Multiple sequence alignment - TraesCS1A01G330400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G330400 chr1A 100.000 3309 0 0 1 3309 518989201 518985893 0.000000e+00 6111.0
1 TraesCS1A01G330400 chr1A 96.259 294 11 0 2915 3208 282546239 282546532 1.790000e-132 483.0
2 TraesCS1A01G330400 chr1A 96.259 294 10 1 2915 3207 369512496 369512789 6.420000e-132 481.0
3 TraesCS1A01G330400 chr1A 94.137 307 18 0 2576 2882 274685767 274686073 5.000000e-128 468.0
4 TraesCS1A01G330400 chr1A 93.160 307 21 0 2576 2882 152545573 152545879 5.040000e-123 451.0
5 TraesCS1A01G330400 chr1D 93.863 2591 86 24 1 2541 423059646 423057079 0.000000e+00 3836.0
6 TraesCS1A01G330400 chr1B 93.062 2580 119 22 1 2546 572311462 572308909 0.000000e+00 3718.0
7 TraesCS1A01G330400 chr1B 96.865 319 10 0 2575 2893 480414202 480413884 4.860000e-148 534.0
8 TraesCS1A01G330400 chr3A 92.553 2041 111 18 525 2536 707124454 707126482 0.000000e+00 2889.0
9 TraesCS1A01G330400 chr3A 95.765 307 13 0 2576 2882 627820814 627821120 2.290000e-136 496.0
10 TraesCS1A01G330400 chr3A 93.210 324 19 3 2575 2896 114774712 114775034 1.070000e-129 473.0
11 TraesCS1A01G330400 chr3A 92.073 328 21 3 2570 2896 428441625 428441302 1.080000e-124 457.0
12 TraesCS1A01G330400 chr3D 92.406 2041 114 16 525 2536 573119657 573121685 0.000000e+00 2872.0
13 TraesCS1A01G330400 chr3D 84.709 327 47 3 2570 2896 467158632 467158309 1.150000e-84 324.0
14 TraesCS1A01G330400 chr3B 91.874 2006 120 20 525 2508 762307112 762309096 0.000000e+00 2761.0
15 TraesCS1A01G330400 chr7D 92.822 822 47 7 657 1473 139369690 139368876 0.000000e+00 1181.0
16 TraesCS1A01G330400 chr7D 91.216 148 13 0 398 545 139369858 139369711 5.600000e-48 202.0
17 TraesCS1A01G330400 chr4A 90.534 824 64 7 657 1473 220627990 220627174 0.000000e+00 1077.0
18 TraesCS1A01G330400 chr4A 97.771 314 7 0 2570 2883 57414019 57414332 2.900000e-150 542.0
19 TraesCS1A01G330400 chr4A 96.928 293 9 0 2915 3207 590230514 590230222 2.970000e-135 492.0
20 TraesCS1A01G330400 chr7A 98.706 309 4 0 2575 2883 167863618 167863310 1.740000e-152 549.0
21 TraesCS1A01G330400 chr7A 97.452 314 8 0 2570 2883 166489832 166489519 1.350000e-148 536.0
22 TraesCS1A01G330400 chr7A 96.573 321 9 2 2576 2895 40456571 40456890 6.290000e-147 531.0
23 TraesCS1A01G330400 chr2A 98.706 309 4 0 2575 2883 597847812 597848120 1.740000e-152 549.0
24 TraesCS1A01G330400 chr2A 99.016 305 3 0 2578 2882 486909068 486908764 6.240000e-152 547.0
25 TraesCS1A01G330400 chr2A 98.371 307 5 0 2577 2883 18596996 18596690 1.040000e-149 540.0
26 TraesCS1A01G330400 chr2A 91.358 162 11 2 1315 1473 315573675 315573836 5.560000e-53 219.0
27 TraesCS1A01G330400 chr6B 98.382 309 5 0 2575 2883 547713647 547713955 8.080000e-151 544.0
28 TraesCS1A01G330400 chr6B 80.769 104 16 4 3208 3309 477698962 477699063 9.840000e-11 78.7
29 TraesCS1A01G330400 chr5A 97.468 316 7 1 2569 2883 660449489 660449804 3.760000e-149 538.0
30 TraesCS1A01G330400 chr5A 96.575 292 10 0 2915 3206 121639755 121639464 4.960000e-133 484.0
31 TraesCS1A01G330400 chr5A 96.575 292 10 0 2915 3206 423672852 423672561 4.960000e-133 484.0
32 TraesCS1A01G330400 chr6A 97.945 292 6 0 2915 3206 359051331 359051622 1.060000e-139 507.0
33 TraesCS1A01G330400 chr6A 94.495 327 17 1 2571 2896 86115307 86115633 1.370000e-138 503.0
34 TraesCS1A01G330400 chr6A 96.575 292 10 0 2915 3206 546707212 546707503 4.960000e-133 484.0
35 TraesCS1A01G330400 chr6A 90.997 311 27 1 2574 2883 175623513 175623823 5.110000e-113 418.0
36 TraesCS1A01G330400 chr6A 92.593 162 9 2 1315 1473 395653971 395654132 2.570000e-56 230.0
37 TraesCS1A01G330400 chr6A 80.952 105 15 5 3208 3309 446527095 446527197 9.840000e-11 78.7
38 TraesCS1A01G330400 chr5B 96.918 292 9 0 2915 3206 90506855 90506564 1.070000e-134 490.0
39 TraesCS1A01G330400 chr7B 94.516 310 14 3 2915 3221 462883198 462882889 2.990000e-130 475.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G330400 chr1A 518985893 518989201 3308 True 6111.0 6111 100.000 1 3309 1 chr1A.!!$R1 3308
1 TraesCS1A01G330400 chr1D 423057079 423059646 2567 True 3836.0 3836 93.863 1 2541 1 chr1D.!!$R1 2540
2 TraesCS1A01G330400 chr1B 572308909 572311462 2553 True 3718.0 3718 93.062 1 2546 1 chr1B.!!$R2 2545
3 TraesCS1A01G330400 chr3A 707124454 707126482 2028 False 2889.0 2889 92.553 525 2536 1 chr3A.!!$F3 2011
4 TraesCS1A01G330400 chr3D 573119657 573121685 2028 False 2872.0 2872 92.406 525 2536 1 chr3D.!!$F1 2011
5 TraesCS1A01G330400 chr3B 762307112 762309096 1984 False 2761.0 2761 91.874 525 2508 1 chr3B.!!$F1 1983
6 TraesCS1A01G330400 chr7D 139368876 139369858 982 True 691.5 1181 92.019 398 1473 2 chr7D.!!$R1 1075
7 TraesCS1A01G330400 chr4A 220627174 220627990 816 True 1077.0 1077 90.534 657 1473 1 chr4A.!!$R1 816

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
962 1042 0.618458 TGGCGGCCTGATTAAGACTT 59.382 50.0 21.46 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2871 2977 0.036875 AAACTCCGAGGCCTCCTTTG 59.963 55.0 27.2 16.2 31.76 2.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 113 4.043100 AGCAGCAGCAGGGCATCA 62.043 61.111 3.17 0.00 45.49 3.07
225 264 2.202756 CGAGGTAGTTGCCCGCTC 60.203 66.667 0.00 0.00 0.00 5.03
229 268 3.712907 GTAGTTGCCCGCTCCCCA 61.713 66.667 0.00 0.00 0.00 4.96
317 367 1.006639 TGGTTAGGATTTGGGGCTTCC 59.993 52.381 0.00 0.00 0.00 3.46
340 390 4.644234 CAGTATCATATCTCTGGGCGATCT 59.356 45.833 0.00 0.00 0.00 2.75
344 394 1.621992 TATCTCTGGGCGATCTGGTC 58.378 55.000 0.00 0.00 0.00 4.02
386 436 2.138596 ATGCTGCAAGTTTTCGGTTG 57.861 45.000 6.36 0.00 35.30 3.77
443 493 3.907474 TCTGTGTCAGAGGTGGGAAAATA 59.093 43.478 0.00 0.00 35.39 1.40
458 508 4.053983 GGAAAATATCGAACCGACCTACC 58.946 47.826 0.00 0.00 39.18 3.18
488 538 4.039245 TGCTTACCCGGATCTCTAGAATTG 59.961 45.833 0.73 0.00 0.00 2.32
506 556 7.283625 AGAATTGTTGCCAATGTGTAGTTAA 57.716 32.000 0.00 0.00 40.42 2.01
512 562 7.144661 TGTTGCCAATGTGTAGTTAATTCTTG 58.855 34.615 0.00 0.00 0.00 3.02
513 563 5.708948 TGCCAATGTGTAGTTAATTCTTGC 58.291 37.500 0.00 0.00 0.00 4.01
514 564 5.476599 TGCCAATGTGTAGTTAATTCTTGCT 59.523 36.000 0.00 0.00 0.00 3.91
515 565 6.015519 TGCCAATGTGTAGTTAATTCTTGCTT 60.016 34.615 0.00 0.00 0.00 3.91
516 566 7.175816 TGCCAATGTGTAGTTAATTCTTGCTTA 59.824 33.333 0.00 0.00 0.00 3.09
517 567 7.484959 GCCAATGTGTAGTTAATTCTTGCTTAC 59.515 37.037 0.00 0.00 0.00 2.34
518 568 8.511321 CCAATGTGTAGTTAATTCTTGCTTACA 58.489 33.333 0.00 0.00 0.00 2.41
519 569 9.546909 CAATGTGTAGTTAATTCTTGCTTACAG 57.453 33.333 0.00 0.00 0.00 2.74
520 570 8.848474 ATGTGTAGTTAATTCTTGCTTACAGT 57.152 30.769 0.00 0.00 0.00 3.55
521 571 8.671384 TGTGTAGTTAATTCTTGCTTACAGTT 57.329 30.769 0.00 0.00 0.00 3.16
522 572 9.767228 TGTGTAGTTAATTCTTGCTTACAGTTA 57.233 29.630 0.00 0.00 0.00 2.24
550 617 2.488153 GGGATGTAAAGGTTGTGACAGC 59.512 50.000 0.00 0.00 0.00 4.40
703 780 4.081406 TGTTGGTCTTTCCATCTCCATTG 58.919 43.478 0.00 0.00 46.60 2.82
704 781 4.202556 TGTTGGTCTTTCCATCTCCATTGA 60.203 41.667 0.00 0.00 46.60 2.57
705 782 4.226427 TGGTCTTTCCATCTCCATTGAG 57.774 45.455 0.00 0.00 41.93 3.02
706 783 2.948315 GGTCTTTCCATCTCCATTGAGC 59.052 50.000 0.00 0.00 35.94 4.26
707 784 3.614092 GTCTTTCCATCTCCATTGAGCA 58.386 45.455 0.00 0.00 38.58 4.26
775 852 7.362315 CCTGTGTTAAATTGCTCATGAGATCAA 60.362 37.037 27.04 20.38 34.70 2.57
851 929 3.888930 ACCGGTGAATGATCAGTGTTTTT 59.111 39.130 6.12 0.00 35.88 1.94
870 948 8.612619 GTGTTTTTGTCTGTTTCAGATCTTAGA 58.387 33.333 0.00 0.00 42.73 2.10
895 973 5.350547 TCCCTAGAGATGGAAGGAAGAAAA 58.649 41.667 0.00 0.00 0.00 2.29
896 974 5.426833 TCCCTAGAGATGGAAGGAAGAAAAG 59.573 44.000 0.00 0.00 0.00 2.27
927 1007 7.064229 TCATGGTAAACCCTGGTAAATATTCC 58.936 38.462 4.82 0.00 33.21 3.01
962 1042 0.618458 TGGCGGCCTGATTAAGACTT 59.382 50.000 21.46 0.00 0.00 3.01
1059 1144 1.456296 TGCTGACATTCATCTGCACC 58.544 50.000 3.55 0.00 45.33 5.01
1115 1200 1.516386 CGTACACCGTAGCAGCTGG 60.516 63.158 17.12 0.29 0.00 4.85
1173 1260 7.615403 TGATACTCTCCATGTTCTATTATGGC 58.385 38.462 0.00 0.00 42.82 4.40
1528 1618 2.029828 AGTCGAAGCAGTACTTGGAGTG 60.030 50.000 0.00 0.00 43.00 3.51
