Multiple sequence alignment - TraesCS1A01G329300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G329300 chr1A 100.000 3266 0 0 1 3266 518045191 518048456 0.000000e+00 6032.0
1 TraesCS1A01G329300 chr1D 95.053 2547 56 26 747 3266 422289643 422292146 0.000000e+00 3941.0
2 TraesCS1A01G329300 chr1D 72.607 303 54 18 343 636 494425719 494425437 4.520000e-09 73.1
3 TraesCS1A01G329300 chr1B 94.509 1712 62 7 1556 3266 571170888 571172568 0.000000e+00 2612.0
4 TraesCS1A01G329300 chr1B 88.319 839 44 20 747 1560 571164225 571165034 0.000000e+00 957.0
5 TraesCS1A01G329300 chr3B 75.694 1189 212 55 1097 2269 547059139 547058012 1.040000e-144 523.0
6 TraesCS1A01G329300 chr3D 81.553 309 38 15 1097 1403 419881603 419881312 1.510000e-58 237.0
7 TraesCS1A01G329300 chr3A 81.132 318 41 15 1088 1403 531447251 531447551 1.510000e-58 237.0
8 TraesCS1A01G329300 chr4D 73.198 444 91 23 1515 1950 310111031 310110608 5.680000e-28 135.0
9 TraesCS1A01G329300 chr2A 75.481 208 37 10 343 544 651818480 651818679 4.490000e-14 89.8
10 TraesCS1A01G329300 chr7A 91.071 56 3 2 1556 1610 555459796 555459850 1.260000e-09 75.0
11 TraesCS1A01G329300 chr7D 95.455 44 1 1 255 298 191792902 191792944 5.850000e-08 69.4
12 TraesCS1A01G329300 chr7D 89.130 46 1 3 385 426 488044968 488045013 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G329300 chr1A 518045191 518048456 3265 False 6032 6032 100.000 1 3266 1 chr1A.!!$F1 3265
1 TraesCS1A01G329300 chr1D 422289643 422292146 2503 False 3941 3941 95.053 747 3266 1 chr1D.!!$F1 2519
2 TraesCS1A01G329300 chr1B 571170888 571172568 1680 False 2612 2612 94.509 1556 3266 1 chr1B.!!$F2 1710
3 TraesCS1A01G329300 chr1B 571164225 571165034 809 False 957 957 88.319 747 1560 1 chr1B.!!$F1 813
4 TraesCS1A01G329300 chr3B 547058012 547059139 1127 True 523 523 75.694 1097 2269 1 chr3B.!!$R1 1172


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
585 586 0.030235 GTGTCCGGGAAAACACTTGC 59.970 55.0 15.04 0.0 41.97 4.01 F
609 610 0.035343 GTTTAGGGGGCTGGACTGTC 60.035 60.0 0.00 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1749 1817 1.136774 TGAATCGTCAGACTCGGCG 59.863 57.895 0.0 0.0 0.00 6.46 R
2320 2388 4.704540 AGACAAATATTGGACCGAATGCAA 59.295 37.500 0.0 0.0 43.55 4.08 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.478195 GTCTGGGTCATCGTCGTG 57.522 61.111 0.00 0.00 0.00 4.35
18 19 1.805945 GTCTGGGTCATCGTCGTGC 60.806 63.158 0.00 0.00 0.00 5.34
19 20 1.977009 TCTGGGTCATCGTCGTGCT 60.977 57.895 0.00 0.00 0.00 4.40
20 21 1.517257 CTGGGTCATCGTCGTGCTC 60.517 63.158 0.00 0.00 0.00 4.26
21 22 2.202756 GGGTCATCGTCGTGCTCC 60.203 66.667 0.00 0.00 0.00 4.70
22 23 2.571757 GGTCATCGTCGTGCTCCA 59.428 61.111 0.00 0.00 0.00 3.86
23 24 1.805945 GGTCATCGTCGTGCTCCAC 60.806 63.158 0.00 0.00 0.00 4.02
24 25 1.805945 GTCATCGTCGTGCTCCACC 60.806 63.158 0.00 0.00 0.00 4.61
25 26 2.509336 CATCGTCGTGCTCCACCC 60.509 66.667 0.00 0.00 0.00 4.61
26 27 2.680352 ATCGTCGTGCTCCACCCT 60.680 61.111 0.00 0.00 0.00 4.34
27 28 2.283529 ATCGTCGTGCTCCACCCTT 61.284 57.895 0.00 0.00 0.00 3.95
28 29 2.507110 ATCGTCGTGCTCCACCCTTG 62.507 60.000 0.00 0.00 0.00 3.61
29 30 3.050275 GTCGTGCTCCACCCTTGC 61.050 66.667 0.00 0.00 0.00 4.01
30 31 3.241530 TCGTGCTCCACCCTTGCT 61.242 61.111 0.00 0.00 0.00 3.91
31 32 2.743928 CGTGCTCCACCCTTGCTC 60.744 66.667 0.00 0.00 0.00 4.26
32 33 2.360475 GTGCTCCACCCTTGCTCC 60.360 66.667 0.00 0.00 0.00 4.70
33 34 2.853542 TGCTCCACCCTTGCTCCA 60.854 61.111 0.00 0.00 0.00 3.86
34 35 2.233566 TGCTCCACCCTTGCTCCAT 61.234 57.895 0.00 0.00 0.00 3.41
35 36 1.751927 GCTCCACCCTTGCTCCATG 60.752 63.158 0.00 0.00 0.00 3.66
36 37 1.687612 CTCCACCCTTGCTCCATGT 59.312 57.895 0.00 0.00 0.00 3.21
37 38 0.393537 CTCCACCCTTGCTCCATGTC 60.394 60.000 0.00 0.00 0.00 3.06
38 39 0.842030 TCCACCCTTGCTCCATGTCT 60.842 55.000 0.00 0.00 0.00 3.41
39 40 0.679002 CCACCCTTGCTCCATGTCTG 60.679 60.000 0.00 0.00 0.00 3.51
40 41 1.001641 ACCCTTGCTCCATGTCTGC 60.002 57.895 0.00 0.00 0.00 4.26
41 42 2.110967 CCCTTGCTCCATGTCTGCG 61.111 63.158 0.00 0.00 0.00 5.18
42 43 2.110967 CCTTGCTCCATGTCTGCGG 61.111 63.158 0.00 0.00 0.00 5.69
43 44 1.376424 CTTGCTCCATGTCTGCGGT 60.376 57.895 0.00 0.00 0.00 5.68
44 45 1.364626 CTTGCTCCATGTCTGCGGTC 61.365 60.000 0.00 0.00 0.00 4.79
45 46 2.887568 GCTCCATGTCTGCGGTCG 60.888 66.667 0.00 0.00 0.00 4.79
46 47 2.573869 CTCCATGTCTGCGGTCGT 59.426 61.111 0.00 0.00 0.00 4.34
47 48 1.807165 CTCCATGTCTGCGGTCGTG 60.807 63.158 5.13 5.13 0.00 4.35
48 49 2.815211 CCATGTCTGCGGTCGTGG 60.815 66.667 15.31 15.31 34.96 4.94
49 50 2.261361 CATGTCTGCGGTCGTGGA 59.739 61.111 4.26 0.00 0.00 4.02
50 51 1.153568 CATGTCTGCGGTCGTGGAT 60.154 57.895 4.26 0.00 0.00 3.41
51 52 1.153568 ATGTCTGCGGTCGTGGATG 60.154 57.895 0.00 0.00 0.00 3.51
52 53 1.888436 ATGTCTGCGGTCGTGGATGT 61.888 55.000 0.00 0.00 0.00 3.06
53 54 1.374252 GTCTGCGGTCGTGGATGTT 60.374 57.895 0.00 0.00 0.00 2.71
54 55 1.374125 TCTGCGGTCGTGGATGTTG 60.374 57.895 0.00 0.00 0.00 3.33
55 56 1.667830 CTGCGGTCGTGGATGTTGT 60.668 57.895 0.00 0.00 0.00 3.32
56 57 1.626654 CTGCGGTCGTGGATGTTGTC 61.627 60.000 0.00 0.00 0.00 3.18
57 58 2.726691 GCGGTCGTGGATGTTGTCG 61.727 63.158 0.00 0.00 0.00 4.35
58 59 1.372499 CGGTCGTGGATGTTGTCGT 60.372 57.895 0.00 0.00 0.00 4.34
59 60 1.342082 CGGTCGTGGATGTTGTCGTC 61.342 60.000 0.00 0.00 0.00 4.20
60 61 1.342082 GGTCGTGGATGTTGTCGTCG 61.342 60.000 0.00 0.00 0.00 5.12
61 62 0.386352 GTCGTGGATGTTGTCGTCGA 60.386 55.000 0.00 0.00 32.96 4.20
62 63 0.109919 TCGTGGATGTTGTCGTCGAG 60.110 55.000 0.00 0.00 32.17 4.04
63 64 0.386858 CGTGGATGTTGTCGTCGAGT 60.387 55.000 0.00 0.00 0.00 4.18
64 65 1.135888 CGTGGATGTTGTCGTCGAGTA 60.136 52.381 0.00 0.00 0.00 2.59
65 66 2.248487 GTGGATGTTGTCGTCGAGTAC 58.752 52.381 0.00 0.00 0.00 2.73
66 67 1.881324 TGGATGTTGTCGTCGAGTACA 59.119 47.619 10.68 10.68 0.00 2.90
67 68 2.248487 GGATGTTGTCGTCGAGTACAC 58.752 52.381 10.54 6.26 0.00 2.90
68 69 1.903139 GATGTTGTCGTCGAGTACACG 59.097 52.381 6.34 6.34 38.67 4.49
69 70 0.041047 TGTTGTCGTCGAGTACACGG 60.041 55.000 12.78 0.00 37.85 4.94
70 71 0.235665 GTTGTCGTCGAGTACACGGA 59.764 55.000 12.78 0.40 37.85 4.69
71 72 0.235665 TTGTCGTCGAGTACACGGAC 59.764 55.000 12.78 12.70 37.85 4.79
72 73 1.225583 GTCGTCGAGTACACGGACG 60.226 63.158 21.57 21.57 37.85 4.79
73 74 2.572647 CGTCGAGTACACGGACGC 60.573 66.667 18.23 6.25 33.43 5.19
74 75 2.202401 GTCGAGTACACGGACGCC 60.202 66.667 12.78 0.00 0.00 5.68
75 76 3.434319 TCGAGTACACGGACGCCC 61.434 66.667 12.78 0.00 0.00 6.13
76 77 3.437795 CGAGTACACGGACGCCCT 61.438 66.667 4.65 0.00 0.00 5.19
77 78 2.488820 GAGTACACGGACGCCCTC 59.511 66.667 0.00 0.00 0.00 4.30
78 79 3.392595 GAGTACACGGACGCCCTCG 62.393 68.421 0.00 0.00 42.43 4.63
88 89 3.108343 CGCCCTCGTAGATGTCGT 58.892 61.111 0.00 0.00 33.89 4.34
89 90 1.009900 CGCCCTCGTAGATGTCGTC 60.010 63.158 0.00 0.00 33.89 4.20
90 91 1.009900 GCCCTCGTAGATGTCGTCG 60.010 63.158 0.00 0.00 33.89 5.12
91 92 1.009900 CCCTCGTAGATGTCGTCGC 60.010 63.158 0.00 0.00 33.89 5.19
92 93 1.437772 CCCTCGTAGATGTCGTCGCT 61.438 60.000 0.00 0.00 33.89 4.93
93 94 1.215244 CCTCGTAGATGTCGTCGCTA 58.785 55.000 0.00 0.00 33.89 4.26
94 95 1.596260 CCTCGTAGATGTCGTCGCTAA 59.404 52.381 0.00 0.00 33.89 3.09
95 96 2.348685 CCTCGTAGATGTCGTCGCTAAG 60.349 54.545 0.00 0.00 33.89 2.18
96 97 2.274437 TCGTAGATGTCGTCGCTAAGT 58.726 47.619 0.00 0.00 0.00 2.24
97 98 2.674852 TCGTAGATGTCGTCGCTAAGTT 59.325 45.455 0.00 0.00 0.00 2.66
98 99 3.027710 CGTAGATGTCGTCGCTAAGTTC 58.972 50.000 0.00 0.00 0.00 3.01
99 100 2.563471 AGATGTCGTCGCTAAGTTCC 57.437 50.000 0.00 0.00 0.00 3.62
100 101 1.134560 AGATGTCGTCGCTAAGTTCCC 59.865 52.381 0.00 0.00 0.00 3.97
101 102 1.134560 GATGTCGTCGCTAAGTTCCCT 59.865 52.381 0.00 0.00 0.00 4.20
102 103 0.242825 TGTCGTCGCTAAGTTCCCTG 59.757 55.000 0.00 0.00 0.00 4.45
103 104 0.243095 GTCGTCGCTAAGTTCCCTGT 59.757 55.000 0.00 0.00 0.00 4.00
104 105 0.524862 TCGTCGCTAAGTTCCCTGTC 59.475 55.000 0.00 0.00 0.00 3.51
105 106 0.526662 CGTCGCTAAGTTCCCTGTCT 59.473 55.000 0.00 0.00 0.00 3.41
106 107 1.467713 CGTCGCTAAGTTCCCTGTCTC 60.468 57.143 0.00 0.00 0.00 3.36
107 108 1.819903 GTCGCTAAGTTCCCTGTCTCT 59.180 52.381 0.00 0.00 0.00 3.10
108 109 2.093106 TCGCTAAGTTCCCTGTCTCTC 58.907 52.381 0.00 0.00 0.00 3.20
109 110 1.819288 CGCTAAGTTCCCTGTCTCTCA 59.181 52.381 0.00 0.00 0.00 3.27
110 111 2.416162 CGCTAAGTTCCCTGTCTCTCAC 60.416 54.545 0.00 0.00 0.00 3.51
111 112 2.093921 GCTAAGTTCCCTGTCTCTCACC 60.094 54.545 0.00 0.00 0.00 4.02
112 113 0.969894 AAGTTCCCTGTCTCTCACCG 59.030 55.000 0.00 0.00 0.00 4.94
113 114 1.079750 GTTCCCTGTCTCTCACCGC 60.080 63.158 0.00 0.00 0.00 5.68
114 115 2.283529 TTCCCTGTCTCTCACCGCC 61.284 63.158 0.00 0.00 0.00 6.13
115 116 2.997315 CCCTGTCTCTCACCGCCA 60.997 66.667 0.00 0.00 0.00 5.69
116 117 2.575993 CCTGTCTCTCACCGCCAG 59.424 66.667 0.00 0.00 0.00 4.85
117 118 2.125753 CTGTCTCTCACCGCCAGC 60.126 66.667 0.00 0.00 0.00 4.85
118 119 2.917227 TGTCTCTCACCGCCAGCA 60.917 61.111 0.00 0.00 0.00 4.41
119 120 2.236223 CTGTCTCTCACCGCCAGCAT 62.236 60.000 0.00 0.00 0.00 3.79
120 121 1.812922 GTCTCTCACCGCCAGCATG 60.813 63.158 0.00 0.00 0.00 4.06
133 134 2.090400 CAGCATGGATGATACCTCGG 57.910 55.000 0.00 0.00 0.00 4.63
134 135 0.322975 AGCATGGATGATACCTCGGC 59.677 55.000 0.00 0.00 0.00 5.54
135 136 1.016130 GCATGGATGATACCTCGGCG 61.016 60.000 0.00 0.00 0.00 6.46
136 137 0.390340 CATGGATGATACCTCGGCGG 60.390 60.000 7.21 0.00 39.35 6.13
137 138 0.541998 ATGGATGATACCTCGGCGGA 60.542 55.000 7.21 0.00 36.31 5.54
138 139 1.179174 TGGATGATACCTCGGCGGAG 61.179 60.000 14.06 14.06 40.14 4.63
139 140 1.179814 GGATGATACCTCGGCGGAGT 61.180 60.000 18.79 7.56 38.70 3.85
140 141 0.674534 GATGATACCTCGGCGGAGTT 59.325 55.000 18.79 8.49 38.70 3.01
141 142 1.068741 GATGATACCTCGGCGGAGTTT 59.931 52.381 18.79 8.81 38.70 2.66
142 143 0.174845 TGATACCTCGGCGGAGTTTG 59.825 55.000 18.79 7.39 38.70 2.93
143 144 0.175073 GATACCTCGGCGGAGTTTGT 59.825 55.000 18.79 12.37 38.70 2.83
144 145 0.175073 ATACCTCGGCGGAGTTTGTC 59.825 55.000 18.79 0.00 38.70 3.18
145 146 2.203972 TACCTCGGCGGAGTTTGTCG 62.204 60.000 18.79 6.06 38.70 4.35
