Multiple sequence alignment - TraesCS1A01G331900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G331900 chr1A 100.000 6937 0 0 1 6937 520585639 520578703 0.000000e+00 12811.0
1 TraesCS1A01G331900 chr1A 98.611 144 2 0 1 144 528707584 528707441 8.930000e-64 255.0
2 TraesCS1A01G331900 chr1A 75.187 536 72 30 3190 3715 546035277 546034793 5.490000e-46 196.0
3 TraesCS1A01G331900 chr1D 92.167 3498 167 37 2988 6439 424739537 424736101 0.000000e+00 4843.0
4 TraesCS1A01G331900 chr1D 94.685 1223 53 5 1782 3000 424742941 424741727 0.000000e+00 1888.0
5 TraesCS1A01G331900 chr1D 93.299 985 26 16 782 1747 424743907 424742944 0.000000e+00 1417.0
6 TraesCS1A01G331900 chr1D 93.148 467 16 5 6485 6937 424735256 424734792 0.000000e+00 671.0
7 TraesCS1A01G331900 chr1D 84.181 531 48 8 140 636 424744544 424744016 3.760000e-132 483.0
8 TraesCS1A01G331900 chr1B 92.186 2841 130 41 851 3653 573876420 573873634 0.000000e+00 3932.0
9 TraesCS1A01G331900 chr1B 89.453 1991 130 36 4207 6153 573872233 573870279 0.000000e+00 2440.0
10 TraesCS1A01G331900 chr1B 89.041 438 32 10 6486 6913 573863466 573863035 4.760000e-146 529.0
11 TraesCS1A01G331900 chr1B 86.078 510 44 9 3646 4130 573872752 573872245 2.220000e-144 523.0
12 TraesCS1A01G331900 chr1B 90.845 142 12 1 492 632 573876776 573876635 9.190000e-44 189.0
13 TraesCS1A01G331900 chr1B 90.909 55 1 2 6158 6212 573870194 573870144 3.470000e-08 71.3
14 TraesCS1A01G331900 chr1B 92.683 41 3 0 742 782 573876620 573876580 7.510000e-05 60.2
15 TraesCS1A01G331900 chr2B 94.463 307 16 1 1386 1692 380576996 380576691 8.140000e-129 472.0
16 TraesCS1A01G331900 chr2B 88.624 378 39 3 4442 4816 65374037 65373661 2.280000e-124 457.0
17 TraesCS1A01G331900 chr2B 88.172 279 21 7 1698 1974 380575438 380575170 8.680000e-84 322.0
18 TraesCS1A01G331900 chr2D 88.831 385 37 5 4434 4815 380416545 380416926 1.050000e-127 468.0
19 TraesCS1A01G331900 chr2D 89.067 375 37 3 4442 4813 388833686 388834059 4.900000e-126 462.0
20 TraesCS1A01G331900 chr2D 86.047 86 11 1 3181 3266 348618389 348618305 2.660000e-14 91.6
21 TraesCS1A01G331900 chr2D 97.436 39 0 1 267 305 11300820 11300857 1.620000e-06 65.8
22 TraesCS1A01G331900 chr5D 88.684 380 37 6 4442 4816 360541880 360542258 6.340000e-125 459.0
23 TraesCS1A01G331900 chr4B 88.421 380 39 4 4442 4816 252007351 252007730 2.950000e-123 453.0
24 TraesCS1A01G331900 chr4B 77.451 204 34 8 3181 3381 2707658 2707464 2.050000e-20 111.0
25 TraesCS1A01G331900 chr4B 89.583 48 3 2 272 318 472202114 472202160 7.510000e-05 60.2
26 TraesCS1A01G331900 chr5B 88.360 378 40 3 4442 4816 192866751 192866375 1.060000e-122 451.0
27 TraesCS1A01G331900 chr2A 88.052 385 40 5 4434 4815 515951659 515952040 1.060000e-122 451.0
28 TraesCS1A01G331900 chr2A 98.000 150 3 0 1 150 566001955 566002104 1.920000e-65 261.0
29 TraesCS1A01G331900 chr2A 98.621 145 2 0 1 145 467489516 467489660 2.480000e-64 257.0
30 TraesCS1A01G331900 chr2A 98.611 144 2 0 1 144 670862026 670862169 8.930000e-64 255.0
31 TraesCS1A01G331900 chr2A 96.732 153 3 2 1 151 533670400 533670248 3.210000e-63 254.0
32 TraesCS1A01G331900 chr7B 90.879 307 16 7 1386 1692 746734179 746733885 1.080000e-107 401.0
33 TraesCS1A01G331900 chr3A 75.345 653 122 31 1046 1684 534185093 534184466 1.910000e-70 278.0
34 TraesCS1A01G331900 chr3D 75.447 615 117 25 1069 1678 416211052 416211637 1.150000e-67 268.0
35 TraesCS1A01G331900 chr7A 98.611 144 2 0 1 144 699116133 699116276 8.930000e-64 255.0
36 TraesCS1A01G331900 chr6A 97.959 147 2 1 1 146 383460938 383461084 3.210000e-63 254.0
37 TraesCS1A01G331900 chr4A 98.571 140 2 0 1 140 336773057 336773196 1.490000e-61 248.0
38 TraesCS1A01G331900 chr5A 94.375 160 8 1 1 159 243053886 243053727 1.930000e-60 244.0
39 TraesCS1A01G331900 chr5A 78.689 183 29 7 3164 3344 663390213 663390387 5.690000e-21 113.0
40 TraesCS1A01G331900 chr7D 79.197 274 46 7 1410 1678 6439337 6439604 5.530000e-41 180.0
41 TraesCS1A01G331900 chr3B 86.458 96 12 1 3171 3266 522328745 522328651 3.420000e-18 104.0
42 TraesCS1A01G331900 chr6B 82.609 92 15 1 637 727 625803549 625803640 5.770000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G331900 chr1A 520578703 520585639 6936 True 12811.000000 12811 100.0000 1 6937 1 chr1A.!!$R1 6936
1 TraesCS1A01G331900 chr1D 424734792 424744544 9752 True 1860.400000 4843 91.4960 140 6937 5 chr1D.!!$R1 6797
2 TraesCS1A01G331900 chr1B 573870144 573876776 6632 True 1202.583333 3932 90.3590 492 6212 6 chr1B.!!$R2 5720
3 TraesCS1A01G331900 chr2B 380575170 380576996 1826 True 397.000000 472 91.3175 1386 1974 2 chr2B.!!$R2 588
4 TraesCS1A01G331900 chr3A 534184466 534185093 627 True 278.000000 278 75.3450 1046 1684 1 chr3A.!!$R1 638
5 TraesCS1A01G331900 chr3D 416211052 416211637 585 False 268.000000 268 75.4470 1069 1678 1 chr3D.!!$F1 609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
206 208 0.171903 AGCGCTTTGATCCATTGCAC 59.828 50.0 2.64 0.00 0.00 4.57 F
1030 1154 0.038343 GCTCAGCATCGATCCTCCTC 60.038 60.0 0.00 0.00 0.00 3.71 F
1774 3156 0.033504 GGTCTCAGTTTCAGTGCGGA 59.966 55.0 0.00 0.00 0.00 5.54 F
3263 6883 0.306533 CCGTTCCTGTGTTTGGTTCG 59.693 55.0 0.00 0.00 0.00 3.95 F
3990 8543 0.251121 TTGCTCTTGGCCAAATCGGA 60.251 50.0 20.91 12.19 40.92 4.55 F
4437 9010 0.321298 GTTTCGCTTCAGGTGGCCTA 60.321 55.0 3.32 0.00 29.64 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1731 3113 0.732571 CGTCCACCCATTTCATTCCG 59.267 55.0 0.00 0.00 0.00 4.30 R
2355 3740 0.107703 TCTGCAGCAATAGGGGAACG 60.108 55.0 9.47 0.00 0.00 3.95 R
3331 6952 0.168128 GGCGACCTGAACCAAATTCG 59.832 55.0 0.00 0.00 40.56 3.34 R
4111 8664 0.392193 CAGATGGAAAGAGCAGCGGT 60.392 55.0 0.00 0.00 0.00 5.68 R
5886 10487 0.683828 CCTGCACCATTATGCCCACA 60.684 55.0 0.00 0.00 45.50 4.17 R
6275 10978 0.099968 CCGGTGATCACATACGACGT 59.900 55.0 26.47 5.52 33.46 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.437213 TCATCTCTGGTAGGAAAACCGA 58.563 45.455 0.00 0.00 42.91 4.69
22 23 3.835978 TCATCTCTGGTAGGAAAACCGAA 59.164 43.478 0.00 0.00 42.91 4.30
23 24 4.469945 TCATCTCTGGTAGGAAAACCGAAT 59.530 41.667 0.00 0.00 42.91 3.34
24 25 4.467198 TCTCTGGTAGGAAAACCGAATC 57.533 45.455 0.00 0.00 42.91 2.52
25 26 3.835978 TCTCTGGTAGGAAAACCGAATCA 59.164 43.478 0.00 0.00 42.91 2.57
26 27 4.285003 TCTCTGGTAGGAAAACCGAATCAA 59.715 41.667 0.00 0.00 42.91 2.57
27 28 5.045869 TCTCTGGTAGGAAAACCGAATCAAT 60.046 40.000 0.00 0.00 42.91 2.57
28 29 4.941263 TCTGGTAGGAAAACCGAATCAATG 59.059 41.667 0.00 0.00 42.91 2.82
29 30 4.912586 TGGTAGGAAAACCGAATCAATGA 58.087 39.130 0.00 0.00 42.91 2.57
30 31 4.941263 TGGTAGGAAAACCGAATCAATGAG 59.059 41.667 0.00 0.00 42.91 2.90
31 32 4.335594 GGTAGGAAAACCGAATCAATGAGG 59.664 45.833 0.00 0.00 0.00 3.86
32 33 3.356290 AGGAAAACCGAATCAATGAGGG 58.644 45.455 0.00 0.00 0.00 4.30
33 34 3.010138 AGGAAAACCGAATCAATGAGGGA 59.990 43.478 5.03 0.00 0.00 4.20
34 35 3.128764 GGAAAACCGAATCAATGAGGGAC 59.871 47.826 5.03 0.00 0.00 4.46
36 37 3.721087 AACCGAATCAATGAGGGACTT 57.279 42.857 5.03 0.00 41.55 3.01
37 38 3.721087 ACCGAATCAATGAGGGACTTT 57.279 42.857 5.03 0.00 41.55 2.66
38 39 4.034285 ACCGAATCAATGAGGGACTTTT 57.966 40.909 5.03 0.00 41.55 2.27
39 40 5.174037 ACCGAATCAATGAGGGACTTTTA 57.826 39.130 5.03 0.00 41.55 1.52
40 41 4.941873 ACCGAATCAATGAGGGACTTTTAC 59.058 41.667 5.03 0.00 41.55 2.01
41 42 4.335594 CCGAATCAATGAGGGACTTTTACC 59.664 45.833 0.00 0.00 41.55 2.85
42 43 5.186198 CGAATCAATGAGGGACTTTTACCT 58.814 41.667 0.00 0.00 41.55 3.08
