA 60.456 55.000 0.00 0.00 32.91 3.32
306 308 1.734477 CGCTTACAGACGTGCAGCT 60.734 57.895 0.00 0.00 32.91 4.24
307 309 1.078759 ATCGCTTACAGACGTGCAGC 61.079 55.000 0.00 0.00 32.13 5.25
334 337 4.787871 AAGCGCTCTCACTTGCTT 57.212 50.000 12.06 0.00 42.48 3.91
336 339 2.866028 CCAAGCGCTCTCACTTGC 59.134 61.111 12.06 0.00 41.56 4.01
378 381 1.450312 CTGGAATGACCGACCCAGC 60.450 63.158 0.00 0.00 39.59 4.85
395 398 3.644966 TCCTCGGCAATAAAATGTCCT 57.355 42.857 0.00 0.00 0.00 3.85
407 410 2.693591 CAACTATCTAGGTTCCTCGGCA 59.306 50.000 0.00 0.00 0.00 5.69
431 434 2.047179 GTTCGCAGGGACTCCACC 60.047 66.667 0.00 0.00 34.60 4.61
449 452 1.414919 ACAGAGGGTTCTTACAACGCA 59.585 47.619 4.60 0.00 35.80 5.24
450 453 2.067013 GACAGAGGGTTCTTACAACGC 58.933 52.381 0.00 0.00 0.00 4.84
452 455 3.057734 CGTGACAGAGGGTTCTTACAAC 58.942 50.000 0.00 0.00 0.00 3.32
467 470 2.414179 GTGTCCCGTGACGTGACA 59.586 61.111 18.72 18.72 44.86 3.58
486 489 3.300009 CAAAAATTCGAGTGGACAGTGC 58.700 45.455 0.00 0.00 0.00 4.40
498 501 1.445926 CCCGCCCAGCAAAAATTCG 60.446 57.895 0.00 0.00 0.00 3.34
509 512 4.408821 GCTCACACATCCCGCCCA 62.409 66.667 0.00 0.00 0.00 5.36
510 513 4.408821 TGCTCACACATCCCGCCC 62.409 66.667 0.00 0.00 0.00 6.13
511 514 2.821366 CTGCTCACACATCCCGCC 60.821 66.667 0.00 0.00 0.00 6.13
512 515 3.503363 GCTGCTCACACATCCCGC 61.503 66.667 0.00 0.00 0.00 6.13
514 517 1.748122 CTGGCTGCTCACACATCCC 60.748 63.158 0.00 0.00 0.00 3.85
515 518 0.107312 ATCTGGCTGCTCACACATCC 60.107 55.000 0.00 0.00 0.00 3.51
516 519 1.015109 CATCTGGCTGCTCACACATC 58.985 55.000 0.00 0.00 0.00 3.06
517 520 1.030488 GCATCTGGCTGCTCACACAT 61.030 55.000 0.00 0.00 39.12 3.21
532 571 2.613595 TGCAAACCGATGATACAGCATC 59.386 45.455 0.00 0.00 40.93 3.91
536 575 1.999735 ACGTGCAAACCGATGATACAG 59.000 47.619 1.86 0.00 0.00 2.74
565 604 8.634335 TCTATTTGTCCAGATCTATCTCTGAG 57.366 38.462 0.00 0.00 44.48 3.35
624 663 7.994425 TGGTTGCTCAAATATGTCTTTCTTA 57.006 32.000 0.00 0.00 0.00 2.10
668 1219 5.523552 CCTGCGAAAAATTCTCCAACTTTTT 59.476 36.000 0.00 0.00 35.42 1.94
669 1220 5.049828 CCTGCGAAAAATTCTCCAACTTTT 58.950 37.500 0.00 0.00 0.00 2.27
670 1221 4.620982 CCTGCGAAAAATTCTCCAACTTT 58.379 39.130 0.00 0.00 0.00 2.66
671 1222 3.552890 GCCTGCGAAAAATTCTCCAACTT 60.553 43.478 0.00 0.00 0.00 2.66
672 1223 2.029918 GCCTGCGAAAAATTCTCCAACT 60.030 45.455 0.00 0.00 0.00 3.16
673 1224 2.328473 GCCTGCGAAAAATTCTCCAAC 58.672 47.619 0.00 0.00 0.00 3.77
676 1227 0.887933 TGGCCTGCGAAAAATTCTCC 59.112 50.000 3.32 0.00 0.00 3.71
708 1261 6.872547 CACAGGTCATCATGATAATAGACAGG 59.127 42.308 19.75 14.67 0.00 4.00
714 1267 7.616528 TTCTCCACAGGTCATCATGATAATA 57.383 36.000 8.15 0.00 0.00 0.98
717 1270 4.202295 GCTTCTCCACAGGTCATCATGATA 60.202 45.833 8.15 0.00 0.00 2.15
723 1276 2.102252 CCTAGCTTCTCCACAGGTCATC 59.898 54.545 0.00 0.00 0.00 2.92
726 1279 1.562783 ACCTAGCTTCTCCACAGGTC 58.437 55.000 0.00 0.00 34.49 3.85
728 1281 2.432510 CCTTACCTAGCTTCTCCACAGG 59.567 54.545 0.00 0.00 0.00 4.00
830 1385 4.840005 GGCGGAGGAAAGCGGAGG 62.840 72.222 0.00 0.00 0.00 4.30
837 1392 2.668212 CAACTGCGGCGGAGGAAA 60.668 61.111 31.33 0.00 0.00 3.13
838 1393 3.589654 CTCAACTGCGGCGGAGGAA 62.590 63.158 31.33 15.31 0.00 3.36
839 1394 4.069232 CTCAACTGCGGCGGAGGA 62.069 66.667 31.33 18.73 0.00 3.71
840 1395 3.376935 ATCTCAACTGCGGCGGAGG 62.377 63.158 31.33 15.40 0.00 4.30
841 1396 1.880340 GATCTCAACTGCGGCGGAG 60.880 63.158 27.12 27.12 0.00 4.63
842 1397 2.184322 GATCTCAACTGCGGCGGA 59.816 61.111 17.15 4.40 0.00 5.54
846 1401 1.272781 GAACTCGATCTCAACTGCGG 58.727 55.000 0.00 0.00 0.00 5.69
848 1403 1.651138 CACGAACTCGATCTCAACTGC 59.349 52.381 6.05 0.00 43.02 4.40
849 1404 2.935042 ACACGAACTCGATCTCAACTG 58.065 47.619 6.05 0.00 43.02 3.16
850 1405 3.644884 AACACGAACTCGATCTCAACT 57.355 42.857 6.05 0.00 43.02 3.16