146 147 2.809601 CTCGGCGGAGTTTGTCGG 60.810 66.667 12.89 0.00 35.48 4.79
147 148 4.367023 TCGGCGGAGTTTGTCGGG 62.367 66.667 7.21 0.00 0.00 5.14
149 150 4.324991 GGCGGAGTTTGTCGGGGT 62.325 66.667 0.00 0.00 0.00 4.95
150 151 2.741211 GCGGAGTTTGTCGGGGTC 60.741 66.667 0.00 0.00 0.00 4.46
151 152 2.738480 CGGAGTTTGTCGGGGTCA 59.262 61.111 0.00 0.00 0.00 4.02
152 153 1.295423 CGGAGTTTGTCGGGGTCAT 59.705 57.895 0.00 0.00 0.00 3.06
153 154 1.019278 CGGAGTTTGTCGGGGTCATG 61.019 60.000 0.00 0.00 0.00 3.07
154 155 0.036306 GGAGTTTGTCGGGGTCATGT 59.964 55.000 0.00 0.00 0.00 3.21
155 156 1.439679 GAGTTTGTCGGGGTCATGTC 58.560 55.000 0.00 0.00 0.00 3.06
156 157 0.036306 AGTTTGTCGGGGTCATGTCC 59.964 55.000 0.00 0.00 0.00 4.02
157 158 0.250553 GTTTGTCGGGGTCATGTCCA 60.251 55.000 11.23 0.00 0.00 4.02
158 159 0.695924 TTTGTCGGGGTCATGTCCAT 59.304 50.000 11.23 0.00 0.00 3.41
159 160 0.035534 TTGTCGGGGTCATGTCCATG 60.036 55.000 11.23 0.71 40.09 3.66
160 161 1.153168 GTCGGGGTCATGTCCATGG 60.153 63.158 4.97 4.97 39.24 3.66
161 162 2.192979 CGGGGTCATGTCCATGGG 59.807 66.667 13.02 0.00 39.24 4.00
162 163 2.374525 CGGGGTCATGTCCATGGGA 61.375 63.158 13.02 0.00 39.24 4.37
163 164 1.533711 GGGGTCATGTCCATGGGAG 59.466 63.158 13.02 0.00 39.24 4.30
164 165 1.281925 GGGGTCATGTCCATGGGAGT 61.282 60.000 13.02 0.00 39.24 3.85
165 166 0.625849 GGGTCATGTCCATGGGAGTT 59.374 55.000 13.02 0.00 39.24 3.01
166 167 1.843851 GGGTCATGTCCATGGGAGTTA 59.156 52.381 13.02 0.00 39.24 2.24
167 168 2.158755 GGGTCATGTCCATGGGAGTTAG 60.159 54.545 13.02 0.00 39.24 2.34
168 169 2.505819 GGTCATGTCCATGGGAGTTAGT 59.494 50.000 13.02 0.00 39.24 2.24
169 170 3.054361 GGTCATGTCCATGGGAGTTAGTT 60.054 47.826 13.02 0.00 39.24 2.24
170 171 3.941483 GTCATGTCCATGGGAGTTAGTTG 59.059 47.826 13.02 0.00 39.24 3.16
171 172 2.489938 TGTCCATGGGAGTTAGTTGC 57.510 50.000 13.02 0.00 29.39 4.17
172 173 1.702401 TGTCCATGGGAGTTAGTTGCA 59.298 47.619 13.02 0.00 29.39 4.08
173 174 2.107378 TGTCCATGGGAGTTAGTTGCAA 59.893 45.455 13.02 0.00 29.39 4.08
174 175 2.749621 GTCCATGGGAGTTAGTTGCAAG 59.250 50.000 13.02 0.00 29.39 4.01
175 176 2.094675 CCATGGGAGTTAGTTGCAAGG 58.905 52.381 2.85 0.00 0.00 3.61
176 177 2.555227 CCATGGGAGTTAGTTGCAAGGT 60.555 50.000 2.85 0.00 0.00 3.50
177 178 2.270352 TGGGAGTTAGTTGCAAGGTG 57.730 50.000 0.00 0.00 0.00 4.00
178 179 1.202879 TGGGAGTTAGTTGCAAGGTGG 60.203 52.381 0.00 0.00 0.00 4.61
179 180 1.073284 GGGAGTTAGTTGCAAGGTGGA 59.927 52.381 0.00 0.00 0.00 4.02
180 181 2.427506 GGAGTTAGTTGCAAGGTGGAG 58.572 52.381 0.00 0.00 0.00 3.86
181 182 2.038557 GGAGTTAGTTGCAAGGTGGAGA 59.961 50.000 0.00 0.00 0.00 3.71
182 183 3.496160 GGAGTTAGTTGCAAGGTGGAGAA 60.496 47.826 0.00 0.00 0.00 2.87
183 184 3.477530 AGTTAGTTGCAAGGTGGAGAAC 58.522 45.455 0.00 0.00 0.00 3.01
184 185 2.163818 TAGTTGCAAGGTGGAGAACG 57.836 50.000 0.00 0.00 0.00 3.95
185 186 0.180406 AGTTGCAAGGTGGAGAACGT 59.820 50.000 0.00 0.00 0.00 3.99
186 187 0.586802 GTTGCAAGGTGGAGAACGTC 59.413 55.000 0.00 0.00 0.00 4.34
187 188 0.878523 TTGCAAGGTGGAGAACGTCG 60.879 55.000 0.00 0.00 0.00 5.12
188 189 1.300697 GCAAGGTGGAGAACGTCGT 60.301 57.895 0.00 0.00 0.00 4.34
189 190 1.282930 GCAAGGTGGAGAACGTCGTC 61.283 60.000 0.00 0.00 0.00 4.20
190 191 0.314302 CAAGGTGGAGAACGTCGTCT 59.686 55.000 0.00 0.00 0.00 4.18
191 192 1.538512 CAAGGTGGAGAACGTCGTCTA 59.461 52.381 0.00 0.00 0.00 2.59
192 193 1.451067 AGGTGGAGAACGTCGTCTAG 58.549 55.000 0.00 0.00 0.00 2.43
193 194 1.163554 GGTGGAGAACGTCGTCTAGT 58.836 55.000 0.00 0.00 0.00 2.57
194 195 1.135746 GGTGGAGAACGTCGTCTAGTG 60.136 57.143 0.00 0.00 0.00 2.74
195 196 1.135746 GTGGAGAACGTCGTCTAGTGG 60.136 57.143 0.00 0.00 0.00 4.00
196 197 1.271001 TGGAGAACGTCGTCTAGTGGA 60.271 52.381 0.00 0.00 0.00 4.02
197 198 1.808945 GGAGAACGTCGTCTAGTGGAA 59.191 52.381 0.00 0.00 0.00 3.53
198 199 2.159544 GGAGAACGTCGTCTAGTGGAAG 60.160 54.545 0.00 0.00 0.00 3.46
199 200 1.199558 AGAACGTCGTCTAGTGGAAGC 59.800 52.381 0.00 0.00 0.00 3.86
200 201 0.109873 AACGTCGTCTAGTGGAAGCG 60.110 55.000 0.00 5.24 32.90 4.68
201 202 1.226323 CGTCGTCTAGTGGAAGCGG 60.226 63.158 0.00 0.00 0.00 5.52
202 203 1.881602 GTCGTCTAGTGGAAGCGGT 59.118 57.895 0.00 0.00 0.00 5.68
203 204 0.456312 GTCGTCTAGTGGAAGCGGTG 60.456 60.000 0.00 0.00 0.00 4.94
204 205 1.805945 CGTCTAGTGGAAGCGGTGC 60.806 63.158 0.00 0.00 0.00 5.01
205 206 1.805945 GTCTAGTGGAAGCGGTGCG 60.806 63.158 0.00 0.00 0.00 5.34
231 232 4.233408 CGCAAAGCAGGAAGTTGC 57.767 55.556 0.00 0.00 43.32 4.17
232 233 1.359833 CGCAAAGCAGGAAGTTGCA 59.640 52.632 8.19 0.00 46.32 4.08
233 234 0.662374 CGCAAAGCAGGAAGTTGCAG 60.662 55.000 8.19 0.00 46.32 4.41
234 235 0.319297 GCAAAGCAGGAAGTTGCAGG 60.319 55.000 0.00 0.00 46.47 4.85
235 236 0.319297 CAAAGCAGGAAGTTGCAGGC 60.319 55.000 0.00 0.00 46.47 4.85
236 237 1.466851 AAAGCAGGAAGTTGCAGGCC 61.467 55.000 0.00 0.00 46.47 5.19
237 238 2.598394 GCAGGAAGTTGCAGGCCA 60.598 61.111 5.01 0.00 43.53 5.36
238 239 2.633509 GCAGGAAGTTGCAGGCCAG 61.634 63.158 5.01 0.00 43.53 4.85
239 240 1.975407 CAGGAAGTTGCAGGCCAGG 60.975 63.158 5.01 0.00 0.00 4.45
240 241 2.156098 AGGAAGTTGCAGGCCAGGA 61.156 57.895 5.01 0.00 0.00 3.86
241 242 1.676967 GGAAGTTGCAGGCCAGGAG 60.677 63.158 5.01 0.00 0.00 3.69
242 243 1.676967 GAAGTTGCAGGCCAGGAGG 60.677 63.158 5.01 0.00 38.23 4.30
243 244 2.417558 GAAGTTGCAGGCCAGGAGGT 62.418 60.000 5.01 0.00 37.19 3.85
244 245 2.360475 GTTGCAGGCCAGGAGGTC 60.360 66.667 5.01 0.00 40.92 3.85
245 246 4.020617 TTGCAGGCCAGGAGGTCG 62.021 66.667 5.01 0.00 46.92 4.79
250 251 3.851128 GGCCAGGAGGTCGCCTAC 61.851 72.222 0.00 0.21 39.70 3.18
251 252 3.075005 GCCAGGAGGTCGCCTACA 61.075 66.667 10.26 0.00 36.80 2.74
252 253 2.435693 GCCAGGAGGTCGCCTACAT 61.436 63.158 10.26 0.00 36.80 2.29
253 254 1.742768 CCAGGAGGTCGCCTACATC 59.257 63.158 10.26 0.00 36.80 3.06
254 255 1.360551 CAGGAGGTCGCCTACATCG 59.639 63.158 10.26 0.00 39.85 3.84
255 256 1.101635 CAGGAGGTCGCCTACATCGA 61.102 60.000 10.26 0.00 39.85 3.59
256 257 0.395311 AGGAGGTCGCCTACATCGAA 60.395 55.000 10.26 0.00 39.85 3.71
257 258 0.030908 GGAGGTCGCCTACATCGAAG 59.969 60.000 3.51 0.00 39.85 3.79
258 259 0.739561 GAGGTCGCCTACATCGAAGT 59.260 55.000 0.00 0.00 37.73 3.01
259 260 0.456221 AGGTCGCCTACATCGAAGTG 59.544 55.000 3.02 0.00 37.73 3.16
260 261 0.527817 GGTCGCCTACATCGAAGTGG 60.528 60.000 3.02 0.00 37.73 4.00
261 262 1.141019 TCGCCTACATCGAAGTGGC 59.859 57.895 18.27 18.27 40.14 5.01
262 263 1.141881 CGCCTACATCGAAGTGGCT 59.858 57.895 22.57 0.00 41.25 4.75
263 264 0.460284 CGCCTACATCGAAGTGGCTT 60.460 55.000 22.57 0.00 41.25 4.35
264 265 1.009829 GCCTACATCGAAGTGGCTTG 58.990 55.000 19.91 3.28 40.36 4.01
265 266 1.405526 GCCTACATCGAAGTGGCTTGA 60.406 52.381 19.91 0.00 40.36 3.02
266 267 2.544685 CCTACATCGAAGTGGCTTGAG 58.455 52.381 3.02 0.00 0.00 3.02
267 268 2.544685 CTACATCGAAGTGGCTTGAGG 58.455 52.381 3.02 0.00 0.00 3.86
268 269 0.674895 ACATCGAAGTGGCTTGAGGC 60.675 55.000 0.00 0.00 41.50 4.70
269 270 1.448540 ATCGAAGTGGCTTGAGGCG 60.449 57.895 0.00 0.00 44.42 5.52
270 271 1.888436 ATCGAAGTGGCTTGAGGCGA 61.888 55.000 0.00 0.00 44.42 5.54
271 272 1.667830 CGAAGTGGCTTGAGGCGAA 60.668 57.895 0.00 0.00 44.42 4.70
272 273 1.630244 CGAAGTGGCTTGAGGCGAAG 61.630 60.000 0.00 0.00 44.42 3.79
273 274 0.320771 GAAGTGGCTTGAGGCGAAGA 60.321 55.000 3.77 0.00 44.42 2.87
274 275 0.108585 AAGTGGCTTGAGGCGAAGAA 59.891 50.000 3.77 0.00 44.42 2.52
275 276 0.108585 AGTGGCTTGAGGCGAAGAAA 59.891 50.000 3.77 0.00 44.42 2.52
276 277 0.951558 GTGGCTTGAGGCGAAGAAAA 59.048 50.000 3.77 0.00 44.42 2.29
277 278 1.336755 GTGGCTTGAGGCGAAGAAAAA 59.663 47.619 3.77 0.00 44.42 1.94
278 279 1.608590 TGGCTTGAGGCGAAGAAAAAG 59.391 47.619 3.77 0.00 44.42 2.27
279 280 1.068264 GGCTTGAGGCGAAGAAAAAGG 60.068 52.381 3.77 0.00 42.94 3.11
280 281 1.880027 GCTTGAGGCGAAGAAAAAGGA 59.120 47.619 3.77 0.00 0.00 3.36
281 282 2.095516 GCTTGAGGCGAAGAAAAAGGAG 60.096 50.000 3.77 0.00 0.00 3.69
282 283 3.403038 CTTGAGGCGAAGAAAAAGGAGA 58.597 45.455 0.00 0.00 0.00 3.71
283 284 3.703001 TGAGGCGAAGAAAAAGGAGAT 57.297 42.857 0.00 0.00 0.00 2.75
284 285 3.600388 TGAGGCGAAGAAAAAGGAGATC 58.400 45.455 0.00 0.00 0.00 2.75
285 286 3.007940 TGAGGCGAAGAAAAAGGAGATCA 59.992 43.478 0.00 0.00 0.00 2.92
286 287 4.003648 GAGGCGAAGAAAAAGGAGATCAA 58.996 43.478 0.00 0.00 0.00 2.57
287 288 3.753797 AGGCGAAGAAAAAGGAGATCAAC 59.246 43.478 0.00 0.00 0.00 3.18
288 289 3.424962 GGCGAAGAAAAAGGAGATCAACG 60.425 47.826 0.00 0.00 0.00 4.10
289 290 3.737305 CGAAGAAAAAGGAGATCAACGC 58.263 45.455 0.00 0.00 0.00 4.84
290 291 3.186409 CGAAGAAAAAGGAGATCAACGCA 59.814 43.478 0.00 0.00 0.00 5.24
291 292 4.467735 GAAGAAAAAGGAGATCAACGCAC 58.532 43.478 0.00 0.00 0.00 5.34
292 293 2.480419 AGAAAAAGGAGATCAACGCACG 59.520 45.455 0.00 0.00 0.00 5.34
293 294 0.517316 AAAAGGAGATCAACGCACGC 59.483 50.000 0.00 0.00 0.00 5.34
294 295 1.626654 AAAGGAGATCAACGCACGCG 61.627 55.000 10.36 10.36 46.03 6.01
295 296 2.486636 AAGGAGATCAACGCACGCGA 62.487 55.000 19.66 0.00 42.83 5.87
296 297 2.092291 GGAGATCAACGCACGCGAA 61.092 57.895 19.66 3.42 42.83 4.70
297 298 1.623081 GGAGATCAACGCACGCGAAA 61.623 55.000 19.66 3.04 42.83 3.46
298 299 0.162933 GAGATCAACGCACGCGAAAA 59.837 50.000 19.66 2.67 42.83 2.29
299 300 0.163788 AGATCAACGCACGCGAAAAG 59.836 50.000 19.66 3.31 42.83 2.27
300 301 0.162933 GATCAACGCACGCGAAAAGA 59.837 50.000 19.66 9.95 42.83 2.52
301 302 0.163788 ATCAACGCACGCGAAAAGAG 59.836 50.000 19.66 3.84 42.83 2.85
302 303 0.872451 TCAACGCACGCGAAAAGAGA 60.872 50.000 19.66 0.33 42.83 3.10
303 304 0.449507 CAACGCACGCGAAAAGAGAG 60.450 55.000 19.66 0.00 42.83 3.20
304 305 0.874607 AACGCACGCGAAAAGAGAGT 60.875 50.000 19.66 0.00 42.83 3.24
305 306 1.128611 CGCACGCGAAAAGAGAGTG 59.871 57.895 15.93 0.00 42.83 3.51
306 307 1.548973 CGCACGCGAAAAGAGAGTGT 61.549 55.000 15.93 0.00 42.83 3.55
307 308 0.111089 GCACGCGAAAAGAGAGTGTG 60.111 55.000 15.93 0.00 45.82 3.82
308 309 0.508641 CACGCGAAAAGAGAGTGTGG 59.491 55.000 15.93 0.00 41.20 4.17
309 310 1.222115 ACGCGAAAAGAGAGTGTGGC 61.222 55.000 15.93 0.00 0.00 5.01