43 44 5.065218 CGAATCAATGAGGGACTTTTACCTG 59.935 44.000 0.00 0.00 41.55 4.00
44 45 4.993705 TCAATGAGGGACTTTTACCTGT 57.006 40.909 0.00 0.00 41.55 4.00
45 46 4.651778 TCAATGAGGGACTTTTACCTGTG 58.348 43.478 0.00 0.00 41.55 3.66
46 47 4.104102 TCAATGAGGGACTTTTACCTGTGT 59.896 41.667 0.00 0.00 41.55 3.72
47 48 4.724279 ATGAGGGACTTTTACCTGTGTT 57.276 40.909 0.00 0.00 41.55 3.32
48 49 5.836024 ATGAGGGACTTTTACCTGTGTTA 57.164 39.130 0.00 0.00 41.55 2.41
49 50 5.836024 TGAGGGACTTTTACCTGTGTTAT 57.164 39.130 0.00 0.00 41.55 1.89
50 51 5.801380 TGAGGGACTTTTACCTGTGTTATC 58.199 41.667 0.00 0.00 41.55 1.75
51 52 5.175388 AGGGACTTTTACCTGTGTTATCC 57.825 43.478 0.00 0.00 35.30 2.59
52 53 4.850386 AGGGACTTTTACCTGTGTTATCCT 59.150 41.667 0.00 0.00 35.30 3.24
53 54 4.941873 GGGACTTTTACCTGTGTTATCCTG 59.058 45.833 0.00 0.00 0.00 3.86
54 55 4.395231 GGACTTTTACCTGTGTTATCCTGC 59.605 45.833 0.00 0.00 0.00 4.85
55 56 4.980573 ACTTTTACCTGTGTTATCCTGCA 58.019 39.130 0.00 0.00 0.00 4.41
56 57 5.381757 ACTTTTACCTGTGTTATCCTGCAA 58.618 37.500 0.00 0.00 0.00 4.08
57 58 6.010219 ACTTTTACCTGTGTTATCCTGCAAT 58.990 36.000 0.00 0.00 0.00 3.56
58 59 6.493458 ACTTTTACCTGTGTTATCCTGCAATT 59.507 34.615 0.00 0.00 0.00 2.32
59 60 6.509418 TTTACCTGTGTTATCCTGCAATTC 57.491 37.500 0.00 0.00 0.00 2.17
60 61 4.032960 ACCTGTGTTATCCTGCAATTCA 57.967 40.909 0.00 0.00 0.00 2.57
61 62 3.758554 ACCTGTGTTATCCTGCAATTCAC 59.241 43.478 0.00 0.00 0.00 3.18
62 63 3.758023 CCTGTGTTATCCTGCAATTCACA 59.242 43.478 0.00 0.00 34.12 3.58
63 64 4.379813 CCTGTGTTATCCTGCAATTCACAC 60.380 45.833 8.26 8.26 34.83 3.82
64 65 4.140536 TGTGTTATCCTGCAATTCACACA 58.859 39.130 12.19 12.19 40.45 3.72
65 66 4.582240 TGTGTTATCCTGCAATTCACACAA 59.418 37.500 13.31 2.07 39.94 3.33
66 67 5.068329 TGTGTTATCCTGCAATTCACACAAA 59.932 36.000 13.31 0.00 39.94 2.83
67 68 5.402270 GTGTTATCCTGCAATTCACACAAAC 59.598 40.000 9.72 0.00 34.48 2.93
68 69 5.068329 TGTTATCCTGCAATTCACACAAACA 59.932 36.000 0.00 0.00 0.00 2.83
69 70 3.435105 TCCTGCAATTCACACAAACAC 57.565 42.857 0.00 0.00 0.00 3.32
70 71 2.757314 TCCTGCAATTCACACAAACACA 59.243 40.909 0.00 0.00 0.00 3.72
71 72 3.384146 TCCTGCAATTCACACAAACACAT 59.616 39.130 0.00 0.00 0.00 3.21
72 73 4.121317 CCTGCAATTCACACAAACACATT 58.879 39.130 0.00 0.00 0.00 2.71
73 74 5.068329 TCCTGCAATTCACACAAACACATTA 59.932 36.000 0.00 0.00 0.00 1.90
74 75 5.403166 CCTGCAATTCACACAAACACATTAG 59.597 40.000 0.00 0.00 0.00 1.73
75 76 5.900425 TGCAATTCACACAAACACATTAGT 58.100 33.333 0.00 0.00 0.00 2.24
76 77 5.976534 TGCAATTCACACAAACACATTAGTC 59.023 36.000 0.00 0.00 0.00 2.59
77 78 5.402270 GCAATTCACACAAACACATTAGTCC 59.598 40.000 0.00 0.00 0.00 3.85
78 79 5.705609 ATTCACACAAACACATTAGTCCC 57.294 39.130 0.00 0.00 0.00 4.46
79 80 4.431416 TCACACAAACACATTAGTCCCT 57.569 40.909 0.00 0.00 0.00 4.20
80 81 4.385825 TCACACAAACACATTAGTCCCTC 58.614 43.478 0.00 0.00 0.00 4.30
81 82 4.133820 CACACAAACACATTAGTCCCTCA 58.866 43.478 0.00 0.00 0.00 3.86
82 83 4.578516 CACACAAACACATTAGTCCCTCAA 59.421 41.667 0.00 0.00 0.00 3.02
83 84 4.578928 ACACAAACACATTAGTCCCTCAAC 59.421 41.667 0.00 0.00 0.00 3.18
84 85 4.821805 CACAAACACATTAGTCCCTCAACT 59.178 41.667 0.00 0.00 0.00 3.16
85 86 5.995282 CACAAACACATTAGTCCCTCAACTA 59.005 40.000 0.00 0.00 0.00 2.24
86 87 6.147821 CACAAACACATTAGTCCCTCAACTAG 59.852 42.308 0.00 0.00 33.46 2.57
87 88 5.422214 AACACATTAGTCCCTCAACTAGG 57.578 43.478 0.00 0.00 46.09 3.02
88 89 4.426704 ACACATTAGTCCCTCAACTAGGT 58.573 43.478 0.00 0.00 44.90 3.08
89 90 4.844655 ACACATTAGTCCCTCAACTAGGTT 59.155 41.667 0.00 0.00 44.90 3.50
90 91 5.309806 ACACATTAGTCCCTCAACTAGGTTT 59.690 40.000 0.00 0.00 44.90 3.27
91 92 5.643777 CACATTAGTCCCTCAACTAGGTTTG 59.356 44.000 0.00 0.00 44.90 2.93
92 93 5.309806 ACATTAGTCCCTCAACTAGGTTTGT 59.690 40.000 0.00 0.00 44.90 2.83
93 94 5.479124 TTAGTCCCTCAACTAGGTTTGTC 57.521 43.478 0.00 0.00 44.90 3.18
94 95 2.299297 AGTCCCTCAACTAGGTTTGTCG 59.701 50.000 0.00 0.00 44.90 4.35
95 96 2.036862 GTCCCTCAACTAGGTTTGTCGT 59.963 50.000 0.00 0.00 44.90 4.34
96 97 2.298163 TCCCTCAACTAGGTTTGTCGTC 59.702 50.000 0.00 0.00 44.90 4.20
97 98 2.036733 CCCTCAACTAGGTTTGTCGTCA 59.963 50.000 0.00 0.00 44.90 4.35
98 99 3.493699 CCCTCAACTAGGTTTGTCGTCAA 60.494 47.826 0.00 0.00 44.90 3.18
99 100 4.315803 CCTCAACTAGGTTTGTCGTCAAT 58.684 43.478 0.00 0.00 40.94 2.57
100 101 5.475719 CCTCAACTAGGTTTGTCGTCAATA 58.524 41.667 0.00 0.00 40.94 1.90
101 102 5.347907 CCTCAACTAGGTTTGTCGTCAATAC 59.652 44.000 0.00 0.00 40.94 1.89
102 103 6.092955 TCAACTAGGTTTGTCGTCAATACT 57.907 37.500 0.00 0.88 33.32 2.12
103 104 6.154445 TCAACTAGGTTTGTCGTCAATACTC 58.846 40.000 0.00 0.00 33.32 2.59
104 105 5.069501 ACTAGGTTTGTCGTCAATACTCC 57.930 43.478 0.00 0.00 33.32 3.85
105 106 4.525487 ACTAGGTTTGTCGTCAATACTCCA 59.475 41.667 0.00 0.00 33.32 3.86
106 107 4.345859 AGGTTTGTCGTCAATACTCCAA 57.654 40.909 0.00 0.00 33.32 3.53
107 108 4.710324 AGGTTTGTCGTCAATACTCCAAA 58.290 39.130 0.00 0.00 33.32 3.28
108 109 5.127491 AGGTTTGTCGTCAATACTCCAAAA 58.873 37.500 0.00 0.00 33.32 2.44
109 110 5.008316 AGGTTTGTCGTCAATACTCCAAAAC 59.992 40.000 0.00 0.00 33.86 2.43
110 111 5.209977 GTTTGTCGTCAATACTCCAAAACC 58.790 41.667 0.00 0.00 33.32 3.27
111 112 4.074627 TGTCGTCAATACTCCAAAACCA 57.925 40.909 0.00 0.00 0.00 3.67
112 113 4.452825 TGTCGTCAATACTCCAAAACCAA 58.547 39.130 0.00 0.00 0.00 3.67
113 114 4.273969 TGTCGTCAATACTCCAAAACCAAC 59.726 41.667 0.00 0.00 0.00 3.77
114 115 4.514066 GTCGTCAATACTCCAAAACCAACT 59.486 41.667 0.00 0.00 0.00 3.16
115 116 5.697633 GTCGTCAATACTCCAAAACCAACTA 59.302 40.000 0.00 0.00 0.00 2.24
116 117 5.929992 TCGTCAATACTCCAAAACCAACTAG 59.070 40.000 0.00 0.00 0.00 2.57
117 118 5.121768 CGTCAATACTCCAAAACCAACTAGG 59.878 44.000 0.00 0.00 45.67 3.02
118 119 5.414765 GTCAATACTCCAAAACCAACTAGGG 59.585 44.000 0.00 0.00 43.89 3.53
119 120 2.971901 ACTCCAAAACCAACTAGGGG 57.028 50.000 0.00 0.00 43.89 4.79
120 121 2.141067 ACTCCAAAACCAACTAGGGGT 58.859 47.619 2.70 2.70 43.89 4.95
121 122 2.158519 ACTCCAAAACCAACTAGGGGTG 60.159 50.000 8.90 0.00 43.89 4.61
122 123 1.146152 TCCAAAACCAACTAGGGGTGG 59.854 52.381 8.90 8.22 43.89 4.61
123 124 0.966179 CAAAACCAACTAGGGGTGGC 59.034 55.000 8.90 0.00 43.89 5.01
124 125 0.558712 AAAACCAACTAGGGGTGGCA 59.441 50.000 8.90 0.00 43.89 4.92
125 126 0.178973 AAACCAACTAGGGGTGGCAC 60.179 55.000 9.70 9.70 43.89 5.01
126 127 1.065997 AACCAACTAGGGGTGGCACT 61.066 55.000 18.45 0.00 43.89 4.40
127 128 0.178885 ACCAACTAGGGGTGGCACTA 60.179 55.000 18.45 0.98 43.89 2.74
128 129 0.541863 CCAACTAGGGGTGGCACTAG 59.458 60.000 18.45 13.59 41.83 2.57
129 130 1.568504 CAACTAGGGGTGGCACTAGA 58.431 55.000 18.45 0.00 39.16 2.43
130 131 2.119495 CAACTAGGGGTGGCACTAGAT 58.881 52.381 18.45 3.55 39.16 1.98
131 132 1.794714 ACTAGGGGTGGCACTAGATG 58.205 55.000 18.45 8.10 39.16 2.90
146 147 1.372582 AGATGCACTTACACATGGCG 58.627 50.000 0.00 0.00 0.00 5.69
172 174 1.112916 AAAAAGCCCGTGGACCAAGG 61.113 55.000 18.82 18.82 32.93 3.61
176 178 2.203422 CCCGTGGACCAAGGCAAA 60.203 61.111 20.20 0.00 31.81 3.68
177 179 1.606313 CCCGTGGACCAAGGCAAAT 60.606 57.895 20.20 0.00 31.81 2.32
185 187 2.289010 GGACCAAGGCAAATGACAAAGG 60.289 50.000 0.00 0.00 0.00 3.11
191 193 1.617740 GCAAATGACAAAGGTAGCGC 58.382 50.000 0.00 0.00 0.00 5.92
196 198 2.248280 TGACAAAGGTAGCGCTTTGA 57.752 45.000 22.74 0.00 41.54 2.69
199 201 2.084546 ACAAAGGTAGCGCTTTGATCC 58.915 47.619 22.74 14.49 41.54 3.36
200 202 2.083774 CAAAGGTAGCGCTTTGATCCA 58.916 47.619 18.68 0.00 41.54 3.41
201 203 2.684881 CAAAGGTAGCGCTTTGATCCAT 59.315 45.455 18.68 1.10 41.54 3.41