852 1407 3.057019 CCAAACACGAACTCGATCTCAA 58.943 45.455 6.05 0.00 43.02 3.02
854 1409 1.390463 GCCAAACACGAACTCGATCTC 59.610 52.381 6.05 0.00 43.02 2.75
855 1410 1.270094 TGCCAAACACGAACTCGATCT 60.270 47.619 6.05 0.00 43.02 2.75
856 1411 1.144969 TGCCAAACACGAACTCGATC 58.855 50.000 6.05 0.00 43.02 3.69
858 1413 1.588674 AATGCCAAACACGAACTCGA 58.411 45.000 6.05 0.00 43.02 4.04
859 1414 2.043411 CAAATGCCAAACACGAACTCG 58.957 47.619 0.00 0.00 46.33 4.18
860 1415 1.786579 GCAAATGCCAAACACGAACTC 59.213 47.619 0.00 0.00 34.31 3.01
868 1423 2.346099 TAAGCGAGCAAATGCCAAAC 57.654 45.000 0.94 0.00 43.38 2.93
896 1457 1.265905 GTTTGGTTTGTAGCGGAGGTG 59.734 52.381 0.00 0.00 40.22 4.00
897 1458 1.601166 GTTTGGTTTGTAGCGGAGGT 58.399 50.000 0.00 0.00 44.89 3.85
898 1459 0.515564 CGTTTGGTTTGTAGCGGAGG 59.484 55.000 0.00 0.00 0.00 4.30
899 1460 0.110373 GCGTTTGGTTTGTAGCGGAG 60.110 55.000 0.00 0.00 0.00 4.63
900 1461 0.814410 TGCGTTTGGTTTGTAGCGGA 60.814 50.000 0.00 0.00 0.00 5.54
901 1462 0.029567 TTGCGTTTGGTTTGTAGCGG 59.970 50.000 0.00 0.00 0.00 5.52
902 1463 1.515221 GTTTGCGTTTGGTTTGTAGCG 59.485 47.619 0.00 0.00 0.00 4.26
1063 1630 4.890306 GGAGGAGGAGGAGGGGGC 62.890 77.778 0.00 0.00 0.00 5.80
1066 1642 0.481128 GAGTAGGAGGAGGAGGAGGG 59.519 65.000 0.00 0.00 0.00 4.30
1069 1645 1.525175 GAGGAGTAGGAGGAGGAGGA 58.475 60.000 0.00 0.00 0.00 3.71
1307 1926 4.140599 AAGCGCCCGAGCAGAGAG 62.141 66.667 2.29 0.00 39.83 3.20
1340 1959 1.884235 ACAAAAGTGAGAAGGCGGAG 58.116 50.000 0.00 0.00 0.00 4.63
1346 1965 4.800471 GCAAGGTCAAACAAAAGTGAGAAG 59.200 41.667 0.00 0.00 0.00 2.85
1419 2050 2.900546 ACTCGAGGGTCTTCTTGTCAAT 59.099 45.455 18.41 0.00 0.00 2.57
1493 2124 5.240844 GCGGCATTGGTTAATTATTACCTCT 59.759 40.000 7.65 0.00 35.41 3.69
1521 2152 2.094675 CAAAGGCAATGACGGGAAGAT 58.905 47.619 0.00 0.00 0.00 2.40
1529 2160 2.053627 CAACGAAGCAAAGGCAATGAC 58.946 47.619 0.00 0.00 44.61 3.06
1536 2167 0.031178 AGCAAGCAACGAAGCAAAGG 59.969 50.000 6.62 0.00 36.85 3.11
1538 2169 0.248990 CCAGCAAGCAACGAAGCAAA 60.249 50.000 6.62 0.00 36.85 3.68
1558 2189 3.747854 GCCCCTAGCGAAATTACTACT 57.252 47.619 0.00 0.00 0.00 2.57
1578 2209 7.624549 AGGCCAATCAGGTACACTATATATTG 58.375 38.462 5.01 0.00 40.61 1.90
1580 2211 9.507381 AATAGGCCAATCAGGTACACTATATAT 57.493 33.333 5.01 0.00 40.61 0.86
1582 2213 7.311297 CCAATAGGCCAATCAGGTACACTATAT 60.311 40.741 5.01 0.00 40.61 0.86
1583 2214 6.013725 CCAATAGGCCAATCAGGTACACTATA 60.014 42.308 5.01 0.00 40.61 1.31
1630 2269 1.138069 GAGAGGCTCTCCCTTACAAGC 59.862 57.143 30.16 5.07 46.60 4.01
1642 2312 2.773487 TCTGTATCGCTAGAGAGGCTC 58.227 52.381 6.34 6.34 0.00 4.70
1736 2470 6.153170 TCCATTTGTTTCTGCATCACATACAT 59.847 34.615 0.00 0.00 0.00 2.29
1738 2472 5.953183 TCCATTTGTTTCTGCATCACATAC 58.047 37.500 0.00 0.00 0.00 2.39
1747 2481 3.383761 CACAACCTCCATTTGTTTCTGC 58.616 45.455 0.00 0.00 34.91 4.26
1791 2876 6.751514 AGACATAGTTTGACACACAACAAA 57.248 33.333 0.00 0.00 38.29 2.83
1827 2917 0.309922 CTGCACAGACAAAGCACAGG 59.690 55.000 0.00 0.00 34.13 4.00
1839 2929 0.883833 AGCCCGAAATTTCTGCACAG 59.116 50.000 23.28 6.86 0.00 3.66
2133 3223 9.579932 ACTCACTGAGGAGAATTCTTTTAATTT 57.420 29.630 9.87 0.00 38.30 1.82
2134 3224 9.007901 CACTCACTGAGGAGAATTCTTTTAATT 57.992 33.333 9.87 0.00 38.30 1.40
2135 3225 7.120432 GCACTCACTGAGGAGAATTCTTTTAAT 59.880 37.037 9.87 0.00 38.30 1.40
2136 3226 6.428159 GCACTCACTGAGGAGAATTCTTTTAA 59.572 38.462 9.87 0.00 38.30 1.52
2137 3227 5.934625 GCACTCACTGAGGAGAATTCTTTTA 59.065 40.000 9.87 0.00 38.30 1.52
2147 3238 2.756840 TCATTGCACTCACTGAGGAG 57.243 50.000 10.86 4.00 40.79 3.69
2158 3249 7.760794 TGTATTCAATTCCAATCTTCATTGCAC 59.239 33.333 0.00 0.00 38.53 4.57
2303 3404 9.998106 ATAGTAGCGAACCTTGTGAATAATAAT 57.002 29.630 0.00 0.00 0.00 1.28