310 311 1.869690 GCGAAAAGAGAGTGTGGCC 59.130 57.895 0.00 0.00 0.00 5.36
311 312 1.901650 GCGAAAAGAGAGTGTGGCCG 61.902 60.000 0.00 0.00 0.00 6.13
312 313 1.869690 GAAAAGAGAGTGTGGCCGC 59.130 57.895 10.11 10.11 0.00 6.53
313 314 0.884704 GAAAAGAGAGTGTGGCCGCA 60.885 55.000 16.89 16.89 0.00 5.69
314 315 0.886490 AAAAGAGAGTGTGGCCGCAG 60.886 55.000 21.93 0.00 0.00 5.18
315 316 2.044806 AAAGAGAGTGTGGCCGCAGT 62.045 55.000 26.61 26.61 0.00 4.40
316 317 2.433318 GAGAGTGTGGCCGCAGTC 60.433 66.667 36.70 36.70 38.69 3.51
317 318 4.363990 AGAGTGTGGCCGCAGTCG 62.364 66.667 36.56 0.00 42.10 4.18
344 345 2.202440 CCACGAGCGTCGAACGAT 60.202 61.111 15.83 4.90 45.73 3.73
345 346 1.800315 CCACGAGCGTCGAACGATT 60.800 57.895 15.83 0.00 41.80 3.34
346 347 1.619207 CACGAGCGTCGAACGATTC 59.381 57.895 15.83 6.84 41.80 2.52
347 348 1.063412 CACGAGCGTCGAACGATTCA 61.063 55.000 15.83 0.00 41.80 2.57
348 349 0.179171 ACGAGCGTCGAACGATTCAT 60.179 50.000 15.83 0.00 41.80 2.57
349 350 0.914551 CGAGCGTCGAACGATTCATT 59.085 50.000 10.82 0.00 41.80 2.57
350 351 2.106418 CGAGCGTCGAACGATTCATTA 58.894 47.619 10.82 0.00 41.80 1.90
351 352 2.719556 CGAGCGTCGAACGATTCATTAT 59.280 45.455 10.82 0.00 41.80 1.28
352 353 3.181562 CGAGCGTCGAACGATTCATTATC 60.182 47.826 10.82 0.00 41.80 1.75
395 396 9.683870 AATTATTGTATTCCATTTTTGGCATGT 57.316 25.926 0.00 0.00 0.00 3.21
396 397 6.988622 ATTGTATTCCATTTTTGGCATGTG 57.011 33.333 0.00 0.00 0.00 3.21
397 398 5.480642 TGTATTCCATTTTTGGCATGTGT 57.519 34.783 0.00 0.00 0.00 3.72
398 399 5.862845 TGTATTCCATTTTTGGCATGTGTT 58.137 33.333 0.00 0.00 0.00 3.32
399 400 5.699915 TGTATTCCATTTTTGGCATGTGTTG 59.300 36.000 0.00 0.00 0.00 3.33
400 401 4.412796 TTCCATTTTTGGCATGTGTTGA 57.587 36.364 0.00 0.00 0.00 3.18
401 402 4.412796 TCCATTTTTGGCATGTGTTGAA 57.587 36.364 0.00 0.00 0.00 2.69
402 403 4.970711 TCCATTTTTGGCATGTGTTGAAT 58.029 34.783 0.00 0.00 0.00 2.57
403 404 5.374921 TCCATTTTTGGCATGTGTTGAATT 58.625 33.333 0.00 0.00 0.00 2.17
404 405 6.528321 TCCATTTTTGGCATGTGTTGAATTA 58.472 32.000 0.00 0.00 0.00 1.40
405 406 7.166851 TCCATTTTTGGCATGTGTTGAATTAT 58.833 30.769 0.00 0.00 0.00 1.28
406 407 7.664731 TCCATTTTTGGCATGTGTTGAATTATT 59.335 29.630 0.00 0.00 0.00 1.40
407 408 7.751348 CCATTTTTGGCATGTGTTGAATTATTG 59.249 33.333 0.00 0.00 0.00 1.90
408 409 8.504815 CATTTTTGGCATGTGTTGAATTATTGA 58.495 29.630 0.00 0.00 0.00 2.57
409 410 8.442632 TTTTTGGCATGTGTTGAATTATTGAA 57.557 26.923 0.00 0.00 0.00 2.69
410 411 8.618702 TTTTGGCATGTGTTGAATTATTGAAT 57.381 26.923 0.00 0.00 0.00 2.57
411 412 8.618702 TTTGGCATGTGTTGAATTATTGAATT 57.381 26.923 0.00 0.00 38.00 2.17
412 413 7.598189 TGGCATGTGTTGAATTATTGAATTG 57.402 32.000 0.00 0.00 35.33 2.32
413 414 7.160049 TGGCATGTGTTGAATTATTGAATTGT 58.840 30.769 0.00 0.00 35.33 2.71
414 415 7.117956 TGGCATGTGTTGAATTATTGAATTGTG 59.882 33.333 0.00 0.00 35.33 3.33
415 416 7.118101 GGCATGTGTTGAATTATTGAATTGTGT 59.882 33.333 0.00 0.00 35.33 3.72
416 417 8.497554 GCATGTGTTGAATTATTGAATTGTGTT 58.502 29.630 0.00 0.00 35.33 3.32
439 440 2.288961 TTTTTGGTTGCGCCGTTAAA 57.711 40.000 4.18 0.00 41.21 1.52
440 441 2.510768 TTTTGGTTGCGCCGTTAAAT 57.489 40.000 4.18 0.00 41.21 1.40
441 442 2.510768 TTTGGTTGCGCCGTTAAATT 57.489 40.000 4.18 0.00 41.21 1.82
442 443 3.637998 TTTGGTTGCGCCGTTAAATTA 57.362 38.095 4.18 0.00 41.21 1.40
443 444 3.637998 TTGGTTGCGCCGTTAAATTAA 57.362 38.095 4.18 0.00 41.21 1.40
444 445 3.851976 TGGTTGCGCCGTTAAATTAAT 57.148 38.095 4.18 0.00 41.21 1.40
445 446 3.502920 TGGTTGCGCCGTTAAATTAATG 58.497 40.909 4.18 0.00 41.21 1.90
446 447 3.190744 TGGTTGCGCCGTTAAATTAATGA 59.809 39.130 4.18 0.00 41.21 2.57
447 448 4.142359 TGGTTGCGCCGTTAAATTAATGAT 60.142 37.500 4.18 0.00 41.21 2.45
448 449 4.206200 GGTTGCGCCGTTAAATTAATGATG 59.794 41.667 4.18 0.46 0.00 3.07
449 450 4.884458 TGCGCCGTTAAATTAATGATGA 57.116 36.364 4.18 0.00 0.00 2.92
450 451 5.236655 TGCGCCGTTAAATTAATGATGAA 57.763 34.783 4.18 0.00 0.00 2.57
451 452 5.826586 TGCGCCGTTAAATTAATGATGAAT 58.173 33.333 4.18 0.00 0.00 2.57
452 453 6.269315 TGCGCCGTTAAATTAATGATGAATT 58.731 32.000 4.18 0.00 0.00 2.17
453 454 6.416455 TGCGCCGTTAAATTAATGATGAATTC 59.584 34.615 4.18 0.00 0.00 2.17
454 455 6.416455 GCGCCGTTAAATTAATGATGAATTCA 59.584 34.615 11.26 11.26 39.12 2.57
456 457 8.419435 CGCCGTTAAATTAATGATGAATTCATG 58.581 33.333 25.37 6.93 44.51 3.07
457 458 8.216453 GCCGTTAAATTAATGATGAATTCATGC 58.784 33.333 25.37 16.09 44.51 4.06
458 459 9.467258 CCGTTAAATTAATGATGAATTCATGCT 57.533 29.630 25.37 11.40 44.51 3.79
468 469 9.695155 AATGATGAATTCATGCTATATGATGGA 57.305 29.630 25.37 0.00 44.51 3.41
469 470 8.502105 TGATGAATTCATGCTATATGATGGAC 57.498 34.615 25.37 6.39 36.57 4.02
470 471 6.973229 TGAATTCATGCTATATGATGGACG 57.027 37.500 3.38 0.00 0.00 4.79
471 472 5.876460 TGAATTCATGCTATATGATGGACGG 59.124 40.000 3.38 0.00 0.00 4.79
472 473 3.893326 TCATGCTATATGATGGACGGG 57.107 47.619 0.00 0.00 0.00 5.28
473 474 2.093500 TCATGCTATATGATGGACGGGC 60.093 50.000 0.00 0.00 0.00 6.13
474 475 1.347062 TGCTATATGATGGACGGGCA 58.653 50.000 0.00 0.00 0.00 5.36
475 476 1.908619 TGCTATATGATGGACGGGCAT 59.091 47.619 0.00 0.00 0.00 4.40
476 477 2.283298 GCTATATGATGGACGGGCATG 58.717 52.381 0.00 0.00 0.00 4.06
477 478 2.093500 GCTATATGATGGACGGGCATGA 60.093 50.000 0.00 0.00 0.00 3.07
478 479 3.619733 GCTATATGATGGACGGGCATGAA 60.620 47.826 0.00 0.00 0.00 2.57
479 480 3.507162 ATATGATGGACGGGCATGAAA 57.493 42.857 0.00 0.00 0.00 2.69
480 481 2.369983 ATGATGGACGGGCATGAAAT 57.630 45.000 0.00 0.00 0.00 2.17
481 482 2.142356 TGATGGACGGGCATGAAATT 57.858 45.000 0.00 0.00 0.00 1.82
482 483 1.750206 TGATGGACGGGCATGAAATTG 59.250 47.619 0.00 0.00 0.00 2.32
483 484 0.461135 ATGGACGGGCATGAAATTGC 59.539 50.000 0.00 0.00 42.01 3.56
484 485 0.897401 TGGACGGGCATGAAATTGCA 60.897 50.000 0.00 0.00 44.59 4.08
485 486 0.461135 GGACGGGCATGAAATTGCAT 59.539 50.000 0.00 0.00 44.59 3.96
486 487 1.563111 GACGGGCATGAAATTGCATG 58.437 50.000 20.58 20.58 46.48 4.06
487 488 0.176219 ACGGGCATGAAATTGCATGG 59.824 50.000 24.89 12.77 44.47 3.66
488 489 0.460722 CGGGCATGAAATTGCATGGA 59.539 50.000 24.89 0.00 44.47 3.41
489 490 1.069513 CGGGCATGAAATTGCATGGAT 59.930 47.619 24.89 0.00 44.47 3.41
490 491 2.484065 CGGGCATGAAATTGCATGGATT 60.484 45.455 24.89 0.00 44.47 3.01
491 492 3.135994 GGGCATGAAATTGCATGGATTC 58.864 45.455 24.89 10.21 44.47 2.52
492 493 2.798283 GGCATGAAATTGCATGGATTCG 59.202 45.455 24.89 2.02 44.47 3.34
493 494 3.491276 GGCATGAAATTGCATGGATTCGA 60.491 43.478 24.89 0.00 44.47 3.71
494 495 3.734231 GCATGAAATTGCATGGATTCGAG 59.266 43.478 24.89 0.62 44.47 4.04
495 496 4.498513 GCATGAAATTGCATGGATTCGAGA 60.499 41.667 24.89 0.00 44.47 4.04
496 497 4.888038 TGAAATTGCATGGATTCGAGAG 57.112 40.909 0.00 0.00 0.00 3.20
497 498 4.264253 TGAAATTGCATGGATTCGAGAGT 58.736 39.130 0.00 0.00 0.00 3.24
498 499 4.333649 TGAAATTGCATGGATTCGAGAGTC 59.666 41.667 0.00 0.00 0.00 3.36
499 500 3.834489 ATTGCATGGATTCGAGAGTCT 57.166 42.857 0.00 0.00 0.00 3.24
500 501 2.591571 TGCATGGATTCGAGAGTCTG 57.408 50.000 0.00 0.00 0.00 3.51
501 502 1.137675 TGCATGGATTCGAGAGTCTGG 59.862 52.381 0.00 0.00 0.00 3.86
502 503 1.410517 GCATGGATTCGAGAGTCTGGA 59.589 52.381 0.00 0.00 0.00 3.86
503 504 2.036992 GCATGGATTCGAGAGTCTGGAT 59.963 50.000 5.62 0.00 0.00 3.41
504 505 3.256879 GCATGGATTCGAGAGTCTGGATA 59.743 47.826 5.62 0.00 0.00 2.59
505 506 4.081752 GCATGGATTCGAGAGTCTGGATAT 60.082 45.833 5.62 3.14 0.00 1.63
506 507 5.126222 GCATGGATTCGAGAGTCTGGATATA 59.874 44.000 5.62 0.00 0.00 0.86
507 508 6.183360 GCATGGATTCGAGAGTCTGGATATAT 60.183 42.308 5.62 0.00 0.00 0.86
508 509 6.765915 TGGATTCGAGAGTCTGGATATATG 57.234 41.667 5.62 0.00 0.00 1.78
509 510 6.485171 TGGATTCGAGAGTCTGGATATATGA 58.515 40.000 5.62 0.00 0.00 2.15
510 511 6.601217 TGGATTCGAGAGTCTGGATATATGAG 59.399 42.308 5.62 0.00 0.00 2.90
511 512 6.826231 GGATTCGAGAGTCTGGATATATGAGA 59.174 42.308 5.62 0.00 0.00 3.27
512 513 7.012327 GGATTCGAGAGTCTGGATATATGAGAG 59.988 44.444 5.62 0.00 0.00 3.20
513 514 5.739959 TCGAGAGTCTGGATATATGAGAGG 58.260 45.833 0.00 0.00 0.00 3.69
514 515 5.249622 TCGAGAGTCTGGATATATGAGAGGT 59.750 44.000 0.00 0.00 0.00 3.85
515 516 5.353956 CGAGAGTCTGGATATATGAGAGGTG 59.646 48.000 0.00 0.00 0.00 4.00
516 517 6.212840 AGAGTCTGGATATATGAGAGGTGT 57.787 41.667 0.00 0.00 0.00 4.16
517 518 6.009589 AGAGTCTGGATATATGAGAGGTGTG 58.990 44.000 0.00 0.00 0.00 3.82
518 519 5.083122 AGTCTGGATATATGAGAGGTGTGG 58.917 45.833 0.00 0.00 0.00 4.17
519 520 4.835615 GTCTGGATATATGAGAGGTGTGGT 59.164 45.833 0.00 0.00 0.00 4.16
520 521 5.305644 GTCTGGATATATGAGAGGTGTGGTT 59.694 44.000 0.00 0.00 0.00 3.67
521 522 5.305386 TCTGGATATATGAGAGGTGTGGTTG 59.695 44.000 0.00 0.00 0.00 3.77
522 523 4.968719 TGGATATATGAGAGGTGTGGTTGT 59.031 41.667 0.00 0.00 0.00 3.32
523 524 5.070446 TGGATATATGAGAGGTGTGGTTGTC 59.930 44.000 0.00 0.00 0.00 3.18
524 525 3.914426 ATATGAGAGGTGTGGTTGTCC 57.086 47.619 0.00 0.00 0.00 4.02
525 526 0.321671 ATGAGAGGTGTGGTTGTCCG 59.678 55.000 0.00 0.00 36.30 4.79
526 527 0.757561 TGAGAGGTGTGGTTGTCCGA 60.758 55.000 0.00 0.00 36.30 4.55
527 528 0.038159 GAGAGGTGTGGTTGTCCGAG 60.038 60.000 0.00 0.00 36.30 4.63
528 529 0.469331 AGAGGTGTGGTTGTCCGAGA 60.469 55.000 0.00 0.00 36.30 4.04
529 530 0.038159 GAGGTGTGGTTGTCCGAGAG 60.038 60.000 0.00 0.00 36.30 3.20
542 543 3.768633 CGAGAGGACAAATGAGGGG 57.231 57.895 0.00 0.00 0.00 4.79
543 544 0.179000 CGAGAGGACAAATGAGGGGG 59.821 60.000 0.00 0.00 0.00 5.40
544 545 0.106967 GAGAGGACAAATGAGGGGGC 60.107 60.000 0.00 0.00 0.00 5.80
545 546 1.076705 GAGGACAAATGAGGGGGCC 60.077 63.158 0.00 0.00 0.00 5.80
546 547 1.856873 AGGACAAATGAGGGGGCCA 60.857 57.895 4.39 0.00 0.00 5.36
547 548 1.224003 AGGACAAATGAGGGGGCCAT 61.224 55.000 4.39 0.00 0.00 4.40
548 549 0.325577 GGACAAATGAGGGGGCCATT 60.326 55.000 4.39 0.00 35.92 3.16
549 550 1.114627 GACAAATGAGGGGGCCATTC 58.885 55.000 4.39 2.23 33.51 2.67
550 551 0.413037 ACAAATGAGGGGGCCATTCA 59.587 50.000 4.39 8.92 33.51 2.57
551 552 1.117150 CAAATGAGGGGGCCATTCAG 58.883 55.000 4.39 0.00 33.51 3.02
552 553 0.688749 AAATGAGGGGGCCATTCAGC 60.689 55.000 4.39 0.00 33.51 4.26