202 204 2.717639 AGGTAGCGCTTTGATCCATT 57.282 45.000 18.68 0.00 0.00 3.16
203 205 2.292267 AGGTAGCGCTTTGATCCATTG 58.708 47.619 18.68 0.00 0.00 2.82
205 207 1.401552 GTAGCGCTTTGATCCATTGCA 59.598 47.619 18.68 0.00 0.00 4.08
206 208 0.171903 AGCGCTTTGATCCATTGCAC 59.828 50.000 2.64 0.00 0.00 4.57
208 210 0.527113 CGCTTTGATCCATTGCACCA 59.473 50.000 0.00 0.00 0.00 4.17
209 211 1.135527 CGCTTTGATCCATTGCACCAT 59.864 47.619 0.00 0.00 0.00 3.55
210 212 2.797087 CGCTTTGATCCATTGCACCATC 60.797 50.000 0.00 0.00 0.00 3.51
211 213 2.429610 GCTTTGATCCATTGCACCATCT 59.570 45.455 0.00 0.00 0.00 2.90
212 214 3.633525 GCTTTGATCCATTGCACCATCTA 59.366 43.478 0.00 0.00 0.00 1.98
213 215 4.280174 GCTTTGATCCATTGCACCATCTAT 59.720 41.667 0.00 0.00 0.00 1.98
215 217 6.016024 GCTTTGATCCATTGCACCATCTATTA 60.016 38.462 0.00 0.00 0.00 0.98
217 219 7.457024 TTGATCCATTGCACCATCTATTATG 57.543 36.000 0.00 0.00 0.00 1.90
218 220 6.781943 TGATCCATTGCACCATCTATTATGA 58.218 36.000 0.00 0.00 0.00 2.15
258 262 9.882996 AAATTATATGTCATGTATTGCAAGACG 57.117 29.630 18.59 6.27 45.70 4.18
285 289 3.099141 AGTATGGACAAAGGGCCATTTG 58.901 45.455 34.77 34.77 42.03 2.32
299 303 5.426185 AGGGCCATTTGATTTTGTCATATGT 59.574 36.000 6.18 0.00 41.75 2.29
308 312 9.958234 TTTGATTTTGTCATATGTCTTTTCGAA 57.042 25.926 1.90 0.00 36.54 3.71
323 328 1.314730 TCGAAGTCCACCTTTTTGCC 58.685 50.000 0.00 0.00 32.03 4.52
325 330 1.314730 GAAGTCCACCTTTTTGCCGA 58.685 50.000 0.00 0.00 32.03 5.54
339 344 3.915437 TTGCCGAGATTTTCAAAGTCC 57.085 42.857 0.00 0.00 0.00 3.85
407 414 3.763897 AGGCCTCATGTAAAATCAACACC 59.236 43.478 0.00 0.00 0.00 4.16
462 495 9.349713 AGACAGTTTAAACATGATACCTCAAAA 57.650 29.630 20.06 0.00 34.37 2.44
470 503 8.964420 AAACATGATACCTCAAAAATTGTACG 57.036 30.769 0.00 0.00 34.37 3.67
472 505 7.748847 ACATGATACCTCAAAAATTGTACGAC 58.251 34.615 0.00 0.00 34.37 4.34
478 511 4.755123 CCTCAAAAATTGTACGACCTCACT 59.245 41.667 0.00 0.00 0.00 3.41
483 516 7.170320 TCAAAAATTGTACGACCTCACTAAGTC 59.830 37.037 0.00 0.00 0.00 3.01
495 528 8.286800 CGACCTCACTAAGTCTATTCATAAGAG 58.713 40.741 0.00 0.00 0.00 2.85
648 682 9.667107 TGTTCTTATGTAAAGGACCTTGATAAG 57.333 33.333 21.80 21.80 0.00 1.73
649 683 9.668497 GTTCTTATGTAAAGGACCTTGATAAGT 57.332 33.333 24.13 8.94 29.61 2.24
650 684 9.667107 TTCTTATGTAAAGGACCTTGATAAGTG 57.333 33.333 24.13 12.50 29.61 3.16
651 685 7.769044 TCTTATGTAAAGGACCTTGATAAGTGC 59.231 37.037 24.13 9.98 29.61 4.40
652 686 4.250464 TGTAAAGGACCTTGATAAGTGCG 58.750 43.478 7.72 0.00 0.00 5.34
653 687 3.695830 AAAGGACCTTGATAAGTGCGA 57.304 42.857 7.72 0.00 0.00 5.10
654 688 2.674796 AGGACCTTGATAAGTGCGAC 57.325 50.000 0.00 0.00 0.00 5.19
655 689 1.899814 AGGACCTTGATAAGTGCGACA 59.100 47.619 0.00 0.00 0.00 4.35
656 690 2.000447 GGACCTTGATAAGTGCGACAC 59.000 52.381 2.28 2.28 34.10 3.67
657 691 1.654105 GACCTTGATAAGTGCGACACG 59.346 52.381 4.69 0.00 39.64 4.49
658 692 1.000506 ACCTTGATAAGTGCGACACGT 59.999 47.619 4.69 4.47 39.64 4.49
659 693 1.390123 CCTTGATAAGTGCGACACGTG 59.610 52.381 15.48 15.48 39.64 4.49
660 694 2.058798 CTTGATAAGTGCGACACGTGT 58.941 47.619 23.64 23.64 39.64 4.49
661 695 1.414378 TGATAAGTGCGACACGTGTG 58.586 50.000 28.82 18.75 39.64 3.82
662 696 0.713883 GATAAGTGCGACACGTGTGG 59.286 55.000 28.82 26.35 39.64 4.17
682 716 8.850454 GTGTGGCACGAACATATAATAATTTT 57.150 30.769 13.77 0.00 0.00 1.82
683 717 9.938670 GTGTGGCACGAACATATAATAATTTTA 57.061 29.630 13.77 0.00 0.00 1.52
708 742 8.623310 AAACGTTTTTATGACAAGTTTAGTGG 57.377 30.769 7.96 0.00 0.00 4.00
709 743 7.324354 ACGTTTTTATGACAAGTTTAGTGGT 57.676 32.000 0.00 0.00 0.00 4.16
710 744 7.190871 ACGTTTTTATGACAAGTTTAGTGGTG 58.809 34.615 0.00 0.00 0.00 4.17
711 745 6.141685 CGTTTTTATGACAAGTTTAGTGGTGC 59.858 38.462 0.00 0.00 0.00 5.01
712 746 5.351233 TTTATGACAAGTTTAGTGGTGCG 57.649 39.130 0.00 0.00 0.00 5.34
713 747 2.605837 TGACAAGTTTAGTGGTGCGA 57.394 45.000 0.00 0.00 0.00 5.10
714 748 2.479837 TGACAAGTTTAGTGGTGCGAG 58.520 47.619 0.00 0.00 0.00 5.03
715 749 2.101750 TGACAAGTTTAGTGGTGCGAGA 59.898 45.455 0.00 0.00 0.00 4.04
716 750 3.128349 GACAAGTTTAGTGGTGCGAGAA 58.872 45.455 0.00 0.00 0.00 2.87
717 751 3.740115 ACAAGTTTAGTGGTGCGAGAAT 58.260 40.909 0.00 0.00 0.00 2.40
718 752 3.498397 ACAAGTTTAGTGGTGCGAGAATG 59.502 43.478 0.00 0.00 0.00 2.67
719 753 2.699954 AGTTTAGTGGTGCGAGAATGG 58.300 47.619 0.00 0.00 0.00 3.16
720 754 1.130561 GTTTAGTGGTGCGAGAATGGC 59.869 52.381 0.00 0.00 41.71 4.40
733 767 6.976350 GCGAGAATGGCAATTTTAGTTATC 57.024 37.500 0.00 0.00 40.68 1.75
734 768 6.494842 GCGAGAATGGCAATTTTAGTTATCA 58.505 36.000 0.00 0.00 40.68 2.15
735 769 6.972328 GCGAGAATGGCAATTTTAGTTATCAA 59.028 34.615 0.00 0.00 40.68 2.57
736 770 7.487829 GCGAGAATGGCAATTTTAGTTATCAAA 59.512 33.333 0.00 0.00 40.68 2.69
737 771 9.520204 CGAGAATGGCAATTTTAGTTATCAAAT 57.480 29.630 0.00 0.00 0.00 2.32
849 944 3.742433 TTCAATGTTCACCCGCAAAAT 57.258 38.095 0.00 0.00 0.00 1.82
852 947 5.398603 TCAATGTTCACCCGCAAAATAAT 57.601 34.783 0.00 0.00 0.00 1.28
853 948 5.406649 TCAATGTTCACCCGCAAAATAATC 58.593 37.500 0.00 0.00 0.00 1.75
855 950 5.596836 ATGTTCACCCGCAAAATAATCAT 57.403 34.783 0.00 0.00 0.00 2.45
856 951 5.398603 TGTTCACCCGCAAAATAATCATT 57.601 34.783 0.00 0.00 0.00 2.57
857 952 5.406649 TGTTCACCCGCAAAATAATCATTC 58.593 37.500 0.00 0.00 0.00 2.67
858 953 4.647424 TCACCCGCAAAATAATCATTCC 57.353 40.909 0.00 0.00 0.00 3.01
859 954 3.066064 TCACCCGCAAAATAATCATTCCG 59.934 43.478 0.00 0.00 0.00 4.30
909 1033 1.171308 CAGGGTTGTTGATGCCAGAG 58.829 55.000 0.00 0.00 0.00 3.35
976 1100 2.831284 ACGGCCCCAAACACACAC 60.831 61.111 0.00 0.00 0.00 3.82
1030 1154 0.038343 GCTCAGCATCGATCCTCCTC 60.038 60.000 0.00 0.00 0.00 3.71
1550 1685 4.798682 TTCGGGGAGGAGGAGCCC 62.799 72.222 0.00 0.00 43.91 5.19
1719 3101 9.135843 CCGATTCAGATAATGCGTAACTTAATA 57.864 33.333 0.00 0.00 0.00 0.98
1731 3113 5.513849 GCGTAACTTAATAATTTGGTGCACC 59.486 40.000 29.67 29.67 0.00 5.01
1766 3148 1.865340 GGACGTTGTGGTCTCAGTTTC 59.135 52.381 0.00 0.00 37.12 2.78
1769 3151 2.093658 ACGTTGTGGTCTCAGTTTCAGT 60.094 45.455 0.00 0.00 0.00 3.41
1771 3153 1.953559 TGTGGTCTCAGTTTCAGTGC 58.046 50.000 0.00 0.00 0.00 4.40
1772 3154 0.861837 GTGGTCTCAGTTTCAGTGCG 59.138 55.000 0.00 0.00 0.00 5.34
1773 3155 0.249868 TGGTCTCAGTTTCAGTGCGG 60.250 55.000 0.00 0.00 0.00 5.69
1774 3156 0.033504 GGTCTCAGTTTCAGTGCGGA 59.966 55.000 0.00 0.00 0.00 5.54
1775 3157 1.540363 GGTCTCAGTTTCAGTGCGGAA 60.540 52.381 0.00 0.00 0.00 4.30
1776 3158 1.527311 GTCTCAGTTTCAGTGCGGAAC 59.473 52.381 0.00 0.00 0.00 3.62
1777 3159 1.412710 TCTCAGTTTCAGTGCGGAACT 59.587 47.619 0.00 0.00 40.93 3.01
1848 3230 2.539142 GCAAAGATCTCAAGCATGCTCG 60.539 50.000 22.93 10.79 0.00 5.03
1859 3241 3.266510 AGCATGCTCGTCCTGAATTAA 57.733 42.857 16.30 0.00 0.00 1.40
1872 3256 5.853282 GTCCTGAATTAATTGATATGCGCAC 59.147 40.000 14.90 0.00 0.00 5.34
1883 3267 0.750850 TATGCGCACCTTAGAGTCCC 59.249 55.000 14.90 0.00 0.00 4.46
1884 3268 2.202756 GCGCACCTTAGAGTCCCG 60.203 66.667 0.30 0.00 0.00 5.14
1950 3335 0.889186 ATTGAAGTCCCCACGTGCAC 60.889 55.000 10.91 6.82 0.00 4.57
2027 3412 5.933617 TCAGTTCATTGATGCTAGCCTATT 58.066 37.500 13.29 0.00 0.00 1.73
2030 3415 6.916387 CAGTTCATTGATGCTAGCCTATTTTG 59.084 38.462 13.29 3.42 0.00 2.44
2035 3420 6.441093 TTGATGCTAGCCTATTTTGTTCTG 57.559 37.500 13.29 0.00 0.00 3.02
2037 3422 3.684908 TGCTAGCCTATTTTGTTCTGCA 58.315 40.909 13.29 0.00 0.00 4.41
2107 3492 3.443099 TGTGATTCTGTCCATCTAGCG 57.557 47.619 0.00 0.00 0.00 4.26