1630 1720 0.837272 CCCGGGAGAAGATTAAGGCA 59.163 55.000 18.48 0.00 0.00 4.75
1714 1804 3.320826 GTCTACCTGTTTGGGCAATTGTT 59.679 43.478 7.40 0.00 41.11 2.83
2010 2100 1.202627 GCCCTCATGGACTGTGATCTC 60.203 57.143 0.00 0.00 35.39 2.75
2200 2290 3.853355 AAGGCCTCTAACATGGATCTG 57.147 47.619 5.23 0.00 0.00 2.90
2225 2315 3.007473 ACTCCGAAACCTGGAAAACAA 57.993 42.857 0.00 0.00 34.44 2.83
2289 2379 6.800892 GTCATTTTCTTGATCTTCTCAACTGC 59.199 38.462 0.00 0.00 38.97 4.40
2354 2449 1.471119 TCTTCTCATTACGGCGAGGT 58.529 50.000 16.62 0.00 0.00 3.85
2381 2476 6.990349 GGATAGAAAAACGGGAATCTCACATA 59.010 38.462 0.00 0.00 0.00 2.29
2474 2573 7.872993 TGTTAGGAAGAATAACACTTCTCTGTG 59.127 37.037 0.00 0.00 42.07 3.66
2568 2674 9.860650 TGTTATTCCATTATGTTATGTTAGGCT 57.139 29.630 0.00 0.00 0.00 4.58
2573 2679 9.860650 TTCCATTATGTTATGTTAGGCTAATGT 57.139 29.630 10.65 5.04 0.00 2.71
2574 2680 9.860650 TCCATTATGTTATGTTAGGCTAATGTT 57.139 29.630 10.65 1.40 0.00 2.71
2579 2685 7.562454 TGTTATGTTAGGCTAATGTTTAGGC 57.438 36.000 10.65 11.64 40.02 3.93
2580 2686 6.544564 TGTTATGTTAGGCTAATGTTTAGGCC 59.455 38.462 10.65 0.00 44.38 5.19
2587 2693 4.998788 GGCTAATGTTTAGGCCTCTTTTG 58.001 43.478 9.68 2.08 41.20 2.44
2588 2694 4.142160 GGCTAATGTTTAGGCCTCTTTTGG 60.142 45.833 9.68 0.47 41.20 3.28
2589 2695 4.462834 GCTAATGTTTAGGCCTCTTTTGGT 59.537 41.667 9.68 0.00 0.00 3.67
2590 2696 5.047306 GCTAATGTTTAGGCCTCTTTTGGTT 60.047 40.000 9.68 0.00 0.00 3.67
2591 2697 5.468540 AATGTTTAGGCCTCTTTTGGTTC 57.531 39.130 9.68 0.00 0.00 3.62
2592 2698 3.904717 TGTTTAGGCCTCTTTTGGTTCA 58.095 40.909 9.68 0.00 0.00 3.18
2593 2699 4.479158 TGTTTAGGCCTCTTTTGGTTCAT 58.521 39.130 9.68 0.00 0.00 2.57
2594 2700 5.636123 TGTTTAGGCCTCTTTTGGTTCATA 58.364 37.500 9.68 0.00 0.00 2.15
2595 2701 5.710099 TGTTTAGGCCTCTTTTGGTTCATAG 59.290 40.000 9.68 0.00 0.00 2.23
2596 2702 3.372440 AGGCCTCTTTTGGTTCATAGG 57.628 47.619 0.00 0.00 0.00 2.57
2597 2703 2.919602 AGGCCTCTTTTGGTTCATAGGA 59.080 45.455 0.00 0.00 0.00 2.94
2598 2704 3.529319 AGGCCTCTTTTGGTTCATAGGAT 59.471 43.478 0.00 0.00 0.00 3.24
2599 2705 4.726825 AGGCCTCTTTTGGTTCATAGGATA 59.273 41.667 0.00 0.00 0.00 2.59
2600 2706 5.066593 GGCCTCTTTTGGTTCATAGGATAG 58.933 45.833 0.00 0.00 0.00 2.08
2601 2707 5.066593 GCCTCTTTTGGTTCATAGGATAGG 58.933 45.833 0.00 0.00 0.00 2.57
2602 2708 5.163195 GCCTCTTTTGGTTCATAGGATAGGA 60.163 44.000 0.00 0.00 0.00 2.94
2603 2709 6.466470 GCCTCTTTTGGTTCATAGGATAGGAT 60.466 42.308 0.00 0.00 28.27 3.24
2604 2710 7.521669 CCTCTTTTGGTTCATAGGATAGGATT 58.478 38.462 0.00 0.00 28.27 3.01
2605 2711 8.660435 CCTCTTTTGGTTCATAGGATAGGATTA 58.340 37.037 0.00 0.00 28.27 1.75
2612 2718 9.439461 TGGTTCATAGGATAGGATTATCATAGG 57.561 37.037 0.00 0.00 36.37 2.57
2613 2719 9.661954 GGTTCATAGGATAGGATTATCATAGGA 57.338 37.037 0.00 1.09 39.88 2.94
2631 2737 9.621239 ATCATAGGAATAGGAATCTTGTAGGAA 57.379 33.333 0.00 0.00 0.00 3.36
2632 2738 9.447279 TCATAGGAATAGGAATCTTGTAGGAAA 57.553 33.333 0.00 0.00 0.00 3.13
2635 2741 8.337118 AGGAATAGGAATCTTGTAGGAAATGA 57.663 34.615 0.00 0.00 0.00 2.57
2636 2742 8.435982 AGGAATAGGAATCTTGTAGGAAATGAG 58.564 37.037 0.00 0.00 0.00 2.90
2637 2743 8.432805 GGAATAGGAATCTTGTAGGAAATGAGA 58.567 37.037 0.00 0.00 0.00 3.27
2639 2745 9.790344 AATAGGAATCTTGTAGGAAATGAGATG 57.210 33.333 0.00 0.00 0.00 2.90
2640 2746 7.443302 AGGAATCTTGTAGGAAATGAGATGA 57.557 36.000 0.00 0.00 0.00 2.92
2641 2747 7.278875 AGGAATCTTGTAGGAAATGAGATGAC 58.721 38.462 0.00 0.00 0.00 3.06
2642 2748 7.050377 GGAATCTTGTAGGAAATGAGATGACA 58.950 38.462 0.00 0.00 0.00 3.58
2643 2749 7.718753 GGAATCTTGTAGGAAATGAGATGACAT 59.281 37.037 0.00 0.00 0.00 3.06
2644 2750 8.447924 AATCTTGTAGGAAATGAGATGACATG 57.552 34.615 0.00 0.00 0.00 3.21
2645 2751 6.950842 TCTTGTAGGAAATGAGATGACATGT 58.049 36.000 0.00 0.00 0.00 3.21
2646 2752 8.078060 TCTTGTAGGAAATGAGATGACATGTA 57.922 34.615 0.00 0.00 0.00 2.29
2647 2753 8.708378 TCTTGTAGGAAATGAGATGACATGTAT 58.292 33.333 0.00 0.00 0.00 2.29
2648 2754 8.893219 TTGTAGGAAATGAGATGACATGTATC 57.107 34.615 0.00 2.87 0.00 2.24
2649 2755 8.255111 TGTAGGAAATGAGATGACATGTATCT 57.745 34.615 14.05 14.05 37.59 1.98
2650 2756 8.363390 TGTAGGAAATGAGATGACATGTATCTC 58.637 37.037 24.04 24.04 46.82 2.75
2660 2766 9.368674 GAGATGACATGTATCTCAAATCCTATG 57.631 37.037 24.95 0.00 46.22 2.23
2661 2767 9.097946 AGATGACATGTATCTCAAATCCTATGA 57.902 33.333 0.00 0.00 29.05 2.15
2662 2768 9.368674 GATGACATGTATCTCAAATCCTATGAG 57.631 37.037 0.00 0.00 44.53 2.90
2663 2769 8.255111 TGACATGTATCTCAAATCCTATGAGT 57.745 34.615 0.00 0.00 43.77 3.41
2664 2770 9.367160 TGACATGTATCTCAAATCCTATGAGTA 57.633 33.333 0.00 0.00 43.77 2.59
2665 2771 9.853555 GACATGTATCTCAAATCCTATGAGTAG 57.146 37.037 0.00 0.00 43.77 2.57
2682 2788 9.703892 CTATGAGTAGGAATAGGAAACAAGATG 57.296 37.037 0.00 0.00 0.00 2.90
2683 2789 7.496346 TGAGTAGGAATAGGAAACAAGATGT 57.504 36.000 0.00 0.00 0.00 3.06
2684 2790 7.556844 TGAGTAGGAATAGGAAACAAGATGTC 58.443 38.462 0.00 0.00 0.00 3.06
2685 2791 7.180229 TGAGTAGGAATAGGAAACAAGATGTCA 59.820 37.037 0.00 0.00 0.00 3.58
2686 2792 8.095452 AGTAGGAATAGGAAACAAGATGTCAT 57.905 34.615 0.00 0.00 0.00 3.06
2687 2793 8.552296 AGTAGGAATAGGAAACAAGATGTCATT 58.448 33.333 0.00 0.00 0.00 2.57
2688 2794 9.178758 GTAGGAATAGGAAACAAGATGTCATTT 57.821 33.333 0.00 0.00 0.00 2.32
2689 2795 8.059798 AGGAATAGGAAACAAGATGTCATTTG 57.940 34.615 0.00 0.00 0.00 2.32
2690 2796 7.123247 AGGAATAGGAAACAAGATGTCATTTGG 59.877 37.037 10.50 0.00 0.00 3.28
2691 2797 7.093771 GGAATAGGAAACAAGATGTCATTTGGT 60.094 37.037 10.50 3.75 0.00 3.67
2692 2798 7.781324 ATAGGAAACAAGATGTCATTTGGTT 57.219 32.000 9.41 9.41 36.95 3.67
2693 2799 5.846203 AGGAAACAAGATGTCATTTGGTTG 58.154 37.500 12.70 6.32 34.55 3.77
2694 2800 5.598005 AGGAAACAAGATGTCATTTGGTTGA 59.402 36.000 12.70 0.00 34.55 3.18
2695 2801 5.691754 GGAAACAAGATGTCATTTGGTTGAC 59.308 40.000 12.70 0.00 45.05 3.18
2704 2810 5.452078 GTCATTTGGTTGACATCAAAGGA 57.548 39.130 12.16 12.16 44.38 3.36
2705 2811 5.841810 GTCATTTGGTTGACATCAAAGGAA 58.158 37.500 15.68 4.09 42.54 3.36
2706 2812 6.458210 GTCATTTGGTTGACATCAAAGGAAT 58.542 36.000 15.68 0.00 42.54 3.01
2707 2813 6.930722 GTCATTTGGTTGACATCAAAGGAATT 59.069 34.615 15.68 0.00 42.54 2.17
2708 2814 7.442062 GTCATTTGGTTGACATCAAAGGAATTT 59.558 33.333 15.68 0.00 42.54 1.82
2709 2815 7.992033 TCATTTGGTTGACATCAAAGGAATTTT 59.008 29.630 13.20 0.00 39.59 1.82
2710 2816 8.623030 CATTTGGTTGACATCAAAGGAATTTTT 58.377 29.630 9.43 0.00 36.97 1.94
2711 2817 7.784633 TTGGTTGACATCAAAGGAATTTTTC 57.215 32.000 0.00 0.00 37.63 2.29
2726 2832 6.765915 GAATTTTTCCATTGAGTCTAGGCT 57.234 37.500 0.00 0.00 0.00 4.58
2727 2833 6.765915 AATTTTTCCATTGAGTCTAGGCTC 57.234 37.500 17.74 17.74 36.12 4.70
2728 2834 5.505181 TTTTTCCATTGAGTCTAGGCTCT 57.495 39.130 24.20 2.95 36.51 4.09
2729 2835 5.505181 TTTTCCATTGAGTCTAGGCTCTT 57.495 39.130 24.20 9.92 36.51 2.85
2730 2836 5.505181 TTTCCATTGAGTCTAGGCTCTTT 57.495 39.130 24.20 9.56 36.51 2.52
2731 2837 5.505181 TTCCATTGAGTCTAGGCTCTTTT 57.495 39.130 24.20 7.12 36.51 2.27
2732 2838 5.505181 TCCATTGAGTCTAGGCTCTTTTT 57.495 39.130 24.20 4.72 36.51 1.94
2756 2862 9.540538 TTTTATTTTCCTATGAAATGTGGAGGA 57.459 29.630 0.00 0.00 40.08 3.71
2757 2863 9.713684 TTTATTTTCCTATGAAATGTGGAGGAT 57.286 29.630 0.00 0.00 40.08 3.24
2759 2865 8.930846 ATTTTCCTATGAAATGTGGAGGATAG 57.069 34.615 0.00 0.00 40.08 2.08
2760 2866 6.439636 TTCCTATGAAATGTGGAGGATAGG 57.560 41.667 0.00 0.00 36.22 2.57
2761 2867 5.726560 TCCTATGAAATGTGGAGGATAGGA 58.273 41.667 0.00 0.00 39.29 2.94
2762 2868 6.150332 TCCTATGAAATGTGGAGGATAGGAA 58.850 40.000 0.00 0.00 38.86 3.36
2763 2869 6.043243 TCCTATGAAATGTGGAGGATAGGAAC 59.957 42.308 0.00 0.00 38.86 3.62
2764 2870 4.503714 TGAAATGTGGAGGATAGGAACC 57.496 45.455 0.00 0.00 0.00 3.62
2765 2871 3.849574 TGAAATGTGGAGGATAGGAACCA 59.150 43.478 0.00 0.00 0.00 3.67
2766 2872 4.290985 TGAAATGTGGAGGATAGGAACCAA 59.709 41.667 0.00 0.00 34.11 3.67
2767 2873 5.044179 TGAAATGTGGAGGATAGGAACCAAT 60.044 40.000 0.00 0.00 34.11 3.16
2768 2874 4.713792 ATGTGGAGGATAGGAACCAATC 57.286 45.455 0.00 0.00 34.11 2.67