553 554 1.877672 AATGAGGGGGCCATTCAGCA 61.878 55.000 4.39 0.00 28.89 4.41
554 555 2.440980 GAGGGGGCCATTCAGCAC 60.441 66.667 4.39 0.00 34.51 4.40
555 556 2.943265 AGGGGGCCATTCAGCACT 60.943 61.111 4.39 0.00 36.04 4.40
556 557 2.757099 GGGGGCCATTCAGCACTG 60.757 66.667 4.39 0.00 36.04 3.66
557 558 2.757099 GGGGCCATTCAGCACTGG 60.757 66.667 4.39 0.00 36.04 4.00
568 569 2.639286 GCACTGGCTTTGGACGTG 59.361 61.111 0.00 0.00 36.96 4.49
569 570 2.186826 GCACTGGCTTTGGACGTGT 61.187 57.895 0.00 0.00 36.96 4.49
570 571 1.941812 CACTGGCTTTGGACGTGTC 59.058 57.895 0.00 0.00 0.00 3.67
579 580 3.646554 GGACGTGTCCGGGAAAAC 58.353 61.111 0.00 0.00 40.36 2.43
580 581 1.227615 GGACGTGTCCGGGAAAACA 60.228 57.895 0.00 0.00 40.36 2.83
581 582 1.501337 GGACGTGTCCGGGAAAACAC 61.501 60.000 12.86 12.86 40.36 3.32
582 583 0.531311 GACGTGTCCGGGAAAACACT 60.531 55.000 18.70 8.55 42.83 3.55
583 584 0.107557 ACGTGTCCGGGAAAACACTT 60.108 50.000 18.70 9.38 42.83 3.16
584 585 0.306533 CGTGTCCGGGAAAACACTTG 59.693 55.000 18.70 4.21 42.83 3.16
585 586 0.030235 GTGTCCGGGAAAACACTTGC 59.970 55.000 15.04 0.00 41.97 4.01
586 587 0.394488 TGTCCGGGAAAACACTTGCA 60.394 50.000 0.00 0.00 0.00 4.08
587 588 0.310854 GTCCGGGAAAACACTTGCAG 59.689 55.000 0.00 0.00 0.00 4.41
588 589 0.181587 TCCGGGAAAACACTTGCAGA 59.818 50.000 0.00 0.00 0.00 4.26
589 590 0.310854 CCGGGAAAACACTTGCAGAC 59.689 55.000 0.00 0.00 0.00 3.51
590 591 0.041312 CGGGAAAACACTTGCAGACG 60.041 55.000 0.00 0.00 0.00 4.18
591 592 1.021968 GGGAAAACACTTGCAGACGT 58.978 50.000 0.00 0.00 0.00 4.34
592 593 1.404035 GGGAAAACACTTGCAGACGTT 59.596 47.619 0.00 0.00 0.00 3.99
593 594 2.159296 GGGAAAACACTTGCAGACGTTT 60.159 45.455 0.00 4.23 33.15 3.60
594 595 3.065648 GGGAAAACACTTGCAGACGTTTA 59.934 43.478 9.10 0.00 31.59 2.01
595 596 4.279659 GGAAAACACTTGCAGACGTTTAG 58.720 43.478 9.10 0.00 31.59 1.85
596 597 3.963383 AAACACTTGCAGACGTTTAGG 57.037 42.857 7.44 0.00 30.11 2.69
597 598 1.878953 ACACTTGCAGACGTTTAGGG 58.121 50.000 0.00 0.00 0.00 3.53
598 599 1.156736 CACTTGCAGACGTTTAGGGG 58.843 55.000 0.00 0.00 0.00 4.79
599 600 0.036306 ACTTGCAGACGTTTAGGGGG 59.964 55.000 0.00 0.00 0.00 5.40
600 601 1.302993 TTGCAGACGTTTAGGGGGC 60.303 57.895 0.00 0.00 0.00 5.80
601 602 1.774894 TTGCAGACGTTTAGGGGGCT 61.775 55.000 0.00 0.00 0.00 5.19
602 603 1.745489 GCAGACGTTTAGGGGGCTG 60.745 63.158 0.00 0.00 0.00 4.85
603 604 1.078426 CAGACGTTTAGGGGGCTGG 60.078 63.158 0.00 0.00 0.00 4.85
604 605 1.229400 AGACGTTTAGGGGGCTGGA 60.229 57.895 0.00 0.00 0.00 3.86
605 606 1.078637 GACGTTTAGGGGGCTGGAC 60.079 63.158 0.00 0.00 0.00 4.02
606 607 1.538135 ACGTTTAGGGGGCTGGACT 60.538 57.895 0.00 0.00 0.00 3.85
607 608 1.078426 CGTTTAGGGGGCTGGACTG 60.078 63.158 0.00 0.00 0.00 3.51
608 609 1.838073 CGTTTAGGGGGCTGGACTGT 61.838 60.000 0.00 0.00 0.00 3.55
609 610 0.035343 GTTTAGGGGGCTGGACTGTC 60.035 60.000 0.00 0.00 0.00 3.51
610 611 1.205460 TTTAGGGGGCTGGACTGTCC 61.205 60.000 19.96 19.96 36.96 4.02
611 612 2.409984 TTAGGGGGCTGGACTGTCCA 62.410 60.000 26.79 26.79 45.98 4.02
625 626 7.265599 TGGACTGTCCAATCCTTTTTATAGA 57.734 36.000 26.54 0.00 45.00 1.98
626 627 7.872138 TGGACTGTCCAATCCTTTTTATAGAT 58.128 34.615 26.54 0.00 45.00 1.98
627 628 7.775093 TGGACTGTCCAATCCTTTTTATAGATG 59.225 37.037 26.54 0.00 45.00 2.90
628 629 7.255277 GGACTGTCCAATCCTTTTTATAGATGC 60.255 40.741 21.70 0.00 36.28 3.91
629 630 7.349598 ACTGTCCAATCCTTTTTATAGATGCT 58.650 34.615 0.00 0.00 0.00 3.79
630 631 7.500559 ACTGTCCAATCCTTTTTATAGATGCTC 59.499 37.037 0.00 0.00 0.00 4.26
631 632 7.577303 TGTCCAATCCTTTTTATAGATGCTCT 58.423 34.615 0.00 0.00 0.00 4.09
632 633 8.713971 TGTCCAATCCTTTTTATAGATGCTCTA 58.286 33.333 0.00 0.00 32.87 2.43
633 634 9.561069 GTCCAATCCTTTTTATAGATGCTCTAA 57.439 33.333 0.00 0.00 31.96 2.10
634 635 9.561069 TCCAATCCTTTTTATAGATGCTCTAAC 57.439 33.333 0.00 0.00 31.96 2.34
635 636 9.342308 CCAATCCTTTTTATAGATGCTCTAACA 57.658 33.333 0.00 0.00 31.96 2.41
650 651 5.344743 CTCTAACATAGAGTTTCCTGGCA 57.655 43.478 6.29 0.00 45.66 4.92
651 652 5.734720 CTCTAACATAGAGTTTCCTGGCAA 58.265 41.667 6.29 0.00 45.66 4.52
652 653 5.488341 TCTAACATAGAGTTTCCTGGCAAC 58.512 41.667 0.60 0.60 41.64 4.17
653 654 4.098914 AACATAGAGTTTCCTGGCAACA 57.901 40.909 11.70 0.00 41.04 3.33
654 655 3.412386 ACATAGAGTTTCCTGGCAACAC 58.588 45.455 11.70 5.33 46.17 3.32
655 656 3.073062 ACATAGAGTTTCCTGGCAACACT 59.927 43.478 12.84 12.84 46.17 3.55
656 657 2.736670 AGAGTTTCCTGGCAACACTT 57.263 45.000 11.70 0.00 46.17 3.16
657 658 3.018423 AGAGTTTCCTGGCAACACTTT 57.982 42.857 11.70 0.00 46.17 2.66
658 659 3.365472 AGAGTTTCCTGGCAACACTTTT 58.635 40.909 11.70 0.00 46.17 2.27
659 660 3.769300 AGAGTTTCCTGGCAACACTTTTT 59.231 39.130 11.70 0.00 46.17 1.94
699 700 9.823647 CTAGAGTTTGATTAGCTTAGGATTTCA 57.176 33.333 0.00 0.00 0.00 2.69
700 701 8.729805 AGAGTTTGATTAGCTTAGGATTTCAG 57.270 34.615 0.00 0.00 0.00 3.02
701 702 8.543774 AGAGTTTGATTAGCTTAGGATTTCAGA 58.456 33.333 0.00 0.00 0.00 3.27
702 703 9.336171 GAGTTTGATTAGCTTAGGATTTCAGAT 57.664 33.333 0.00 0.00 0.00 2.90
703 704 9.692325 AGTTTGATTAGCTTAGGATTTCAGATT 57.308 29.630 0.00 0.00 0.00 2.40
704 705 9.943163 GTTTGATTAGCTTAGGATTTCAGATTC 57.057 33.333 0.00 0.00 0.00 2.52
705 706 9.911788 TTTGATTAGCTTAGGATTTCAGATTCT 57.088 29.630 0.00 0.00 0.00 2.40
706 707 8.899427 TGATTAGCTTAGGATTTCAGATTCTG 57.101 34.615 7.38 7.38 0.00 3.02
707 708 8.708378 TGATTAGCTTAGGATTTCAGATTCTGA 58.292 33.333 12.38 12.38 38.87 3.27
708 709 9.553064 GATTAGCTTAGGATTTCAGATTCTGAA 57.447 33.333 22.26 22.26 46.93 3.02
718 719 4.783959 TCAGATTCTGAATCAAATCGCG 57.216 40.909 27.06 0.00 37.57 5.87
719 720 3.557185 TCAGATTCTGAATCAAATCGCGG 59.443 43.478 27.06 9.76 37.57 6.46
720 721 3.310774 CAGATTCTGAATCAAATCGCGGT 59.689 43.478 27.06 0.00 40.42 5.68
721 722 3.310774 AGATTCTGAATCAAATCGCGGTG 59.689 43.478 27.06 2.23 40.42 4.94
722 723 0.726827 TCTGAATCAAATCGCGGTGC 59.273 50.000 6.13 0.00 0.00 5.01
723 724 0.248215 CTGAATCAAATCGCGGTGCC 60.248 55.000 6.13 0.00 0.00 5.01
724 725 1.297598 GAATCAAATCGCGGTGCCG 60.298 57.895 6.13 6.22 43.09 5.69
725 726 2.646799 GAATCAAATCGCGGTGCCGG 62.647 60.000 6.13 0.00 40.19 6.13
726 727 3.969250 ATCAAATCGCGGTGCCGGT 62.969 57.895 6.13 0.00 40.19 5.28
727 728 2.581208 ATCAAATCGCGGTGCCGGTA 62.581 55.000 6.13 0.00 40.19 4.02
728 729 2.510691 AAATCGCGGTGCCGGTAG 60.511 61.111 6.13 0.00 40.19 3.18
729 730 4.524318 AATCGCGGTGCCGGTAGG 62.524 66.667 6.13 0.00 40.19 3.18
752 753 0.035439 TGGCCTCTCCGATGAAAACC 60.035 55.000 3.32 0.00 37.80 3.27
753 754 0.253327 GGCCTCTCCGATGAAAACCT 59.747 55.000 0.00 0.00 0.00 3.50
761 762 1.202348 CCGATGAAAACCTCCAAAGCC 59.798 52.381 0.00 0.00 0.00 4.35
791 792 3.549299 AAGTGAAAAAGAGCTGCATCG 57.451 42.857 1.02 0.00 0.00 3.84
795 796 0.110056 AAAAAGAGCTGCATCGCACG 60.110 50.000 1.02 0.00 33.79 5.34
817 818 1.740296 ACGATTTCGGGAAGGTGCG 60.740 57.895 4.84 0.00 44.95 5.34
849 850 1.463674 CATTTTGTCTTCCCCCGAGG 58.536 55.000 0.00 0.00 0.00 4.63
867 875 1.724582 GGCCGAGAGAGAGAGCAGAC 61.725 65.000 0.00 0.00 0.00 3.51
869 877 1.016627 CCGAGAGAGAGAGCAGACAG 58.983 60.000 0.00 0.00 0.00 3.51
870 878 1.406751 CCGAGAGAGAGAGCAGACAGA 60.407 57.143 0.00 0.00 0.00 3.41
871 879 1.935873 CGAGAGAGAGAGCAGACAGAG 59.064 57.143 0.00 0.00 0.00 3.35
872 880 1.672881 GAGAGAGAGAGCAGACAGAGC 59.327 57.143 0.00 0.00 0.00 4.09
873 881 1.004628 AGAGAGAGAGCAGACAGAGCA 59.995 52.381 0.00 0.00 0.00 4.26
876 884 1.271934 GAGAGAGCAGACAGAGCAACA 59.728 52.381 0.00 0.00 0.00 3.33
877 885 1.901159 AGAGAGCAGACAGAGCAACAT 59.099 47.619 0.00 0.00 0.00 2.71
878 886 2.094078 AGAGAGCAGACAGAGCAACATC 60.094 50.000 0.00 0.00 0.00 3.06
879 887 0.997932 GAGCAGACAGAGCAACATCG 59.002 55.000 0.00 0.00 0.00 3.84
944 955 3.071206 TCTGGCTCTCCTCGTGGC 61.071 66.667 0.00 0.00 0.00 5.01
945 956 4.154347 CTGGCTCTCCTCGTGGCC 62.154 72.222 0.00 0.00 44.31 5.36
946 957 4.704103 TGGCTCTCCTCGTGGCCT 62.704 66.667 3.32 0.00 44.36 5.19
947 958 3.844090 GGCTCTCCTCGTGGCCTC 61.844 72.222 3.32 0.00 41.20 4.70
992 1003 4.888325 CCCTCCCCCAGATCCGCT 62.888 72.222 0.00 0.00 0.00 5.52
993 1004 3.554342 CCTCCCCCAGATCCGCTG 61.554 72.222 0.00 0.00 44.49 5.18
1550 1600 2.125350 GGTGCTCCGCTCCTTCAG 60.125 66.667 0.05 0.00 38.91 3.02
1749 1817 1.093159 CTCCTCCAACTGCTGATTGC 58.907 55.000 0.00 0.00 43.25 3.56
1845 1913 0.379669 CCATCAGCTCGTTGATTGCC 59.620 55.000 0.00 0.00 35.67 4.52
2157 2225 1.818959 TTGGGAATGCAACTGCTGGC 61.819 55.000 2.95 0.00 42.66 4.85
2320 2388 7.397221 TCATCTGTGAGAGGTAAATTTCACAT 58.603 34.615 8.44 0.00 46.07 3.21
2363 2431 5.590259 TGTCTGATTATTTAGCTTTGCCTCC 59.410 40.000 0.00 0.00 0.00 4.30
2448 2516 6.122850 TGTGATGCATTGTAGATTTGTAGC 57.877 37.500 0.00 0.00 0.00 3.58
2449 2517 5.066375 TGTGATGCATTGTAGATTTGTAGCC 59.934 40.000 0.00 0.00 0.00 3.93
2450 2518 5.066375 GTGATGCATTGTAGATTTGTAGCCA 59.934 40.000 0.00 0.00 0.00 4.75
2451 2519 5.651576 TGATGCATTGTAGATTTGTAGCCAA 59.348 36.000 0.00 0.00 0.00 4.52
2452 2520 5.309323 TGCATTGTAGATTTGTAGCCAAC 57.691 39.130 0.00 0.00 0.00 3.77
2453 2521 4.764308 TGCATTGTAGATTTGTAGCCAACA 59.236 37.500 0.00 0.00 35.88 3.33
2454 2522 5.418524 TGCATTGTAGATTTGTAGCCAACAT 59.581 36.000 0.00 0.00 38.10 2.71
2455 2523 6.601217 TGCATTGTAGATTTGTAGCCAACATA 59.399 34.615 0.00 0.00 38.10 2.29
2456 2524 7.134815 GCATTGTAGATTTGTAGCCAACATAG 58.865 38.462 0.00 0.00 38.10 2.23
2457 2525 7.201732 GCATTGTAGATTTGTAGCCAACATAGT 60.202 37.037 0.00 0.00 38.10 2.12
2458 2526 8.677300 CATTGTAGATTTGTAGCCAACATAGTT 58.323 33.333 0.00 0.00 38.10 2.24
2459 2527 8.630054 TTGTAGATTTGTAGCCAACATAGTTT 57.370 30.769 0.00 0.00 38.10 2.66
2460 2528 9.727859 TTGTAGATTTGTAGCCAACATAGTTTA 57.272 29.630 0.00 0.00 38.10 2.01
2466 2534 5.622180 TGTAGCCAACATAGTTTACCAACA 58.378 37.500 0.00 0.00 31.80 3.33
2538 2606 8.625786 AGGTTTACCTCGTGTTAATATTTTGT 57.374 30.769 0.00 0.00 44.77 2.83
2630 2698 2.096218 GTGAAGCACTTGTTTCGGCTAG 60.096 50.000 1.96 0.00 37.97 3.42
2632 2700 3.243941 TGAAGCACTTGTTTCGGCTAGTA 60.244 43.478 1.96 0.00 37.97 1.82
2633 2701 3.611766 AGCACTTGTTTCGGCTAGTAT 57.388 42.857 0.00 0.00 34.25 2.12