2163 3548 9.793252 GTTGTCATGCTATCAATTTGATTAACT 57.207 29.630 16.62 0.00 38.26 2.24
2239 3624 6.818233 TGTAAATATGTAATACCACGCTCCA 58.182 36.000 0.00 0.00 0.00 3.86
2323 3708 6.866010 TTATGTAGCTATGCACAGGAAATG 57.134 37.500 0.00 0.00 0.00 2.32
2355 3740 4.801891 TCACAGAATTGATTTCAAGCAGC 58.198 39.130 0.00 0.00 39.47 5.25
2448 3833 7.979537 TGACGTGATATTGAGCTAACATTTAGT 59.020 33.333 0.00 0.00 0.00 2.24
2473 3859 9.628500 GTTCTGGAATAAATAGTTCACCCTATT 57.372 33.333 0.00 0.00 38.88 1.73
2508 3894 4.710375 TCTCTACGCCTTTTAGTCCTGAAT 59.290 41.667 0.00 0.00 0.00 2.57
2735 4121 7.031975 CAGATTTAAAGGTTCAGATTTGCTCC 58.968 38.462 0.00 0.00 0.00 4.70
3017 6637 1.139853 AGGCTATAGCACCACAAGCTC 59.860 52.381 25.53 4.75 42.32 4.09
3074 6694 5.789574 TTTGGTCCCTTTACAGGTGATAT 57.210 39.130 0.00 0.00 38.79 1.63
3177 6797 3.054655 TGGTAGAAATGTGACCCTTAGGC 60.055 47.826 0.00 0.00 36.11 3.93
3179 6799 4.407945 GGTAGAAATGTGACCCTTAGGCTA 59.592 45.833 0.00 0.00 36.11 3.93
3263 6883 0.306533 CCGTTCCTGTGTTTGGTTCG 59.693 55.000 0.00 0.00 0.00 3.95
3264 6884 0.306533 CGTTCCTGTGTTTGGTTCGG 59.693 55.000 0.00 0.00 0.00 4.30
3265 6885 1.670791 GTTCCTGTGTTTGGTTCGGA 58.329 50.000 0.00 0.00 0.00 4.55
3266 6886 2.018515 GTTCCTGTGTTTGGTTCGGAA 58.981 47.619 0.00 0.00 0.00 4.30
3267 6887 1.670791 TCCTGTGTTTGGTTCGGAAC 58.329 50.000 12.41 12.41 0.00 3.62
3268 6888 1.210967 TCCTGTGTTTGGTTCGGAACT 59.789 47.619 19.40 0.00 0.00 3.01
3269 6889 2.021457 CCTGTGTTTGGTTCGGAACTT 58.979 47.619 19.40 0.00 0.00 2.66
3270 6890 2.032924 CCTGTGTTTGGTTCGGAACTTC 59.967 50.000 19.40 5.61 0.00 3.01
3283 6903 4.940463 TCGGAACTTCGGATAATTAGGTG 58.060 43.478 0.00 0.00 0.00 4.00
3284 6904 4.646040 TCGGAACTTCGGATAATTAGGTGA 59.354 41.667 0.00 0.00 0.00 4.02
3285 6905 4.743644 CGGAACTTCGGATAATTAGGTGAC 59.256 45.833 0.00 0.00 0.00 3.67
3286 6906 5.055144 GGAACTTCGGATAATTAGGTGACC 58.945 45.833 0.00 0.00 0.00 4.02
3287 6907 5.163332 GGAACTTCGGATAATTAGGTGACCT 60.163 44.000 10.00 10.00 37.71 3.85
3289 6909 4.715297 ACTTCGGATAATTAGGTGACCTGT 59.285 41.667 15.83 0.00 34.61 4.00
3327 6948 4.770010 GTGTTTGGTTGGGGAGATGAAATA 59.230 41.667 0.00 0.00 0.00 1.40
3328 6949 5.245075 GTGTTTGGTTGGGGAGATGAAATAA 59.755 40.000 0.00 0.00 0.00 1.40
3331 6952 5.993748 TGGTTGGGGAGATGAAATAAAAC 57.006 39.130 0.00 0.00 0.00 2.43
3420 7049 9.620259 GAAATGGTGAGATTACCTCTTTTATCT 57.380 33.333 0.00 0.00 42.44 1.98
3594 7228 7.534723 TGGTACACACTTAAGAGTTCATAGT 57.465 36.000 10.09 4.02 32.54 2.12
3692 8215 5.309638 TGCAGTTTACAACCAGTAGCAATA 58.690 37.500 0.00 0.00 33.43 1.90
3717 8240 3.748083 TCTCTCTTGCTTGCATTTCTGT 58.252 40.909 0.00 0.00 0.00 3.41
3726 8249 3.305629 GCTTGCATTTCTGTACTCTCTCG 59.694 47.826 0.00 0.00 0.00 4.04
3727 8250 4.738124 CTTGCATTTCTGTACTCTCTCGA 58.262 43.478 0.00 0.00 0.00 4.04
3839 8391 3.273886 TCAATCCTAGAGAACCTGGGGTA 59.726 47.826 0.00 0.00 43.19 3.69
3942 8495 3.061848 CGAACACCCCCATGGCAC 61.062 66.667 6.09 0.00 37.83 5.01
3990 8543 0.251121 TTGCTCTTGGCCAAATCGGA 60.251 50.000 20.91 12.19 40.92 4.55
4041 8594 1.835927 GCCACACTGCCTCTCTTCCT 61.836 60.000 0.00 0.00 0.00 3.36
4090 8643 3.127533 GCTAGCCCAACGCCACTG 61.128 66.667 2.29 0.00 38.78 3.66
4102 8655 1.375908 GCCACTGGTCGCATTCTCA 60.376 57.895 0.00 0.00 0.00 3.27
4111 8664 0.321346 TCGCATTCTCACTGGAAGCA 59.679 50.000 0.00 0.00 37.60 3.91
4157 8710 1.068083 CGCTGCCACCATAGACGAT 59.932 57.895 0.00 0.00 0.00 3.73
4198 8760 2.607750 AGGGCATGGACGGTGAGT 60.608 61.111 0.00 0.00 0.00 3.41
4225 8787 1.975680 GGGTGGAACTGTGTCTAAGGA 59.024 52.381 0.00 0.00 36.74 3.36
4276 8840 6.459670 TCTGGTTCCTTTTCAAACTAAACC 57.540 37.500 0.00 0.00 36.16 3.27
4329 8893 5.487488 CCCATTACATTCTACCCTATGCCTA 59.513 44.000 0.00 0.00 0.00 3.93
4393 8966 7.395489 AGTTTCAGACTGCAAATAGGATGAATT 59.605 33.333 0.00 0.00 37.17 2.17
4437 9010 0.321298 GTTTCGCTTCAGGTGGCCTA 60.321 55.000 3.32 0.00 29.64 3.93
4587 9160 2.360801 CCGGTCCTTCAGATCTCTCTTC 59.639 54.545 0.00 0.00 0.00 2.87
4589 9162 3.642141 GGTCCTTCAGATCTCTCTTCCT 58.358 50.000 0.00 0.00 0.00 3.36
4728 9305 2.549754 CAGACGATGTTGGACAAGCTTT 59.450 45.455 0.00 0.00 0.00 3.51
4743 9320 3.070429 AGCTTTTCTTCAAACAGTGCG 57.930 42.857 0.00 0.00 0.00 5.34
4744 9321 1.518515 GCTTTTCTTCAAACAGTGCGC 59.481 47.619 0.00 0.00 0.00 6.09
4764 9341 2.104281 GCCCCCAACTCTATCACGTATT 59.896 50.000 0.00 0.00 0.00 1.89
4780 9357 2.806244 CGTATTTCATCATTCCGGACCC 59.194 50.000 1.83 0.00 0.00 4.46
4878 9455 1.560505 ATCAAGAAAGGGCGGCATTT 58.439 45.000 21.99 21.99 0.00 2.32
4933 9510 9.631639 GTGTTTTTATTTTTCAATGCACACTAC 57.368 29.630 0.00 0.00 0.00 2.73
4970 9548 9.672673 TTCTCCTTAGGTCTCATTTATTTTCTG 57.327 33.333 0.00 0.00 0.00 3.02
4991 9569 9.844257 TTTCTGTTCCAAATTATTTCCACATTT 57.156 25.926 0.00 0.00 0.00 2.32
5011 9589 7.121020 CACATTTTAATTTCCCCTTTTCCCATG 59.879 37.037 0.00 0.00 0.00 3.66
5047 9625 2.698763 GGAGGAGCTGCTGCAAAGC 61.699 63.158 21.74 12.13 42.74 3.51
5084 9662 2.457598 AGCGAGGATCTGAAACTACCA 58.542 47.619 0.00 0.00 0.00 3.25
5161 9739 7.011857 GTGATAGAACCTTCAATCATCCAAGAC 59.988 40.741 0.00 0.00 0.00 3.01
5191 9769 1.954382 TCCATATCAGAGGTCCGTTCG 59.046 52.381 0.00 0.00 0.00 3.95
5233 9811 2.125106 ACGCCAGAAATCGAGGCC 60.125 61.111 7.02 0.00 45.56 5.19
5248 9826 1.376037 GGCCGAGAAGTTCCCAGTG 60.376 63.158 0.00 0.00 0.00 3.66
5322 9900 7.536622 GCTGTTGTCAGTGAAAGATAAAATCAG 59.463 37.037 0.00 0.00 43.05 2.90
5326 9904 4.949856 TCAGTGAAAGATAAAATCAGGGCC 59.050 41.667 0.00 0.00 0.00 5.80
5335 9913 2.198304 AAATCAGGGCCCCACTCGTC 62.198 60.000 21.43 0.00 0.00 4.20
5399 9977 0.904649 ATGGCCTGACGATGACTCAA 59.095 50.000 3.32 0.00 0.00 3.02
5497 10075 1.508746 GGAAGACGACGACGACGAC 60.509 63.158 25.15 18.88 42.66 4.34
5663 10254 5.867716 GGATGATTACGCGGTCATTATTAGT 59.132 40.000 19.90 2.82 35.33 2.24
5667 10258 3.366440 ACGCGGTCATTATTAGTCTCC 57.634 47.619 12.47 0.00 0.00 3.71
5668 10259 2.035576 ACGCGGTCATTATTAGTCTCCC 59.964 50.000 12.47 0.00 0.00 4.30
5669 10260 2.296471 CGCGGTCATTATTAGTCTCCCT 59.704 50.000 0.00 0.00 0.00 4.20
5670 10261 3.612004 CGCGGTCATTATTAGTCTCCCTC 60.612 52.174 0.00 0.00 0.00 4.30
5671 10262 3.574826 GCGGTCATTATTAGTCTCCCTCT 59.425 47.826 0.00 0.00 0.00 3.69
5672 10263 4.039366 GCGGTCATTATTAGTCTCCCTCTT 59.961 45.833 0.00 0.00 0.00 2.85
5674 10265 5.302059 CGGTCATTATTAGTCTCCCTCTTGA 59.698 44.000 0.00 0.00 0.00 3.02
5675 10266 6.515862 CGGTCATTATTAGTCTCCCTCTTGAG 60.516 46.154 0.00 0.00 0.00 3.02
5676 10267 6.551601 GGTCATTATTAGTCTCCCTCTTGAGA 59.448 42.308 0.00 0.00 39.04 3.27
5677 10268 7.255801 GGTCATTATTAGTCTCCCTCTTGAGAG 60.256 44.444 0.93 0.93 41.87 3.20
5694 10285 1.204231 AGAGGCGATGATGATGGATCG 59.796 52.381 0.00 0.00 43.49 3.69
5711 10302 2.671070 GTGGAAGCTGGCTGGCTA 59.329 61.111 2.00 0.00 42.24 3.93
5712 10303 1.451028 GTGGAAGCTGGCTGGCTAG 60.451 63.158 2.00 1.54 42.24 3.42
5727 10318 3.740495 CTAGCTGGGCCTCCCTCGA 62.740 68.421 4.53 0.00 45.70 4.04
5758 10349 6.970484 TGAATTAGAAGAGAAGCACAAAACC 58.030 36.000 0.00 0.00 0.00 3.27
5774 10370 4.937015 ACAAAACCAATAATGATGGCAAGC 59.063 37.500 0.00 0.00 41.89 4.01
5874 10475 0.670546 CTGGCAACGTACCACTCTGG 60.671 60.000 6.14 0.00 42.02 3.86
5886 10487 1.610673 ACTCTGGCCGTCCATCTGT 60.611 57.895 0.00 0.00 42.51 3.41
5896 10497 1.406751 CGTCCATCTGTGTGGGCATAA 60.407 52.381 7.10 0.00 44.17 1.90
6009 10628 7.882791 TCTTTGCTTGATTTCTGGTATGAGTTA 59.117 33.333 0.00 0.00 0.00 2.24
6042 10663 6.969669 CAGACCTGCTTAAAAAGTTTTACG 57.030 37.500 0.24 0.00 32.77 3.18