2816 2922 4.713792 ATGAACCATAGGGCTCTAAAGG 57.286 45.455 12.63 12.63 37.90 3.11
2817 2923 3.731431 TGAACCATAGGGCTCTAAAGGA 58.269 45.455 19.31 0.00 37.90 3.36
2818 2924 4.108570 TGAACCATAGGGCTCTAAAGGAA 58.891 43.478 19.31 4.86 37.90 3.36
2819 2925 4.538490 TGAACCATAGGGCTCTAAAGGAAA 59.462 41.667 19.31 4.57 37.90 3.13
2820 2926 5.014755 TGAACCATAGGGCTCTAAAGGAAAA 59.985 40.000 19.31 4.28 37.90 2.29
2821 2927 5.530176 ACCATAGGGCTCTAAAGGAAAAA 57.470 39.130 19.31 0.00 37.90 1.94
2855 2961 9.459094 AAGAATCCTATCCTCTAGAATTCCTTT 57.541 33.333 0.65 0.00 0.00 3.11
2856 2962 8.879227 AGAATCCTATCCTCTAGAATTCCTTTG 58.121 37.037 0.65 0.00 0.00 2.77
2857 2963 8.805145 AATCCTATCCTCTAGAATTCCTTTGA 57.195 34.615 0.65 0.00 0.00 2.69
2858 2964 8.805145 ATCCTATCCTCTAGAATTCCTTTGAA 57.195 34.615 0.65 0.00 34.33 2.69
2859 2965 8.624019 TCCTATCCTCTAGAATTCCTTTGAAA 57.376 34.615 0.65 0.00 33.32 2.69
2860 2966 9.230477 TCCTATCCTCTAGAATTCCTTTGAAAT 57.770 33.333 0.65 0.00 33.32 2.17
2861 2967 9.859152 CCTATCCTCTAGAATTCCTTTGAAATT 57.141 33.333 0.65 0.00 33.32 1.82
2863 2969 8.759481 ATCCTCTAGAATTCCTTTGAAATTCC 57.241 34.615 0.65 0.00 33.32 3.01
2864 2970 7.933223 TCCTCTAGAATTCCTTTGAAATTCCT 58.067 34.615 0.65 0.00 33.32 3.36
2865 2971 8.049721 TCCTCTAGAATTCCTTTGAAATTCCTC 58.950 37.037 0.65 0.00 33.32 3.71
2866 2972 8.052141 CCTCTAGAATTCCTTTGAAATTCCTCT 58.948 37.037 0.65 0.00 33.32 3.69
2871 2977 8.807118 AGAATTCCTTTGAAATTCCTCTAAACC 58.193 33.333 0.65 0.00 33.32 3.27
2872 2978 8.491045 AATTCCTTTGAAATTCCTCTAAACCA 57.509 30.769 0.00 0.00 33.32 3.67
2873 2979 7.906199 TTCCTTTGAAATTCCTCTAAACCAA 57.094 32.000 0.00 0.00 0.00 3.67
2874 2980 7.906199 TCCTTTGAAATTCCTCTAAACCAAA 57.094 32.000 0.00 0.00 0.00 3.28
2875 2981 7.951591 TCCTTTGAAATTCCTCTAAACCAAAG 58.048 34.615 0.00 0.00 39.03 2.77
2876 2982 7.154656 CCTTTGAAATTCCTCTAAACCAAAGG 58.845 38.462 13.80 13.80 46.93 3.11
2877 2983 7.906199 TTTGAAATTCCTCTAAACCAAAGGA 57.094 32.000 0.00 0.00 37.42 3.36
2878 2984 7.524717 TTGAAATTCCTCTAAACCAAAGGAG 57.475 36.000 0.00 0.00 40.21 3.69
2879 2985 6.010219 TGAAATTCCTCTAAACCAAAGGAGG 58.990 40.000 0.00 0.00 44.69 4.30
2880 2986 3.434940 TTCCTCTAAACCAAAGGAGGC 57.565 47.619 0.00 0.00 43.46 4.70
2881 2987 1.633945 TCCTCTAAACCAAAGGAGGCC 59.366 52.381 0.00 0.00 43.46 5.19
2882 2988 1.636003 CCTCTAAACCAAAGGAGGCCT 59.364 52.381 3.86 3.86 38.82 5.19
2883 2989 2.356227 CCTCTAAACCAAAGGAGGCCTC 60.356 54.545 25.59 25.59 38.82 4.70
2884 2990 1.278127 TCTAAACCAAAGGAGGCCTCG 59.722 52.381 26.36 14.50 30.89 4.63
2885 2991 0.326927 TAAACCAAAGGAGGCCTCGG 59.673 55.000 26.36 22.66 30.89 4.63
2886 2992 1.423794 AAACCAAAGGAGGCCTCGGA 61.424 55.000 25.99 0.00 30.89 4.55
2887 2993 1.842381 AACCAAAGGAGGCCTCGGAG 61.842 60.000 25.99 16.22 30.89 4.63
2888 2994 2.294078 CCAAAGGAGGCCTCGGAGT 61.294 63.158 26.36 8.80 30.89 3.85
2889 2995 1.679898 CAAAGGAGGCCTCGGAGTT 59.320 57.895 26.36 13.77 30.89 3.01
2890 2996 0.036875 CAAAGGAGGCCTCGGAGTTT 59.963 55.000 26.36 18.46 30.89 2.66
2891 2997 0.036875 AAAGGAGGCCTCGGAGTTTG 59.963 55.000 26.36 0.00 30.89 2.93
2892 2998 1.128188 AAGGAGGCCTCGGAGTTTGT 61.128 55.000 26.36 2.20 30.89 2.83
2893 2999 1.079057 GGAGGCCTCGGAGTTTGTC 60.079 63.158 26.36 5.37 0.00 3.18
2894 3000 1.671742 GAGGCCTCGGAGTTTGTCA 59.328 57.895 19.06 0.00 0.00 3.58
2895 3001 0.390472 GAGGCCTCGGAGTTTGTCAG 60.390 60.000 19.06 0.00 0.00 3.51
2896 3002 0.832135 AGGCCTCGGAGTTTGTCAGA 60.832 55.000 0.00 0.00 0.00 3.27
2897 3003 0.250513 GGCCTCGGAGTTTGTCAGAT 59.749 55.000 4.02 0.00 0.00 2.90
2898 3004 1.646189 GCCTCGGAGTTTGTCAGATC 58.354 55.000 4.02 0.00 0.00 2.75
2899 3005 1.740718 GCCTCGGAGTTTGTCAGATCC 60.741 57.143 4.02 0.00 0.00 3.36
2900 3006 1.550524 CCTCGGAGTTTGTCAGATCCA 59.449 52.381 4.02 0.00 0.00 3.41
2901 3007 2.417924 CCTCGGAGTTTGTCAGATCCAG 60.418 54.545 4.02 0.00 0.00 3.86
2902 3008 1.066858 TCGGAGTTTGTCAGATCCAGC 60.067 52.381 0.00 0.00 0.00 4.85
2903 3009 1.066573 CGGAGTTTGTCAGATCCAGCT 60.067 52.381 0.00 0.00 0.00 4.24
2904 3010 2.613977 CGGAGTTTGTCAGATCCAGCTT 60.614 50.000 0.00 0.00 0.00 3.74
2905 3011 2.746362 GGAGTTTGTCAGATCCAGCTTG 59.254 50.000 0.00 0.00 0.00 4.01
2906 3012 3.406764 GAGTTTGTCAGATCCAGCTTGT 58.593 45.455 0.00 0.00 0.00 3.16
2907 3013 3.817647 GAGTTTGTCAGATCCAGCTTGTT 59.182 43.478 0.00 0.00 0.00 2.83
2908 3014 3.567164 AGTTTGTCAGATCCAGCTTGTTG 59.433 43.478 0.00 0.00 0.00 3.33
2909 3015 3.490439 TTGTCAGATCCAGCTTGTTGA 57.510 42.857 0.00 0.00 0.00 3.18
2910 3016 3.708403 TGTCAGATCCAGCTTGTTGAT 57.292 42.857 0.00 0.00 0.00 2.57
2911 3017 3.603532 TGTCAGATCCAGCTTGTTGATC 58.396 45.455 0.00 0.00 36.08 2.92
2912 3018 2.941720 GTCAGATCCAGCTTGTTGATCC 59.058 50.000 8.09 0.00 36.41 3.36
2913 3019 2.573009 TCAGATCCAGCTTGTTGATCCA 59.427 45.455 8.09 0.00 36.41 3.41
2914 3020 3.201487 TCAGATCCAGCTTGTTGATCCAT 59.799 43.478 8.09 0.00 36.41 3.41
2915 3021 3.315470 CAGATCCAGCTTGTTGATCCATG 59.685 47.826 8.09 0.00 36.41 3.66
2916 3022 2.133281 TCCAGCTTGTTGATCCATGG 57.867 50.000 4.97 4.97 0.00 3.66
2917 3023 1.634973 TCCAGCTTGTTGATCCATGGA 59.365 47.619 18.88 18.88 33.11 3.41
2918 3024 2.022195 CCAGCTTGTTGATCCATGGAG 58.978 52.381 21.33 5.54 0.00 3.86
2919 3025 2.022195 CAGCTTGTTGATCCATGGAGG 58.978 52.381 21.33 5.22 39.47 4.30
2932 3038 5.732331 TCCATGGAGGAATTTTGTAGGAT 57.268 39.130 11.44 0.00 45.65 3.24
2933 3039 6.091076 TCCATGGAGGAATTTTGTAGGATT 57.909 37.500 11.44 0.00 45.65 3.01
2934 3040 6.502138 TCCATGGAGGAATTTTGTAGGATTT 58.498 36.000 11.44 0.00 45.65 2.17
2935 3041 6.959366 TCCATGGAGGAATTTTGTAGGATTTT 59.041 34.615 11.44 0.00 45.65 1.82
2936 3042 7.124147 TCCATGGAGGAATTTTGTAGGATTTTC 59.876 37.037 11.44 0.00 45.65 2.29
2937 3043 7.093377 CCATGGAGGAATTTTGTAGGATTTTCA 60.093 37.037 5.56 0.00 41.22 2.69
2938 3044 8.480501 CATGGAGGAATTTTGTAGGATTTTCAT 58.519 33.333 0.00 0.00 0.00 2.57
2939 3045 9.713684 ATGGAGGAATTTTGTAGGATTTTCATA 57.286 29.630 0.00 0.00 0.00 2.15
2940 3046 9.189156 TGGAGGAATTTTGTAGGATTTTCATAG 57.811 33.333 0.00 0.00 0.00 2.23
2941 3047 8.633561 GGAGGAATTTTGTAGGATTTTCATAGG 58.366 37.037 0.00 0.00 0.00 2.57
2942 3048 9.408648 GAGGAATTTTGTAGGATTTTCATAGGA 57.591 33.333 0.00 0.00 0.00 2.94
2943 3049 9.942526 AGGAATTTTGTAGGATTTTCATAGGAT 57.057 29.630 0.00 0.00 0.00 3.24
2978 3084 5.973899 GGAAAAATTCCTTCAGAGCTCTT 57.026 39.130 15.27 0.00 46.57 2.85
2979 3085 6.338214 GGAAAAATTCCTTCAGAGCTCTTT 57.662 37.500 15.27 1.02 46.57 2.52
2980 3086 6.155136 GGAAAAATTCCTTCAGAGCTCTTTG 58.845 40.000 15.27 4.87 46.57 2.77
2981 3087 5.718724 AAAATTCCTTCAGAGCTCTTTGG 57.281 39.130 15.27 15.93 0.00 3.28
2982 3088 4.379302 AATTCCTTCAGAGCTCTTTGGT 57.621 40.909 15.27 0.00 0.00 3.67
2983 3089 3.864789 TTCCTTCAGAGCTCTTTGGTT 57.135 42.857 15.27 0.00 0.00 3.67
2984 3090 3.864789 TCCTTCAGAGCTCTTTGGTTT 57.135 42.857 15.27 0.00 0.00 3.27
2985 3091 3.480470 TCCTTCAGAGCTCTTTGGTTTG 58.520 45.455 15.27 1.50 0.00 2.93
2986 3092 3.117888 TCCTTCAGAGCTCTTTGGTTTGT 60.118 43.478 15.27 0.00 31.30 2.83
2987 3093 4.102524 TCCTTCAGAGCTCTTTGGTTTGTA 59.897 41.667 15.27 0.00 31.30 2.41
2988 3094 4.453819 CCTTCAGAGCTCTTTGGTTTGTAG 59.546 45.833 15.27 5.08 31.30 2.74
2989 3095 4.008074 TCAGAGCTCTTTGGTTTGTAGG 57.992 45.455 15.27 0.00 31.30 3.18
2990 3096 3.646162 TCAGAGCTCTTTGGTTTGTAGGA 59.354 43.478 15.27 0.20 31.30 2.94
2991 3097 4.102524 TCAGAGCTCTTTGGTTTGTAGGAA 59.897 41.667 15.27 0.00 31.30 3.36
2992 3098 5.006386 CAGAGCTCTTTGGTTTGTAGGAAT 58.994 41.667 15.27 0.00 0.00 3.01
2993 3099 5.006386 AGAGCTCTTTGGTTTGTAGGAATG 58.994 41.667 11.45 0.00 0.00 2.67
2994 3100 4.985538 AGCTCTTTGGTTTGTAGGAATGA 58.014 39.130 0.00 0.00 0.00 2.57
2995 3101 5.385198 AGCTCTTTGGTTTGTAGGAATGAA 58.615 37.500 0.00 0.00 0.00 2.57
2996 3102 5.833131 AGCTCTTTGGTTTGTAGGAATGAAA 59.167 36.000 0.00 0.00 0.00 2.69
2997 3103 6.494835 AGCTCTTTGGTTTGTAGGAATGAAAT 59.505 34.615 0.00 0.00 0.00 2.17
2998 3104 6.808704 GCTCTTTGGTTTGTAGGAATGAAATC 59.191 38.462 0.00 0.00 0.00 2.17
2999 3105 7.227049 TCTTTGGTTTGTAGGAATGAAATCC 57.773 36.000 0.00 0.00 39.96 3.01
3013 3119 7.115414 GGAATGAAATCCTATTCCTATGGAGG 58.885 42.308 8.37 0.00 45.66 4.30