2634 2702 4.730949 AGCACTTGTTTCGGCTAGTATA 57.269 40.909 0.00 0.00 34.25 1.47
2715 2785 6.042638 ACATTGCTAGACTGAGTGTACAAT 57.957 37.500 0.00 0.00 0.00 2.71
2829 2899 4.583871 AGTTTGAACAGGCTCCTAGATTG 58.416 43.478 0.00 0.00 0.00 2.67
2869 2939 5.642919 TGTGTTTGGTGTTCGTTACTTAAGT 59.357 36.000 13.68 13.68 0.00 2.24
3110 3180 5.180304 GGTGTCAATTCTTCTTCTGAGTTCC 59.820 44.000 0.00 0.00 0.00 3.62
3153 3223 2.096248 TGACCAAGTTGAAACCCACAC 58.904 47.619 3.87 0.00 0.00 3.82
3220 3290 2.684881 GCTAGCTTTCTTTGCTATGCCA 59.315 45.455 7.70 0.00 41.45 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.805945 GCACGACGATGACCCAGAC 60.806 63.158 0.00 0.00 0.00 3.51
1 2 1.934220 GAGCACGACGATGACCCAGA 61.934 60.000 0.00 0.00 0.00 3.86
2 3 1.517257 GAGCACGACGATGACCCAG 60.517 63.158 0.00 0.00 0.00 4.45
3 4 2.571757 GAGCACGACGATGACCCA 59.428 61.111 0.00 0.00 0.00 4.51
4 5 2.202756 GGAGCACGACGATGACCC 60.203 66.667 0.00 0.00 0.00 4.46
5 6 1.805945 GTGGAGCACGACGATGACC 60.806 63.158 0.00 4.82 0.00 4.02
6 7 1.805945 GGTGGAGCACGACGATGAC 60.806 63.158 0.00 0.00 34.83 3.06
7 8 2.571757 GGTGGAGCACGACGATGA 59.428 61.111 0.00 0.00 34.83 2.92
8 9 2.507110 AAGGGTGGAGCACGACGATG 62.507 60.000 0.00 0.00 34.83 3.84
9 10 2.283529 AAGGGTGGAGCACGACGAT 61.284 57.895 0.00 0.00 34.83 3.73
10 11 2.915659 AAGGGTGGAGCACGACGA 60.916 61.111 0.00 0.00 34.83 4.20
11 12 2.738521 CAAGGGTGGAGCACGACG 60.739 66.667 0.00 0.00 34.83 5.12
12 13 3.050275 GCAAGGGTGGAGCACGAC 61.050 66.667 0.00 0.00 34.83 4.34
13 14 3.240134 GAGCAAGGGTGGAGCACGA 62.240 63.158 0.00 0.00 34.83 4.35
14 15 2.743928 GAGCAAGGGTGGAGCACG 60.744 66.667 0.00 0.00 34.83 5.34
15 16 2.360475 GGAGCAAGGGTGGAGCAC 60.360 66.667 0.00 0.00 0.00 4.40
16 17 2.233566 ATGGAGCAAGGGTGGAGCA 61.234 57.895 0.00 0.00 0.00 4.26
17 18 1.751927 CATGGAGCAAGGGTGGAGC 60.752 63.158 0.00 0.00 0.00 4.70
18 19 0.393537 GACATGGAGCAAGGGTGGAG 60.394 60.000 0.00 0.00 0.00 3.86
19 20 0.842030 AGACATGGAGCAAGGGTGGA 60.842 55.000 0.00 0.00 0.00 4.02
20 21 0.679002 CAGACATGGAGCAAGGGTGG 60.679 60.000 0.00 0.00 0.00 4.61
21 22 1.310933 GCAGACATGGAGCAAGGGTG 61.311 60.000 0.00 0.00 0.00 4.61
22 23 1.001641 GCAGACATGGAGCAAGGGT 60.002 57.895 0.00 0.00 0.00 4.34
23 24 2.110967 CGCAGACATGGAGCAAGGG 61.111 63.158 0.00 0.00 0.00 3.95
24 25 2.110967 CCGCAGACATGGAGCAAGG 61.111 63.158 0.00 0.00 0.00 3.61
25 26 1.364626 GACCGCAGACATGGAGCAAG 61.365 60.000 0.00 0.00 0.00 4.01
26 27 1.375908 GACCGCAGACATGGAGCAA 60.376 57.895 0.00 0.00 0.00 3.91
27 28 2.265739 GACCGCAGACATGGAGCA 59.734 61.111 0.00 0.00 0.00 4.26
28 29 2.887568 CGACCGCAGACATGGAGC 60.888 66.667 0.00 0.00 0.00 4.70
29 30 1.807165 CACGACCGCAGACATGGAG 60.807 63.158 0.00 0.00 0.00 3.86
30 31 2.261361 CACGACCGCAGACATGGA 59.739 61.111 0.00 0.00 0.00 3.41
31 32 2.578163 ATCCACGACCGCAGACATGG 62.578 60.000 0.00 0.00 0.00 3.66
32 33 1.153568 ATCCACGACCGCAGACATG 60.154 57.895 0.00 0.00 0.00 3.21
33 34 1.153568 CATCCACGACCGCAGACAT 60.154 57.895 0.00 0.00 0.00 3.06
34 35 2.094757 AACATCCACGACCGCAGACA 62.095 55.000 0.00 0.00 0.00 3.41
35 36 1.374252 AACATCCACGACCGCAGAC 60.374 57.895 0.00 0.00 0.00 3.51
36 37 1.374125 CAACATCCACGACCGCAGA 60.374 57.895 0.00 0.00 0.00 4.26
37 38 1.626654 GACAACATCCACGACCGCAG 61.627 60.000 0.00 0.00 0.00 5.18
38 39 1.666553 GACAACATCCACGACCGCA 60.667 57.895 0.00 0.00 0.00 5.69
39 40 2.726691 CGACAACATCCACGACCGC 61.727 63.158 0.00 0.00 0.00 5.68
40 41 1.342082 GACGACAACATCCACGACCG 61.342 60.000 0.00 0.00 0.00 4.79
41 42 1.342082 CGACGACAACATCCACGACC 61.342 60.000 0.00 0.00 0.00 4.79
42 43 0.386352 TCGACGACAACATCCACGAC 60.386 55.000 0.00 0.00 0.00 4.34
43 44 0.109919 CTCGACGACAACATCCACGA 60.110 55.000 0.00 0.00 32.84 4.35
44 45 0.386858 ACTCGACGACAACATCCACG 60.387 55.000 0.00 0.00 0.00 4.94
45 46 2.248487 GTACTCGACGACAACATCCAC 58.752 52.381 0.00 0.00 0.00 4.02
46 47 1.881324 TGTACTCGACGACAACATCCA 59.119 47.619 0.00 0.00 0.00 3.41
47 48 2.248487 GTGTACTCGACGACAACATCC 58.752 52.381 9.91 0.00 0.00 3.51
48 49 1.903139 CGTGTACTCGACGACAACATC 59.097 52.381 11.77 4.87 39.21 3.06
49 50 1.400629 CCGTGTACTCGACGACAACAT 60.401 52.381 18.29 0.00 39.21 2.71
50 51 0.041047 CCGTGTACTCGACGACAACA 60.041 55.000 18.29 0.00 39.21 3.33
51 52 0.235665 TCCGTGTACTCGACGACAAC 59.764 55.000 18.29 0.00 39.21 3.32
52 53 0.235665 GTCCGTGTACTCGACGACAA 59.764 55.000 18.29 0.00 39.21 3.18
53 54 1.862123 GTCCGTGTACTCGACGACA 59.138 57.895 18.29 0.00 39.21 4.35
54 55 1.225583 CGTCCGTGTACTCGACGAC 60.226 63.158 24.38 19.21 39.21 4.34
55 56 3.015293 GCGTCCGTGTACTCGACGA 62.015 63.158 28.78 15.30 39.21 4.20
56 57 2.572647 GCGTCCGTGTACTCGACG 60.573 66.667 24.36 24.36 37.39 5.12
57 58 2.202401 GGCGTCCGTGTACTCGAC 60.202 66.667 18.29 12.67 0.00 4.20
58 59 3.434319 GGGCGTCCGTGTACTCGA 61.434 66.667 18.29 2.56 0.00 4.04
59 60 3.392595 GAGGGCGTCCGTGTACTCG 62.393 68.421 10.28 10.28 38.33 4.18
60 61 2.488820 GAGGGCGTCCGTGTACTC 59.511 66.667 0.00 0.00 38.33 2.59
61 62 3.437795 CGAGGGCGTCCGTGTACT 61.438 66.667 0.00 0.00 38.33 2.73
72 73 1.009900 CGACGACATCTACGAGGGC 60.010 63.158 0.00 0.00 34.70 5.19
73 74 1.009900 GCGACGACATCTACGAGGG 60.010 63.158 0.00 0.00 34.70 4.30
74 75 1.215244 TAGCGACGACATCTACGAGG 58.785 55.000 0.00 0.00 34.70 4.63
75 76 2.284684 ACTTAGCGACGACATCTACGAG 59.715 50.000 0.00 0.00 34.70 4.18
76 77 2.274437 ACTTAGCGACGACATCTACGA 58.726 47.619 0.00 0.00 34.70 3.43
77 78 2.733820 ACTTAGCGACGACATCTACG 57.266 50.000 0.00 0.00 0.00 3.51
78 79 3.361414 GGAACTTAGCGACGACATCTAC 58.639 50.000 0.00 0.00 0.00 2.59
79 80 2.357009 GGGAACTTAGCGACGACATCTA 59.643 50.000 0.00 0.00 0.00 1.98
80 81 1.134560 GGGAACTTAGCGACGACATCT 59.865 52.381 0.00 0.00 0.00 2.90
81 82 1.134560 AGGGAACTTAGCGACGACATC 59.865 52.381 0.00 0.00 37.44 3.06
82 83 1.135083 CAGGGAACTTAGCGACGACAT 60.135 52.381 0.00 0.00 40.21 3.06
83 84 0.242825 CAGGGAACTTAGCGACGACA 59.757 55.000 0.00 0.00 40.21 4.35
84 85 0.243095 ACAGGGAACTTAGCGACGAC 59.757 55.000 0.00 0.00 40.21 4.34
85 86 0.524862 GACAGGGAACTTAGCGACGA 59.475 55.000 0.00 0.00 40.21 4.20
86 87 0.526662 AGACAGGGAACTTAGCGACG 59.473 55.000 0.00 0.00 40.21 5.12
87 88 1.819903 AGAGACAGGGAACTTAGCGAC 59.180 52.381 0.00 0.00 40.21 5.19
88 89 2.093106 GAGAGACAGGGAACTTAGCGA 58.907 52.381 0.00 0.00 40.21 4.93
89 90 1.819288 TGAGAGACAGGGAACTTAGCG 59.181 52.381 0.00 0.00 40.21 4.26
90 91 2.093921 GGTGAGAGACAGGGAACTTAGC 60.094 54.545 0.00 0.00 40.21 3.09
91 92 2.164624 CGGTGAGAGACAGGGAACTTAG 59.835 54.545 0.00 0.00 40.21 2.18
92 93 2.168496 CGGTGAGAGACAGGGAACTTA 58.832 52.381 0.00 0.00 40.21 2.24
93 94 0.969894 CGGTGAGAGACAGGGAACTT 59.030 55.000 0.00 0.00 40.21 2.66
94 95 1.536943 GCGGTGAGAGACAGGGAACT 61.537 60.000 0.00 0.00 46.44 3.01
95 96 1.079750 GCGGTGAGAGACAGGGAAC 60.080 63.158 0.00 0.00 0.00 3.62
96 97 2.283529 GGCGGTGAGAGACAGGGAA 61.284 63.158 0.00 0.00 0.00 3.97
97 98 2.680352 GGCGGTGAGAGACAGGGA 60.680 66.667 0.00 0.00 0.00 4.20
98 99 2.997315 TGGCGGTGAGAGACAGGG 60.997 66.667 0.00 0.00 0.00 4.45
99 100 2.575993 CTGGCGGTGAGAGACAGG 59.424 66.667 0.00 0.00 0.00 4.00
100 101 2.125753 GCTGGCGGTGAGAGACAG 60.126 66.667 0.00 0.00 0.00 3.51
101 102 2.285773 ATGCTGGCGGTGAGAGACA 61.286 57.895 0.00 0.00 0.00 3.41
102 103 1.812922 CATGCTGGCGGTGAGAGAC 60.813 63.158 0.00 0.00 0.00 3.36
103 104 2.580815 CATGCTGGCGGTGAGAGA 59.419 61.111 0.00 0.00 0.00 3.10
104 105 2.321263 ATCCATGCTGGCGGTGAGAG 62.321 60.000 0.00 0.00 37.47 3.20
105 106 2.369633 ATCCATGCTGGCGGTGAGA 61.370 57.895 0.00 0.00 37.47 3.27
106 107 2.184830 CATCCATGCTGGCGGTGAG 61.185 63.158 0.00 0.00 37.47 3.51
107 108 1.986632 ATCATCCATGCTGGCGGTGA 61.987 55.000 0.00 0.00 37.47 4.02
108 109 0.250424 TATCATCCATGCTGGCGGTG 60.250 55.000 0.00 0.00 37.47 4.94
109 110 0.250467 GTATCATCCATGCTGGCGGT 60.250 55.000 0.00 0.00 37.47 5.68
110 111 0.957395 GGTATCATCCATGCTGGCGG 60.957 60.000 0.00 0.00 37.47 6.13
111 112 0.035881 AGGTATCATCCATGCTGGCG 59.964 55.000 0.00 0.00 37.47 5.69
112 113 1.818642 GAGGTATCATCCATGCTGGC 58.181 55.000 0.00 0.00 37.47 4.85
113 114 1.338484 CCGAGGTATCATCCATGCTGG 60.338 57.143 0.00 0.00 39.43 4.85
114 115 1.943046 GCCGAGGTATCATCCATGCTG 60.943 57.143 0.00 0.00 0.00 4.41
115 116 0.322975 GCCGAGGTATCATCCATGCT 59.677 55.000 0.00 0.00 0.00 3.79
116 117 1.016130 CGCCGAGGTATCATCCATGC 61.016 60.000 0.00 0.00 0.00 4.06
117 118 0.390340 CCGCCGAGGTATCATCCATG 60.390 60.000 0.00 0.00 34.51 3.66
118 119 0.541998 TCCGCCGAGGTATCATCCAT 60.542 55.000 0.00 0.00 41.99 3.41
119 120 1.152631 TCCGCCGAGGTATCATCCA 60.153 57.895 0.00 0.00 41.99 3.41
120 121 1.179814 ACTCCGCCGAGGTATCATCC 61.180 60.000 7.01 0.00 40.77 3.51
121 122 0.674534 AACTCCGCCGAGGTATCATC 59.325 55.000 7.01 0.00 40.77 2.92
122 123 1.120530 AAACTCCGCCGAGGTATCAT 58.879 50.000 7.01 0.00 40.77 2.45
123 124 0.174845 CAAACTCCGCCGAGGTATCA 59.825 55.000 7.01 0.00 40.77 2.15
124 125 0.175073 ACAAACTCCGCCGAGGTATC 59.825 55.000 7.01 0.00 40.77 2.24
125 126 0.175073 GACAAACTCCGCCGAGGTAT 59.825 55.000 7.01 0.00 40.77 2.73
126 127 1.588082 GACAAACTCCGCCGAGGTA 59.412 57.895 7.01 0.00 40.77 3.08
127 128 2.342648 GACAAACTCCGCCGAGGT 59.657 61.111 7.01 0.00 40.77 3.85
128 129 2.809601 CGACAAACTCCGCCGAGG 60.810 66.667 7.01 0.00 40.77 4.63
129 130 2.809601 CCGACAAACTCCGCCGAG 60.810 66.667 0.09 0.09 42.32 4.63
130 131 4.367023 CCCGACAAACTCCGCCGA 62.367 66.667 0.00 0.00 0.00 5.54
132 133 4.324991 ACCCCGACAAACTCCGCC 62.325 66.667 0.00 0.00 0.00 6.13
133 134 2.741211 GACCCCGACAAACTCCGC 60.741 66.667 0.00 0.00 0.00 5.54
134 135 1.019278 CATGACCCCGACAAACTCCG 61.019 60.000 0.00 0.00 0.00 4.63
135 136 0.036306 ACATGACCCCGACAAACTCC 59.964 55.000 0.00 0.00 0.00 3.85
136 137 1.439679 GACATGACCCCGACAAACTC 58.560 55.000 0.00 0.00 0.00 3.01
137 138 0.036306 GGACATGACCCCGACAAACT 59.964 55.000 0.00 0.00 0.00 2.66
138 139 0.250553 TGGACATGACCCCGACAAAC 60.251 55.000 11.80 0.00 0.00 2.93
139 140 0.695924 ATGGACATGACCCCGACAAA 59.304 50.000 11.80 0.00 0.00 2.83
140 141 0.035534 CATGGACATGACCCCGACAA 60.036 55.000 11.80 0.00 41.20 3.18
141 142 1.601703 CATGGACATGACCCCGACA 59.398 57.895 11.80 0.00 41.20 4.35