6045 10666 5.038683 ACCTGCTTAAAAAGTTTTACGCAC 58.961 37.500 18.40 2.24 46.25 5.34
6053 10674 5.564048 AAAAGTTTTACGCACTTGTGGTA 57.436 34.783 0.00 1.37 34.59 3.25
6054 10675 4.806342 AAGTTTTACGCACTTGTGGTAG 57.194 40.909 2.81 0.00 33.04 3.18
6119 10740 3.125829 AGCTAACTTGTGTGAATCATGCG 59.874 43.478 0.00 0.00 0.00 4.73
6136 10757 0.667792 GCGTCCAGCTTCTTCGAACT 60.668 55.000 0.00 0.00 44.04 3.01
6137 10758 1.402456 GCGTCCAGCTTCTTCGAACTA 60.402 52.381 0.00 0.00 44.04 2.24
6138 10759 2.251893 CGTCCAGCTTCTTCGAACTAC 58.748 52.381 0.00 0.00 0.00 2.73
6139 10760 2.351447 CGTCCAGCTTCTTCGAACTACA 60.351 50.000 0.00 0.00 0.00 2.74
6140 10761 3.246619 GTCCAGCTTCTTCGAACTACAG 58.753 50.000 0.00 0.00 0.00 2.74
6213 10916 8.593057 CAAGTAATTCTTGCGTAGATTCTTTG 57.407 34.615 0.00 0.00 45.37 2.77
6215 10918 5.567138 AATTCTTGCGTAGATTCTTTGGG 57.433 39.130 0.00 0.00 31.54 4.12
6217 10920 1.401905 CTTGCGTAGATTCTTTGGGCC 59.598 52.381 0.00 0.00 0.00 5.80
6219 10922 1.436983 GCGTAGATTCTTTGGGCCGG 61.437 60.000 0.00 0.00 0.00 6.13
6220 10923 0.107848 CGTAGATTCTTTGGGCCGGT 60.108 55.000 1.90 0.00 0.00 5.28
6221 10924 1.677820 CGTAGATTCTTTGGGCCGGTT 60.678 52.381 1.90 0.00 0.00 4.44
6222 10925 1.743394 GTAGATTCTTTGGGCCGGTTG 59.257 52.381 1.90 0.00 0.00 3.77
6223 10926 0.611896 AGATTCTTTGGGCCGGTTGG 60.612 55.000 1.90 0.00 38.77 3.77
6241 10944 3.104766 CGTGTGGGCATGCATCTC 58.895 61.111 21.36 12.08 0.00 2.75
6275 10978 2.223409 CGAAGTGATACGGAATCGACCA 60.223 50.000 0.00 0.00 37.42 4.02
6298 11001 1.520564 GTATGTGATCACCGGCGCA 60.521 57.895 22.85 3.55 0.00 6.09
6302 11005 2.106938 TGATCACCGGCGCATCTC 59.893 61.111 10.83 0.00 0.00 2.75
6447 11910 1.339929 CCCAAACGAACAAGAAAGGGG 59.660 52.381 0.00 0.00 0.00 4.79
6453 11916 1.587043 GAACAAGAAAGGGGGCGCTC 61.587 60.000 7.64 1.18 0.00 5.03
6483 11946 4.876828 CGGCGGCATGGCAATTGG 62.877 66.667 20.37 3.29 45.16 3.16
6496 11959 0.393820 CAATTGGCAAGTGCAACCCT 59.606 50.000 15.17 0.00 44.36 4.34
6497 11960 0.393820 AATTGGCAAGTGCAACCCTG 59.606 50.000 5.96 0.00 44.36 4.45
6516 12022 2.291043 GGGATCGGCCGGATGGTAT 61.291 63.158 27.83 10.35 34.82 2.73
6556 12062 1.746615 CGGAGACATGTGCAAGGGG 60.747 63.158 1.15 0.00 0.00 4.79
6566 12072 3.060615 GCAAGGGGACTGCAGCTG 61.061 66.667 15.27 10.11 42.68 4.24
6652 12158 4.180946 CGACCCCGAGAGCGACTG 62.181 72.222 0.00 0.00 40.82 3.51
6748 12267 2.817834 CGCCACCCGTACCACATG 60.818 66.667 0.00 0.00 0.00 3.21
6873 12392 2.072298 GATCAGCAGCAAAGAGTTCGT 58.928 47.619 0.00 0.00 0.00 3.85
6874 12393 1.220529 TCAGCAGCAAAGAGTTCGTG 58.779 50.000 0.00 0.00 0.00 4.35
6896 12415 3.250744 CTGAACGCGGATACAGAGAAAA 58.749 45.455 12.47 0.00 32.90 2.29
6917 12436 1.055040 AAGAGCTTCAGACTGTGGCT 58.945 50.000 19.14 19.14 35.86 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.437213 TCGGTTTTCCTACCAGAGATGA 58.563 45.455 0.00 0.00 38.12 2.92
3 4 3.835978 TGATTCGGTTTTCCTACCAGAGA 59.164 43.478 0.00 0.00 38.12 3.10
4 5 4.202245 TGATTCGGTTTTCCTACCAGAG 57.798 45.455 0.00 0.00 38.12 3.35
5 6 4.627284 TTGATTCGGTTTTCCTACCAGA 57.373 40.909 0.00 0.00 38.12 3.86
7 8 4.912586 TCATTGATTCGGTTTTCCTACCA 58.087 39.130 0.00 0.00 38.12 3.25
9 10 4.335594 CCCTCATTGATTCGGTTTTCCTAC 59.664 45.833 0.00 0.00 37.95 3.18
10 11 4.226394 TCCCTCATTGATTCGGTTTTCCTA 59.774 41.667 0.00 0.00 37.95 2.94
11 12 3.010138 TCCCTCATTGATTCGGTTTTCCT 59.990 43.478 0.00 0.00 37.95 3.36
13 14 4.010349 AGTCCCTCATTGATTCGGTTTTC 58.990 43.478 0.00 0.00 0.00 2.29
14 15 4.034285 AGTCCCTCATTGATTCGGTTTT 57.966 40.909 0.00 0.00 0.00 2.43
15 16 3.721087 AGTCCCTCATTGATTCGGTTT 57.279 42.857 0.00 0.00 0.00 3.27
16 17 3.721087 AAGTCCCTCATTGATTCGGTT 57.279 42.857 0.00 0.00 0.00 4.44
17 18 3.721087 AAAGTCCCTCATTGATTCGGT 57.279 42.857 0.00 0.00 0.00 4.69
21 22 5.711976 CACAGGTAAAAGTCCCTCATTGATT 59.288 40.000 0.00 0.00 0.00 2.57
22 23 5.222130 ACACAGGTAAAAGTCCCTCATTGAT 60.222 40.000 0.00 0.00 0.00 2.57
23 24 4.104102 ACACAGGTAAAAGTCCCTCATTGA 59.896 41.667 0.00 0.00 0.00 2.57
24 25 4.398319 ACACAGGTAAAAGTCCCTCATTG 58.602 43.478 0.00 0.00 0.00 2.82
25 26 4.724279 ACACAGGTAAAAGTCCCTCATT 57.276 40.909 0.00 0.00 0.00 2.57
26 27 4.724279 AACACAGGTAAAAGTCCCTCAT 57.276 40.909 0.00 0.00 0.00 2.90
27 28 5.280317 GGATAACACAGGTAAAAGTCCCTCA 60.280 44.000 0.00 0.00 0.00 3.86
28 29 5.045797 AGGATAACACAGGTAAAAGTCCCTC 60.046 44.000 0.00 0.00 0.00 4.30
29 30 4.850386 AGGATAACACAGGTAAAAGTCCCT 59.150 41.667 0.00 0.00 0.00 4.20
30 31 4.941873 CAGGATAACACAGGTAAAAGTCCC 59.058 45.833 0.00 0.00 0.00 4.46
31 32 4.395231 GCAGGATAACACAGGTAAAAGTCC 59.605 45.833 0.00 0.00 0.00 3.85
32 33 5.001232 TGCAGGATAACACAGGTAAAAGTC 58.999 41.667 0.00 0.00 0.00 3.01
33 34 4.980573 TGCAGGATAACACAGGTAAAAGT 58.019 39.130 0.00 0.00 0.00 2.66
34 35 5.957842 TTGCAGGATAACACAGGTAAAAG 57.042 39.130 0.00 0.00 0.00 2.27
35 36 6.491745 TGAATTGCAGGATAACACAGGTAAAA 59.508 34.615 0.00 0.00 0.00 1.52
36 37 6.007076 TGAATTGCAGGATAACACAGGTAAA 58.993 36.000 0.00 0.00 0.00 2.01
37 38 5.414454 GTGAATTGCAGGATAACACAGGTAA 59.586 40.000 0.00 0.00 0.00 2.85
38 39 4.941263 GTGAATTGCAGGATAACACAGGTA 59.059 41.667 0.00 0.00 0.00 3.08
39 40 3.758554 GTGAATTGCAGGATAACACAGGT 59.241 43.478 0.00 0.00 0.00 4.00
40 41 3.758023 TGTGAATTGCAGGATAACACAGG 59.242 43.478 0.00 0.00 33.81 4.00
41 42 4.216042 TGTGTGAATTGCAGGATAACACAG 59.784 41.667 15.89 0.00 40.90 3.66
42 43 4.140536 TGTGTGAATTGCAGGATAACACA 58.859 39.130 15.89 15.89 42.84 3.72
43 44 4.764679 TGTGTGAATTGCAGGATAACAC 57.235 40.909 12.23 12.23 37.53 3.32
44 45 5.068329 TGTTTGTGTGAATTGCAGGATAACA 59.932 36.000 0.00 0.00 0.00 2.41
45 46 5.402270 GTGTTTGTGTGAATTGCAGGATAAC 59.598 40.000 0.00 0.00 0.00 1.89
46 47 5.068329 TGTGTTTGTGTGAATTGCAGGATAA 59.932 36.000 0.00 0.00 0.00 1.75
47 48 4.582240 TGTGTTTGTGTGAATTGCAGGATA 59.418 37.500 0.00 0.00 0.00 2.59
48 49 3.384146 TGTGTTTGTGTGAATTGCAGGAT 59.616 39.130 0.00 0.00 0.00 3.24
49 50 2.757314 TGTGTTTGTGTGAATTGCAGGA 59.243 40.909 0.00 0.00 0.00 3.86
50 51 3.162202 TGTGTTTGTGTGAATTGCAGG 57.838 42.857 0.00 0.00 0.00 4.85
51 52 5.978919 ACTAATGTGTTTGTGTGAATTGCAG 59.021 36.000 0.00 0.00 0.00 4.41
52 53 5.900425 ACTAATGTGTTTGTGTGAATTGCA 58.100 33.333 0.00 0.00 0.00 4.08
53 54 5.402270 GGACTAATGTGTTTGTGTGAATTGC 59.598 40.000 0.00 0.00 0.00 3.56
54 55 5.920273 GGGACTAATGTGTTTGTGTGAATTG 59.080 40.000 0.00 0.00 0.00 2.32
55 56 5.833131 AGGGACTAATGTGTTTGTGTGAATT 59.167 36.000 0.00 0.00 36.02 2.17
56 57 5.385198 AGGGACTAATGTGTTTGTGTGAAT 58.615 37.500 0.00 0.00 36.02 2.57
57 58 4.787551 AGGGACTAATGTGTTTGTGTGAA 58.212 39.130 0.00 0.00 36.02 3.18
58 59 4.141597 TGAGGGACTAATGTGTTTGTGTGA 60.142 41.667 0.00 0.00 41.55 3.58
59 60 4.133820 TGAGGGACTAATGTGTTTGTGTG 58.866 43.478 0.00 0.00 41.55 3.82
60 61 4.431416 TGAGGGACTAATGTGTTTGTGT 57.569 40.909 0.00 0.00 41.55 3.72
61 62 4.821805 AGTTGAGGGACTAATGTGTTTGTG 59.178 41.667 0.00 0.00 41.55 3.33
62 63 5.048846 AGTTGAGGGACTAATGTGTTTGT 57.951 39.130 0.00 0.00 41.55 2.83
63 64 5.643777 CCTAGTTGAGGGACTAATGTGTTTG 59.356 44.000 0.00 0.00 41.55 2.93
64 65 5.805728 CCTAGTTGAGGGACTAATGTGTTT 58.194 41.667 0.00 0.00 41.55 2.83
65 66 5.422214 CCTAGTTGAGGGACTAATGTGTT 57.578 43.478 0.00 0.00 41.55 3.32
74 75 8.901958 ATTGACGACAAACCTAGTTGAGGGAC 62.902 46.154 4.09 0.00 42.78 4.46
75 76 6.973524 ATTGACGACAAACCTAGTTGAGGGA 61.974 44.000 4.09 0.00 42.78 4.20
76 77 4.802918 ATTGACGACAAACCTAGTTGAGGG 60.803 45.833 4.09 0.00 42.78 4.30
77 78 4.315803 ATTGACGACAAACCTAGTTGAGG 58.684 43.478 4.09 0.00 43.49 3.86
78 79 6.157211 AGTATTGACGACAAACCTAGTTGAG 58.843 40.000 4.09 0.00 39.54 3.02