3014 3120 7.037297 GGAATGAAATCCTATTCCTATGGAGGA 60.037 40.741 8.37 0.00 45.66 3.71
3031 3137 6.891306 TGGAGGAATTCTTTCTATCCTTCA 57.109 37.500 5.23 0.00 43.73 3.02
3032 3138 6.653989 TGGAGGAATTCTTTCTATCCTTCAC 58.346 40.000 5.23 0.00 41.61 3.18
3033 3139 6.215431 TGGAGGAATTCTTTCTATCCTTCACA 59.785 38.462 5.23 0.00 41.61 3.58
3034 3140 7.092264 TGGAGGAATTCTTTCTATCCTTCACAT 60.092 37.037 5.23 0.00 41.61 3.21
3035 3141 7.777440 GGAGGAATTCTTTCTATCCTTCACATT 59.223 37.037 5.23 0.00 42.28 2.71
3036 3142 9.183368 GAGGAATTCTTTCTATCCTTCACATTT 57.817 33.333 5.23 0.00 42.28 2.32
3037 3143 9.183368 AGGAATTCTTTCTATCCTTCACATTTC 57.817 33.333 5.23 0.00 39.23 2.17
3038 3144 8.960591 GGAATTCTTTCTATCCTTCACATTTCA 58.039 33.333 5.23 0.00 32.16 2.69
3042 3148 9.618890 TTCTTTCTATCCTTCACATTTCATAGG 57.381 33.333 0.00 0.00 0.00 2.57
3043 3149 8.992349 TCTTTCTATCCTTCACATTTCATAGGA 58.008 33.333 0.00 0.00 39.21 2.94
3044 3150 9.618890 CTTTCTATCCTTCACATTTCATAGGAA 57.381 33.333 0.00 0.00 38.42 3.36
3045 3151 9.973661 TTTCTATCCTTCACATTTCATAGGAAA 57.026 29.630 4.85 4.85 46.36 3.13
3046 3152 9.973661 TTCTATCCTTCACATTTCATAGGAAAA 57.026 29.630 6.65 0.00 45.52 2.29
3065 3171 8.966069 AGGAAAATAAACATTAGCCTAGACTC 57.034 34.615 0.00 0.00 0.00 3.36
3066 3172 8.548877 AGGAAAATAAACATTAGCCTAGACTCA 58.451 33.333 0.00 0.00 0.00 3.41
3067 3173 9.174166 GGAAAATAAACATTAGCCTAGACTCAA 57.826 33.333 0.00 0.00 0.00 3.02
3070 3176 8.682936 AATAAACATTAGCCTAGACTCAATGG 57.317 34.615 0.00 0.00 32.20 3.16
3071 3177 5.957771 AACATTAGCCTAGACTCAATGGA 57.042 39.130 0.00 0.00 32.20 3.41
3072 3178 5.957771 ACATTAGCCTAGACTCAATGGAA 57.042 39.130 0.00 0.00 32.20 3.53
3073 3179 6.313519 ACATTAGCCTAGACTCAATGGAAA 57.686 37.500 0.00 0.00 32.20 3.13
3074 3180 6.721318 ACATTAGCCTAGACTCAATGGAAAA 58.279 36.000 0.00 0.00 32.20 2.29
3075 3181 7.175104 ACATTAGCCTAGACTCAATGGAAAAA 58.825 34.615 0.00 0.00 32.20 1.94
3097 3203 6.780457 AAATCCTATGGTGTGAATCAAAGG 57.220 37.500 0.00 0.00 0.00 3.11
3098 3204 4.235079 TCCTATGGTGTGAATCAAAGGG 57.765 45.455 0.00 0.00 0.00 3.95
3099 3205 2.689983 CCTATGGTGTGAATCAAAGGGC 59.310 50.000 0.00 0.00 0.00 5.19
3100 3206 2.307496 ATGGTGTGAATCAAAGGGCA 57.693 45.000 0.00 0.00 0.00 5.36
3101 3207 2.307496 TGGTGTGAATCAAAGGGCAT 57.693 45.000 0.00 0.00 0.00 4.40
3102 3208 2.170166 TGGTGTGAATCAAAGGGCATC 58.830 47.619 0.00 0.00 0.00 3.91
3103 3209 2.225091 TGGTGTGAATCAAAGGGCATCT 60.225 45.455 0.00 0.00 0.00 2.90
3104 3210 2.424956 GGTGTGAATCAAAGGGCATCTC 59.575 50.000 0.00 0.00 0.00 2.75
3105 3211 2.424956 GTGTGAATCAAAGGGCATCTCC 59.575 50.000 0.00 0.00 0.00 3.71
3106 3212 2.309755 TGTGAATCAAAGGGCATCTCCT 59.690 45.455 0.00 0.00 39.17 3.69
3116 3222 4.445557 AGGGCATCTCCTTTTCTATTCC 57.554 45.455 0.00 0.00 32.13 3.01
3117 3223 4.050757 AGGGCATCTCCTTTTCTATTCCT 58.949 43.478 0.00 0.00 32.13 3.36
3118 3224 5.227593 AGGGCATCTCCTTTTCTATTCCTA 58.772 41.667 0.00 0.00 32.13 2.94
3119 3225 5.854481 AGGGCATCTCCTTTTCTATTCCTAT 59.146 40.000 0.00 0.00 32.13 2.57
3120 3226 5.942826 GGGCATCTCCTTTTCTATTCCTATG 59.057 44.000 0.00 0.00 34.39 2.23
3121 3227 5.414144 GGCATCTCCTTTTCTATTCCTATGC 59.586 44.000 0.00 0.00 36.22 3.14
3122 3228 6.000219 GCATCTCCTTTTCTATTCCTATGCA 59.000 40.000 0.00 0.00 36.79 3.96
3123 3229 6.658391 GCATCTCCTTTTCTATTCCTATGCAT 59.342 38.462 3.79 3.79 36.79 3.96
3124 3230 7.826252 GCATCTCCTTTTCTATTCCTATGCATA 59.174 37.037 6.20 6.20 36.79 3.14
3125 3231 9.381033 CATCTCCTTTTCTATTCCTATGCATAG 57.619 37.037 24.33 24.33 0.00 2.23
3126 3232 8.727100 TCTCCTTTTCTATTCCTATGCATAGA 57.273 34.615 31.14 15.42 31.38 1.98
3127 3233 9.159254 TCTCCTTTTCTATTCCTATGCATAGAA 57.841 33.333 31.14 22.58 39.29 2.10
3128 3234 9.956640 CTCCTTTTCTATTCCTATGCATAGAAT 57.043 33.333 31.14 26.28 40.23 2.40
3137 3243 7.444629 TTCCTATGCATAGAATTTGAGATGC 57.555 36.000 31.14 0.00 44.00 3.91
3143 3249 6.068473 GCATAGAATTTGAGATGCATGTCA 57.932 37.500 21.70 21.70 43.36 3.58
3144 3250 6.678878 GCATAGAATTTGAGATGCATGTCAT 58.321 36.000 25.41 12.35 43.36 3.06
3158 3264 8.095937 GATGCATGTCATCTCATTTTCTATGA 57.904 34.615 2.46 0.00 46.29 2.15
3159 3265 7.255491 TGCATGTCATCTCATTTTCTATGAC 57.745 36.000 7.23 7.23 45.40 3.06
3160 3266 7.052248 TGCATGTCATCTCATTTTCTATGACT 58.948 34.615 13.59 0.19 45.40 3.41
3161 3267 7.555195 TGCATGTCATCTCATTTTCTATGACTT 59.445 33.333 13.59 6.42 45.40 3.01
3162 3268 8.404000 GCATGTCATCTCATTTTCTATGACTTT 58.596 33.333 13.59 1.75 45.40 2.66
3163 3269 9.932699 CATGTCATCTCATTTTCTATGACTTTC 57.067 33.333 13.59 0.00 45.40 2.62
3164 3270 8.498054 TGTCATCTCATTTTCTATGACTTTCC 57.502 34.615 13.59 0.00 45.40 3.13
3165 3271 8.324306 TGTCATCTCATTTTCTATGACTTTCCT 58.676 33.333 13.59 0.00 45.40 3.36
3166 3272 9.823647 GTCATCTCATTTTCTATGACTTTCCTA 57.176 33.333 0.00 0.00 43.07 2.94
3170 3276 9.838339 TCTCATTTTCTATGACTTTCCTATTCC 57.162 33.333 0.00 0.00 0.00 3.01
3171 3277 9.844257 CTCATTTTCTATGACTTTCCTATTCCT 57.156 33.333 0.00 0.00 0.00 3.36
3181 3287 9.927081 ATGACTTTCCTATTCCTATGATTTGTT 57.073 29.630 0.00 0.00 0.00 2.83
3194 3300 9.793259 TCCTATGATTTGTTAATCCTATGAACC 57.207 33.333 0.00 0.00 39.56 3.62
3195 3301 9.573166 CCTATGATTTGTTAATCCTATGAACCA 57.427 33.333 0.00 0.00 39.56 3.67
3199 3305 9.527157 TGATTTGTTAATCCTATGAACCAAAGA 57.473 29.630 0.00 0.00 39.56 2.52
3202 3308 7.938140 TGTTAATCCTATGAACCAAAGAAGG 57.062 36.000 0.00 0.00 0.00 3.46
3203 3309 6.377146 TGTTAATCCTATGAACCAAAGAAGGC 59.623 38.462 0.00 0.00 0.00 4.35
3204 3310 3.366052 TCCTATGAACCAAAGAAGGCC 57.634 47.619 0.00 0.00 0.00 5.19
3205 3311 2.919602 TCCTATGAACCAAAGAAGGCCT 59.080 45.455 0.00 0.00 0.00 5.19
3206 3312 4.108570 TCCTATGAACCAAAGAAGGCCTA 58.891 43.478 5.16 0.00 0.00 3.93
3207 3313 4.164221 TCCTATGAACCAAAGAAGGCCTAG 59.836 45.833 5.16 0.00 0.00 3.02
3208 3314 2.200373 TGAACCAAAGAAGGCCTAGC 57.800 50.000 5.16 0.34 0.00 3.42
3218 3324 3.926003 GGCCTAGCCTTTTGCCTC 58.074 61.111 0.00 0.00 46.69 4.70
3219 3325 2.115291 GGCCTAGCCTTTTGCCTCG 61.115 63.158 0.00 0.00 46.69 4.63
3220 3326 1.377333 GCCTAGCCTTTTGCCTCGT 60.377 57.895 0.00 0.00 42.71 4.18
3221 3327 0.960861 GCCTAGCCTTTTGCCTCGTT 60.961 55.000 0.00 0.00 42.71 3.85
3222 3328 1.087501 CCTAGCCTTTTGCCTCGTTC 58.912 55.000 0.00 0.00 42.71 3.95
3223 3329 1.339151 CCTAGCCTTTTGCCTCGTTCT 60.339 52.381 0.00 0.00 42.71 3.01
3224 3330 2.427506 CTAGCCTTTTGCCTCGTTCTT 58.572 47.619 0.00 0.00 42.71 2.52
3225 3331 1.692411 AGCCTTTTGCCTCGTTCTTT 58.308 45.000 0.00 0.00 42.71 2.52
3226 3332 1.338020 AGCCTTTTGCCTCGTTCTTTG 59.662 47.619 0.00 0.00 42.71 2.77
3227 3333 1.067060 GCCTTTTGCCTCGTTCTTTGT 59.933 47.619 0.00 0.00 0.00 2.83
3228 3334 2.731217 CCTTTTGCCTCGTTCTTTGTG 58.269 47.619 0.00 0.00 0.00 3.33
3229 3335 2.119457 CTTTTGCCTCGTTCTTTGTGC 58.881 47.619 0.00 0.00 0.00 4.57
3230 3336 1.098869 TTTGCCTCGTTCTTTGTGCA 58.901 45.000 0.00 0.00 0.00 4.57
3231 3337 1.317613 TTGCCTCGTTCTTTGTGCAT 58.682 45.000 0.00 0.00 0.00 3.96
3232 3338 2.177394 TGCCTCGTTCTTTGTGCATA 57.823 45.000 0.00 0.00 0.00 3.14
3233 3339 2.076100 TGCCTCGTTCTTTGTGCATAG 58.924 47.619 0.00 0.00 0.00 2.23
3234 3340 1.398390 GCCTCGTTCTTTGTGCATAGG 59.602 52.381 0.00 0.00 0.00 2.57
3235 3341 2.935238 GCCTCGTTCTTTGTGCATAGGA 60.935 50.000 0.00 0.00 0.00 2.94
3236 3342 3.334691 CCTCGTTCTTTGTGCATAGGAA 58.665 45.455 0.00 0.00 0.00 3.36
3237 3343 3.941483 CCTCGTTCTTTGTGCATAGGAAT 59.059 43.478 0.00 0.00 0.00 3.01
3238 3344 4.201851 CCTCGTTCTTTGTGCATAGGAATG 60.202 45.833 11.42 11.42 36.09 2.67
3239 3345 4.323417 TCGTTCTTTGTGCATAGGAATGT 58.677 39.130 14.83 0.00 35.38 2.71
3240 3346 5.483811 TCGTTCTTTGTGCATAGGAATGTA 58.516 37.500 14.83 5.32 35.38 2.29
3241 3347 5.935206 TCGTTCTTTGTGCATAGGAATGTAA 59.065 36.000 14.83 1.74 35.38 2.41
3242 3348 6.428465 TCGTTCTTTGTGCATAGGAATGTAAA 59.572 34.615 14.83 0.00 35.38 2.01
3243 3349 7.041030 TCGTTCTTTGTGCATAGGAATGTAAAA 60.041 33.333 14.83 0.00 35.38 1.52
3244 3350 7.271223 CGTTCTTTGTGCATAGGAATGTAAAAG 59.729 37.037 0.00 0.00 35.38 2.27
3245 3351 7.994425 TCTTTGTGCATAGGAATGTAAAAGA 57.006 32.000 0.00 0.00 35.36 2.52
3246 3352 8.044060 TCTTTGTGCATAGGAATGTAAAAGAG 57.956 34.615 0.00 0.00 34.31 2.85