2322 3423 6.650390 GTGGGTACTACTCTAGTCATAGTAGC 59.350 46.154 20.04 20.04 45.99 3.58
2341 3446 1.363280 TCACTACTGGATGGGTGGGTA 59.637 52.381 0.00 0.00 0.00 3.69
2380 3485 4.463788 CCCATCCCACCAAGGCCC 62.464 72.222 0.00 0.00 35.39 5.80
2394 3531 5.420739 GCCATTCTAAGATTTTACAACCCCA 59.579 40.000 0.00 0.00 0.00 4.96
2422 3559 1.915614 GACACCATCCGCTGCACAAG 61.916 60.000 0.00 0.00 0.00 3.16
2732 4030 3.317149 TCGTCCGGATGTAAATCTGGTAG 59.683 47.826 22.88 14.00 45.27 3.18
3176 4474 5.632034 ATTATGGGAAGACCTACTGTTCC 57.368 43.478 0.00 0.00 41.11 3.62
3291 4611 1.669604 TACAACCAAGCAAACGAGCA 58.330 45.000 0.00 0.00 36.85 4.26
3310 4630 4.694760 TGAGCATGTTACATGCCTAGAT 57.305 40.909 36.92 23.56 45.59 1.98
3353 4775 4.130118 CAACCCTCATCCTGCTATGTTAC 58.870 47.826 0.00 0.00 0.00 2.50
3470 4893 4.556942 TGATATTCCTGAATTGCGCAAG 57.443 40.909 28.62 14.45 34.38 4.01
3474 4897 8.077991 ACATTACATTGATATTCCTGAATTGCG 58.922 33.333 0.00 0.00 32.50 4.85
3510 4934 3.589988 CAACCTCTCTCACGCTTTACAT 58.410 45.455 0.00 0.00 0.00 2.29
3904 5336 4.096382 ACATACCGTGAATGATTGAAAGGC 59.904 41.667 0.00 0.00 0.00 4.35
3932 5367 8.591072 TGGGTATAGGCTCACATACTTATTTAC 58.409 37.037 0.00 0.00 0.00 2.01
4359 5810 3.194116 GGATACAGGAGACGTGTTGGTAA 59.806 47.826 0.00 0.00 0.00 2.85
4397 5851 4.024387 CCACATGGTAATGCCGTAATACAC 60.024 45.833 0.00 0.00 41.21 2.90
4578 6033 0.511221 GTTCTTTGCTACGCTTGCGA 59.489 50.000 22.03 4.66 0.00 5.10
4581 6036 2.143122 TCCAGTTCTTTGCTACGCTTG 58.857 47.619 0.00 0.00 0.00 4.01
4653 6108 5.622770 ATGTAAAGACGGCAAACCTAAAG 57.377 39.130 0.00 0.00 0.00 1.85
4664 6119 6.204108 AGTTTCACTGGTAAATGTAAAGACGG 59.796 38.462 0.00 0.00 0.00 4.79
4677 6132 5.116180 CACACAAAGAGAGTTTCACTGGTA 58.884 41.667 0.00 0.00 0.00 3.25
4680 6135 3.242870 GCCACACAAAGAGAGTTTCACTG 60.243 47.826 0.00 0.00 0.00 3.66
4757 6212 7.690952 TGTAAAGACGGCAAACCTAAAATAT 57.309 32.000 0.00 0.00 0.00 1.28
4787 6242 3.242870 GCCACACAAAGAGAGTTTCACTG 60.243 47.826 0.00 0.00 0.00 3.66
4933 6391 8.928448 AGTTACACTGATGACATCTATACCAAT 58.072 33.333 16.25 0.00 0.00 3.16
4934 6392 8.306313 AGTTACACTGATGACATCTATACCAA 57.694 34.615 16.25 1.85 0.00 3.67
4935 6393 7.898014 AGTTACACTGATGACATCTATACCA 57.102 36.000 16.25 0.00 0.00 3.25
4936 6394 8.847196 TGTAGTTACACTGATGACATCTATACC 58.153 37.037 16.25 0.00 0.00 2.73
4939 6397 9.136323 TCATGTAGTTACACTGATGACATCTAT 57.864 33.333 16.25 1.90 39.30 1.98
4940 6398 8.519799 TCATGTAGTTACACTGATGACATCTA 57.480 34.615 16.25 2.72 39.30 1.98
4941 6399 7.123397 ACTCATGTAGTTACACTGATGACATCT 59.877 37.037 16.25 0.00 39.30 2.90
4983 6441 2.297033 GACAGTCCACAACAAATGCCAT 59.703 45.455 0.00 0.00 0.00 4.40
5010 6468 7.254522 CGTACCAACTAAACAACATACACAACT 60.255 37.037 0.00 0.00 0.00 3.16
5046 6504 7.796838 TGTACTTCGAAATTCAGATCAACTTG 58.203 34.615 0.00 0.00 0.00 3.16
5092 6550 5.597806 TCTACTACATAATTGCCAAGTCCG 58.402 41.667 0.00 0.00 0.00 4.79
5126 6679 2.162681 GGGATTGGTGTGGTTCTCAAG 58.837 52.381 0.00 0.00 0.00 3.02
5135 6688 1.271325 TGCACTACTGGGATTGGTGTG 60.271 52.381 0.00 0.00 0.00 3.82
5284 6849 2.231964 TGGCCATTCAATTCACAGAAGC 59.768 45.455 0.00 0.00 0.00 3.86
5335 6900 1.350193 ATGCTCGTACGTTGCTTCTG 58.650 50.000 26.17 8.07 0.00 3.02
5336 6901 2.933495 TATGCTCGTACGTTGCTTCT 57.067 45.000 26.17 17.33 0.00 2.85
5348 6913 4.969196 ACCGCCGCCATATGCTCG 62.969 66.667 0.00 3.00 38.05 5.03
5380 6945 1.434188 TGGAGCTTTGTCCTTCCAGA 58.566 50.000 0.00 0.00 37.52 3.86
5453 7018 3.189618 TGCAATGCATAGGAGTCTCAG 57.810 47.619 2.72 0.00 31.71 3.35
5473 7039 6.485171 ACTACCAAGCCATTTGACTAGAAAT 58.515 36.000 0.00 0.00 39.21 2.17
5518 7084 6.341316 AGTGCTGATATCAGTCGTAATGTTT 58.659 36.000 28.92 6.51 45.45 2.83
5671 7238 1.601903 TCAACGCATGTTCTGACAACC 59.398 47.619 0.00 0.00 39.66 3.77