79 80 6.092955 AGTATTGACGACAAACCTAGTTGA 57.907 37.500 4.09 0.00 39.54 3.18
80 81 5.347907 GGAGTATTGACGACAAACCTAGTTG 59.652 44.000 4.09 0.00 39.54 3.16
81 82 5.011329 TGGAGTATTGACGACAAACCTAGTT 59.989 40.000 4.09 0.00 39.54 2.24
82 83 4.525487 TGGAGTATTGACGACAAACCTAGT 59.475 41.667 4.09 0.00 39.54 2.57
83 84 5.068234 TGGAGTATTGACGACAAACCTAG 57.932 43.478 4.09 0.00 39.54 3.02
84 85 5.471556 TTGGAGTATTGACGACAAACCTA 57.528 39.130 4.09 1.50 39.54 3.08
85 86 4.345859 TTGGAGTATTGACGACAAACCT 57.654 40.909 4.09 3.43 39.54 3.50
86 87 5.209977 GTTTTGGAGTATTGACGACAAACC 58.790 41.667 4.09 6.92 39.54 3.27
87 88 5.209977 GGTTTTGGAGTATTGACGACAAAC 58.790 41.667 4.09 4.89 39.54 2.93
88 89 4.882427 TGGTTTTGGAGTATTGACGACAAA 59.118 37.500 4.09 0.00 39.54 2.83
89 90 4.452825 TGGTTTTGGAGTATTGACGACAA 58.547 39.130 2.18 2.18 40.42 3.18
90 91 4.074627 TGGTTTTGGAGTATTGACGACA 57.925 40.909 0.00 0.00 0.00 4.35
91 92 4.514066 AGTTGGTTTTGGAGTATTGACGAC 59.486 41.667 0.00 0.00 0.00 4.34
92 93 4.710324 AGTTGGTTTTGGAGTATTGACGA 58.290 39.130 0.00 0.00 0.00 4.20
93 94 5.121768 CCTAGTTGGTTTTGGAGTATTGACG 59.878 44.000 0.00 0.00 0.00 4.35
94 95 5.414765 CCCTAGTTGGTTTTGGAGTATTGAC 59.585 44.000 0.00 0.00 0.00 3.18
95 96 5.515886 CCCCTAGTTGGTTTTGGAGTATTGA 60.516 44.000 0.00 0.00 0.00 2.57
96 97 4.705023 CCCCTAGTTGGTTTTGGAGTATTG 59.295 45.833 0.00 0.00 0.00 1.90
97 98 4.355889 ACCCCTAGTTGGTTTTGGAGTATT 59.644 41.667 0.00 0.00 29.75 1.89
98 99 3.920841 ACCCCTAGTTGGTTTTGGAGTAT 59.079 43.478 0.00 0.00 29.75 2.12
99 100 3.073356 CACCCCTAGTTGGTTTTGGAGTA 59.927 47.826 0.00 0.00 32.46 2.59
100 101 2.141067 ACCCCTAGTTGGTTTTGGAGT 58.859 47.619 0.00 0.00 29.75 3.85
101 102 2.514803 CACCCCTAGTTGGTTTTGGAG 58.485 52.381 0.00 0.00 32.46 3.86
102 103 1.146152 CCACCCCTAGTTGGTTTTGGA 59.854 52.381 0.00 0.00 32.46 3.53
103 104 1.627864 CCACCCCTAGTTGGTTTTGG 58.372 55.000 0.00 0.00 32.46 3.28
104 105 0.966179 GCCACCCCTAGTTGGTTTTG 59.034 55.000 0.00 0.00 32.46 2.44
105 106 0.558712 TGCCACCCCTAGTTGGTTTT 59.441 50.000 0.00 0.00 32.46 2.43
106 107 0.178973 GTGCCACCCCTAGTTGGTTT 60.179 55.000 0.00 0.00 32.46 3.27
107 108 1.065997 AGTGCCACCCCTAGTTGGTT 61.066 55.000 0.00 0.00 32.46 3.67
108 109 0.178885 TAGTGCCACCCCTAGTTGGT 60.179 55.000 0.00 0.53 36.21 3.67
109 110 0.541863 CTAGTGCCACCCCTAGTTGG 59.458 60.000 0.00 0.00 0.00 3.77
110 111 1.568504 TCTAGTGCCACCCCTAGTTG 58.431 55.000 0.00 0.00 33.81 3.16
111 112 2.119495 CATCTAGTGCCACCCCTAGTT 58.881 52.381 0.00 0.00 33.81 2.24
112 113 1.794714 CATCTAGTGCCACCCCTAGT 58.205 55.000 0.00 0.00 33.81 2.57
123 124 3.310774 GCCATGTGTAAGTGCATCTAGTG 59.689 47.826 0.00 0.00 0.00 2.74
124 125 3.535561 GCCATGTGTAAGTGCATCTAGT 58.464 45.455 0.00 0.00 0.00 2.57
125 126 2.541346 CGCCATGTGTAAGTGCATCTAG 59.459 50.000 0.00 0.00 0.00 2.43
126 127 2.093711 ACGCCATGTGTAAGTGCATCTA 60.094 45.455 0.00 0.00 0.00 1.98
127 128 1.339055 ACGCCATGTGTAAGTGCATCT 60.339 47.619 0.00 0.00 0.00 2.90
128 129 1.086696 ACGCCATGTGTAAGTGCATC 58.913 50.000 0.00 0.00 0.00 3.91
129 130 0.804364 CACGCCATGTGTAAGTGCAT 59.196 50.000 0.00 0.00 43.88 3.96
130 131 2.243056 CACGCCATGTGTAAGTGCA 58.757 52.632 0.00 0.00 43.88 4.57
155 156 2.115266 CCTTGGTCCACGGGCTTT 59.885 61.111 6.50 0.00 0.00 3.51
158 159 4.966787 TTGCCTTGGTCCACGGGC 62.967 66.667 21.95 21.95 44.31 6.13
159 160 1.606313 ATTTGCCTTGGTCCACGGG 60.606 57.895 15.91 10.60 0.00 5.28
162 163 1.327303 TGTCATTTGCCTTGGTCCAC 58.673 50.000 0.00 0.00 0.00 4.02
163 164 2.079170 TTGTCATTTGCCTTGGTCCA 57.921 45.000 0.00 0.00 0.00 4.02
164 165 2.289010 CCTTTGTCATTTGCCTTGGTCC 60.289 50.000 0.00 0.00 0.00 4.46
172 174 1.200020 AGCGCTACCTTTGTCATTTGC 59.800 47.619 8.99 0.00 0.00 3.68
185 187 1.401552 TGCAATGGATCAAAGCGCTAC 59.598 47.619 12.05 0.00 0.00 3.58
191 193 6.401047 AATAGATGGTGCAATGGATCAAAG 57.599 37.500 0.00 0.00 0.00 2.77
196 198 6.883217 GTCTCATAATAGATGGTGCAATGGAT 59.117 38.462 0.00 0.00 0.00 3.41
199 201 7.683437 ATGTCTCATAATAGATGGTGCAATG 57.317 36.000 0.00 0.00 0.00 2.82
200 202 8.573885 CAAATGTCTCATAATAGATGGTGCAAT 58.426 33.333 0.00 0.00 0.00 3.56
201 203 7.469043 GCAAATGTCTCATAATAGATGGTGCAA 60.469 37.037 0.00 0.00 0.00 4.08
202 204 6.016860 GCAAATGTCTCATAATAGATGGTGCA 60.017 38.462 0.00 0.00 0.00 4.57
203 205 6.016860 TGCAAATGTCTCATAATAGATGGTGC 60.017 38.462 0.00 0.00 0.00 5.01
205 207 8.701908 AATGCAAATGTCTCATAATAGATGGT 57.298 30.769 0.00 0.00 0.00 3.55
206 208 8.789762 TGAATGCAAATGTCTCATAATAGATGG 58.210 33.333 0.00 0.00 0.00 3.51
254 258 0.629596 TGTCCATACTCCCTCCGTCT 59.370 55.000 0.00 0.00 0.00 4.18
258 262 1.490910 CCCTTTGTCCATACTCCCTCC 59.509 57.143 0.00 0.00 0.00 4.30
285 289 9.267096 GACTTCGAAAAGACATATGACAAAATC 57.733 33.333 10.38 0.00 36.30 2.17
299 303 4.439563 GCAAAAAGGTGGACTTCGAAAAGA 60.440 41.667 0.00 0.00 38.85 2.52
306 310 1.266989 CTCGGCAAAAAGGTGGACTTC 59.733 52.381 0.00 0.00 38.85 3.01
308 312 0.472471 TCTCGGCAAAAAGGTGGACT 59.528 50.000 0.00 0.00 0.00 3.85
339 344 5.179045 ACAGAGTGATGCTTTTCAAAGTG 57.821 39.130 1.37 0.00 38.28 3.16
374 381 7.716799 TTTACATGAGGCCTTGAATACAATT 57.283 32.000 6.77 0.00 35.37 2.32
386 393 3.119137 GGGTGTTGATTTTACATGAGGCC 60.119 47.826 0.00 0.00 0.00 5.19
455 488 4.755123 AGTGAGGTCGTACAATTTTTGAGG 59.245 41.667 0.00 0.00 0.00 3.86
456 489 5.924475 AGTGAGGTCGTACAATTTTTGAG 57.076 39.130 0.00 0.00 0.00 3.02
462 495 5.979288 AGACTTAGTGAGGTCGTACAATT 57.021 39.130 0.00 0.00 37.52 2.32
470 503 9.127277 ACTCTTATGAATAGACTTAGTGAGGTC 57.873 37.037 0.00 0.00 0.00 3.85
472 505 9.349713 AGACTCTTATGAATAGACTTAGTGAGG 57.650 37.037 0.00 0.00 0.00 3.86
548 581 8.062065 AGACTAAAGGTGTCAAACAAATTCAA 57.938 30.769 0.00 0.00 36.94 2.69
632 666 4.020928 TGTCGCACTTATCAAGGTCCTTTA 60.021 41.667 0.00 0.00 0.00 1.85
636 670 2.000447 GTGTCGCACTTATCAAGGTCC 59.000 52.381 3.20 0.00 0.00 4.46
637 671 1.654105 CGTGTCGCACTTATCAAGGTC 59.346 52.381 8.07 0.00 31.34 3.85
638 672 1.000506 ACGTGTCGCACTTATCAAGGT 59.999 47.619 8.07 0.00 31.34 3.50
639 673 1.390123 CACGTGTCGCACTTATCAAGG 59.610 52.381 7.58 0.00 31.34 3.61
640 674 2.058798 ACACGTGTCGCACTTATCAAG 58.941 47.619 17.22 0.00 31.34 3.02
641 675 1.790043 CACACGTGTCGCACTTATCAA 59.210 47.619 20.49 0.00 31.34 2.57
642 676 1.414378 CACACGTGTCGCACTTATCA 58.586 50.000 20.49 0.00 31.34 2.15
643 677 0.713883 CCACACGTGTCGCACTTATC 59.286 55.000 20.49 0.00 31.34 1.75
645 679 1.952133 GCCACACGTGTCGCACTTA 60.952 57.895 29.63 0.00 31.34 2.24
646 680 3.269347 GCCACACGTGTCGCACTT 61.269 61.111 29.63 0.00 31.34 3.16
647 681 4.522689 TGCCACACGTGTCGCACT 62.523 61.111 32.62 2.22 31.34 4.40
648 682 4.293626 GTGCCACACGTGTCGCAC 62.294 66.667 41.21 41.21 39.94 5.34
657 691 8.850454 AAAATTATTATATGTTCGTGCCACAC 57.150 30.769 0.00 0.00 0.00 3.82
682 716 9.719279 CCACTAAACTTGTCATAAAAACGTTTA 57.281 29.630 15.03 0.00 33.76 2.01
683 717 8.245491 ACCACTAAACTTGTCATAAAAACGTTT 58.755 29.630 7.96 7.96 0.00 3.60
684 718 7.698970 CACCACTAAACTTGTCATAAAAACGTT 59.301 33.333 0.00 0.00 0.00 3.99
685 719 7.190871 CACCACTAAACTTGTCATAAAAACGT 58.809 34.615 0.00 0.00 0.00 3.99
686 720 6.141685 GCACCACTAAACTTGTCATAAAAACG 59.858 38.462 0.00 0.00 0.00 3.60
687 721 6.141685 CGCACCACTAAACTTGTCATAAAAAC 59.858 38.462 0.00 0.00 0.00 2.43
688 722 6.038382 TCGCACCACTAAACTTGTCATAAAAA 59.962 34.615 0.00 0.00 0.00 1.94
689 723 5.527951 TCGCACCACTAAACTTGTCATAAAA 59.472 36.000 0.00 0.00 0.00 1.52
690 724 5.057819 TCGCACCACTAAACTTGTCATAAA 58.942 37.500 0.00 0.00 0.00 1.40