3247 3353 7.882791 TCTTTGTGCATAGGAATGTAAAAGAGA 59.117 33.333 0.00 0.00 34.31 3.10
3248 3354 7.994425 TTGTGCATAGGAATGTAAAAGAGAA 57.006 32.000 0.00 0.00 35.38 2.87
3249 3355 7.994425 TGTGCATAGGAATGTAAAAGAGAAA 57.006 32.000 0.00 0.00 35.38 2.52
3250 3356 8.579850 TGTGCATAGGAATGTAAAAGAGAAAT 57.420 30.769 0.00 0.00 35.38 2.17
3251 3357 9.023962 TGTGCATAGGAATGTAAAAGAGAAATT 57.976 29.630 0.00 0.00 35.38 1.82
3252 3358 9.860898 GTGCATAGGAATGTAAAAGAGAAATTT 57.139 29.630 0.00 0.00 35.38 1.82
3258 3364 8.579863 AGGAATGTAAAAGAGAAATTTCACAGG 58.420 33.333 19.99 0.00 0.00 4.00
3259 3365 8.576442 GGAATGTAAAAGAGAAATTTCACAGGA 58.424 33.333 19.99 0.00 0.00 3.86
3262 3368 9.918630 ATGTAAAAGAGAAATTTCACAGGATTG 57.081 29.630 19.99 0.00 0.00 2.67
3263 3369 8.912988 TGTAAAAGAGAAATTTCACAGGATTGT 58.087 29.630 19.99 2.77 38.31 2.71
3271 3377 9.710900 AGAAATTTCACAGGATTGTAAAATTCC 57.289 29.630 19.99 0.00 41.92 3.01
3272 3378 9.710900 GAAATTTCACAGGATTGTAAAATTCCT 57.289 29.630 13.40 0.00 41.92 3.36
3274 3380 9.710900 AATTTCACAGGATTGTAAAATTCCTTC 57.289 29.630 0.00 0.00 39.76 3.46
3275 3381 6.494893 TCACAGGATTGTAAAATTCCTTCG 57.505 37.500 0.00 0.00 36.67 3.79
3276 3382 5.414454 TCACAGGATTGTAAAATTCCTTCGG 59.586 40.000 0.00 0.00 36.67 4.30
3277 3383 5.183140 CACAGGATTGTAAAATTCCTTCGGT 59.817 40.000 0.00 0.00 36.67 4.69
3278 3384 5.773176 ACAGGATTGTAAAATTCCTTCGGTT 59.227 36.000 0.00 0.00 36.67 4.44
3279 3385 6.266786 ACAGGATTGTAAAATTCCTTCGGTTT 59.733 34.615 0.00 0.00 36.67 3.27
3280 3386 7.151976 CAGGATTGTAAAATTCCTTCGGTTTT 58.848 34.615 0.00 0.00 36.67 2.43
3281 3387 7.328493 CAGGATTGTAAAATTCCTTCGGTTTTC 59.672 37.037 0.00 0.00 36.67 2.29
3282 3388 6.588756 GGATTGTAAAATTCCTTCGGTTTTCC 59.411 38.462 0.00 0.00 0.00 3.13
3283 3389 6.718522 TTGTAAAATTCCTTCGGTTTTCCT 57.281 33.333 0.00 0.00 37.95 3.36
3284 3390 6.079424 TGTAAAATTCCTTCGGTTTTCCTG 57.921 37.500 0.00 0.00 37.95 3.86
3285 3391 5.595133 TGTAAAATTCCTTCGGTTTTCCTGT 59.405 36.000 0.00 0.00 37.95 4.00
3286 3392 6.771749 TGTAAAATTCCTTCGGTTTTCCTGTA 59.228 34.615 0.00 0.00 37.95 2.74
3287 3393 6.718522 AAAATTCCTTCGGTTTTCCTGTAA 57.281 33.333 0.00 0.00 37.95 2.41
3288 3394 6.718522 AAATTCCTTCGGTTTTCCTGTAAA 57.281 33.333 0.00 0.00 37.95 2.01
3289 3395 6.718522 AATTCCTTCGGTTTTCCTGTAAAA 57.281 33.333 0.00 0.00 37.95 1.52
3300 3406 6.607004 TTTTCCTGTAAAACTCAACCCAAA 57.393 33.333 0.00 0.00 32.05 3.28
3301 3407 5.845391 TTCCTGTAAAACTCAACCCAAAG 57.155 39.130 0.00 0.00 0.00 2.77
3302 3408 5.118729 TCCTGTAAAACTCAACCCAAAGA 57.881 39.130 0.00 0.00 0.00 2.52
3303 3409 5.511363 TCCTGTAAAACTCAACCCAAAGAA 58.489 37.500 0.00 0.00 0.00 2.52
3304 3410 5.952947 TCCTGTAAAACTCAACCCAAAGAAA 59.047 36.000 0.00 0.00 0.00 2.52
3305 3411 6.437793 TCCTGTAAAACTCAACCCAAAGAAAA 59.562 34.615 0.00 0.00 0.00 2.29
3306 3412 7.038941 TCCTGTAAAACTCAACCCAAAGAAAAA 60.039 33.333 0.00 0.00 0.00 1.94
3307 3413 7.768582 CCTGTAAAACTCAACCCAAAGAAAAAT 59.231 33.333 0.00 0.00 0.00 1.82
3308 3414 9.161629 CTGTAAAACTCAACCCAAAGAAAAATT 57.838 29.630 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.058914 CAGTTTGGAGCCTCGTTTAACTG 60.059 47.826 10.40 10.40 36.28 3.16
43 44 1.065551 GTGGTGTGTTCAGTTTGGAGC 59.934 52.381 0.00 0.00 0.00 4.70
84 90 3.738246 CCTGCTGCTGCTGCTGTG 61.738 66.667 27.67 18.05 39.81 3.66
225 264 2.032071 AAAGCGTCGGAAGTGGGG 59.968 61.111 0.00 0.00 0.00 4.96
229 268 1.292541 GGGAGAAAGCGTCGGAAGT 59.707 57.895 0.00 0.00 0.00 3.01
250 290 1.190643 AGCGAGAGGGAGGAGAAAAG 58.809 55.000 0.00 0.00 0.00 2.27
317 367 4.644234 AGATCGCCCAGAGATATGATACTG 59.356 45.833 0.00 0.00 0.00 2.74
325 375 1.621992 GACCAGATCGCCCAGAGATA 58.378 55.000 0.00 0.00 0.00 1.98
349 399 1.423794 ATTCACCACCAACCTCCGGT 61.424 55.000 0.00 0.00 37.65 5.28
386 436 0.250513 ATCCCAACTTGCGAGACCTC 59.749 55.000 8.31 0.00 0.00 3.85
443 493 1.041447 CCCAGGTAGGTCGGTTCGAT 61.041 60.000 0.00 0.00 38.42 3.59
458 508 4.489771 CCGGGTAAGCAGGCCCAG 62.490 72.222 0.00 0.00 45.07 4.45
488 538 6.089417 GCAAGAATTAACTACACATTGGCAAC 59.911 38.462 0.00 0.00 0.00 4.17
506 556 6.431234 CCCAAGAACTAACTGTAAGCAAGAAT 59.569 38.462 0.00 0.00 37.60 2.40
512 562 5.246307 ACATCCCAAGAACTAACTGTAAGC 58.754 41.667 0.00 0.00 37.60 3.09
513 563 8.842358 TTTACATCCCAAGAACTAACTGTAAG 57.158 34.615 0.00 0.00 42.29 2.34
514 564 7.881232 CCTTTACATCCCAAGAACTAACTGTAA 59.119 37.037 0.00 0.00 0.00 2.41
515 565 7.016858 ACCTTTACATCCCAAGAACTAACTGTA 59.983 37.037 0.00 0.00 0.00 2.74
516 566 6.183361 ACCTTTACATCCCAAGAACTAACTGT 60.183 38.462 0.00 0.00 0.00 3.55
517 567 6.238648 ACCTTTACATCCCAAGAACTAACTG 58.761 40.000 0.00 0.00 0.00 3.16
518 568 6.449830 ACCTTTACATCCCAAGAACTAACT 57.550 37.500 0.00 0.00 0.00 2.24
519 569 6.489022 ACAACCTTTACATCCCAAGAACTAAC 59.511 38.462 0.00 0.00 0.00 2.34
520 570 6.488683 CACAACCTTTACATCCCAAGAACTAA 59.511 38.462 0.00 0.00 0.00 2.24
521 571 6.001460 CACAACCTTTACATCCCAAGAACTA 58.999 40.000 0.00 0.00 0.00 2.24
522 572 4.827284 CACAACCTTTACATCCCAAGAACT 59.173 41.667 0.00 0.00 0.00 3.01
523 573 4.825085 TCACAACCTTTACATCCCAAGAAC 59.175 41.667 0.00 0.00 0.00 3.01
550 617 1.039068 TGCAGGACATGTGGTTTTGG 58.961 50.000 1.15 0.00 0.00 3.28
748 825 5.559770 TCTCATGAGCAATTTAACACAGGA 58.440 37.500 18.36 0.00 0.00 3.86
775 852 9.388506 GCACTTCATATATCCATAGCAGTTTAT 57.611 33.333 0.00 0.00 0.00 1.40
851 929 6.441924 AGGGATTCTAAGATCTGAAACAGACA 59.558 38.462 0.00 0.00 43.63 3.41
870 948 5.163259 TCTTCCTTCCATCTCTAGGGATT 57.837 43.478 1.06 0.00 35.00 3.01
927 1007 1.002868 CCACTTGCTGACCTCCCAG 60.003 63.158 0.00 0.00 37.23 4.45
962 1042 6.174720 AGATGAACCTCAAAGTGTTGTAGA 57.825 37.500 0.00 0.00 36.07 2.59
1115 1200 2.658325 GCTTGATTCACGTTGATTGCAC 59.342 45.455 0.00 0.00 0.00 4.57
1173 1260 4.201851 CCAGGAATTTGCGACAGAACATAG 60.202 45.833 0.00 0.00 0.00 2.23
1528 1618 4.460263 TCAACCATATTACAGACCATGCC 58.540 43.478 0.00 0.00 0.00 4.40
1612 1702 1.209504 TGTGCCTTAATCTTCTCCCGG 59.790 52.381 0.00 0.00 0.00 5.73
1997 2087 4.092279 ACAGATGAAGAGATCACAGTCCA 58.908 43.478 0.00 0.00 41.93 4.02
2010 2100 6.094603 CAGAAAACCAAGGGATACAGATGAAG 59.905 42.308 0.00 0.00 39.74 3.02
2200 2290 2.249844 TCCAGGTTTCGGAGTTTGTC 57.750 50.000 0.00 0.00 0.00 3.18
2225 2315 5.045286 AGAGGTATGCTGGAACAAAGAAGAT 60.045 40.000 0.00 0.00 38.70 2.40
2289 2379 8.140628 TCATCCTCTATTCGAAAATCTTCTCAG 58.859 37.037 0.00 0.00 0.00 3.35
2354 2449 6.155565 TGTGAGATTCCCGTTTTTCTATCCTA 59.844 38.462 0.00 0.00 0.00 2.94
2474 2573 7.545615 GGATCATTCCAGAAAACACAATTTACC 59.454 37.037 0.00 0.00 42.12 2.85
2547 2653 9.860650 ACATTAGCCTAACATAACATAATGGAA 57.139 29.630 0.00 0.00 34.82 3.53
2548 2654 9.860650 AACATTAGCCTAACATAACATAATGGA 57.139 29.630 0.00 0.00 34.82 3.41
2553 2659 9.280174 GCCTAAACATTAGCCTAACATAACATA 57.720 33.333 0.00 0.00 0.00 2.29
2554 2660 7.230712 GGCCTAAACATTAGCCTAACATAACAT 59.769 37.037 0.00 0.00 42.34 2.71
2555 2661 6.544564 GGCCTAAACATTAGCCTAACATAACA 59.455 38.462 0.00 0.00 42.34 2.41
2556 2662 6.967135 GGCCTAAACATTAGCCTAACATAAC 58.033 40.000 0.00 0.00 42.34 1.89
2565 2671 4.142160 CCAAAAGAGGCCTAAACATTAGCC 60.142 45.833 4.42 0.00 46.13 3.93
2566 2672 4.462834 ACCAAAAGAGGCCTAAACATTAGC 59.537 41.667 4.42 0.00 0.00 3.09
2567 2673 6.208599 TGAACCAAAAGAGGCCTAAACATTAG 59.791 38.462 4.42 0.00 0.00 1.73
2568 2674 6.071984 TGAACCAAAAGAGGCCTAAACATTA 58.928 36.000 4.42 0.00 0.00 1.90
2569 2675 4.898861 TGAACCAAAAGAGGCCTAAACATT 59.101 37.500 4.42 0.00 0.00 2.71
2570 2676 4.479158 TGAACCAAAAGAGGCCTAAACAT 58.521 39.130 4.42 0.00 0.00 2.71
2571 2677 3.904717 TGAACCAAAAGAGGCCTAAACA 58.095 40.909 4.42 0.00 0.00 2.83
2572 2678 5.125578 CCTATGAACCAAAAGAGGCCTAAAC 59.874 44.000 4.42 0.00 0.00 2.01
2573 2679 5.014755 TCCTATGAACCAAAAGAGGCCTAAA 59.985 40.000 4.42 0.00 0.00 1.85
2574 2680 4.538490 TCCTATGAACCAAAAGAGGCCTAA 59.462 41.667 4.42 0.00 0.00 2.69
2575 2681 4.108570 TCCTATGAACCAAAAGAGGCCTA 58.891 43.478 4.42 0.00 0.00 3.93
2576 2682 2.919602 TCCTATGAACCAAAAGAGGCCT 59.080 45.455 3.86 3.86 0.00 5.19
2577 2683 3.366052 TCCTATGAACCAAAAGAGGCC 57.634 47.619 0.00 0.00 0.00 5.19
2578 2684 5.066593 CCTATCCTATGAACCAAAAGAGGC 58.933 45.833 0.00 0.00 0.00 4.70