5700 7267 3.570975 ACCACGGACCATTAAGAAAAACC 59.429 43.478 0.00 0.00 0.00 3.27
5737 7304 3.066760 AGTCGATAATGTCTGCACGATGA 59.933 43.478 0.00 0.00 32.78 2.92
5738 7305 3.375642 AGTCGATAATGTCTGCACGATG 58.624 45.455 0.00 0.00 32.78 3.84
5739 7306 3.717400 AGTCGATAATGTCTGCACGAT 57.283 42.857 0.00 0.00 32.78 3.73
5740 7307 3.179048 CAAGTCGATAATGTCTGCACGA 58.821 45.455 0.00 0.00 0.00 4.35
5741 7308 2.282555 CCAAGTCGATAATGTCTGCACG 59.717 50.000 0.00 0.00 0.00 5.34
5742 7309 3.062639 CACCAAGTCGATAATGTCTGCAC 59.937 47.826 0.00 0.00 0.00 4.57
5743 7310 3.056179 TCACCAAGTCGATAATGTCTGCA 60.056 43.478 0.00 0.00 0.00 4.41
5745 7312 4.998788 TCTCACCAAGTCGATAATGTCTG 58.001 43.478 0.00 0.00 0.00 3.51
5746 7313 5.661056 TTCTCACCAAGTCGATAATGTCT 57.339 39.130 0.00 0.00 0.00 3.41
5747 7314 6.910536 ATTTCTCACCAAGTCGATAATGTC 57.089 37.500 0.00 0.00 0.00 3.06
5753 7338 9.226606 TGTTAAATTATTTCTCACCAAGTCGAT 57.773 29.630 0.00 0.00 0.00 3.59
5774 7359 6.457663 CGATTCAGTCACAAAACCACTGTTAA 60.458 38.462 0.00 0.00 38.94 2.01
5787 7372 3.674410 GCAGATGAGACGATTCAGTCACA 60.674 47.826 9.64 9.64 43.61 3.58
5788 7373 2.857152 GCAGATGAGACGATTCAGTCAC 59.143 50.000 9.99 5.68 43.24 3.67
5789 7374 2.493278 TGCAGATGAGACGATTCAGTCA 59.507 45.455 9.99 0.00 43.24 3.41
5790 7375 2.857152 GTGCAGATGAGACGATTCAGTC 59.143 50.000 0.00 1.89 41.23 3.51
5791 7376 2.417924 GGTGCAGATGAGACGATTCAGT 60.418 50.000 0.00 0.00 0.00 3.41
5792 7377 2.200067 GGTGCAGATGAGACGATTCAG 58.800 52.381 0.00 0.00 0.00 3.02
5819 7405 4.163458 ACCCGAGAATGCCACTAAATAAGA 59.837 41.667 0.00 0.00 0.00 2.10
5820 7406 4.451900 ACCCGAGAATGCCACTAAATAAG 58.548 43.478 0.00 0.00 0.00 1.73
5821 7407 4.497291 ACCCGAGAATGCCACTAAATAA 57.503 40.909 0.00 0.00 0.00 1.40
5822 7408 4.497291 AACCCGAGAATGCCACTAAATA 57.503 40.909 0.00 0.00 0.00 1.40
5823 7409 3.366052 AACCCGAGAATGCCACTAAAT 57.634 42.857 0.00 0.00 0.00 1.40
5824 7410 2.871096 AACCCGAGAATGCCACTAAA 57.129 45.000 0.00 0.00 0.00 1.85
5825 7411 3.985019 TTAACCCGAGAATGCCACTAA 57.015 42.857 0.00 0.00 0.00 2.24
5826 7412 3.985019 TTTAACCCGAGAATGCCACTA 57.015 42.857 0.00 0.00 0.00 2.74
5827 7413 2.871096 TTTAACCCGAGAATGCCACT 57.129 45.000 0.00 0.00 0.00 4.00
5828 7414 4.450082 AAATTTAACCCGAGAATGCCAC 57.550 40.909 0.00 0.00 0.00 5.01
5829 7415 5.245075 AGAAAAATTTAACCCGAGAATGCCA 59.755 36.000 0.00 0.00 0.00 4.92
5830 7416 5.720202 AGAAAAATTTAACCCGAGAATGCC 58.280 37.500 0.00 0.00 0.00 4.40
5831 7417 7.652300 AAAGAAAAATTTAACCCGAGAATGC 57.348 32.000 0.00 0.00 0.00 3.56
5836 7422 9.353999 CCTGATTAAAGAAAAATTTAACCCGAG 57.646 33.333 0.00 0.00 37.43 4.63
5837 7423 8.308207 CCCTGATTAAAGAAAAATTTAACCCGA 58.692 33.333 0.00 0.00 37.43 5.14
5838 7424 8.092068 ACCCTGATTAAAGAAAAATTTAACCCG 58.908 33.333 0.00 0.00 37.43 5.28
5862 7448 1.832366 GAAGAAGTGGGAGGGAGTACC 59.168 57.143 0.00 0.00 40.67 3.34
5863 7449 1.832366 GGAAGAAGTGGGAGGGAGTAC 59.168 57.143 0.00 0.00 0.00 2.73
5864 7450 1.273666 GGGAAGAAGTGGGAGGGAGTA 60.274 57.143 0.00 0.00 0.00 2.59
5865 7451 0.547954 GGGAAGAAGTGGGAGGGAGT 60.548 60.000 0.00 0.00 0.00 3.85
5866 7452 1.275421 GGGGAAGAAGTGGGAGGGAG 61.275 65.000 0.00 0.00 0.00 4.30
5867 7453 1.229853 GGGGAAGAAGTGGGAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
5868 7454 1.140134 TTGGGGAAGAAGTGGGAGGG 61.140 60.000 0.00 0.00 0.00 4.30
5869 7455 0.777446 TTTGGGGAAGAAGTGGGAGG 59.223 55.000 0.00 0.00 0.00 4.30
5870 7456 2.310052 AGATTTGGGGAAGAAGTGGGAG 59.690 50.000 0.00 0.00 0.00 4.30
5871 7457 2.358258 AGATTTGGGGAAGAAGTGGGA 58.642 47.619 0.00 0.00 0.00 4.37
5872 7458 2.907458 AGATTTGGGGAAGAAGTGGG 57.093 50.000 0.00 0.00 0.00 4.61
5873 7459 4.098501 GCATAAGATTTGGGGAAGAAGTGG 59.901 45.833 0.00 0.00 0.00 4.00
5874 7460 4.201950 CGCATAAGATTTGGGGAAGAAGTG 60.202 45.833 0.00 0.00 0.00 3.16