142 143 1.153168 CCATGGACATGACCCCGAC 60.153 63.158 5.56 0.00 41.20 4.79
143 144 2.374525 CCCATGGACATGACCCCGA 61.375 63.158 15.22 0.00 41.20 5.14
144 145 2.192979 CCCATGGACATGACCCCG 59.807 66.667 15.22 2.63 41.20 5.73
145 146 1.281925 ACTCCCATGGACATGACCCC 61.282 60.000 15.22 4.37 41.20 4.95
146 147 0.625849 AACTCCCATGGACATGACCC 59.374 55.000 15.22 6.84 41.20 4.46
147 148 2.505819 ACTAACTCCCATGGACATGACC 59.494 50.000 15.22 7.32 41.20 4.02
148 149 3.914426 ACTAACTCCCATGGACATGAC 57.086 47.619 15.22 0.00 41.20 3.06
149 150 3.622206 GCAACTAACTCCCATGGACATGA 60.622 47.826 15.22 0.00 41.20 3.07
150 151 2.684881 GCAACTAACTCCCATGGACATG 59.315 50.000 15.22 5.33 38.51 3.21
151 152 2.308570 TGCAACTAACTCCCATGGACAT 59.691 45.455 15.22 0.00 0.00 3.06
152 153 1.702401 TGCAACTAACTCCCATGGACA 59.298 47.619 15.22 0.00 0.00 4.02
153 154 2.489938 TGCAACTAACTCCCATGGAC 57.510 50.000 15.22 0.00 0.00 4.02
154 155 2.290896 CCTTGCAACTAACTCCCATGGA 60.291 50.000 15.22 0.00 0.00 3.41
155 156 2.094675 CCTTGCAACTAACTCCCATGG 58.905 52.381 4.14 4.14 0.00 3.66
156 157 2.489329 CACCTTGCAACTAACTCCCATG 59.511 50.000 0.00 0.00 0.00 3.66
157 158 2.555227 CCACCTTGCAACTAACTCCCAT 60.555 50.000 0.00 0.00 0.00 4.00
158 159 1.202879 CCACCTTGCAACTAACTCCCA 60.203 52.381 0.00 0.00 0.00 4.37
159 160 1.073284 TCCACCTTGCAACTAACTCCC 59.927 52.381 0.00 0.00 0.00 4.30
160 161 2.038557 TCTCCACCTTGCAACTAACTCC 59.961 50.000 0.00 0.00 0.00 3.85
161 162 3.402628 TCTCCACCTTGCAACTAACTC 57.597 47.619 0.00 0.00 0.00 3.01
162 163 3.477530 GTTCTCCACCTTGCAACTAACT 58.522 45.455 0.00 0.00 0.00 2.24
163 164 2.223377 CGTTCTCCACCTTGCAACTAAC 59.777 50.000 0.00 0.00 0.00 2.34
164 165 2.158871 ACGTTCTCCACCTTGCAACTAA 60.159 45.455 0.00 0.00 0.00 2.24
165 166 1.414919 ACGTTCTCCACCTTGCAACTA 59.585 47.619 0.00 0.00 0.00 2.24
166 167 0.180406 ACGTTCTCCACCTTGCAACT 59.820 50.000 0.00 0.00 0.00 3.16
167 168 0.586802 GACGTTCTCCACCTTGCAAC 59.413 55.000 0.00 0.00 0.00 4.17
168 169 0.878523 CGACGTTCTCCACCTTGCAA 60.879 55.000 0.00 0.00 0.00 4.08
169 170 1.300620 CGACGTTCTCCACCTTGCA 60.301 57.895 0.00 0.00 0.00 4.08
170 171 1.282930 GACGACGTTCTCCACCTTGC 61.283 60.000 0.13 0.00 0.00 4.01
171 172 0.314302 AGACGACGTTCTCCACCTTG 59.686 55.000 0.13 0.00 0.00 3.61
172 173 1.811359 CTAGACGACGTTCTCCACCTT 59.189 52.381 0.13 0.00 0.00 3.50
173 174 1.271271 ACTAGACGACGTTCTCCACCT 60.271 52.381 0.13 0.00 0.00 4.00
174 175 1.135746 CACTAGACGACGTTCTCCACC 60.136 57.143 0.13 0.00 0.00 4.61
175 176 1.135746 CCACTAGACGACGTTCTCCAC 60.136 57.143 0.13 0.00 0.00 4.02
176 177 1.162698 CCACTAGACGACGTTCTCCA 58.837 55.000 0.13 0.00 0.00 3.86
177 178 1.446907 TCCACTAGACGACGTTCTCC 58.553 55.000 0.13 0.00 0.00 3.71
178 179 2.728535 GCTTCCACTAGACGACGTTCTC 60.729 54.545 0.13 0.00 0.00 2.87
179 180 1.199558 GCTTCCACTAGACGACGTTCT 59.800 52.381 0.13 3.58 0.00 3.01
180 181 1.615502 GCTTCCACTAGACGACGTTC 58.384 55.000 0.13 0.00 0.00 3.95
181 182 0.109873 CGCTTCCACTAGACGACGTT 60.110 55.000 0.13 0.00 0.00 3.99
182 183 1.500844 CGCTTCCACTAGACGACGT 59.499 57.895 0.00 0.00 0.00 4.34
183 184 1.226323 CCGCTTCCACTAGACGACG 60.226 63.158 0.00 0.00 0.00 5.12
184 185 0.456312 CACCGCTTCCACTAGACGAC 60.456 60.000 0.00 0.00 0.00 4.34
185 186 1.880894 CACCGCTTCCACTAGACGA 59.119 57.895 0.00 0.00 0.00 4.20
186 187 1.805945 GCACCGCTTCCACTAGACG 60.806 63.158 0.00 0.00 0.00 4.18
187 188 1.805945 CGCACCGCTTCCACTAGAC 60.806 63.158 0.00 0.00 0.00 2.59
188 189 2.571757 CGCACCGCTTCCACTAGA 59.428 61.111 0.00 0.00 0.00 2.43
206 207 2.049802 CTGCTTTGCGCTGTTGGG 60.050 61.111 9.73 0.00 40.11 4.12
207 208 2.049802 CCTGCTTTGCGCTGTTGG 60.050 61.111 9.73 0.00 40.11 3.77
208 209 0.662374 CTTCCTGCTTTGCGCTGTTG 60.662 55.000 9.73 0.00 40.11 3.33
209 210 1.103398 ACTTCCTGCTTTGCGCTGTT 61.103 50.000 9.73 0.00 40.11 3.16
210 211 1.103398 AACTTCCTGCTTTGCGCTGT 61.103 50.000 9.73 0.00 40.11 4.40
211 212 0.662374 CAACTTCCTGCTTTGCGCTG 60.662 55.000 9.73 0.00 40.11 5.18
212 213 1.656441 CAACTTCCTGCTTTGCGCT 59.344 52.632 9.73 0.00 40.11 5.92
213 214 2.018324 GCAACTTCCTGCTTTGCGC 61.018 57.895 0.00 0.00 39.34 6.09
214 215 4.233408 GCAACTTCCTGCTTTGCG 57.767 55.556 0.00 0.00 39.34 4.85
215 216 0.319297 CCTGCAACTTCCTGCTTTGC 60.319 55.000 0.00 0.00 44.84 3.68
216 217 0.319297 GCCTGCAACTTCCTGCTTTG 60.319 55.000 0.00 0.00 43.07 2.77
217 218 1.466851 GGCCTGCAACTTCCTGCTTT 61.467 55.000 0.00 0.00 43.07 3.51
218 219 1.905354 GGCCTGCAACTTCCTGCTT 60.905 57.895 0.00 0.00 43.07 3.91
219 220 2.282745 GGCCTGCAACTTCCTGCT 60.283 61.111 0.00 0.00 43.07 4.24
220 221 2.598394 TGGCCTGCAACTTCCTGC 60.598 61.111 3.32 0.00 42.95 4.85
221 222 1.975407 CCTGGCCTGCAACTTCCTG 60.975 63.158 3.32 0.00 0.00 3.86
222 223 2.134630 CTCCTGGCCTGCAACTTCCT 62.135 60.000 3.32 0.00 0.00 3.36
223 224 1.676967 CTCCTGGCCTGCAACTTCC 60.677 63.158 3.32 0.00 0.00 3.46
224 225 1.676967 CCTCCTGGCCTGCAACTTC 60.677 63.158 3.32 0.00 0.00 3.01
225 226 2.417558 GACCTCCTGGCCTGCAACTT 62.418 60.000 3.32 0.00 36.63 2.66
226 227 2.856000 ACCTCCTGGCCTGCAACT 60.856 61.111 3.32 0.00 36.63 3.16
227 228 2.360475 GACCTCCTGGCCTGCAAC 60.360 66.667 3.32 0.00 36.63 4.17
228 229 4.020617 CGACCTCCTGGCCTGCAA 62.021 66.667 3.32 0.00 36.63 4.08
234 235 2.370647 GATGTAGGCGACCTCCTGGC 62.371 65.000 1.46 0.00 37.01 4.85
235 236 1.742768 GATGTAGGCGACCTCCTGG 59.257 63.158 1.46 0.00 37.01 4.45
236 237 1.101635 TCGATGTAGGCGACCTCCTG 61.102 60.000 1.46 0.00 37.01 3.86
237 238 0.395311 TTCGATGTAGGCGACCTCCT 60.395 55.000 1.46 0.00 37.52 3.69
238 239 0.030908 CTTCGATGTAGGCGACCTCC 59.969 60.000 1.46 0.00 37.52 4.30
239 240 0.739561 ACTTCGATGTAGGCGACCTC 59.260 55.000 1.47 0.00 37.52 3.85
240 241 0.456221 CACTTCGATGTAGGCGACCT 59.544 55.000 3.33 3.87 37.52 3.85
241 242 0.527817 CCACTTCGATGTAGGCGACC 60.528 60.000 3.33 0.00 37.52 4.79
242 243 1.146358 GCCACTTCGATGTAGGCGAC 61.146 60.000 20.61 0.00 37.52 5.19
243 244 1.141019 GCCACTTCGATGTAGGCGA 59.859 57.895 20.61 0.00 35.42 5.54
244 245 3.706140 GCCACTTCGATGTAGGCG 58.294 61.111 20.61 4.91 35.42 5.52
245 246 1.009829 CAAGCCACTTCGATGTAGGC 58.990 55.000 24.43 24.43 45.54 3.93
246 247 2.544685 CTCAAGCCACTTCGATGTAGG 58.455 52.381 3.33 9.07 0.00 3.18
247 248 2.544685 CCTCAAGCCACTTCGATGTAG 58.455 52.381 3.33 0.00 0.00 2.74
248 249 1.405526 GCCTCAAGCCACTTCGATGTA 60.406 52.381 3.33 0.00 34.35 2.29
249 250 0.674895 GCCTCAAGCCACTTCGATGT 60.675 55.000 0.00 0.00 34.35 3.06
250 251 1.699656 CGCCTCAAGCCACTTCGATG 61.700 60.000 0.00 0.00 38.78 3.84
251 252 1.448540 CGCCTCAAGCCACTTCGAT 60.449 57.895 0.00 0.00 38.78 3.59
252 253 2.048222 CGCCTCAAGCCACTTCGA 60.048 61.111 0.00 0.00 38.78 3.71
253 254 1.630244 CTTCGCCTCAAGCCACTTCG 61.630 60.000 0.00 0.00 38.78 3.79
254 255 0.320771 TCTTCGCCTCAAGCCACTTC 60.321 55.000 0.00 0.00 38.78 3.01
255 256 0.108585 TTCTTCGCCTCAAGCCACTT 59.891 50.000 0.00 0.00 38.78 3.16
256 257 0.108585 TTTCTTCGCCTCAAGCCACT 59.891 50.000 0.00 0.00 38.78 4.00
257 258 0.951558 TTTTCTTCGCCTCAAGCCAC 59.048 50.000 0.00 0.00 38.78 5.01
258 259 1.608590 CTTTTTCTTCGCCTCAAGCCA 59.391 47.619 0.00 0.00 38.78 4.75
259 260 1.068264 CCTTTTTCTTCGCCTCAAGCC 60.068 52.381 0.00 0.00 38.78 4.35
260 261 1.880027 TCCTTTTTCTTCGCCTCAAGC 59.120 47.619 0.00 0.00 38.52 4.01
261 262 3.403038 TCTCCTTTTTCTTCGCCTCAAG 58.597 45.455 0.00 0.00 0.00 3.02
262 263 3.485463 TCTCCTTTTTCTTCGCCTCAA 57.515 42.857 0.00 0.00 0.00 3.02
263 264 3.007940 TGATCTCCTTTTTCTTCGCCTCA 59.992 43.478 0.00 0.00 0.00 3.86
264 265 3.600388 TGATCTCCTTTTTCTTCGCCTC 58.400 45.455 0.00 0.00 0.00 4.70
265 266 3.703001 TGATCTCCTTTTTCTTCGCCT 57.297 42.857 0.00 0.00 0.00 5.52
266 267 3.424962 CGTTGATCTCCTTTTTCTTCGCC 60.425 47.826 0.00 0.00 0.00 5.54
267 268 3.737305 CGTTGATCTCCTTTTTCTTCGC 58.263 45.455 0.00 0.00 0.00 4.70
268 269 3.186409 TGCGTTGATCTCCTTTTTCTTCG 59.814 43.478 0.00 0.00 0.00 3.79
269 270 4.467735 GTGCGTTGATCTCCTTTTTCTTC 58.532 43.478 0.00 0.00 0.00 2.87
270 271 3.058914 CGTGCGTTGATCTCCTTTTTCTT 60.059 43.478 0.00 0.00 0.00 2.52
271 272 2.480419 CGTGCGTTGATCTCCTTTTTCT 59.520 45.455 0.00 0.00 0.00 2.52
272 273 2.839474 CGTGCGTTGATCTCCTTTTTC 58.161 47.619 0.00 0.00 0.00 2.29
273 274 1.069227 GCGTGCGTTGATCTCCTTTTT 60.069 47.619 0.00 0.00 0.00 1.94
274 275 0.517316 GCGTGCGTTGATCTCCTTTT 59.483 50.000 0.00 0.00 0.00 2.27
275 276 1.626654 CGCGTGCGTTGATCTCCTTT 61.627 55.000 6.00 0.00 34.35 3.11
276 277 2.094659 CGCGTGCGTTGATCTCCTT 61.095 57.895 6.00 0.00 34.35 3.36
277 278 2.486636 TTCGCGTGCGTTGATCTCCT 62.487 55.000 14.47 0.00 40.74 3.69
278 279 1.623081 TTTCGCGTGCGTTGATCTCC 61.623 55.000 14.47 0.00 40.74 3.71
279 280 0.162933 TTTTCGCGTGCGTTGATCTC 59.837 50.000 14.47 0.00 40.74 2.75
280 281 0.163788 CTTTTCGCGTGCGTTGATCT 59.836 50.000 14.47 0.00 40.74 2.75
281 282 0.162933 TCTTTTCGCGTGCGTTGATC 59.837 50.000 14.47 0.00 40.74 2.92
282 283 0.163788 CTCTTTTCGCGTGCGTTGAT 59.836 50.000 14.47 0.00 40.74 2.57
283 284 0.872451 TCTCTTTTCGCGTGCGTTGA 60.872 50.000 14.47 7.43 40.74 3.18
284 285 0.449507 CTCTCTTTTCGCGTGCGTTG 60.450 55.000 14.47 3.58 40.74 4.10
285 286 0.874607 ACTCTCTTTTCGCGTGCGTT 60.875 50.000 14.47 0.00 40.74 4.84
286 287 1.299926 ACTCTCTTTTCGCGTGCGT 60.300 52.632 14.47 0.00 40.74 5.24
287 288 1.128611 CACTCTCTTTTCGCGTGCG 59.871 57.895 5.77 8.14 41.35 5.34
288 289 0.111089 CACACTCTCTTTTCGCGTGC 60.111 55.000 5.77 0.00 0.00 5.34
289 290 0.508641 CCACACTCTCTTTTCGCGTG 59.491 55.000 5.77 0.00 0.00 5.34
290 291 1.222115 GCCACACTCTCTTTTCGCGT 61.222 55.000 5.77 0.00 0.00 6.01
291 292 1.493311 GCCACACTCTCTTTTCGCG 59.507 57.895 0.00 0.00 0.00 5.87
292 293 1.869690 GGCCACACTCTCTTTTCGC 59.130 57.895 0.00 0.00 0.00 4.70
293 294 1.901650 GCGGCCACACTCTCTTTTCG 61.902 60.000 2.24 0.00 0.00 3.46
294 295 0.884704 TGCGGCCACACTCTCTTTTC 60.885 55.000 2.24 0.00 0.00 2.29
295 296 0.886490 CTGCGGCCACACTCTCTTTT 60.886 55.000 2.24 0.00 0.00 2.27
296 297 1.302033 CTGCGGCCACACTCTCTTT 60.302 57.895 2.24 0.00 0.00 2.52
297 298 2.345244 CTGCGGCCACACTCTCTT 59.655 61.111 2.24 0.00 0.00 2.85
298 299 2.919856 ACTGCGGCCACACTCTCT 60.920 61.111 2.24 0.00 0.00 3.10
299 300 2.433318 GACTGCGGCCACACTCTC 60.433 66.667 2.24 0.00 0.00 3.20