2579 2685 6.500589 TCCTATCCTATGAACCAAAAGAGG 57.499 41.667 0.00 0.00 0.00 3.69
2586 2692 9.439461 CCTATGATAATCCTATCCTATGAACCA 57.561 37.037 0.00 0.00 34.10 3.67
2587 2693 9.661954 TCCTATGATAATCCTATCCTATGAACC 57.338 37.037 0.00 0.00 34.10 3.62
2605 2711 9.621239 TTCCTACAAGATTCCTATTCCTATGAT 57.379 33.333 0.00 0.00 0.00 2.45
2606 2712 9.447279 TTTCCTACAAGATTCCTATTCCTATGA 57.553 33.333 0.00 0.00 0.00 2.15
2609 2715 9.447279 TCATTTCCTACAAGATTCCTATTCCTA 57.553 33.333 0.00 0.00 0.00 2.94
2610 2716 8.337118 TCATTTCCTACAAGATTCCTATTCCT 57.663 34.615 0.00 0.00 0.00 3.36
2611 2717 8.432805 TCTCATTTCCTACAAGATTCCTATTCC 58.567 37.037 0.00 0.00 0.00 3.01
2613 2719 9.790344 CATCTCATTTCCTACAAGATTCCTATT 57.210 33.333 0.00 0.00 0.00 1.73
2614 2720 9.163894 TCATCTCATTTCCTACAAGATTCCTAT 57.836 33.333 0.00 0.00 0.00 2.57
2615 2721 8.424918 GTCATCTCATTTCCTACAAGATTCCTA 58.575 37.037 0.00 0.00 0.00 2.94
2616 2722 7.092712 TGTCATCTCATTTCCTACAAGATTCCT 60.093 37.037 0.00 0.00 0.00 3.36
2617 2723 7.050377 TGTCATCTCATTTCCTACAAGATTCC 58.950 38.462 0.00 0.00 0.00 3.01
2618 2724 8.557864 CATGTCATCTCATTTCCTACAAGATTC 58.442 37.037 0.00 0.00 0.00 2.52
2619 2725 8.051535 ACATGTCATCTCATTTCCTACAAGATT 58.948 33.333 0.00 0.00 0.00 2.40
2620 2726 7.571919 ACATGTCATCTCATTTCCTACAAGAT 58.428 34.615 0.00 0.00 0.00 2.40
2621 2727 6.950842 ACATGTCATCTCATTTCCTACAAGA 58.049 36.000 0.00 0.00 0.00 3.02
2622 2728 8.899427 ATACATGTCATCTCATTTCCTACAAG 57.101 34.615 0.00 0.00 0.00 3.16
2623 2729 8.708378 AGATACATGTCATCTCATTTCCTACAA 58.292 33.333 0.00 0.00 0.00 2.41
2624 2730 8.255111 AGATACATGTCATCTCATTTCCTACA 57.745 34.615 0.00 0.00 0.00 2.74
2625 2731 8.755696 GAGATACATGTCATCTCATTTCCTAC 57.244 38.462 24.95 8.46 45.17 3.18
2634 2740 9.368674 CATAGGATTTGAGATACATGTCATCTC 57.631 37.037 24.04 24.04 45.76 2.75
2635 2741 9.097946 TCATAGGATTTGAGATACATGTCATCT 57.902 33.333 0.00 9.42 35.43 2.90
2636 2742 9.368674 CTCATAGGATTTGAGATACATGTCATC 57.631 37.037 0.00 4.47 42.63 2.92
2637 2743 8.878211 ACTCATAGGATTTGAGATACATGTCAT 58.122 33.333 0.00 0.00 42.63 3.06
2638 2744 8.255111 ACTCATAGGATTTGAGATACATGTCA 57.745 34.615 0.00 0.00 42.63 3.58
2639 2745 9.853555 CTACTCATAGGATTTGAGATACATGTC 57.146 37.037 0.00 0.00 42.63 3.06
2656 2762 9.703892 CATCTTGTTTCCTATTCCTACTCATAG 57.296 37.037 0.00 0.00 0.00 2.23
2657 2763 9.213777 ACATCTTGTTTCCTATTCCTACTCATA 57.786 33.333 0.00 0.00 0.00 2.15
2658 2764 8.095452 ACATCTTGTTTCCTATTCCTACTCAT 57.905 34.615 0.00 0.00 0.00 2.90
2659 2765 7.180229 TGACATCTTGTTTCCTATTCCTACTCA 59.820 37.037 0.00 0.00 0.00 3.41
2660 2766 7.556844 TGACATCTTGTTTCCTATTCCTACTC 58.443 38.462 0.00 0.00 0.00 2.59
2661 2767 7.496346 TGACATCTTGTTTCCTATTCCTACT 57.504 36.000 0.00 0.00 0.00 2.57
2662 2768 8.738645 AATGACATCTTGTTTCCTATTCCTAC 57.261 34.615 0.00 0.00 0.00 3.18
2663 2769 9.177608 CAAATGACATCTTGTTTCCTATTCCTA 57.822 33.333 0.00 0.00 0.00 2.94
2664 2770 7.123247 CCAAATGACATCTTGTTTCCTATTCCT 59.877 37.037 0.00 0.00 0.00 3.36
2665 2771 7.093771 ACCAAATGACATCTTGTTTCCTATTCC 60.094 37.037 0.00 0.00 0.00 3.01
2666 2772 7.830739 ACCAAATGACATCTTGTTTCCTATTC 58.169 34.615 0.00 0.00 0.00 1.75
2667 2773 7.781324 ACCAAATGACATCTTGTTTCCTATT 57.219 32.000 0.00 0.00 0.00 1.73
2668 2774 7.451255 TCAACCAAATGACATCTTGTTTCCTAT 59.549 33.333 0.00 0.00 0.00 2.57
2669 2775 6.775142 TCAACCAAATGACATCTTGTTTCCTA 59.225 34.615 0.00 0.00 0.00 2.94
2670 2776 5.598005 TCAACCAAATGACATCTTGTTTCCT 59.402 36.000 0.00 0.00 0.00 3.36
2671 2777 5.841810 TCAACCAAATGACATCTTGTTTCC 58.158 37.500 0.00 0.00 0.00 3.13
2683 2789 6.669125 ATTCCTTTGATGTCAACCAAATGA 57.331 33.333 0.00 5.19 35.28 2.57
2684 2790 7.733402 AAATTCCTTTGATGTCAACCAAATG 57.267 32.000 0.00 3.42 35.28 2.32
2685 2791 8.750515 AAAAATTCCTTTGATGTCAACCAAAT 57.249 26.923 0.00 0.00 35.28 2.32
2686 2792 7.281999 GGAAAAATTCCTTTGATGTCAACCAAA 59.718 33.333 1.86 4.41 46.57 3.28
2687 2793 6.765512 GGAAAAATTCCTTTGATGTCAACCAA 59.234 34.615 1.86 0.00 46.57 3.67
2688 2794 6.287525 GGAAAAATTCCTTTGATGTCAACCA 58.712 36.000 1.86 0.00 46.57 3.67
2689 2795 6.785488 GGAAAAATTCCTTTGATGTCAACC 57.215 37.500 1.86 0.00 46.57 3.77
2701 2807 8.285329 GAGCCTAGACTCAATGGAAAAATTCCT 61.285 40.741 10.28 0.00 42.21 3.36
2702 2808 6.183360 GAGCCTAGACTCAATGGAAAAATTCC 60.183 42.308 0.51 2.12 42.14 3.01
2703 2809 6.601217 AGAGCCTAGACTCAATGGAAAAATTC 59.399 38.462 8.89 0.00 39.26 2.17
2704 2810 6.488715 AGAGCCTAGACTCAATGGAAAAATT 58.511 36.000 8.89 0.00 39.26 1.82
2705 2811 6.072199 AGAGCCTAGACTCAATGGAAAAAT 57.928 37.500 8.89 0.00 39.26 1.82
2706 2812 5.505181 AGAGCCTAGACTCAATGGAAAAA 57.495 39.130 8.89 0.00 39.26 1.94
2707 2813 5.505181 AAGAGCCTAGACTCAATGGAAAA 57.495 39.130 8.89 0.00 39.26 2.29
2708 2814 5.505181 AAAGAGCCTAGACTCAATGGAAA 57.495 39.130 8.89 0.00 39.26 3.13
2709 2815 5.505181 AAAAGAGCCTAGACTCAATGGAA 57.495 39.130 8.89 0.00 39.26 3.53
2710 2816 5.505181 AAAAAGAGCCTAGACTCAATGGA 57.495 39.130 8.89 0.00 39.26 3.41
2730 2836 9.540538 TCCTCCACATTTCATAGGAAAATAAAA 57.459 29.630 6.65 0.00 45.52 1.52
2731 2837 9.713684 ATCCTCCACATTTCATAGGAAAATAAA 57.286 29.630 6.65 0.00 45.52 1.40
2734 2840 7.946776 CCTATCCTCCACATTTCATAGGAAAAT 59.053 37.037 6.65 0.00 45.52 1.82
2735 2841 7.128728 TCCTATCCTCCACATTTCATAGGAAAA 59.871 37.037 6.65 0.00 45.52 2.29
2736 2842 6.619437 TCCTATCCTCCACATTTCATAGGAAA 59.381 38.462 4.85 4.85 46.36 3.13
2737 2843 6.150332 TCCTATCCTCCACATTTCATAGGAA 58.850 40.000 3.47 0.00 39.17 3.36
2738 2844 5.726560 TCCTATCCTCCACATTTCATAGGA 58.273 41.667 2.01 2.01 39.61 2.94
2739 2845 6.234177 GTTCCTATCCTCCACATTTCATAGG 58.766 44.000 0.00 0.00 35.93 2.57
2740 2846 6.183361 TGGTTCCTATCCTCCACATTTCATAG 60.183 42.308 0.00 0.00 0.00 2.23
2741 2847 5.669904 TGGTTCCTATCCTCCACATTTCATA 59.330 40.000 0.00 0.00 0.00 2.15
2742 2848 4.478317 TGGTTCCTATCCTCCACATTTCAT 59.522 41.667 0.00 0.00 0.00 2.57
2743 2849 3.849574 TGGTTCCTATCCTCCACATTTCA 59.150 43.478 0.00 0.00 0.00 2.69
2744 2850 4.503714 TGGTTCCTATCCTCCACATTTC 57.496 45.455 0.00 0.00 0.00 2.17
2745 2851 4.946160 TTGGTTCCTATCCTCCACATTT 57.054 40.909 0.00 0.00 0.00 2.32
2746 2852 4.141158 GGATTGGTTCCTATCCTCCACATT 60.141 45.833 19.71 0.00 41.78 2.71
2747 2853 3.395941 GGATTGGTTCCTATCCTCCACAT 59.604 47.826 19.71 0.00 41.78 3.21
2748 2854 2.777692 GGATTGGTTCCTATCCTCCACA 59.222 50.000 19.71 0.00 41.78 4.17
2749 2855 3.493767 GGATTGGTTCCTATCCTCCAC 57.506 52.381 19.71 0.00 41.78 4.02
2768 2874 6.649041 AATGGATTCCTATTCCTCCATAGG 57.351 41.667 3.95 0.85 45.51 2.57
2793 2899 5.544176 TCCTTTAGAGCCCTATGGTTCATAG 59.456 44.000 3.84 7.70 43.89 2.23
2794 2900 5.473273 TCCTTTAGAGCCCTATGGTTCATA 58.527 41.667 3.84 0.00 43.89 2.15
2795 2901 4.307259 TCCTTTAGAGCCCTATGGTTCAT 58.693 43.478 3.84 0.00 43.89 2.57
2796 2902 3.731431 TCCTTTAGAGCCCTATGGTTCA 58.269 45.455 3.84 0.00 43.89 3.18
2797 2903 4.772886 TTCCTTTAGAGCCCTATGGTTC 57.227 45.455 0.00 0.00 41.91 3.62
2798 2904 5.530176 TTTTCCTTTAGAGCCCTATGGTT 57.470 39.130 0.00 0.00 0.00 3.67
2799 2905 5.530176 TTTTTCCTTTAGAGCCCTATGGT 57.470 39.130 0.00 0.00 0.00 3.55
2829 2935 9.459094 AAAGGAATTCTAGAGGATAGGATTCTT 57.541 33.333 13.16 5.61 38.80 2.52
2830 2936 8.879227 CAAAGGAATTCTAGAGGATAGGATTCT 58.121 37.037 13.16 1.23 38.80 2.40
2831 2937 8.875168 TCAAAGGAATTCTAGAGGATAGGATTC 58.125 37.037 5.23 7.20 38.32 2.52
2832 2938 8.805145 TCAAAGGAATTCTAGAGGATAGGATT 57.195 34.615 5.23 0.00 0.00 3.01
2833 2939 8.805145 TTCAAAGGAATTCTAGAGGATAGGAT 57.195 34.615 5.23 0.00 0.00 3.24
2834 2940 8.624019 TTTCAAAGGAATTCTAGAGGATAGGA 57.376 34.615 5.23 0.00 31.93 2.94
2835 2941 9.859152 AATTTCAAAGGAATTCTAGAGGATAGG 57.141 33.333 5.23 0.00 31.93 2.57
2837 2943 9.853177 GGAATTTCAAAGGAATTCTAGAGGATA 57.147 33.333 5.23 0.00 31.93 2.59
2838 2944 8.564370 AGGAATTTCAAAGGAATTCTAGAGGAT 58.436 33.333 5.23 0.00 31.93 3.24
2839 2945 7.933223 AGGAATTTCAAAGGAATTCTAGAGGA 58.067 34.615 5.23 0.00 31.93 3.71
2840 2946 8.052141 AGAGGAATTTCAAAGGAATTCTAGAGG 58.948 37.037 5.23 0.00 31.93 3.69
2845 2951 8.807118 GGTTTAGAGGAATTTCAAAGGAATTCT 58.193 33.333 5.23 0.00 31.93 2.40