5875 7461 3.947834 CGCATAAGATTTGGGGAAGAAGT 59.052 43.478 0.00 0.00 0.00 3.01
5876 7462 3.947834 ACGCATAAGATTTGGGGAAGAAG 59.052 43.478 0.00 0.00 0.00 2.85
5877 7463 3.963129 ACGCATAAGATTTGGGGAAGAA 58.037 40.909 0.00 0.00 0.00 2.52
5878 7464 3.644966 ACGCATAAGATTTGGGGAAGA 57.355 42.857 0.00 0.00 0.00 2.87
5879 7465 4.399303 AGAAACGCATAAGATTTGGGGAAG 59.601 41.667 0.00 0.00 0.00 3.46
5880 7466 4.340617 AGAAACGCATAAGATTTGGGGAA 58.659 39.130 0.00 0.00 0.00 3.97
5881 7467 3.963129 AGAAACGCATAAGATTTGGGGA 58.037 40.909 0.00 0.00 0.00 4.81
5882 7468 4.261197 GCTAGAAACGCATAAGATTTGGGG 60.261 45.833 0.00 0.00 0.00 4.96
5883 7469 4.335315 TGCTAGAAACGCATAAGATTTGGG 59.665 41.667 0.00 0.00 31.40 4.12
5884 7470 5.484173 TGCTAGAAACGCATAAGATTTGG 57.516 39.130 0.00 0.00 31.40 3.28
5885 7471 8.076714 TCTATGCTAGAAACGCATAAGATTTG 57.923 34.615 6.24 0.00 46.27 2.32
5886 7472 8.662781 TTCTATGCTAGAAACGCATAAGATTT 57.337 30.769 6.24 0.00 46.27 2.17
5887 7473 7.095439 GCTTCTATGCTAGAAACGCATAAGATT 60.095 37.037 10.17 0.00 46.27 2.40
5888 7474 6.367422 GCTTCTATGCTAGAAACGCATAAGAT 59.633 38.462 10.17 0.00 46.27 2.40
5889 7475 5.692204 GCTTCTATGCTAGAAACGCATAAGA 59.308 40.000 10.17 6.13 46.27 2.10
5890 7476 5.463392 TGCTTCTATGCTAGAAACGCATAAG 59.537 40.000 11.96 5.10 46.27 1.73
5891 7477 5.356426 TGCTTCTATGCTAGAAACGCATAA 58.644 37.500 11.96 0.00 46.27 1.90
5892 7478 4.944048 TGCTTCTATGCTAGAAACGCATA 58.056 39.130 11.96 4.85 45.57 3.14
5894 7480 3.190079 CTGCTTCTATGCTAGAAACGCA 58.810 45.455 13.79 13.79 43.63 5.24
5895 7481 3.000724 CACTGCTTCTATGCTAGAAACGC 59.999 47.826 0.00 7.94 43.63 4.84
5896 7482 3.553511 CCACTGCTTCTATGCTAGAAACG 59.446 47.826 0.00 0.00 43.63 3.60
5897 7483 3.311048 GCCACTGCTTCTATGCTAGAAAC 59.689 47.826 0.00 4.24 43.63 2.78
5898 7484 3.535561 GCCACTGCTTCTATGCTAGAAA 58.464 45.455 0.00 0.00 43.63 2.52
5899 7485 2.481969 CGCCACTGCTTCTATGCTAGAA 60.482 50.000 0.00 5.78 42.19 2.10
5900 7486 1.067669 CGCCACTGCTTCTATGCTAGA 59.932 52.381 0.00 0.00 34.43 2.43
5901 7487 1.495878 CGCCACTGCTTCTATGCTAG 58.504 55.000 0.00 0.00 34.43 3.42
5902 7488 0.104855 CCGCCACTGCTTCTATGCTA 59.895 55.000 0.00 0.00 34.43 3.49
5903 7489 1.153289 CCGCCACTGCTTCTATGCT 60.153 57.895 0.00 0.00 34.43 3.79
5904 7490 1.153369 TCCGCCACTGCTTCTATGC 60.153 57.895 0.00 0.00 34.43 3.14
5905 7491 0.531532 CCTCCGCCACTGCTTCTATG 60.532 60.000 0.00 0.00 34.43 2.23
5906 7492 1.826024 CCTCCGCCACTGCTTCTAT 59.174 57.895 0.00 0.00 34.43 1.98
5907 7493 3.019003 GCCTCCGCCACTGCTTCTA 62.019 63.158 0.00 0.00 34.43 2.10
5908 7494 4.400961 GCCTCCGCCACTGCTTCT 62.401 66.667 0.00 0.00 34.43 2.85
5909 7495 4.704833 TGCCTCCGCCACTGCTTC 62.705 66.667 0.00 0.00 34.43 3.86
5910 7496 4.711949 CTGCCTCCGCCACTGCTT 62.712 66.667 0.00 0.00 34.43 3.91
5913 7499 4.020617 TTCCTGCCTCCGCCACTG 62.021 66.667 0.00 0.00 0.00 3.66
5914 7500 4.021925 GTTCCTGCCTCCGCCACT 62.022 66.667 0.00 0.00 0.00 4.00
5915 7501 3.959991 GAGTTCCTGCCTCCGCCAC 62.960 68.421 0.00 0.00 0.00 5.01
5916 7502 3.706373 GAGTTCCTGCCTCCGCCA 61.706 66.667 0.00 0.00 0.00 5.69
5917 7503 4.475135 GGAGTTCCTGCCTCCGCC 62.475 72.222 0.00 0.00 39.22 6.13
5921 7507 2.568623 TTTTCTGGAGTTCCTGCCTC 57.431 50.000 0.00 0.00 36.82 4.70
5922 7508 2.616510 CGATTTTCTGGAGTTCCTGCCT 60.617 50.000 0.00 0.00 36.82 4.75
5923 7509 1.740025 CGATTTTCTGGAGTTCCTGCC 59.260 52.381 0.00 0.00 36.82 4.85
5924 7510 2.675348 CTCGATTTTCTGGAGTTCCTGC 59.325 50.000 0.00 0.00 36.82 4.85
5925 7511 3.265791 CCTCGATTTTCTGGAGTTCCTG 58.734 50.000 0.00 0.00 36.82 3.86
5926 7512 2.907042 ACCTCGATTTTCTGGAGTTCCT 59.093 45.455 0.00 0.00 36.82 3.36
5927 7513 3.336138 ACCTCGATTTTCTGGAGTTCC 57.664 47.619 0.00 0.00 0.00 3.62
5928 7514 3.437049 CCAACCTCGATTTTCTGGAGTTC 59.563 47.826 0.00 0.00 0.00 3.01
5929 7515 3.412386 CCAACCTCGATTTTCTGGAGTT 58.588 45.455 0.00 0.00 0.00 3.01