300 301 4.363990 CGACTGCGGCCACACTCT 62.364 66.667 2.24 0.00 0.00 3.24
327 328 1.730593 GAATCGTTCGACGCTCGTGG 61.731 60.000 0.00 0.00 42.21 4.94
328 329 1.063412 TGAATCGTTCGACGCTCGTG 61.063 55.000 0.00 0.00 42.21 4.35
329 330 0.179171 ATGAATCGTTCGACGCTCGT 60.179 50.000 10.19 0.00 42.21 4.18
330 331 0.914551 AATGAATCGTTCGACGCTCG 59.085 50.000 0.00 5.43 42.21 5.03
331 332 4.281170 GATAATGAATCGTTCGACGCTC 57.719 45.455 0.00 0.00 42.21 5.03
369 370 9.683870 ACATGCCAAAAATGGAATACAATAATT 57.316 25.926 0.00 0.00 0.00 1.40
370 371 9.111613 CACATGCCAAAAATGGAATACAATAAT 57.888 29.630 0.00 0.00 0.00 1.28
371 372 8.099537 ACACATGCCAAAAATGGAATACAATAA 58.900 29.630 0.00 0.00 0.00 1.40
372 373 7.619050 ACACATGCCAAAAATGGAATACAATA 58.381 30.769 0.00 0.00 0.00 1.90
373 374 6.474630 ACACATGCCAAAAATGGAATACAAT 58.525 32.000 0.00 0.00 0.00 2.71
374 375 5.862845 ACACATGCCAAAAATGGAATACAA 58.137 33.333 0.00 0.00 0.00 2.41
375 376 5.480642 ACACATGCCAAAAATGGAATACA 57.519 34.783 0.00 0.00 0.00 2.29
376 377 5.931146 TCAACACATGCCAAAAATGGAATAC 59.069 36.000 0.00 0.00 0.00 1.89
377 378 6.106648 TCAACACATGCCAAAAATGGAATA 57.893 33.333 0.00 0.00 0.00 1.75
378 379 4.970711 TCAACACATGCCAAAAATGGAAT 58.029 34.783 0.00 0.00 0.00 3.01
379 380 4.412796 TCAACACATGCCAAAAATGGAA 57.587 36.364 0.00 0.00 0.00 3.53
380 381 4.412796 TTCAACACATGCCAAAAATGGA 57.587 36.364 0.00 0.00 0.00 3.41
381 382 5.692613 AATTCAACACATGCCAAAAATGG 57.307 34.783 0.00 0.00 0.00 3.16
382 383 8.504815 TCAATAATTCAACACATGCCAAAAATG 58.495 29.630 0.00 0.00 0.00 2.32
383 384 8.618702 TCAATAATTCAACACATGCCAAAAAT 57.381 26.923 0.00 0.00 0.00 1.82
384 385 8.442632 TTCAATAATTCAACACATGCCAAAAA 57.557 26.923 0.00 0.00 0.00 1.94
385 386 8.618702 ATTCAATAATTCAACACATGCCAAAA 57.381 26.923 0.00 0.00 0.00 2.44
386 387 8.504815 CAATTCAATAATTCAACACATGCCAAA 58.495 29.630 0.00 0.00 32.87 3.28
387 388 7.660617 ACAATTCAATAATTCAACACATGCCAA 59.339 29.630 0.00 0.00 32.87 4.52
388 389 7.117956 CACAATTCAATAATTCAACACATGCCA 59.882 33.333 0.00 0.00 32.87 4.92
389 390 7.118101 ACACAATTCAATAATTCAACACATGCC 59.882 33.333 0.00 0.00 32.87 4.40
390 391 8.020861 ACACAATTCAATAATTCAACACATGC 57.979 30.769 0.00 0.00 32.87 4.06
420 421 2.288961 TTTAACGGCGCAACCAAAAA 57.711 40.000 10.83 0.00 39.03 1.94
421 422 2.510768 ATTTAACGGCGCAACCAAAA 57.489 40.000 10.83 3.05 39.03 2.44
422 423 2.510768 AATTTAACGGCGCAACCAAA 57.489 40.000 10.83 4.23 39.03 3.28
423 424 3.637998 TTAATTTAACGGCGCAACCAA 57.362 38.095 10.83 0.00 39.03 3.67
424 425 3.190744 TCATTAATTTAACGGCGCAACCA 59.809 39.130 10.83 0.00 39.03 3.67
425 426 3.760537 TCATTAATTTAACGGCGCAACC 58.239 40.909 10.83 0.00 0.00 3.77
426 427 5.031578 TCATCATTAATTTAACGGCGCAAC 58.968 37.500 10.83 0.00 0.00 4.17
427 428 5.236655 TCATCATTAATTTAACGGCGCAA 57.763 34.783 10.83 0.00 0.00 4.85
428 429 4.884458 TCATCATTAATTTAACGGCGCA 57.116 36.364 10.83 0.00 0.00 6.09
429 430 6.416455 TGAATTCATCATTAATTTAACGGCGC 59.584 34.615 6.90 0.00 31.50 6.53
430 431 7.906611 TGAATTCATCATTAATTTAACGGCG 57.093 32.000 4.80 4.80 31.50 6.46
431 432 8.216453 GCATGAATTCATCATTAATTTAACGGC 58.784 33.333 18.16 9.49 46.85 5.68
432 433 9.467258 AGCATGAATTCATCATTAATTTAACGG 57.533 29.630 18.16 3.44 46.85 4.44
442 443 9.695155 TCCATCATATAGCATGAATTCATCATT 57.305 29.630 18.16 9.11 46.85 2.57
444 445 7.279313 CGTCCATCATATAGCATGAATTCATCA 59.721 37.037 18.16 7.12 43.67 3.07
445 446 7.254692 CCGTCCATCATATAGCATGAATTCATC 60.255 40.741 18.16 12.66 33.61 2.92
446 447 6.541278 CCGTCCATCATATAGCATGAATTCAT 59.459 38.462 15.36 15.36 36.96 2.57
447 448 5.876460 CCGTCCATCATATAGCATGAATTCA 59.124 40.000 11.26 11.26 0.00 2.57
448 449 5.295292 CCCGTCCATCATATAGCATGAATTC 59.705 44.000 0.00 0.00 0.00 2.17
449 450 5.188434 CCCGTCCATCATATAGCATGAATT 58.812 41.667 0.00 0.00 0.00 2.17
450 451 4.774124 CCCGTCCATCATATAGCATGAAT 58.226 43.478 0.00 0.00 0.00 2.57
451 452 3.619733 GCCCGTCCATCATATAGCATGAA 60.620 47.826 0.00 0.00 0.00 2.57
452 453 2.093500 GCCCGTCCATCATATAGCATGA 60.093 50.000 0.00 0.00 0.00 3.07
453 454 2.283298 GCCCGTCCATCATATAGCATG 58.717 52.381 0.00 0.00 0.00 4.06
454 455 1.908619 TGCCCGTCCATCATATAGCAT 59.091 47.619 0.00 0.00 0.00 3.79
455 456 1.347062 TGCCCGTCCATCATATAGCA 58.653 50.000 0.00 0.00 0.00 3.49
456 457 2.093500 TCATGCCCGTCCATCATATAGC 60.093 50.000 0.00 0.00 0.00 2.97
457 458 3.893326 TCATGCCCGTCCATCATATAG 57.107 47.619 0.00 0.00 0.00 1.31
458 459 4.632327 TTTCATGCCCGTCCATCATATA 57.368 40.909 0.00 0.00 0.00 0.86
459 460 3.507162 TTTCATGCCCGTCCATCATAT 57.493 42.857 0.00 0.00 0.00 1.78
460 461 3.507162 ATTTCATGCCCGTCCATCATA 57.493 42.857 0.00 0.00 0.00 2.15
461 462 2.363038 CAATTTCATGCCCGTCCATCAT 59.637 45.455 0.00 0.00 0.00 2.45
462 463 1.750206 CAATTTCATGCCCGTCCATCA 59.250 47.619 0.00 0.00 0.00 3.07
463 464 1.536709 GCAATTTCATGCCCGTCCATC 60.537 52.381 0.00 0.00 40.49 3.51
464 465 0.461135 GCAATTTCATGCCCGTCCAT 59.539 50.000 0.00 0.00 40.49 3.41
465 466 0.897401 TGCAATTTCATGCCCGTCCA 60.897 50.000 0.00 0.00 45.83 4.02
466 467 0.461135 ATGCAATTTCATGCCCGTCC 59.539 50.000 0.00 0.00 45.83 4.79
467 468 1.563111 CATGCAATTTCATGCCCGTC 58.437 50.000 5.12 0.00 45.83 4.79
468 469 0.176219 CCATGCAATTTCATGCCCGT 59.824 50.000 12.03 0.00 45.83 5.28
469 470 0.460722 TCCATGCAATTTCATGCCCG 59.539 50.000 12.03 0.35 45.83 6.13
470 471 2.922740 ATCCATGCAATTTCATGCCC 57.077 45.000 12.03 0.00 45.83 5.36
471 472 2.798283 CGAATCCATGCAATTTCATGCC 59.202 45.455 12.03 1.58 45.83 4.40
472 473 3.708890 TCGAATCCATGCAATTTCATGC 58.291 40.909 12.03 0.00 46.58 4.06
473 474 5.177725 TCTCGAATCCATGCAATTTCATG 57.822 39.130 10.70 10.70 42.53 3.07
474 475 4.885907 ACTCTCGAATCCATGCAATTTCAT 59.114 37.500 0.00 0.00 0.00 2.57
475 476 4.264253 ACTCTCGAATCCATGCAATTTCA 58.736 39.130 0.00 0.00 0.00 2.69
476 477 4.574013 AGACTCTCGAATCCATGCAATTTC 59.426 41.667 0.00 0.00 0.00 2.17
477 478 4.334759 CAGACTCTCGAATCCATGCAATTT 59.665 41.667 0.00 0.00 0.00 1.82
478 479 3.875727 CAGACTCTCGAATCCATGCAATT 59.124 43.478 0.00 0.00 0.00 2.32
479 480 3.464907 CAGACTCTCGAATCCATGCAAT 58.535 45.455 0.00 0.00 0.00 3.56
480 481 2.419159 CCAGACTCTCGAATCCATGCAA 60.419 50.000 0.00 0.00 0.00 4.08
481 482 1.137675 CCAGACTCTCGAATCCATGCA 59.862 52.381 0.00 0.00 0.00 3.96
482 483 1.410517 TCCAGACTCTCGAATCCATGC 59.589 52.381 0.00 0.00 0.00 4.06
483 484 5.657826 ATATCCAGACTCTCGAATCCATG 57.342 43.478 0.00 0.00 0.00 3.66
484 485 7.122048 TCATATATCCAGACTCTCGAATCCAT 58.878 38.462 0.00 0.00 0.00 3.41
485 486 6.485171 TCATATATCCAGACTCTCGAATCCA 58.515 40.000 0.00 0.00 0.00 3.41
486 487 6.826231 TCTCATATATCCAGACTCTCGAATCC 59.174 42.308 0.00 0.00 0.00 3.01
487 488 7.012327 CCTCTCATATATCCAGACTCTCGAATC 59.988 44.444 0.00 0.00 0.00 2.52
488 489 6.828273 CCTCTCATATATCCAGACTCTCGAAT 59.172 42.308 0.00 0.00 0.00 3.34
489 490 6.176896 CCTCTCATATATCCAGACTCTCGAA 58.823 44.000 0.00 0.00 0.00 3.71
490 491 5.249622 ACCTCTCATATATCCAGACTCTCGA 59.750 44.000 0.00 0.00 0.00 4.04
491 492 5.353956 CACCTCTCATATATCCAGACTCTCG 59.646 48.000 0.00 0.00 0.00 4.04
492 493 6.150976 CACACCTCTCATATATCCAGACTCTC 59.849 46.154 0.00 0.00 0.00 3.20
493 494 6.009589 CACACCTCTCATATATCCAGACTCT 58.990 44.000 0.00 0.00 0.00 3.24
494 495 5.184864 CCACACCTCTCATATATCCAGACTC 59.815 48.000 0.00 0.00 0.00 3.36
495 496 5.083122 CCACACCTCTCATATATCCAGACT 58.917 45.833 0.00 0.00 0.00 3.24
496 497 4.835615 ACCACACCTCTCATATATCCAGAC 59.164 45.833 0.00 0.00 0.00 3.51
497 498 5.079998 ACCACACCTCTCATATATCCAGA 57.920 43.478 0.00 0.00 0.00 3.86
498 499 5.070981 ACAACCACACCTCTCATATATCCAG 59.929 44.000 0.00 0.00 0.00 3.86
499 500 4.968719 ACAACCACACCTCTCATATATCCA 59.031 41.667 0.00 0.00 0.00 3.41
500 501 5.511545 GGACAACCACACCTCTCATATATCC 60.512 48.000 0.00 0.00 35.97 2.59
501 502 5.542779 GGACAACCACACCTCTCATATATC 58.457 45.833 0.00 0.00 35.97 1.63
502 503 4.039245 CGGACAACCACACCTCTCATATAT 59.961 45.833 0.00 0.00 35.59 0.86
503 504 3.383505 CGGACAACCACACCTCTCATATA 59.616 47.826 0.00 0.00 35.59 0.86
504 505 2.168521 CGGACAACCACACCTCTCATAT 59.831 50.000 0.00 0.00 35.59 1.78
505 506 1.548719 CGGACAACCACACCTCTCATA 59.451 52.381 0.00 0.00 35.59 2.15
506 507 0.321671 CGGACAACCACACCTCTCAT 59.678 55.000 0.00 0.00 35.59 2.90
507 508 0.757561 TCGGACAACCACACCTCTCA 60.758 55.000 0.00 0.00 35.59 3.27
508 509 0.038159 CTCGGACAACCACACCTCTC 60.038 60.000 0.00 0.00 35.59 3.20
509 510 0.469331 TCTCGGACAACCACACCTCT 60.469 55.000 0.00 0.00 35.59 3.69
510 511 0.038159 CTCTCGGACAACCACACCTC 60.038 60.000 0.00 0.00 35.59 3.85
511 512 1.472662 CCTCTCGGACAACCACACCT 61.473 60.000 0.00 0.00 35.59 4.00
512 513 1.004918 CCTCTCGGACAACCACACC 60.005 63.158 0.00 0.00 35.59 4.16
513 514 2.046938 TCCTCTCGGACAACCACAC 58.953 57.895 0.00 0.00 33.30 3.82
514 515 4.611119 TCCTCTCGGACAACCACA 57.389 55.556 0.00 0.00 33.30 4.17
522 523 1.195115 CCCTCATTTGTCCTCTCGGA 58.805 55.000 0.00 0.00 36.83 4.55
523 524 0.179000 CCCCTCATTTGTCCTCTCGG 59.821 60.000 0.00 0.00 0.00 4.63
524 525 0.179000 CCCCCTCATTTGTCCTCTCG 59.821 60.000 0.00 0.00 0.00 4.04
525 526 0.106967 GCCCCCTCATTTGTCCTCTC 60.107 60.000 0.00 0.00 0.00 3.20
526 527 1.575447 GGCCCCCTCATTTGTCCTCT 61.575 60.000 0.00 0.00 0.00 3.69
527 528 1.076705 GGCCCCCTCATTTGTCCTC 60.077 63.158 0.00 0.00 0.00 3.71
528 529 1.224003 ATGGCCCCCTCATTTGTCCT 61.224 55.000 0.00 0.00 0.00 3.85
529 530 0.325577 AATGGCCCCCTCATTTGTCC 60.326 55.000 0.00 0.00 31.49 4.02
530 531 1.114627 GAATGGCCCCCTCATTTGTC 58.885 55.000 0.00 0.00 35.26 3.18
531 532 0.413037 TGAATGGCCCCCTCATTTGT 59.587 50.000 0.00 0.00 35.26 2.83
532 533 1.117150 CTGAATGGCCCCCTCATTTG 58.883 55.000 0.00 0.00 35.26 2.32
533 534 0.688749 GCTGAATGGCCCCCTCATTT 60.689 55.000 0.00 0.00 35.26 2.32
534 535 1.075748 GCTGAATGGCCCCCTCATT 60.076 57.895 0.00 0.00 37.52 2.57
535 536 2.318966 TGCTGAATGGCCCCCTCAT 61.319 57.895 0.00 0.00 0.00 2.90
536 537 2.940467 TGCTGAATGGCCCCCTCA 60.940 61.111 0.00 0.00 0.00 3.86
537 538 2.440980 GTGCTGAATGGCCCCCTC 60.441 66.667 0.00 0.00 0.00 4.30
538 539 2.943265 AGTGCTGAATGGCCCCCT 60.943 61.111 0.00 0.00 0.00 4.79