2846 2952 8.585018 TGGTTTAGAGGAATTTCAAAGGAATTC 58.415 33.333 0.00 0.00 31.93 2.17
2847 2953 8.491045 TGGTTTAGAGGAATTTCAAAGGAATT 57.509 30.769 0.00 0.00 31.93 2.17
2848 2954 8.491045 TTGGTTTAGAGGAATTTCAAAGGAAT 57.509 30.769 0.00 0.00 31.93 3.01
2849 2955 7.906199 TTGGTTTAGAGGAATTTCAAAGGAA 57.094 32.000 0.00 0.00 0.00 3.36
2850 2956 7.906199 TTTGGTTTAGAGGAATTTCAAAGGA 57.094 32.000 0.00 0.00 0.00 3.36
2852 2958 7.951591 TCCTTTGGTTTAGAGGAATTTCAAAG 58.048 34.615 0.00 0.00 36.67 2.77
2853 2959 7.906199 TCCTTTGGTTTAGAGGAATTTCAAA 57.094 32.000 0.00 0.00 36.67 2.69
2854 2960 7.524717 CTCCTTTGGTTTAGAGGAATTTCAA 57.475 36.000 0.00 0.00 39.00 2.69
2863 2969 2.678190 CGAGGCCTCCTTTGGTTTAGAG 60.678 54.545 27.20 4.07 31.76 2.43
2864 2970 1.278127 CGAGGCCTCCTTTGGTTTAGA 59.722 52.381 27.20 0.00 31.76 2.10
2865 2971 1.679032 CCGAGGCCTCCTTTGGTTTAG 60.679 57.143 27.20 8.52 31.76 1.85
2866 2972 0.326927 CCGAGGCCTCCTTTGGTTTA 59.673 55.000 27.20 0.00 31.76 2.01
2867 2973 1.074951 CCGAGGCCTCCTTTGGTTT 59.925 57.895 27.20 0.00 31.76 3.27
2868 2974 1.842381 CTCCGAGGCCTCCTTTGGTT 61.842 60.000 27.20 0.00 31.76 3.67
2869 2975 2.203938 TCCGAGGCCTCCTTTGGT 60.204 61.111 27.20 0.00 31.76 3.67
2870 2976 1.842381 AACTCCGAGGCCTCCTTTGG 61.842 60.000 27.20 21.21 31.76 3.28
2871 2977 0.036875 AAACTCCGAGGCCTCCTTTG 59.963 55.000 27.20 16.20 31.76 2.77
2872 2978 0.036875 CAAACTCCGAGGCCTCCTTT 59.963 55.000 27.20 15.34 31.76 3.11
2873 2979 1.128188 ACAAACTCCGAGGCCTCCTT 61.128 55.000 27.20 10.21 31.76 3.36
2874 2980 1.536662 ACAAACTCCGAGGCCTCCT 60.537 57.895 27.20 4.08 36.03 3.69
2875 2981 1.079057 GACAAACTCCGAGGCCTCC 60.079 63.158 27.20 9.59 0.00 4.30
2876 2982 0.390472 CTGACAAACTCCGAGGCCTC 60.390 60.000 23.79 23.79 0.00 4.70
2877 2983 0.832135 TCTGACAAACTCCGAGGCCT 60.832 55.000 3.86 3.86 0.00 5.19
2878 2984 0.250513 ATCTGACAAACTCCGAGGCC 59.749 55.000 0.00 0.00 0.00 5.19
2879 2985 1.646189 GATCTGACAAACTCCGAGGC 58.354 55.000 0.00 0.00 0.00 4.70
2880 2986 1.550524 TGGATCTGACAAACTCCGAGG 59.449 52.381 0.00 0.00 0.00 4.63
2881 2987 2.886081 CTGGATCTGACAAACTCCGAG 58.114 52.381 0.00 0.00 0.00 4.63
2882 2988 1.066858 GCTGGATCTGACAAACTCCGA 60.067 52.381 0.00 0.00 0.00 4.55
2883 2989 1.066573 AGCTGGATCTGACAAACTCCG 60.067 52.381 0.00 0.00 0.00 4.63
2884 2990 2.746362 CAAGCTGGATCTGACAAACTCC 59.254 50.000 0.00 0.00 0.00 3.85
2885 2991 3.406764 ACAAGCTGGATCTGACAAACTC 58.593 45.455 0.00 0.00 0.00 3.01
2886 2992 3.498774 ACAAGCTGGATCTGACAAACT 57.501 42.857 0.00 0.00 0.00 2.66
2887 2993 3.565482 TCAACAAGCTGGATCTGACAAAC 59.435 43.478 0.00 0.00 0.00 2.93
2888 2994 3.819368 TCAACAAGCTGGATCTGACAAA 58.181 40.909 0.00 0.00 0.00 2.83
2889 2995 3.490439 TCAACAAGCTGGATCTGACAA 57.510 42.857 0.00 0.00 0.00 3.18
2890 2996 3.603532 GATCAACAAGCTGGATCTGACA 58.396 45.455 0.00 0.00 35.64 3.58
2891 2997 2.941720 GGATCAACAAGCTGGATCTGAC 59.058 50.000 14.02 2.82 37.99 3.51
2892 2998 2.573009 TGGATCAACAAGCTGGATCTGA 59.427 45.455 14.02 6.40 37.99 3.27
2893 2999 2.995283 TGGATCAACAAGCTGGATCTG 58.005 47.619 14.02 0.33 37.99 2.90
2894 3000 3.552875 CATGGATCAACAAGCTGGATCT 58.447 45.455 14.02 0.00 37.99 2.75
2895 3001 2.621998 CCATGGATCAACAAGCTGGATC 59.378 50.000 5.56 2.25 37.34 3.36
2896 3002 2.242965 TCCATGGATCAACAAGCTGGAT 59.757 45.455 11.44 0.00 0.00 3.41
2897 3003 1.634973 TCCATGGATCAACAAGCTGGA 59.365 47.619 11.44 0.00 0.00 3.86
2898 3004 2.022195 CTCCATGGATCAACAAGCTGG 58.978 52.381 16.63 0.00 0.00 4.85
2899 3005 2.022195 CCTCCATGGATCAACAAGCTG 58.978 52.381 16.63 0.00 38.35 4.24
2900 3006 1.918262 TCCTCCATGGATCAACAAGCT 59.082 47.619 16.63 0.00 40.56 3.74
2901 3007 2.425143 TCCTCCATGGATCAACAAGC 57.575 50.000 16.63 0.00 40.56 4.01
2902 3008 5.927281 AAATTCCTCCATGGATCAACAAG 57.073 39.130 16.63 0.88 45.68 3.16
2903 3009 5.543405 ACAAAATTCCTCCATGGATCAACAA 59.457 36.000 16.63 4.26 45.68 2.83
2904 3010 5.085920 ACAAAATTCCTCCATGGATCAACA 58.914 37.500 16.63 0.00 45.68 3.33
2905 3011 5.665916 ACAAAATTCCTCCATGGATCAAC 57.334 39.130 16.63 0.00 45.68 3.18
2906 3012 5.893255 CCTACAAAATTCCTCCATGGATCAA 59.107 40.000 16.63 11.37 45.68 2.57
2907 3013 5.193527 TCCTACAAAATTCCTCCATGGATCA 59.806 40.000 16.63 1.16 45.68 2.92
2908 3014 5.694995 TCCTACAAAATTCCTCCATGGATC 58.305 41.667 16.63 0.00 45.68 3.36
2909 3015 5.732331 TCCTACAAAATTCCTCCATGGAT 57.268 39.130 16.63 0.00 45.68 3.41
2910 3016 5.732331 ATCCTACAAAATTCCTCCATGGA 57.268 39.130 15.27 15.27 44.51 3.41
2911 3017 6.796785 AAATCCTACAAAATTCCTCCATGG 57.203 37.500 4.97 4.97 37.10 3.66
2912 3018 7.839907 TGAAAATCCTACAAAATTCCTCCATG 58.160 34.615 0.00 0.00 0.00 3.66
2913 3019 8.613922 ATGAAAATCCTACAAAATTCCTCCAT 57.386 30.769 0.00 0.00 0.00 3.41
2914 3020 9.189156 CTATGAAAATCCTACAAAATTCCTCCA 57.811 33.333 0.00 0.00 0.00 3.86
2915 3021 8.633561 CCTATGAAAATCCTACAAAATTCCTCC 58.366 37.037 0.00 0.00 0.00 4.30
2916 3022 9.408648 TCCTATGAAAATCCTACAAAATTCCTC 57.591 33.333 0.00 0.00 0.00 3.71
2917 3023 9.942526 ATCCTATGAAAATCCTACAAAATTCCT 57.057 29.630 0.00 0.00 0.00 3.36
2957 3063 6.155136 CCAAAGAGCTCTGAAGGAATTTTTC 58.845 40.000 19.06 0.00 0.00 2.29
2958 3064 5.600069 ACCAAAGAGCTCTGAAGGAATTTTT 59.400 36.000 27.00 9.59 0.00 1.94
2959 3065 5.143369 ACCAAAGAGCTCTGAAGGAATTTT 58.857 37.500 27.00 10.23 0.00 1.82
2960 3066 4.734266 ACCAAAGAGCTCTGAAGGAATTT 58.266 39.130 27.00 10.86 0.00 1.82
2961 3067 4.379302 ACCAAAGAGCTCTGAAGGAATT 57.621 40.909 27.00 11.51 0.00 2.17
2962 3068 4.379302 AACCAAAGAGCTCTGAAGGAAT 57.621 40.909 27.00 16.39 0.00 3.01
2963 3069 3.864789 AACCAAAGAGCTCTGAAGGAA 57.135 42.857 27.00 0.00 0.00 3.36
2964 3070 3.117888 ACAAACCAAAGAGCTCTGAAGGA 60.118 43.478 27.00 0.00 0.00 3.36
2965 3071 3.217626 ACAAACCAAAGAGCTCTGAAGG 58.782 45.455 19.06 20.58 0.00 3.46
2966 3072 4.453819 CCTACAAACCAAAGAGCTCTGAAG 59.546 45.833 19.06 11.19 0.00 3.02
2967 3073 4.102524 TCCTACAAACCAAAGAGCTCTGAA 59.897 41.667 19.06 0.00 0.00 3.02
2968 3074 3.646162 TCCTACAAACCAAAGAGCTCTGA 59.354 43.478 19.06 2.19 0.00 3.27
2969 3075 4.008074 TCCTACAAACCAAAGAGCTCTG 57.992 45.455 19.06 7.57 0.00 3.35
2970 3076 4.706842 TTCCTACAAACCAAAGAGCTCT 57.293 40.909 11.45 11.45 0.00 4.09
2971 3077 5.003804 TCATTCCTACAAACCAAAGAGCTC 58.996 41.667 5.27 5.27 0.00 4.09
2972 3078 4.985538 TCATTCCTACAAACCAAAGAGCT 58.014 39.130 0.00 0.00 0.00 4.09
2973 3079 5.705609 TTCATTCCTACAAACCAAAGAGC 57.294 39.130 0.00 0.00 0.00 4.09
2974 3080 7.177392 AGGATTTCATTCCTACAAACCAAAGAG 59.823 37.037 0.00 0.00 44.50 2.85
2975 3081 7.010160 AGGATTTCATTCCTACAAACCAAAGA 58.990 34.615 0.00 0.00 44.50 2.52
2976 3082 7.232118 AGGATTTCATTCCTACAAACCAAAG 57.768 36.000 0.00 0.00 44.50 2.77
3004 3110 7.566658 AGGATAGAAAGAATTCCTCCATAGG 57.433 40.000 0.65 0.00 45.21 2.57
3005 3111 8.654997 TGAAGGATAGAAAGAATTCCTCCATAG 58.345 37.037 0.65 0.00 36.12 2.23
3006 3112 8.432805 GTGAAGGATAGAAAGAATTCCTCCATA 58.567 37.037 0.65 0.00 36.12 2.74
3007 3113 7.092264 TGTGAAGGATAGAAAGAATTCCTCCAT 60.092 37.037 0.65 0.00 36.12 3.41
3008 3114 6.215431 TGTGAAGGATAGAAAGAATTCCTCCA 59.785 38.462 0.65 0.00 36.12 3.86
3009 3115 6.653989 TGTGAAGGATAGAAAGAATTCCTCC 58.346 40.000 0.65 0.00 36.12 4.30
3010 3116 8.744568 AATGTGAAGGATAGAAAGAATTCCTC 57.255 34.615 0.65 0.00 36.12 3.71
3011 3117 9.183368 GAAATGTGAAGGATAGAAAGAATTCCT 57.817 33.333 0.65 0.00 36.12 3.36
3012 3118 8.960591 TGAAATGTGAAGGATAGAAAGAATTCC 58.039 33.333 0.65 0.00 36.12 3.01
3016 3122 9.618890 CCTATGAAATGTGAAGGATAGAAAGAA 57.381 33.333 0.00 0.00 0.00 2.52
3017 3123 8.992349 TCCTATGAAATGTGAAGGATAGAAAGA 58.008 33.333 0.00 0.00 31.41 2.52
3018 3124 9.618890 TTCCTATGAAATGTGAAGGATAGAAAG 57.381 33.333 0.00 0.00 36.28 2.62
3019 3125 9.973661 TTTCCTATGAAATGTGAAGGATAGAAA 57.026 29.630 0.00 0.00 36.28 2.52
3020 3126 9.973661 TTTTCCTATGAAATGTGAAGGATAGAA 57.026 29.630 0.00 0.00 40.08 2.10
3040 3146 8.548877 TGAGTCTAGGCTAATGTTTATTTTCCT 58.451 33.333 0.00 0.00 33.86 3.36
3041 3147 8.732746 TGAGTCTAGGCTAATGTTTATTTTCC 57.267 34.615 0.00 0.00 0.00 3.13
3044 3150 9.125026 CCATTGAGTCTAGGCTAATGTTTATTT 57.875 33.333 17.62 0.00 0.00 1.40
3045 3151 8.494433 TCCATTGAGTCTAGGCTAATGTTTATT 58.506 33.333 17.62 0.00 0.00 1.40