5930 7516 2.290323 CCCAACCTCGATTTTCTGGAGT 60.290 50.000 0.00 0.00 0.00 3.85
5931 7517 2.359900 CCCAACCTCGATTTTCTGGAG 58.640 52.381 0.00 0.00 0.00 3.86
5932 7518 1.004277 CCCCAACCTCGATTTTCTGGA 59.996 52.381 0.00 0.00 0.00 3.86
5933 7519 1.463674 CCCCAACCTCGATTTTCTGG 58.536 55.000 0.00 0.00 0.00 3.86
5934 7520 1.271926 ACCCCCAACCTCGATTTTCTG 60.272 52.381 0.00 0.00 0.00 3.02
5935 7521 1.073098 ACCCCCAACCTCGATTTTCT 58.927 50.000 0.00 0.00 0.00 2.52
5936 7522 1.173913 CACCCCCAACCTCGATTTTC 58.826 55.000 0.00 0.00 0.00 2.29
5937 7523 0.251608 CCACCCCCAACCTCGATTTT 60.252 55.000 0.00 0.00 0.00 1.82
5938 7524 1.382629 CCACCCCCAACCTCGATTT 59.617 57.895 0.00 0.00 0.00 2.17
5939 7525 2.612493 CCCACCCCCAACCTCGATT 61.612 63.158 0.00 0.00 0.00 3.34
5940 7526 3.015145 CCCACCCCCAACCTCGAT 61.015 66.667 0.00 0.00 0.00 3.59
5957 7543 1.837439 CCCCTTTTTCATTAAGCCCCC 59.163 52.381 0.00 0.00 0.00 5.40
5958 7544 2.827755 TCCCCTTTTTCATTAAGCCCC 58.172 47.619 0.00 0.00 0.00 5.80
5959 7545 4.901197 TTTCCCCTTTTTCATTAAGCCC 57.099 40.909 0.00 0.00 0.00 5.19
5988 7574 9.185192 GCTTTTCCATGTATAATTACAATGAGC 57.815 33.333 0.00 3.88 41.51 4.26
5997 7583 9.976511 CATGATCTTGCTTTTCCATGTATAATT 57.023 29.630 0.00 0.00 0.00 1.40
5998 7584 8.582437 CCATGATCTTGCTTTTCCATGTATAAT 58.418 33.333 3.07 0.00 32.01 1.28
5999 7585 7.014518 CCCATGATCTTGCTTTTCCATGTATAA 59.985 37.037 3.07 0.00 32.01 0.98
6000 7586 6.491062 CCCATGATCTTGCTTTTCCATGTATA 59.509 38.462 3.07 0.00 32.01 1.47
6001 7587 5.303589 CCCATGATCTTGCTTTTCCATGTAT 59.696 40.000 3.07 0.00 32.01 2.29
6002 7588 4.646040 CCCATGATCTTGCTTTTCCATGTA 59.354 41.667 3.07 0.00 32.01 2.29
6003 7589 3.449737 CCCATGATCTTGCTTTTCCATGT 59.550 43.478 3.07 0.00 32.01 3.21
6004 7590 3.181469 CCCCATGATCTTGCTTTTCCATG 60.181 47.826 3.07 0.00 33.28 3.66
6005 7591 3.036091 CCCCATGATCTTGCTTTTCCAT 58.964 45.455 3.07 0.00 0.00 3.41
6006 7592 2.459644 CCCCATGATCTTGCTTTTCCA 58.540 47.619 3.07 0.00 0.00 3.53
6007 7593 1.137675 GCCCCATGATCTTGCTTTTCC 59.862 52.381 3.07 0.00 0.00 3.13
6008 7594 1.202336 CGCCCCATGATCTTGCTTTTC 60.202 52.381 3.07 0.00 0.00 2.29
6009 7595 0.819582 CGCCCCATGATCTTGCTTTT 59.180 50.000 3.07 0.00 0.00 2.27
6010 7596 1.039233 CCGCCCCATGATCTTGCTTT 61.039 55.000 3.07 0.00 0.00 3.51
6011 7597 1.454479 CCGCCCCATGATCTTGCTT 60.454 57.895 3.07 0.00 0.00 3.91
6012 7598 2.194056 CCGCCCCATGATCTTGCT 59.806 61.111 3.07 0.00 0.00 3.91
6013 7599 2.908940 CCCGCCCCATGATCTTGC 60.909 66.667 3.07 0.00 0.00 4.01
6014 7600 2.908940 GCCCGCCCCATGATCTTG 60.909 66.667 0.00 1.60 0.00 3.02
6015 7601 4.209866 GGCCCGCCCCATGATCTT 62.210 66.667 0.00 0.00 0.00 2.40
6017 7603 4.290622 ATGGCCCGCCCCATGATC 62.291 66.667 0.00 0.00 43.80 2.92
6081 7667 1.060122 GCATTTTTGATGCGCAGAAGC 59.940 47.619 18.32 7.15 35.17 3.86
6096 7682 7.806409 AAGAGTTGGCATTTAAAAAGCATTT 57.194 28.000 15.23 0.00 42.41 2.32
6097 7683 7.806409 AAAGAGTTGGCATTTAAAAAGCATT 57.194 28.000 15.23 1.36 0.00 3.56
6098 7684 7.806409 AAAAGAGTTGGCATTTAAAAAGCAT 57.194 28.000 15.23 1.85 0.00 3.79
6099 7685 7.622893 AAAAAGAGTTGGCATTTAAAAAGCA 57.377 28.000 15.23 2.65 0.00 3.91
6100 7686 9.995957 TTTAAAAAGAGTTGGCATTTAAAAAGC 57.004 25.926 10.24 7.30 34.38 3.51
6127 7713 5.104982 AGTGTGACATGAACCCAACATTTTT 60.105 36.000 0.00 0.00 0.00 1.94
6128 7714 4.405358 AGTGTGACATGAACCCAACATTTT 59.595 37.500 0.00 0.00 0.00 1.82
6129 7715 3.960102 AGTGTGACATGAACCCAACATTT 59.040 39.130 0.00 0.00 0.00 2.32
6130 7716 3.565307 AGTGTGACATGAACCCAACATT 58.435 40.909 0.00 0.00 0.00 2.71
6131 7717 3.149196 GAGTGTGACATGAACCCAACAT 58.851 45.455 0.00 0.00 0.00 2.71
6132 7718 2.571212 GAGTGTGACATGAACCCAACA 58.429 47.619 0.00 0.00 0.00 3.33
6133 7719 1.531149 CGAGTGTGACATGAACCCAAC 59.469 52.381 0.00 0.00 0.00 3.77