539 540 2.757099 CAGTGCTGAATGGCCCCC 60.757 66.667 0.00 0.00 0.00 5.40
540 541 2.757099 CCAGTGCTGAATGGCCCC 60.757 66.667 0.00 0.00 0.00 5.80
551 552 2.117941 GACACGTCCAAAGCCAGTGC 62.118 60.000 0.00 0.00 36.38 4.40
552 553 1.941812 GACACGTCCAAAGCCAGTG 59.058 57.895 0.00 0.00 38.63 3.66
553 554 4.456806 GACACGTCCAAAGCCAGT 57.543 55.556 0.00 0.00 0.00 4.00
562 563 1.227615 TGTTTTCCCGGACACGTCC 60.228 57.895 0.73 6.12 46.18 4.79
563 564 1.936658 GTGTTTTCCCGGACACGTC 59.063 57.895 0.73 0.00 37.08 4.34
564 565 4.129757 GTGTTTTCCCGGACACGT 57.870 55.556 0.73 0.00 37.08 4.49
566 567 0.030235 GCAAGTGTTTTCCCGGACAC 59.970 55.000 14.62 14.62 44.93 3.67
567 568 0.394488 TGCAAGTGTTTTCCCGGACA 60.394 50.000 0.73 0.00 0.00 4.02
568 569 0.310854 CTGCAAGTGTTTTCCCGGAC 59.689 55.000 0.73 0.00 0.00 4.79
569 570 0.181587 TCTGCAAGTGTTTTCCCGGA 59.818 50.000 0.73 0.00 33.76 5.14
570 571 0.310854 GTCTGCAAGTGTTTTCCCGG 59.689 55.000 0.00 0.00 33.76 5.73
571 572 0.041312 CGTCTGCAAGTGTTTTCCCG 60.041 55.000 0.00 0.00 33.76 5.14
572 573 1.021968 ACGTCTGCAAGTGTTTTCCC 58.978 50.000 0.00 0.00 33.76 3.97
573 574 2.844122 AACGTCTGCAAGTGTTTTCC 57.156 45.000 0.00 0.00 31.54 3.13
574 575 4.279659 CCTAAACGTCTGCAAGTGTTTTC 58.720 43.478 13.07 0.00 41.34 2.29
575 576 3.066203 CCCTAAACGTCTGCAAGTGTTTT 59.934 43.478 13.07 1.47 41.34 2.43
576 577 2.616842 CCCTAAACGTCTGCAAGTGTTT 59.383 45.455 12.61 12.61 42.74 2.83
577 578 2.218603 CCCTAAACGTCTGCAAGTGTT 58.781 47.619 0.00 0.00 35.71 3.32
578 579 1.542547 CCCCTAAACGTCTGCAAGTGT 60.543 52.381 0.00 0.00 33.76 3.55
579 580 1.156736 CCCCTAAACGTCTGCAAGTG 58.843 55.000 0.00 0.00 33.76 3.16
580 581 0.036306 CCCCCTAAACGTCTGCAAGT 59.964 55.000 0.00 0.00 33.76 3.16
581 582 1.305930 GCCCCCTAAACGTCTGCAAG 61.306 60.000 0.00 0.00 0.00 4.01
582 583 1.302993 GCCCCCTAAACGTCTGCAA 60.303 57.895 0.00 0.00 0.00 4.08
583 584 2.221299 AGCCCCCTAAACGTCTGCA 61.221 57.895 0.00 0.00 0.00 4.41
584 585 1.745489 CAGCCCCCTAAACGTCTGC 60.745 63.158 0.00 0.00 0.00 4.26
585 586 1.078426 CCAGCCCCCTAAACGTCTG 60.078 63.158 0.00 0.00 0.00 3.51
586 587 1.229400 TCCAGCCCCCTAAACGTCT 60.229 57.895 0.00 0.00 0.00 4.18
587 588 1.078637 GTCCAGCCCCCTAAACGTC 60.079 63.158 0.00 0.00 0.00 4.34
588 589 1.538135 AGTCCAGCCCCCTAAACGT 60.538 57.895 0.00 0.00 0.00 3.99
589 590 1.078426 CAGTCCAGCCCCCTAAACG 60.078 63.158 0.00 0.00 0.00 3.60
590 591 0.035343 GACAGTCCAGCCCCCTAAAC 60.035 60.000 0.00 0.00 0.00 2.01
591 592 1.205460 GGACAGTCCAGCCCCCTAAA 61.205 60.000 15.43 0.00 36.28 1.85
592 593 1.615424 GGACAGTCCAGCCCCCTAA 60.615 63.158 15.43 0.00 36.28 2.69
593 594 2.040606 GGACAGTCCAGCCCCCTA 59.959 66.667 15.43 0.00 36.28 3.53
594 595 4.270153 TGGACAGTCCAGCCCCCT 62.270 66.667 19.21 0.00 42.67 4.79
601 602 7.265599 TCTATAAAAAGGATTGGACAGTCCA 57.734 36.000 19.21 19.21 46.61 4.02
602 603 7.255277 GCATCTATAAAAAGGATTGGACAGTCC 60.255 40.741 13.35 13.35 37.47 3.85
603 604 7.500559 AGCATCTATAAAAAGGATTGGACAGTC 59.499 37.037 0.00 0.00 0.00 3.51
604 605 7.349598 AGCATCTATAAAAAGGATTGGACAGT 58.650 34.615 0.00 0.00 0.00 3.55
605 606 7.814264 AGCATCTATAAAAAGGATTGGACAG 57.186 36.000 0.00 0.00 0.00 3.51
606 607 7.807977 GAGCATCTATAAAAAGGATTGGACA 57.192 36.000 0.00 0.00 0.00 4.02
629 630 5.012664 TGTTGCCAGGAAACTCTATGTTAGA 59.987 40.000 12.00 0.00 40.21 2.10
630 631 5.122396 GTGTTGCCAGGAAACTCTATGTTAG 59.878 44.000 12.00 0.00 40.21 2.34
631 632 5.001232 GTGTTGCCAGGAAACTCTATGTTA 58.999 41.667 12.00 0.00 40.21 2.41
632 633 3.821033 GTGTTGCCAGGAAACTCTATGTT 59.179 43.478 12.00 0.00 40.21 2.71
633 634 3.073062 AGTGTTGCCAGGAAACTCTATGT 59.927 43.478 12.66 0.00 40.21 2.29
634 635 3.679389 AGTGTTGCCAGGAAACTCTATG 58.321 45.455 12.66 0.00 40.21 2.23
635 636 4.373156 AAGTGTTGCCAGGAAACTCTAT 57.627 40.909 14.38 3.94 40.21 1.98
636 637 3.857157 AAGTGTTGCCAGGAAACTCTA 57.143 42.857 14.38 0.00 40.21 2.43
637 638 2.736670 AAGTGTTGCCAGGAAACTCT 57.263 45.000 12.00 10.39 40.21 3.24
638 639 3.801114 AAAAGTGTTGCCAGGAAACTC 57.199 42.857 12.00 8.06 40.21 3.01
673 674 9.823647 TGAAATCCTAAGCTAATCAAACTCTAG 57.176 33.333 0.00 0.00 0.00 2.43
674 675 9.823647 CTGAAATCCTAAGCTAATCAAACTCTA 57.176 33.333 0.00 0.00 0.00 2.43
675 676 8.543774 TCTGAAATCCTAAGCTAATCAAACTCT 58.456 33.333 0.00 0.00 0.00 3.24
676 677 8.723942 TCTGAAATCCTAAGCTAATCAAACTC 57.276 34.615 0.00 0.00 0.00 3.01
677 678 9.692325 AATCTGAAATCCTAAGCTAATCAAACT 57.308 29.630 0.00 0.00 0.00 2.66
678 679 9.943163 GAATCTGAAATCCTAAGCTAATCAAAC 57.057 33.333 0.00 0.00 0.00 2.93
679 680 9.911788 AGAATCTGAAATCCTAAGCTAATCAAA 57.088 29.630 0.00 0.00 0.00 2.69
680 681 9.334947 CAGAATCTGAAATCCTAAGCTAATCAA 57.665 33.333 3.77 0.00 32.44 2.57
681 682 8.708378 TCAGAATCTGAAATCCTAAGCTAATCA 58.292 33.333 10.99 0.00 37.57 2.57
682 683 9.553064 TTCAGAATCTGAAATCCTAAGCTAATC 57.447 33.333 22.00 0.00 45.84 1.75
697 698 3.557185 CCGCGATTTGATTCAGAATCTGA 59.443 43.478 21.44 9.18 38.87 3.27
698 699 3.310774 ACCGCGATTTGATTCAGAATCTG 59.689 43.478 21.44 3.38 38.72 2.90
699 700 3.310774 CACCGCGATTTGATTCAGAATCT 59.689 43.478 21.44 4.12 38.72 2.40
700 701 3.611517 CACCGCGATTTGATTCAGAATC 58.388 45.455 15.39 15.39 38.40 2.52
701 702 2.223340 GCACCGCGATTTGATTCAGAAT 60.223 45.455 8.23 0.00 0.00 2.40
702 703 1.130373 GCACCGCGATTTGATTCAGAA 59.870 47.619 8.23 0.00 0.00 3.02
703 704 0.726827 GCACCGCGATTTGATTCAGA 59.273 50.000 8.23 0.00 0.00 3.27
704 705 0.248215 GGCACCGCGATTTGATTCAG 60.248 55.000 8.23 0.00 0.00 3.02
705 706 1.800032 GGCACCGCGATTTGATTCA 59.200 52.632 8.23 0.00 0.00 2.57
706 707 1.297598 CGGCACCGCGATTTGATTC 60.298 57.895 8.23 0.00 0.00 2.52
707 708 2.760159 CCGGCACCGCGATTTGATT 61.760 57.895 8.23 0.00 38.24 2.57
708 709 2.581208 TACCGGCACCGCGATTTGAT 62.581 55.000 8.23 0.00 38.24 2.57
709 710 3.298115 TACCGGCACCGCGATTTGA 62.298 57.895 8.23 0.00 38.24 2.69
710 711 2.808958 CTACCGGCACCGCGATTTG 61.809 63.158 8.23 2.28 38.24 2.32
711 712 2.510691 CTACCGGCACCGCGATTT 60.511 61.111 8.23 0.00 38.24 2.17
712 713 4.524318 CCTACCGGCACCGCGATT 62.524 66.667 8.23 0.00 38.24 3.34
730 731 2.257409 TTTCATCGGAGAGGCCAGGC 62.257 60.000 5.01 1.26 43.63 4.85
731 732 0.253044 TTTTCATCGGAGAGGCCAGG 59.747 55.000 5.01 0.00 43.63 4.45
732 733 1.373570 GTTTTCATCGGAGAGGCCAG 58.626 55.000 5.01 0.00 43.63 4.85
733 734 0.035439 GGTTTTCATCGGAGAGGCCA 60.035 55.000 5.01 0.00 43.63 5.36
734 735 0.253327 AGGTTTTCATCGGAGAGGCC 59.747 55.000 0.00 0.00 43.63 5.19
735 736 1.657822 GAGGTTTTCATCGGAGAGGC 58.342 55.000 0.00 0.00 43.63 4.70
736 737 1.555075 TGGAGGTTTTCATCGGAGAGG 59.445 52.381 0.00 0.00 43.63 3.69
737 738 3.334583 TTGGAGGTTTTCATCGGAGAG 57.665 47.619 0.00 0.00 43.63 3.20
738 739 3.674997 CTTTGGAGGTTTTCATCGGAGA 58.325 45.455 0.00 0.00 45.75 3.71
739 740 2.162408 GCTTTGGAGGTTTTCATCGGAG 59.838 50.000 0.00 0.00 0.00 4.63
740 741 2.159382 GCTTTGGAGGTTTTCATCGGA 58.841 47.619 0.00 0.00 0.00 4.55
741 742 1.202348 GGCTTTGGAGGTTTTCATCGG 59.798 52.381 0.00 0.00 0.00 4.18
742 743 1.135689 CGGCTTTGGAGGTTTTCATCG 60.136 52.381 0.00 0.00 0.00 3.84
743 744 2.159382 TCGGCTTTGGAGGTTTTCATC 58.841 47.619 0.00 0.00 0.00 2.92
744 745 2.286365 TCGGCTTTGGAGGTTTTCAT 57.714 45.000 0.00 0.00 0.00 2.57
745 746 2.060050 TTCGGCTTTGGAGGTTTTCA 57.940 45.000 0.00 0.00 0.00 2.69
752 753 7.083875 TCACTTTAATAATTCGGCTTTGGAG 57.916 36.000 0.00 0.00 0.00 3.86
753 754 7.455641 TTCACTTTAATAATTCGGCTTTGGA 57.544 32.000 0.00 0.00 0.00 3.53
761 762 8.578769 GCAGCTCTTTTTCACTTTAATAATTCG 58.421 33.333 0.00 0.00 0.00 3.34
791 792 4.160635 CCGAAATCGTGGCCGTGC 62.161 66.667 0.00 0.00 37.74 5.34
795 796 2.112815 CCTTCCCGAAATCGTGGCC 61.113 63.158 0.00 0.00 37.74 5.36
817 818 4.759205 AAATGCGGTGGAGCCCCC 62.759 66.667 0.00 0.00 36.02 5.40
828 829 0.958382 TCGGGGGAAGACAAAATGCG 60.958 55.000 0.00 0.00 0.00 4.73
849 850 1.029408 TGTCTGCTCTCTCTCTCGGC 61.029 60.000 0.00 0.00 0.00 5.54
855 856 1.545582 GTTGCTCTGTCTGCTCTCTCT 59.454 52.381 0.00 0.00 0.00 3.10
867 875 2.897436 TGAATCCTCGATGTTGCTCTG 58.103 47.619 0.00 0.00 0.00 3.35
869 877 2.611292 CCTTGAATCCTCGATGTTGCTC 59.389 50.000 0.00 0.00 0.00 4.26
870 878 2.636830 CCTTGAATCCTCGATGTTGCT 58.363 47.619 0.00 0.00 0.00 3.91
871 879 1.064654 GCCTTGAATCCTCGATGTTGC 59.935 52.381 0.00 0.00 0.00 4.17
872 880 2.353889 CTGCCTTGAATCCTCGATGTTG 59.646 50.000 0.00 0.00 0.00 3.33
873 881 2.026822 ACTGCCTTGAATCCTCGATGTT 60.027 45.455 0.00 0.00 0.00 2.71
876 884 1.745141 GCACTGCCTTGAATCCTCGAT 60.745 52.381 0.00 0.00 0.00 3.59
877 885 0.391661 GCACTGCCTTGAATCCTCGA 60.392 55.000 0.00 0.00 0.00 4.04
878 886 0.674581 TGCACTGCCTTGAATCCTCG 60.675 55.000 0.00 0.00 0.00 4.63
879 887 1.471684 CTTGCACTGCCTTGAATCCTC 59.528 52.381 0.00 0.00 0.00 3.71
921 929 0.180171 CGAGGAGAGCCAGAGAGAGA 59.820 60.000 0.00 0.00 36.29 3.10
923 931 0.393673 CACGAGGAGAGCCAGAGAGA 60.394 60.000 0.00 0.00 36.29 3.10
925 933 1.379176 CCACGAGGAGAGCCAGAGA 60.379 63.158 0.00 0.00 36.89 3.10
930 938 3.844090 GAGGCCACGAGGAGAGCC 61.844 72.222 5.01 0.00 41.13 4.70
931 939 3.844090 GGAGGCCACGAGGAGAGC 61.844 72.222 5.01 0.00 36.89 4.09
1036 1071 3.898509 CTGCTCCTCCTCCTCGCG 61.899 72.222 0.00 0.00 0.00 5.87
1725 1793 2.270527 GCAGTTGGAGGAGGAGGC 59.729 66.667 0.00 0.00 0.00 4.70
1735 1803 2.180017 GGCGCAATCAGCAGTTGG 59.820 61.111 10.83 0.00 46.13 3.77
1737 1805 2.358615 TCGGCGCAATCAGCAGTT 60.359 55.556 10.83 0.00 46.13 3.16
1749 1817 1.136774 TGAATCGTCAGACTCGGCG 59.863 57.895 0.00 0.00 0.00 6.46
2320 2388 4.704540 AGACAAATATTGGACCGAATGCAA 59.295 37.500 0.00 0.00 43.55 4.08
2363 2431 6.672147 CAAAATAAGGTTGAGTCAGTCCTTG 58.328 40.000 27.40 15.68 40.05 3.61
2448 2516 9.661563 TCTAACTATGTTGGTAAACTATGTTGG 57.338 33.333 0.00 0.00 37.19 3.77
2565 2633 8.612619 ACACACTAATTCGATGATTGGTTTATC 58.387 33.333 0.00 0.00 29.57 1.75
2829 2899 4.959596 AACACATCACTGCTGAATCATC 57.040 40.909 0.00 0.00 0.00 2.92
3110 3180 7.794349 GTCAGTCAGTTAAATTTTTGAGAGTCG 59.206 37.037 0.00 0.00 0.00 4.18
3118 3188 8.527810 TCAACTTGGTCAGTCAGTTAAATTTTT 58.472 29.630 0.00 0.00 32.94 1.94
3153 3223 5.591472 TGCTGGAAAGATGGACATTCTTATG 59.409 40.000 0.00 0.00 37.79 1.90



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.