3046 3152 8.034313 TCCATTGAGTCTAGGCTAATGTTTAT 57.966 34.615 17.62 0.00 0.00 1.40
3047 3153 7.432148 TCCATTGAGTCTAGGCTAATGTTTA 57.568 36.000 17.62 7.18 0.00 2.01
3048 3154 6.313519 TCCATTGAGTCTAGGCTAATGTTT 57.686 37.500 17.62 0.00 0.00 2.83
3049 3155 5.957771 TCCATTGAGTCTAGGCTAATGTT 57.042 39.130 17.62 0.00 0.00 2.71
3050 3156 5.957771 TTCCATTGAGTCTAGGCTAATGT 57.042 39.130 17.62 0.00 0.00 2.71
3051 3157 7.630242 TTTTTCCATTGAGTCTAGGCTAATG 57.370 36.000 0.00 8.01 0.00 1.90
3072 3178 7.310609 CCCTTTGATTCACACCATAGGATTTTT 60.311 37.037 0.00 0.00 34.69 1.94
3073 3179 6.155049 CCCTTTGATTCACACCATAGGATTTT 59.845 38.462 0.00 0.00 34.69 1.82
3074 3180 5.658190 CCCTTTGATTCACACCATAGGATTT 59.342 40.000 0.00 0.00 34.69 2.17
3075 3181 5.203528 CCCTTTGATTCACACCATAGGATT 58.796 41.667 0.00 0.00 34.69 3.01
3076 3182 4.796606 CCCTTTGATTCACACCATAGGAT 58.203 43.478 0.00 0.00 34.69 3.24
3077 3183 3.624707 GCCCTTTGATTCACACCATAGGA 60.625 47.826 0.00 0.00 34.69 2.94
3078 3184 2.689983 GCCCTTTGATTCACACCATAGG 59.310 50.000 0.00 0.00 33.22 2.57
3079 3185 3.355378 TGCCCTTTGATTCACACCATAG 58.645 45.455 0.00 0.00 0.00 2.23
3080 3186 3.448093 TGCCCTTTGATTCACACCATA 57.552 42.857 0.00 0.00 0.00 2.74
3081 3187 2.307496 TGCCCTTTGATTCACACCAT 57.693 45.000 0.00 0.00 0.00 3.55
3082 3188 2.170166 GATGCCCTTTGATTCACACCA 58.830 47.619 0.00 0.00 0.00 4.17
3083 3189 2.424956 GAGATGCCCTTTGATTCACACC 59.575 50.000 0.00 0.00 0.00 4.16
3084 3190 2.424956 GGAGATGCCCTTTGATTCACAC 59.575 50.000 0.00 0.00 0.00 3.82
3085 3191 2.309755 AGGAGATGCCCTTTGATTCACA 59.690 45.455 0.00 0.00 37.37 3.58
3086 3192 3.010200 AGGAGATGCCCTTTGATTCAC 57.990 47.619 0.00 0.00 37.37 3.18
3087 3193 3.744940 AAGGAGATGCCCTTTGATTCA 57.255 42.857 0.00 0.00 43.68 2.57
3095 3201 4.050757 AGGAATAGAAAAGGAGATGCCCT 58.949 43.478 0.00 0.00 38.42 5.19
3096 3202 4.445557 AGGAATAGAAAAGGAGATGCCC 57.554 45.455 0.00 0.00 37.37 5.36
3097 3203 5.414144 GCATAGGAATAGAAAAGGAGATGCC 59.586 44.000 0.00 0.00 31.89 4.40
3098 3204 6.000219 TGCATAGGAATAGAAAAGGAGATGC 59.000 40.000 0.00 0.00 37.16 3.91
3099 3205 9.381033 CTATGCATAGGAATAGAAAAGGAGATG 57.619 37.037 23.70 0.00 34.94 2.90
3100 3206 9.331466 TCTATGCATAGGAATAGAAAAGGAGAT 57.669 33.333 29.02 0.00 38.48 2.75
3101 3207 8.727100 TCTATGCATAGGAATAGAAAAGGAGA 57.273 34.615 29.02 7.17 38.48 3.71
3111 3217 9.170734 GCATCTCAAATTCTATGCATAGGAATA 57.829 33.333 29.02 15.02 43.30 1.75
3112 3218 8.053026 GCATCTCAAATTCTATGCATAGGAAT 57.947 34.615 29.02 22.76 43.30 3.01
3113 3219 7.444629 GCATCTCAAATTCTATGCATAGGAA 57.555 36.000 29.02 21.79 43.30 3.36
3120 3226 6.068473 TGACATGCATCTCAAATTCTATGC 57.932 37.500 1.73 0.00 43.92 3.14
3134 3240 7.720074 AGTCATAGAAAATGAGATGACATGCAT 59.280 33.333 14.37 0.00 46.94 3.96
3135 3241 7.052248 AGTCATAGAAAATGAGATGACATGCA 58.948 34.615 14.37 0.00 46.94 3.96
3136 3242 7.493743 AGTCATAGAAAATGAGATGACATGC 57.506 36.000 14.37 0.00 46.94 4.06
3137 3243 9.932699 GAAAGTCATAGAAAATGAGATGACATG 57.067 33.333 14.37 0.00 46.94 3.21
3138 3244 9.118300 GGAAAGTCATAGAAAATGAGATGACAT 57.882 33.333 14.37 1.96 46.94 3.06
3139 3245 8.324306 AGGAAAGTCATAGAAAATGAGATGACA 58.676 33.333 14.37 0.00 46.94 3.58
3140 3246 8.729805 AGGAAAGTCATAGAAAATGAGATGAC 57.270 34.615 5.86 5.86 45.57 3.06
3144 3250 9.838339 GGAATAGGAAAGTCATAGAAAATGAGA 57.162 33.333 0.00 0.00 0.00 3.27
3145 3251 9.844257 AGGAATAGGAAAGTCATAGAAAATGAG 57.156 33.333 0.00 0.00 0.00 2.90
3155 3261 9.927081 AACAAATCATAGGAATAGGAAAGTCAT 57.073 29.630 0.00 0.00 0.00 3.06
3168 3274 9.793259 GGTTCATAGGATTAACAAATCATAGGA 57.207 33.333 3.82 3.82 35.40 2.94
3169 3275 9.573166 TGGTTCATAGGATTAACAAATCATAGG 57.427 33.333 0.99 0.32 30.31 2.57
3173 3279 9.527157 TCTTTGGTTCATAGGATTAACAAATCA 57.473 29.630 0.00 0.00 0.00 2.57
3176 3282 8.802267 CCTTCTTTGGTTCATAGGATTAACAAA 58.198 33.333 0.00 0.00 0.00 2.83
3177 3283 7.093945 GCCTTCTTTGGTTCATAGGATTAACAA 60.094 37.037 0.00 0.00 0.00 2.83
3178 3284 6.377146 GCCTTCTTTGGTTCATAGGATTAACA 59.623 38.462 0.00 0.00 0.00 2.41
3179 3285 6.183360 GGCCTTCTTTGGTTCATAGGATTAAC 60.183 42.308 0.00 0.00 0.00 2.01
3180 3286 5.891551 GGCCTTCTTTGGTTCATAGGATTAA 59.108 40.000 0.00 0.00 0.00 1.40
3181 3287 5.193728 AGGCCTTCTTTGGTTCATAGGATTA 59.806 40.000 0.00 0.00 0.00 1.75
3182 3288 4.017130 AGGCCTTCTTTGGTTCATAGGATT 60.017 41.667 0.00 0.00 0.00 3.01
3183 3289 3.529319 AGGCCTTCTTTGGTTCATAGGAT 59.471 43.478 0.00 0.00 0.00 3.24
3184 3290 2.919602 AGGCCTTCTTTGGTTCATAGGA 59.080 45.455 0.00 0.00 0.00 2.94
3185 3291 3.372440 AGGCCTTCTTTGGTTCATAGG 57.628 47.619 0.00 0.00 0.00 2.57
3186 3292 3.879892 GCTAGGCCTTCTTTGGTTCATAG 59.120 47.826 12.58 0.00 0.00 2.23
3187 3293 3.371595 GGCTAGGCCTTCTTTGGTTCATA 60.372 47.826 12.58 0.00 46.69 2.15
3188 3294 2.621668 GGCTAGGCCTTCTTTGGTTCAT 60.622 50.000 12.58 0.00 46.69 2.57
3189 3295 1.271926 GGCTAGGCCTTCTTTGGTTCA 60.272 52.381 12.58 0.00 46.69 3.18
3190 3296 1.464734 GGCTAGGCCTTCTTTGGTTC 58.535 55.000 12.58 0.00 46.69 3.62
3191 3297 3.672066 GGCTAGGCCTTCTTTGGTT 57.328 52.632 12.58 0.00 46.69 3.67
3202 3308 0.960861 AACGAGGCAAAAGGCTAGGC 60.961 55.000 8.55 8.55 44.01 3.93
3203 3309 1.087501 GAACGAGGCAAAAGGCTAGG 58.912 55.000 0.00 0.00 44.01 3.02
3204 3310 2.100605 AGAACGAGGCAAAAGGCTAG 57.899 50.000 0.00 0.00 44.01 3.42
3205 3311 2.552315 CAAAGAACGAGGCAAAAGGCTA 59.448 45.455 0.00 0.00 44.01 3.93
3206 3312 1.338020 CAAAGAACGAGGCAAAAGGCT 59.662 47.619 0.00 0.00 44.01 4.58
3207 3313 1.067060 ACAAAGAACGAGGCAAAAGGC 59.933 47.619 0.00 0.00 43.74 4.35
3208 3314 2.731217 CACAAAGAACGAGGCAAAAGG 58.269 47.619 0.00 0.00 0.00 3.11
3209 3315 2.119457 GCACAAAGAACGAGGCAAAAG 58.881 47.619 0.00 0.00 0.00 2.27
3210 3316 1.474478 TGCACAAAGAACGAGGCAAAA 59.526 42.857 0.00 0.00 0.00 2.44
3211 3317 1.098869 TGCACAAAGAACGAGGCAAA 58.901 45.000 0.00 0.00 0.00 3.68
3212 3318 1.317613 ATGCACAAAGAACGAGGCAA 58.682 45.000 0.00 0.00 34.64 4.52
3213 3319 2.076100 CTATGCACAAAGAACGAGGCA 58.924 47.619 0.00 0.00 35.54 4.75
3214 3320 1.398390 CCTATGCACAAAGAACGAGGC 59.602 52.381 0.00 0.00 0.00 4.70
3215 3321 2.972625 TCCTATGCACAAAGAACGAGG 58.027 47.619 0.00 0.00 0.00 4.63
3216 3322 4.393062 ACATTCCTATGCACAAAGAACGAG 59.607 41.667 0.00 0.00 35.03 4.18
3217 3323 4.323417 ACATTCCTATGCACAAAGAACGA 58.677 39.130 0.00 0.00 35.03 3.85
3218 3324 4.685169 ACATTCCTATGCACAAAGAACG 57.315 40.909 0.00 0.00 35.03 3.95
3219 3325 8.296713 TCTTTTACATTCCTATGCACAAAGAAC 58.703 33.333 0.00 0.00 34.59 3.01
3220 3326 8.402798 TCTTTTACATTCCTATGCACAAAGAA 57.597 30.769 0.00 0.00 34.59 2.52
3221 3327 7.882791 TCTCTTTTACATTCCTATGCACAAAGA 59.117 33.333 0.00 0.00 34.85 2.52
3222 3328 8.044060 TCTCTTTTACATTCCTATGCACAAAG 57.956 34.615 0.00 0.00 35.03 2.77
3223 3329 7.994425 TCTCTTTTACATTCCTATGCACAAA 57.006 32.000 0.00 0.00 35.03 2.83
3224 3330 7.994425 TTCTCTTTTACATTCCTATGCACAA 57.006 32.000 0.00 0.00 35.03 3.33
3225 3331 7.994425 TTTCTCTTTTACATTCCTATGCACA 57.006 32.000 0.00 0.00 35.03 4.57
3226 3332 9.860898 AAATTTCTCTTTTACATTCCTATGCAC 57.139 29.630 0.00 0.00 35.03 4.57
3232 3338 8.579863 CCTGTGAAATTTCTCTTTTACATTCCT 58.420 33.333 18.64 0.00 35.08 3.36
3233 3339 8.576442 TCCTGTGAAATTTCTCTTTTACATTCC 58.424 33.333 18.64 0.00 35.08 3.01
3236 3342 9.918630 CAATCCTGTGAAATTTCTCTTTTACAT 57.081 29.630 18.64 0.00 35.08 2.29
3237 3343 8.912988 ACAATCCTGTGAAATTTCTCTTTTACA 58.087 29.630 18.64 12.02 34.60 2.41
3250 3356 7.367285 CGAAGGAATTTTACAATCCTGTGAAA 58.633 34.615 0.00 0.00 42.98 2.69
3251 3357 6.908825 CGAAGGAATTTTACAATCCTGTGAA 58.091 36.000 0.00 0.00 36.96 3.18
3252 3358 6.494893 CGAAGGAATTTTACAATCCTGTGA 57.505 37.500 0.00 0.00 36.96 3.58
3277 3383 6.437793 TCTTTGGGTTGAGTTTTACAGGAAAA 59.562 34.615 0.00 0.00 34.56 2.29
3278 3384 5.952947 TCTTTGGGTTGAGTTTTACAGGAAA 59.047 36.000 0.00 0.00 0.00 3.13
3279 3385 5.511363 TCTTTGGGTTGAGTTTTACAGGAA 58.489 37.500 0.00 0.00 0.00 3.36
3280 3386 5.118729 TCTTTGGGTTGAGTTTTACAGGA 57.881 39.130 0.00 0.00 0.00 3.86
3281 3387 5.845391 TTCTTTGGGTTGAGTTTTACAGG 57.155 39.130 0.00 0.00 0.00 4.00
3282 3388 8.716646 ATTTTTCTTTGGGTTGAGTTTTACAG 57.283 30.769 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.