6134 7720 1.414550 TCGAGTGTGACATGAACCCAA 59.585 47.619 0.00 0.00 0.00 4.12
6135 7721 1.044611 TCGAGTGTGACATGAACCCA 58.955 50.000 0.00 0.00 0.00 4.51
6136 7722 2.163818 TTCGAGTGTGACATGAACCC 57.836 50.000 0.00 0.00 0.00 4.11
6137 7723 2.159653 GCATTCGAGTGTGACATGAACC 60.160 50.000 9.83 0.00 0.00 3.62
6138 7724 2.738846 AGCATTCGAGTGTGACATGAAC 59.261 45.455 9.83 0.00 0.00 3.18
6139 7725 3.044235 AGCATTCGAGTGTGACATGAA 57.956 42.857 9.83 0.00 0.00 2.57
6140 7726 2.749280 AGCATTCGAGTGTGACATGA 57.251 45.000 9.83 0.00 0.00 3.07
6141 7727 4.926860 TTTAGCATTCGAGTGTGACATG 57.073 40.909 9.83 0.00 0.00 3.21
6142 7728 5.470098 AGTTTTTAGCATTCGAGTGTGACAT 59.530 36.000 9.83 0.00 0.00 3.06
6143 7729 4.814234 AGTTTTTAGCATTCGAGTGTGACA 59.186 37.500 9.83 0.00 0.00 3.58
6144 7730 5.344207 AGTTTTTAGCATTCGAGTGTGAC 57.656 39.130 9.83 0.77 0.00 3.67
6145 7731 7.485418 TTAAGTTTTTAGCATTCGAGTGTGA 57.515 32.000 9.83 0.00 0.00 3.58
6146 7732 8.015087 TGATTAAGTTTTTAGCATTCGAGTGTG 58.985 33.333 9.83 0.19 0.00 3.82
6147 7733 8.094798 TGATTAAGTTTTTAGCATTCGAGTGT 57.905 30.769 9.83 0.00 0.00 3.55
6148 7734 9.559958 AATGATTAAGTTTTTAGCATTCGAGTG 57.440 29.630 3.12 3.12 0.00 3.51
6188 7774 8.999220 AACATTTGGCATTCAAAATTGTTTTT 57.001 23.077 0.00 0.00 46.93 1.94
6189 7775 9.513727 GTAACATTTGGCATTCAAAATTGTTTT 57.486 25.926 12.54 0.00 46.93 2.43
6190 7776 7.854916 CGTAACATTTGGCATTCAAAATTGTTT 59.145 29.630 12.54 2.86 46.93 2.83
6191 7777 7.351223 CGTAACATTTGGCATTCAAAATTGTT 58.649 30.769 12.17 12.17 46.93 2.83
6192 7778 6.565623 GCGTAACATTTGGCATTCAAAATTGT 60.566 34.615 0.00 0.00 46.93 2.71
6193 7779 5.789512 GCGTAACATTTGGCATTCAAAATTG 59.210 36.000 0.00 0.00 46.93 2.32
6194 7780 5.700373 AGCGTAACATTTGGCATTCAAAATT 59.300 32.000 0.00 0.00 46.93 1.82
6195 7781 5.237048 AGCGTAACATTTGGCATTCAAAAT 58.763 33.333 0.00 0.00 46.93 1.82
6196 7782 4.626042 AGCGTAACATTTGGCATTCAAAA 58.374 34.783 0.00 0.00 46.93 2.44
6198 7784 3.932545 AGCGTAACATTTGGCATTCAA 57.067 38.095 0.00 0.00 0.00 2.69
6199 7785 3.505680 AGAAGCGTAACATTTGGCATTCA 59.494 39.130 0.00 0.00 0.00 2.57
6200 7786 4.096732 AGAAGCGTAACATTTGGCATTC 57.903 40.909 0.00 0.00 0.00 2.67
6201 7787 4.519540 AAGAAGCGTAACATTTGGCATT 57.480 36.364 0.00 0.00 0.00 3.56
6202 7788 4.519540 AAAGAAGCGTAACATTTGGCAT 57.480 36.364 0.00 0.00 0.00 4.40
6203 7789 4.314740 AAAAGAAGCGTAACATTTGGCA 57.685 36.364 0.00 0.00 0.00 4.92
6222 7808 6.183360 GGATAACAGTGCTTCGTCGATAAAAA 60.183 38.462 0.00 0.00 0.00 1.94
6223 7809 5.290158 GGATAACAGTGCTTCGTCGATAAAA 59.710 40.000 0.00 0.00 0.00 1.52
6224 7810 4.802039 GGATAACAGTGCTTCGTCGATAAA 59.198 41.667 0.00 0.00 0.00 1.40
6225 7811 4.357142 GGATAACAGTGCTTCGTCGATAA 58.643 43.478 0.00 0.00 0.00 1.75
6226 7812 3.243301 GGGATAACAGTGCTTCGTCGATA 60.243 47.826 0.00 0.00 0.00 2.92
6227 7813 2.481449 GGGATAACAGTGCTTCGTCGAT 60.481 50.000 0.00 0.00 0.00 3.59
6228 7814 1.135199 GGGATAACAGTGCTTCGTCGA 60.135 52.381 0.00 0.00 0.00 4.20
6229 7815 1.135083 AGGGATAACAGTGCTTCGTCG 60.135 52.381 0.00 0.00 0.00 5.12
6230 7816 2.674796 AGGGATAACAGTGCTTCGTC 57.325 50.000 0.00 0.00 0.00 4.20
6231 7817 3.418684 AAAGGGATAACAGTGCTTCGT 57.581 42.857 0.00 0.00 0.00 3.85
6232 7818 3.127030 GGAAAAGGGATAACAGTGCTTCG 59.873 47.826 0.00 0.00 0.00 3.79
6233 7819 4.079253 TGGAAAAGGGATAACAGTGCTTC 58.921 43.478 0.00 0.00 0.00 3.86
6234 7820 4.112634 TGGAAAAGGGATAACAGTGCTT 57.887 40.909 0.00 0.00 0.00 3.91
6235 7821 3.806949 TGGAAAAGGGATAACAGTGCT 57.193 42.857 0.00 0.00 0.00 4.40
6236 7822 4.462483 TGAATGGAAAAGGGATAACAGTGC 59.538 41.667 0.00 0.00 0.00 4.40
6237 7823 6.588719 TTGAATGGAAAAGGGATAACAGTG 57.411 37.500 0.00 0.00 0.00 3.66
6238 7824 7.610580 TTTTGAATGGAAAAGGGATAACAGT 57.389 32.000 0.00 0.00 0.00 3.55
6239 7825 8.938906 CAATTTTGAATGGAAAAGGGATAACAG 58.061 33.333 0.00 0.00 0.00 3.16