691 725 4.633175 TCGCACCACTAAACTTGTCATAA 58.367 39.130 0.00 0.00 0.00 1.90
692 726 4.021807 TCTCGCACCACTAAACTTGTCATA 60.022 41.667 0.00 0.00 0.00 2.15
693 727 3.067106 CTCGCACCACTAAACTTGTCAT 58.933 45.455 0.00 0.00 0.00 3.06
694 728 2.101750 TCTCGCACCACTAAACTTGTCA 59.898 45.455 0.00 0.00 0.00 3.58
695 729 2.750948 TCTCGCACCACTAAACTTGTC 58.249 47.619 0.00 0.00 0.00 3.18
696 730 2.902705 TCTCGCACCACTAAACTTGT 57.097 45.000 0.00 0.00 0.00 3.16
697 731 3.120199 CCATTCTCGCACCACTAAACTTG 60.120 47.826 0.00 0.00 0.00 3.16
698 732 3.074412 CCATTCTCGCACCACTAAACTT 58.926 45.455 0.00 0.00 0.00 2.66
699 733 2.699954 CCATTCTCGCACCACTAAACT 58.300 47.619 0.00 0.00 0.00 2.66
700 734 1.130561 GCCATTCTCGCACCACTAAAC 59.869 52.381 0.00 0.00 0.00 2.01
701 735 1.271108 TGCCATTCTCGCACCACTAAA 60.271 47.619 0.00 0.00 0.00 1.85
702 736 0.323302 TGCCATTCTCGCACCACTAA 59.677 50.000 0.00 0.00 0.00 2.24
703 737 0.323302 TTGCCATTCTCGCACCACTA 59.677 50.000 0.00 0.00 35.56 2.74
704 738 0.322816 ATTGCCATTCTCGCACCACT 60.323 50.000 0.00 0.00 35.56 4.00
705 739 0.527565 AATTGCCATTCTCGCACCAC 59.472 50.000 0.00 0.00 35.56 4.16
706 740 1.255882 AAATTGCCATTCTCGCACCA 58.744 45.000 0.00 0.00 35.56 4.17
707 741 2.368655 AAAATTGCCATTCTCGCACC 57.631 45.000 0.00 0.00 35.56 5.01
708 742 4.096732 ACTAAAATTGCCATTCTCGCAC 57.903 40.909 0.00 0.00 35.56 5.34
709 743 4.782019 AACTAAAATTGCCATTCTCGCA 57.218 36.364 0.00 0.00 0.00 5.10
710 744 6.494842 TGATAACTAAAATTGCCATTCTCGC 58.505 36.000 0.00 0.00 0.00 5.03
711 745 8.909708 TTTGATAACTAAAATTGCCATTCTCG 57.090 30.769 0.00 0.00 0.00 4.04
788 880 5.945784 ACAGGTTGGTAGTAGTGTCGTTATA 59.054 40.000 0.00 0.00 0.00 0.98
793 885 4.397103 TCATACAGGTTGGTAGTAGTGTCG 59.603 45.833 0.00 0.00 0.00 4.35
849 944 7.169158 AGCTTGGAATTTTTCGGAATGATTA 57.831 32.000 0.00 0.00 0.00 1.75
852 947 5.010516 TGAAGCTTGGAATTTTTCGGAATGA 59.989 36.000 2.10 0.00 0.00 2.57
853 948 5.229423 TGAAGCTTGGAATTTTTCGGAATG 58.771 37.500 2.10 0.00 0.00 2.67
855 950 4.582656 TCTGAAGCTTGGAATTTTTCGGAA 59.417 37.500 2.10 0.00 32.02 4.30
856 951 4.023193 GTCTGAAGCTTGGAATTTTTCGGA 60.023 41.667 2.10 0.00 32.39 4.55
857 952 4.229876 GTCTGAAGCTTGGAATTTTTCGG 58.770 43.478 2.10 0.00 0.00 4.30
858 953 3.908382 CGTCTGAAGCTTGGAATTTTTCG 59.092 43.478 2.10 0.00 0.00 3.46
859 954 4.023193 TCCGTCTGAAGCTTGGAATTTTTC 60.023 41.667 2.10 0.00 0.00 2.29
909 1033 4.082895 ACGTCTGTGTATTCAGTGGTAGAC 60.083 45.833 0.00 0.00 36.85 2.59
976 1100 6.239176 GGGTAGATTCTGGAGTTGTAGATCAG 60.239 46.154 0.00 0.00 0.00 2.90
1499 1631 1.606668 GACGCGATCTTGGAGATCTCT 59.393 52.381 21.81 1.63 46.83 3.10
1719 3101 1.626686 TCATTCCGGTGCACCAAATT 58.373 45.000 34.16 15.16 35.14 1.82
1720 3102 1.626686 TTCATTCCGGTGCACCAAAT 58.373 45.000 34.16 27.33 35.14 2.32
1721 3103 1.403814 TTTCATTCCGGTGCACCAAA 58.596 45.000 34.16 26.42 35.14 3.28
1731 3113 0.732571 CGTCCACCCATTTCATTCCG 59.267 55.000 0.00 0.00 0.00 4.30
1772 3154 5.123979 ACTTTCTTCATTAATCGGCAGTTCC 59.876 40.000 0.00 0.00 0.00 3.62
1773 3155 6.183309 ACTTTCTTCATTAATCGGCAGTTC 57.817 37.500 0.00 0.00 0.00 3.01
1774 3156 7.103641 TCTACTTTCTTCATTAATCGGCAGTT 58.896 34.615 0.00 0.00 0.00 3.16
1775 3157 6.640518 TCTACTTTCTTCATTAATCGGCAGT 58.359 36.000 0.00 0.00 0.00 4.40
1776 3158 7.571026 CATCTACTTTCTTCATTAATCGGCAG 58.429 38.462 0.00 0.00 0.00 4.85
1777 3159 6.017934 GCATCTACTTTCTTCATTAATCGGCA 60.018 38.462 0.00 0.00 0.00 5.69
1778 3160 6.203723 AGCATCTACTTTCTTCATTAATCGGC 59.796 38.462 0.00 0.00 0.00 5.54
1779 3161 7.307632 CCAGCATCTACTTTCTTCATTAATCGG 60.308 40.741 0.00 0.00 0.00 4.18
1780 3162 7.439356 TCCAGCATCTACTTTCTTCATTAATCG 59.561 37.037 0.00 0.00 0.00 3.34
1848 3230 5.853282 GTGCGCATATCAATTAATTCAGGAC 59.147 40.000 15.91 0.00 0.00 3.85
1859 3241 4.310769 GACTCTAAGGTGCGCATATCAAT 58.689 43.478 15.91 0.00 0.00 2.57
1872 3256 2.458620 AGGAGTTTCGGGACTCTAAGG 58.541 52.381 15.44 0.00 44.32 2.69
1883 3267 2.288273 ACCAGTCGAGAAAGGAGTTTCG 60.288 50.000 0.00 0.00 45.90 3.46
1884 3268 3.388345 ACCAGTCGAGAAAGGAGTTTC 57.612 47.619 0.00 0.00 42.25 2.78
1938 3322 3.625897 CCAGAGTGCACGTGGGGA 61.626 66.667 25.81 0.00 0.00 4.81
2027 3412 4.358851 GTGTACAAGCAATGCAGAACAAA 58.641 39.130 8.35 0.00 0.00 2.83
2030 3415 2.554032 AGGTGTACAAGCAATGCAGAAC 59.446 45.455 8.35 0.45 0.00 3.01
2035 3420 0.883833 AGCAGGTGTACAAGCAATGC 59.116 50.000 15.77 12.67 35.09 3.56
2037 3422 1.888512 CCAAGCAGGTGTACAAGCAAT 59.111 47.619 15.77 4.54 0.00 3.56
2173 3558 6.801539 TGGTGCTTAAGAGTTAAGACATTG 57.198 37.500 6.67 0.00 44.19 2.82
2223 3608 1.067974 CCGATGGAGCGTGGTATTACA 59.932 52.381 0.00 0.00 0.00 2.41
2239 3624 4.335594 GCTGTGGAAAGCTATAAAACCGAT 59.664 41.667 0.00 0.00 40.20 4.18
2355 3740 0.107703 TCTGCAGCAATAGGGGAACG 60.108 55.000 9.47 0.00 0.00 3.95
2473 3859 2.561419 GGCGTAGAGAGGGTATGCATAA 59.439 50.000 8.28 0.00 34.59 1.90
2508 3894 3.181467 CCAACAAAGCATCAGGAAACCAA 60.181 43.478 0.00 0.00 0.00 3.67
2735 4121 6.315642 AGAAACATGCTTCACTCATATCAGTG 59.684 38.462 11.27 0.00 44.61 3.66
3043 6663 6.442541 TGTAAAGGGACCAAATAGTTCTCA 57.557 37.500 0.00 0.00 0.00 3.27
3177 6797 8.364142 TCCATTTTGTTCCCAAACTAAACATAG 58.636 33.333 1.18 0.00 40.93 2.23
3179 6799 7.130681 TCCATTTTGTTCCCAAACTAAACAT 57.869 32.000 1.18 0.00 40.93 2.71
3263 6883 5.055144 GGTCACCTAATTATCCGAAGTTCC 58.945 45.833 0.00 0.00 0.00 3.62
3264 6884 5.753921 CAGGTCACCTAATTATCCGAAGTTC 59.246 44.000 0.00 0.00 29.64 3.01
3265 6885 5.189145 ACAGGTCACCTAATTATCCGAAGTT 59.811 40.000 0.00 0.00 29.64 2.66
3266 6886 4.715297 ACAGGTCACCTAATTATCCGAAGT 59.285 41.667 0.00 0.00 29.64 3.01
3267 6887 5.277857 ACAGGTCACCTAATTATCCGAAG 57.722 43.478 0.00 0.00 29.64 3.79
3268 6888 5.303589 CCTACAGGTCACCTAATTATCCGAA 59.696 44.000 0.00 0.00 29.64 4.30
3269 6889 4.831155 CCTACAGGTCACCTAATTATCCGA 59.169 45.833 0.00 0.00 29.64 4.55
3270 6890 4.021368 CCCTACAGGTCACCTAATTATCCG 60.021 50.000 0.00 0.00 29.64 4.18
3285 6905 2.489329 CACTGAAATGCAACCCTACAGG 59.511 50.000 0.00 0.00 43.78 4.00
3286 6906 3.149196 ACACTGAAATGCAACCCTACAG 58.851 45.455 0.00 0.00 0.00 2.74
3287 6907 3.222173 ACACTGAAATGCAACCCTACA 57.778 42.857 0.00 0.00 0.00 2.74
3289 6909 3.320541 CCAAACACTGAAATGCAACCCTA 59.679 43.478 0.00 0.00 0.00 3.53
3327 6948 3.794138 GCGACCTGAACCAAATTCGTTTT 60.794 43.478 0.00 0.00 40.56 2.43
3328 6949 2.287368 GCGACCTGAACCAAATTCGTTT 60.287 45.455 0.00 0.00 40.56 3.60
3331 6952 0.168128 GGCGACCTGAACCAAATTCG 59.832 55.000 0.00 0.00 40.56 3.34
3431 7060 6.339730 ACAATTGACATTTTTGCTCAGTTCA 58.660 32.000 13.59 0.00 0.00 3.18
3437 7068 8.981647 ACTGAAATACAATTGACATTTTTGCTC 58.018 29.630 13.59 5.99 0.00 4.26
3494 7125 4.885907 TCCTACTTAGTCGGATCGTTTGAT 59.114 41.667 1.17 0.00 37.60 2.57
3581 7215 8.516234 GTCTGAACTCTGAACTATGAACTCTTA 58.484 37.037 0.00 0.00 0.00 2.10
3582 7216 7.232534 AGTCTGAACTCTGAACTATGAACTCTT 59.767 37.037 0.00 0.00 0.00 2.85
3583 7217 6.719370 AGTCTGAACTCTGAACTATGAACTCT 59.281 38.462 0.00 0.00 0.00 3.24
3584 7218 6.919721 AGTCTGAACTCTGAACTATGAACTC 58.080 40.000 0.00 0.00 0.00 3.01
3585 7219 6.909550 AGTCTGAACTCTGAACTATGAACT 57.090 37.500 0.00 0.00 0.00 3.01
3692 8215 6.602406 ACAGAAATGCAAGCAAGAGAGAATAT 59.398 34.615 0.00 0.00 0.00 1.28
3839 8391 2.696526 TGGTGTTCTCTACCTCAGGT 57.303 50.000 0.00 0.00 39.01 4.00
3849 8401 0.524862 CTGCTTGGCATGGTGTTCTC 59.475 55.000 2.33 0.00 38.13 2.87
4056 8609 2.226962 AGCAGCCATGGAAAATCAGT 57.773 45.000 18.40 0.00 0.00 3.41
4081 8634 2.281484 AATGCGACCAGTGGCGTT 60.281 55.556 21.57 6.44 38.43 4.84
4090 8643 1.363744 CTTCCAGTGAGAATGCGACC 58.636 55.000 0.00 0.00 0.00 4.79