6240 7826 8.435982 ACAATTTTGAATGGAAAAGGGATAACA 58.564 29.630 0.00 0.00 0.00 2.41
6241 7827 8.846943 ACAATTTTGAATGGAAAAGGGATAAC 57.153 30.769 0.00 0.00 0.00 1.89
6242 7828 8.654997 TGACAATTTTGAATGGAAAAGGGATAA 58.345 29.630 0.00 0.00 0.00 1.75
6243 7829 8.200024 TGACAATTTTGAATGGAAAAGGGATA 57.800 30.769 0.00 0.00 0.00 2.59
6244 7830 7.077050 TGACAATTTTGAATGGAAAAGGGAT 57.923 32.000 0.00 0.00 0.00 3.85
6245 7831 6.491714 TGACAATTTTGAATGGAAAAGGGA 57.508 33.333 0.00 0.00 0.00 4.20
6246 7832 6.293571 GCTTGACAATTTTGAATGGAAAAGGG 60.294 38.462 0.00 0.00 0.00 3.95
6247 7833 6.260493 TGCTTGACAATTTTGAATGGAAAAGG 59.740 34.615 0.00 0.00 0.00 3.11
6248 7834 7.127686 GTGCTTGACAATTTTGAATGGAAAAG 58.872 34.615 0.00 0.00 0.00 2.27
6249 7835 6.238049 CGTGCTTGACAATTTTGAATGGAAAA 60.238 34.615 0.00 0.00 0.00 2.29
6250 7836 5.233902 CGTGCTTGACAATTTTGAATGGAAA 59.766 36.000 0.00 0.00 0.00 3.13
6251 7837 4.744137 CGTGCTTGACAATTTTGAATGGAA 59.256 37.500 0.00 0.00 0.00 3.53
6252 7838 4.297510 CGTGCTTGACAATTTTGAATGGA 58.702 39.130 0.00 0.00 0.00 3.41
6253 7839 3.120923 GCGTGCTTGACAATTTTGAATGG 60.121 43.478 0.00 0.00 0.00 3.16
6254 7840 3.737266 AGCGTGCTTGACAATTTTGAATG 59.263 39.130 0.00 0.00 0.00 2.67
6255 7841 3.981211 AGCGTGCTTGACAATTTTGAAT 58.019 36.364 0.00 0.00 0.00 2.57
6256 7842 3.435105 AGCGTGCTTGACAATTTTGAA 57.565 38.095 0.00 0.00 0.00 2.69
6257 7843 3.435105 AAGCGTGCTTGACAATTTTGA 57.565 38.095 6.25 0.00 34.60 2.69
6268 7854 3.199677 TGTTAGTGTAACAAGCGTGCTT 58.800 40.909 0.24 0.24 44.95 3.91
6269 7855 2.828877 TGTTAGTGTAACAAGCGTGCT 58.171 42.857 0.00 0.00 44.95 4.40
6277 7863 8.198778 TGTGTAGATGTTCTTGTTAGTGTAACA 58.801 33.333 0.00 0.00 46.13 2.41
6278 7864 8.485591 GTGTGTAGATGTTCTTGTTAGTGTAAC 58.514 37.037 0.00 0.00 39.11 2.50
6279 7865 7.380333 CGTGTGTAGATGTTCTTGTTAGTGTAA 59.620 37.037 0.00 0.00 0.00 2.41
6280 7866 6.859508 CGTGTGTAGATGTTCTTGTTAGTGTA 59.140 38.462 0.00 0.00 0.00 2.90
6281 7867 5.690409 CGTGTGTAGATGTTCTTGTTAGTGT 59.310 40.000 0.00 0.00 0.00 3.55
6282 7868 5.918576 TCGTGTGTAGATGTTCTTGTTAGTG 59.081 40.000 0.00 0.00 0.00 2.74
6283 7869 6.080648 TCGTGTGTAGATGTTCTTGTTAGT 57.919 37.500 0.00 0.00 0.00 2.24
6284 7870 7.402811 TTTCGTGTGTAGATGTTCTTGTTAG 57.597 36.000 0.00 0.00 0.00 2.34
6285 7871 7.117236 GGATTTCGTGTGTAGATGTTCTTGTTA 59.883 37.037 0.00 0.00 0.00 2.41
6286 7872 6.073222 GGATTTCGTGTGTAGATGTTCTTGTT 60.073 38.462 0.00 0.00 0.00 2.83
6287 7873 5.408604 GGATTTCGTGTGTAGATGTTCTTGT 59.591 40.000 0.00 0.00 0.00 3.16
6288 7874 5.408299 TGGATTTCGTGTGTAGATGTTCTTG 59.592 40.000 0.00 0.00 0.00 3.02
6289 7875 5.408604 GTGGATTTCGTGTGTAGATGTTCTT 59.591 40.000 0.00 0.00 0.00 2.52
6290 7876 4.929808 GTGGATTTCGTGTGTAGATGTTCT 59.070 41.667 0.00 0.00 0.00 3.01
6291 7877 4.929808 AGTGGATTTCGTGTGTAGATGTTC 59.070 41.667 0.00 0.00 0.00 3.18
6292 7878 4.894784 AGTGGATTTCGTGTGTAGATGTT 58.105 39.130 0.00 0.00 0.00 2.71
6293 7879 4.537135 AGTGGATTTCGTGTGTAGATGT 57.463 40.909 0.00 0.00 0.00 3.06
6294 7880 5.862924 AAAGTGGATTTCGTGTGTAGATG 57.137 39.130 0.00 0.00 0.00 2.90
6295 7881 6.877611 AAAAAGTGGATTTCGTGTGTAGAT 57.122 33.333 0.00 0.00 0.00 1.98
6296 7882 7.789273 TTAAAAAGTGGATTTCGTGTGTAGA 57.211 32.000 0.00 0.00 0.00 2.59
6297 7883 8.844441 TTTTAAAAAGTGGATTTCGTGTGTAG 57.156 30.769 0.00 0.00 0.00 2.74
6298 7884 9.804758 AATTTTAAAAAGTGGATTTCGTGTGTA 57.195 25.926 4.44 0.00 0.00 2.90
6299 7885 8.710835 AATTTTAAAAAGTGGATTTCGTGTGT 57.289 26.923 4.44 0.00 0.00 3.72
6300 7886 9.980780 AAAATTTTAAAAAGTGGATTTCGTGTG 57.019 25.926 4.44 0.00 0.00 3.82
6337 7923 9.787532 CGGATGAACAGTAAATTCAAAATATGT 57.212 29.630 0.00 0.00 39.43 2.29
6341 7927 9.757227 TTTTCGGATGAACAGTAAATTCAAAAT 57.243 25.926 0.00 0.00 39.43 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.