4111 8664 0.392193 CAGATGGAAAGAGCAGCGGT 60.392 55.000 0.00 0.00 0.00 5.68
4157 8710 2.091939 CACCACACCCAATCATATCCCA 60.092 50.000 0.00 0.00 0.00 4.37
4198 8760 1.155390 ACAGTTCCACCCCTCTCGA 59.845 57.895 0.00 0.00 0.00 4.04
4225 8787 9.388506 CACACATTCCTCAAAAGAGAATATACT 57.611 33.333 0.00 0.00 0.00 2.12
4276 8840 6.054941 TCCTACACATAGCACATATTGTTGG 58.945 40.000 0.00 0.00 33.90 3.77
4329 8893 4.080863 TGCATTAAGGGTGTGTTTGGTTTT 60.081 37.500 0.00 0.00 0.00 2.43
4393 8966 9.906660 ACGATTTAATCAATTTAAGCAAACAGA 57.093 25.926 5.76 0.00 31.57 3.41
4587 9160 2.750657 GGCATGGGAGGAGTCCAGG 61.751 68.421 12.86 0.00 46.07 4.45
4589 9162 1.541118 TTGGCATGGGAGGAGTCCA 60.541 57.895 12.86 0.00 46.07 4.02
4728 9305 1.452145 GGGGCGCACTGTTTGAAGAA 61.452 55.000 10.74 0.00 0.00 2.52
4743 9320 1.117150 TACGTGATAGAGTTGGGGGC 58.883 55.000 0.00 0.00 0.00 5.80
4744 9321 4.141801 TGAAATACGTGATAGAGTTGGGGG 60.142 45.833 0.00 0.00 0.00 5.40
4764 9341 1.070134 GATCGGGTCCGGAATGATGAA 59.930 52.381 5.23 0.00 40.25 2.57
4780 9357 1.879380 TGGCCACACAAGAAAAGATCG 59.121 47.619 0.00 0.00 0.00 3.69
4878 9455 9.677567 GATCAAGTTTGAAGCAACAATTAAGTA 57.322 29.630 0.00 0.00 41.13 2.24
4903 9480 8.939929 TGTGCATTGAAAAATAAAAACACTTGA 58.060 25.926 0.00 0.00 0.00 3.02
4914 9491 6.714810 ACTCTGGTAGTGTGCATTGAAAAATA 59.285 34.615 0.00 0.00 36.93 1.40
4933 9510 5.188751 AGACCTAAGGAGAAAATCACTCTGG 59.811 44.000 0.00 0.00 35.10 3.86
4988 9566 6.186957 GCATGGGAAAAGGGGAAATTAAAAT 58.813 36.000 0.00 0.00 0.00 1.82
4991 9569 4.171234 TGCATGGGAAAAGGGGAAATTAA 58.829 39.130 0.00 0.00 0.00 1.40
5011 9589 1.765314 TCCCTTGCTTCTAGGATCTGC 59.235 52.381 0.00 0.00 34.56 4.26
5047 9625 4.985409 CCTCGCTTATTCTTAGCCTGTAAG 59.015 45.833 0.00 0.00 35.18 2.34
5084 9662 4.933505 TCGCATTCTCTGATGATTCTCT 57.066 40.909 0.00 0.00 0.00 3.10
5161 9739 6.232581 ACCTCTGATATGGAGACTTCTTTG 57.767 41.667 4.41 0.00 33.03 2.77
5179 9757 1.684983 TCTTCAAACGAACGGACCTCT 59.315 47.619 0.00 0.00 0.00 3.69
5191 9769 1.202722 TCGGAGGTGGGTTCTTCAAAC 60.203 52.381 0.00 0.00 0.00 2.93
5233 9811 2.135933 GTTGACACTGGGAACTTCTCG 58.864 52.381 0.00 0.00 0.00 4.04
5326 9904 1.606601 TCTGGACTGGACGAGTGGG 60.607 63.158 0.00 0.00 33.83 4.61
5335 9913 2.262915 GCGTGGAGTCTGGACTGG 59.737 66.667 8.06 0.00 42.66 4.00
5336 9914 2.262915 GGCGTGGAGTCTGGACTG 59.737 66.667 8.06 0.00 42.66 3.51
5497 10075 2.707039 CCTTTATTGCCGCCGTCG 59.293 61.111 0.00 0.00 0.00 5.12
5500 10078 2.819552 CGACCCTTTATTGCCGCCG 61.820 63.158 0.00 0.00 0.00 6.46
5501 10079 2.478033 CCGACCCTTTATTGCCGCC 61.478 63.158 0.00 0.00 0.00 6.13
5502 10080 2.478033 CCCGACCCTTTATTGCCGC 61.478 63.158 0.00 0.00 0.00 6.53
5668 10259 3.318886 CATCATCATCGCCTCTCAAGAG 58.681 50.000 0.00 0.00 41.71 2.85
5669 10260 2.036862 CCATCATCATCGCCTCTCAAGA 59.963 50.000 0.00 0.00 0.00 3.02
5670 10261 2.036862 TCCATCATCATCGCCTCTCAAG 59.963 50.000 0.00 0.00 0.00 3.02
5671 10262 2.041701 TCCATCATCATCGCCTCTCAA 58.958 47.619 0.00 0.00 0.00 3.02
5672 10263 1.708341 TCCATCATCATCGCCTCTCA 58.292 50.000 0.00 0.00 0.00 3.27
5674 10265 1.204231 CGATCCATCATCATCGCCTCT 59.796 52.381 0.00 0.00 35.84 3.69
5675 10266 1.067283 ACGATCCATCATCATCGCCTC 60.067 52.381 1.34 0.00 44.74 4.70
5676 10267 0.972134 ACGATCCATCATCATCGCCT 59.028 50.000 1.34 0.00 44.74 5.52
5677 10268 1.073964 CACGATCCATCATCATCGCC 58.926 55.000 1.34 0.00 44.74 5.54
5678 10269 1.073964 CCACGATCCATCATCATCGC 58.926 55.000 1.34 0.00 44.74 4.58
5679 10270 2.730550 TCCACGATCCATCATCATCG 57.269 50.000 0.00 0.00 46.03 3.84
5694 10285 1.451028 CTAGCCAGCCAGCTTCCAC 60.451 63.158 3.07 0.00 41.41 4.02
5727 10318 4.625083 GCTTCTCTTCTAATTCAGGCCAGT 60.625 45.833 5.01 0.00 0.00 4.00
5731 10322 4.256920 TGTGCTTCTCTTCTAATTCAGGC 58.743 43.478 0.00 0.00 0.00 4.85
5758 10349 4.971830 CGTACTTGCTTGCCATCATTATTG 59.028 41.667 0.00 0.00 0.00 1.90
5774 10370 6.020916 CCAAACGATACAGATGTACGTACTTG 60.021 42.308 25.12 20.83 37.31 3.16
5838 10434 2.357154 GCCAGGTTGGTTCATACAGGAT 60.357 50.000 0.00 0.00 40.46 3.24
5874 10475 2.436646 CCCACACAGATGGACGGC 60.437 66.667 0.00 0.00 43.02 5.68
5886 10487 0.683828 CCTGCACCATTATGCCCACA 60.684 55.000 0.00 0.00 45.50 4.17
5938 10540 1.407618 GAACCCAAACCGAAGTGCTTT 59.592 47.619 0.00 0.00 0.00 3.51
6042 10663 2.416547 CAGCATGTACTACCACAAGTGC 59.583 50.000 0.00 0.00 35.57 4.40
6119 10740 3.246619 CTGTAGTTCGAAGAAGCTGGAC 58.753 50.000 0.00 0.00 45.90 4.02
6136 10757 6.134055 ACCAGCAACCTCACTATATACTGTA 58.866 40.000 0.00 0.00 0.00 2.74
6137 10758 4.962995 ACCAGCAACCTCACTATATACTGT 59.037 41.667 0.00 0.00 0.00 3.55
6138 10759 5.537300 ACCAGCAACCTCACTATATACTG 57.463 43.478 0.00 0.00 0.00 2.74
6139 10760 6.040616 GTGTACCAGCAACCTCACTATATACT 59.959 42.308 0.00 0.00 0.00 2.12
6140 10761 6.214399 GTGTACCAGCAACCTCACTATATAC 58.786 44.000 0.00 0.00 0.00 1.47
6219 10922 4.722855 GCATGCCCACACGCCAAC 62.723 66.667 6.36 0.00 0.00 3.77
6222 10925 4.197498 GATGCATGCCCACACGCC 62.197 66.667 16.68 0.00 0.00 5.68
6223 10926 3.117175 GAGATGCATGCCCACACGC 62.117 63.158 16.68 0.19 0.00 5.34
6224 10927 2.816360 CGAGATGCATGCCCACACG 61.816 63.158 16.68 12.46 0.00 4.49
6225 10928 3.104766 CGAGATGCATGCCCACAC 58.895 61.111 16.68 4.39 0.00 3.82
6226 10929 2.825387 GCGAGATGCATGCCCACA 60.825 61.111 16.68 0.00 45.45 4.17
6227 10930 3.945434 CGCGAGATGCATGCCCAC 61.945 66.667 16.68 6.50 46.97 4.61
6250 10953 1.517276 GATTCCGTATCACTTCGCGTG 59.483 52.381 5.77 2.81 45.18 5.34
6255 10958 3.114065 GTGGTCGATTCCGTATCACTTC 58.886 50.000 0.00 0.00 37.05 3.01
6275 10978 0.099968 CCGGTGATCACATACGACGT 59.900 55.000 26.47 5.52 33.46 4.34
6283 10986 2.511373 GATGCGCCGGTGATCACA 60.511 61.111 26.47 7.43 0.00 3.58
6285 10988 2.106938 GAGATGCGCCGGTGATCA 59.893 61.111 21.76 8.70 0.00 2.92
6298 11001 1.379443 TACGGCGGTCCAGTGAGAT 60.379 57.895 13.24 0.00 0.00 2.75
6327 11030 2.283604 TCGGGTGCAGGAGTAGCA 60.284 61.111 0.00 0.00 40.19 3.49
6375 11082 4.446413 CGTCCGTGTAGGTGCCCC 62.446 72.222 0.00 0.00 41.99 5.80
6426 11133 2.303175 CCCTTTCTTGTTCGTTTGGGA 58.697 47.619 0.00 0.00 35.64 4.37
6427 11134 1.339929 CCCCTTTCTTGTTCGTTTGGG 59.660 52.381 0.00 0.00 0.00 4.12
6479 11942 1.474332 CCAGGGTTGCACTTGCCAAT 61.474 55.000 0.00 0.00 41.18 3.16
6480 11943 2.132996 CCAGGGTTGCACTTGCCAA 61.133 57.895 0.00 0.00 41.18 4.52
6481 11944 2.521465 CCAGGGTTGCACTTGCCA 60.521 61.111 0.00 0.00 41.18 4.92
6482 11945 3.305516 CCCAGGGTTGCACTTGCC 61.306 66.667 0.00 0.00 41.18 4.52
6483 11946 3.305516 CCCCAGGGTTGCACTTGC 61.306 66.667 4.22 0.00 42.50 4.01
6484 11947 0.967380 GATCCCCAGGGTTGCACTTG 60.967 60.000 4.22 0.00 36.47 3.16
6485 11948 1.384191 GATCCCCAGGGTTGCACTT 59.616 57.895 4.22 0.00 36.47 3.16
6486 11949 2.971598 CGATCCCCAGGGTTGCACT 61.972 63.158 4.22 0.00 36.47 4.40
6488 11951 3.727258 CCGATCCCCAGGGTTGCA 61.727 66.667 4.22 0.00 36.47 4.08
6490 11953 4.506255 GGCCGATCCCCAGGGTTG 62.506 72.222 4.22 0.00 36.47 3.77
6566 12072 0.232303 CGGATAAAACATCGCTCCGC 59.768 55.000 0.00 0.00 41.95 5.54
6652 12158 1.755008 CTCTCCCTCCCCGTCAGTC 60.755 68.421 0.00 0.00 0.00 3.51
6823 12342 2.740256 GCTGAACCGAGGGAGAAGAATC 60.740 54.545 0.00 0.00 0.00 2.52
6874 12393 0.100682 TCTCTGTATCCGCGTTCAGC 59.899 55.000 4.92 0.00 43.95 4.26
6896 12415 2.158696 AGCCACAGTCTGAAGCTCTTTT 60.159 45.455 6.91 0.00 0.00 2.27
6915 12434 2.884207 GCGTACGTAGCCACCAGC 60.884 66.667 17.90 0.00 44.25 4.85
6917 12436 2.879907 GAGCGTACGTAGCCACCA 59.120 61.111 17.90 0.00 34.64 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.